Carg11227 (gene) Silver-seed gourd

Overview
NameCarg11227
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRNA binding family protein, putative
LocationCucurbita_argyrosperma_scaffold_013 : 743497 .. 751718 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTCCATTTTTGTTCTGTTCATCTCAAATCTCTCTCCCTCAGCCATGTTCTCTGATGAAATCCGCTCTCCGTTGCGTTTCTGCGTTTAATTTCCAGCGGCTTCCTTGTTAATTGGTTTTCTCTGTCCAGTTTTCACAGGATCGGTGGAACCGGCTAGGGTTCATGGAAGCTGCAATTCGGGAGTTTAATATTTGAGGGTTTGAATATCGATTGAACTCCTGTGTTAGTGTTATTAAAATTAAGCGTTCGGGGTTCTCGATTGTGAAGCTTCGTGATAGAACGCATCCGAGATGGGTAGTGATGATCGTGTCGATGATCGGACGTTCAAGGTTGATTTCAGTGGCGAGGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGTACGGACTACCCTGGCCTTTTAACATTCATGTGCCTGGTTTTTGCGAAGCAATGTCATTGTCGGTTTTGTGACGAGTCTGCCCGGGAGTTTTAGAAATTTTTTTAGGTTATTCATGTGGAGGTCATTTTCTCCTTCATGACTGGTTGTTGGGGAATTTGTTTGGTTGAAGAAATGGAAATGTAGGATTCGCGGGTTGTTATATATTTGTAGAGGCAAGAAATTGAGATTGAGCTAATTGGACGAAAATGTTTTGTAATCTTTGCATTAGATTTCTTTGAGGGATTTATTGAGAATATCATTCTGAAAAAAGATATTGGAATACTCGTAATATCTTCCTTGAGGGTGTTTCAAGAGTTCTAAAAGