Carg12893 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGACCACAGCCATAGCTCCTTCTTCACATCCCTCCATTTTCTTCAACCCACTTCTCAATTTCACCATTTCAAATCCCCTAATCCCCTCCAACTCGACATTTCTCTCGACCCTTGTTGCAGTTTCCGATGGATTTCGGGCTCAAACGTCGATCATTTGCGCCAGGAAGAAGAGGAGGAGACCCGTGTTTCTGAGATCGACCAAAATAGTGCTTGAATTGGCGTCTCTCTTAGCCTCCAATCTTAAGATCTTACCGCCGCCTCTGGATTTGGTCGTTGCGGAATTGAGCGGCGGAAATGGGAATGGAGGCGGTTCGCGGTTGTGGAGGAGATTTGGTGGAGGCGGCTATGATGGATGGAGAGGTAAGAGGAAGAAAACCCCATTGTTGATTGGGTTTTTGATTCTTTGTGGTCTTGCTTTGTGCGTTTTCACTGATTTTGAGCTCGATGCGATTTGTGGAGCTCTTGGATTTGCTCTATTTAGCGTTGCATTAATTCAATTGTGGCAGAGAAGTGGGATTTCGAAACATTTCGTTTGGGGATTTGGCCTTTTCGGCATTCTGATTGCCTTGGGATTGAGAAGATCTGAGGTGCAAAAATGGGCTGGAAAATTAGGGTTTTACCGTCCAAAGATGAAGAGTTTGAGAAGAAAAATTGAAGGTAAGAAAATCTTCTGA ATGCAGACCACAGCCATAGCTCCTTCTTCACATCCCTCCATTTTCTTCAACCCACTTCTCAATTTCACCATTTCAAATCCCCTAATCCCCTCCAACTCGACATTTCTCTCGACCCTTGTTGCAGTTTCCGATGGATTTCGGGCTCAAACGTCGATCATTTGCGCCAGGAAGAAGAGGAGGAGACCCGTGTTTCTGAGATCGACCAAAATAGTGCTTGAATTGGCGTCTCTCTTAGCCTCCAATCTTAAGATCTTACCGCCGCCTCTGGATTTGGTCGTTGCGGAATTGAGCGGCGGAAATGGGAATGGAGGCGGTTCGCGGTTGTGGAGGAGATTTGGTGGAGGCGGCTATGATGGATGGAGAGGTAAGAGGAAGAAAACCCCATTGTTGATTGGGTTTTTGATTCTTTGTGGTCTTGCTTTGTGCGTTTTCACTGATTTTGAGCTCGATGCGATTTGTGGAGCTCTTGGATTTGCTCTATTTAGCGTTGCATTAATTCAATTGTGGCAGAGAAGTGGGATTTCGAAACATTTCGTTTGGGGATTTGGCCTTTTCGGCATTCTGATTGCCTTGGGATTGAGAAGATCTGAGGTGCAAAAATGGGCTGGAAAATTAGGGTTTTACCGTCCAAAGATGAAGAGTTTGAGAAGAAAAATTGAAGGTAAGAAAATCTTCTGA ATGCAGACCACAGCCATAGCTCCTTCTTCACATCCCTCCATTTTCTTCAACCCACTTCTCAATTTCACCATTTCAAATCCCCTAATCCCCTCCAACTCGACATTTCTCTCGACCCTTGTTGCAGTTTCCGATGGATTTCGGGCTCAAACGTCGATCATTTGCGCCAGGAAGAAGAGGAGGAGACCCGTGTTTCTGAGATCGACCAAAATAGTGCTTGAATTGGCGTCTCTCTTAGCCTCCAATCTTAAGATCTTACCGCCGCCTCTGGATTTGGTCGTTGCGGAATTGAGCGGCGGAAATGGGAATGGAGGCGGTTCGCGGTTGTGGAGGAGATTTGGTGGAGGCGGCTATGATGGATGGAGAGGTAAGAGGAAGAAAACCCCATTGTTGATTGGGTTTTTGATTCTTTGTGGTCTTGCTTTGTGCGTTTTCACTGATTTTGAGCTCGATGCGATTTGTGGAGCTCTTGGATTTGCTCTATTTAGCGTTGCATTAATTCAATTGTGGCAGAGAAGTGGGATTTCGAAACATTTCGTTTGGGGATTTGGCCTTTTCGGCATTCTGATTGCCTTGGGATTGAGAAGATCTGAGGTGCAAAAATGGGCTGGAAAATTAGGGTTTTACCGTCCAAAGATGAAGAGTTTGAGAAGAAAAATTGAAGGTAAGAAAATCTTCTGA MQTTAIAPSSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRRRPVFLRSTKIVLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGWRGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVWGFGLFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEGKKIF
BLAST of Carg12893 vs. NCBI nr
Match: XP_022946763.1 (uncharacterized protein LOC111450736 isoform X1 [Cucurbita moschata]) HSP 1 Score: 433.3 bits (1113), Expect = 4.9e-118 Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Carg12893 vs. NCBI nr
Match: XP_023545829.1 (uncharacterized protein LOC111805147 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 422.5 bits (1085), Expect = 8.7e-115 Identity = 214/221 (96.83%), Postives = 218/221 (98.64%), Query Frame = 0
BLAST of Carg12893 vs. NCBI nr
Match: XP_022999122.1 (uncharacterized protein LOC111493602 isoform X2 [Cucurbita maxima]) HSP 1 Score: 421.0 bits (1081), Expect = 2.5e-114 Identity = 212/221 (95.93%), Postives = 219/221 (99.10%), Query Frame = 0
BLAST of Carg12893 vs. NCBI nr
Match: XP_022999121.1 (uncharacterized protein LOC111493602 isoform X1 [Cucurbita maxima]) HSP 1 Score: 420.6 bits (1080), Expect = 3.3e-114 Identity = 212/223 (95.07%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of Carg12893 vs. NCBI nr
Match: XP_022946764.1 (uncharacterized protein LOC111450736 isoform X2 [Cucurbita moschata]) HSP 1 Score: 356.7 bits (914), Expect = 5.9e-95 Identity = 191/225 (84.89%), Postives = 192/225 (85.33%), Query Frame = 0
BLAST of Carg12893 vs. TAIR10
Match: AT5G27440.1 (unknown protein) HSP 1 Score: 73.9 bits (180), Expect = 1.4e-13 Identity = 54/186 (29.03%), Postives = 94/186 (50.54%), Query Frame = 0
BLAST of Carg12893 vs. TrEMBL
Match: tr|A0A1S3C0R6|A0A1S3C0R6_CUCME (uncharacterized protein LOC103495165 OS=Cucumis melo OX=3656 GN=LOC103495165 PE=4 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 8.1e-93 Identity = 177/225 (78.67%), Postives = 196/225 (87.11%), Query Frame = 0
BLAST of Carg12893 vs. TrEMBL
Match: tr|Q84KA4|Q84KA4_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 6.8e-92 Identity = 176/225 (78.22%), Postives = 195/225 (86.67%), Query Frame = 0
BLAST of Carg12893 vs. TrEMBL
Match: tr|A0A0A0LFR0|A0A0A0LFR0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021610 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 3.8e-90 Identity = 173/225 (76.89%), Postives = 192/225 (85.33%), Query Frame = 0
BLAST of Carg12893 vs. TrEMBL
Match: tr|Q6GX33|Q6GX33_CUCME (Ctp (Fragment) OS=Cucumis melo OX=3656 GN=Ctp PE=2 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 1.1e-30 Identity = 68/89 (76.40%), Postives = 76/89 (85.39%), Query Frame = 0
BLAST of Carg12893 vs. TrEMBL
Match: tr|W9RSC8|W9RSC8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002442 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 4.8e-29 Identity = 85/220 (38.64%), Postives = 127/220 (57.73%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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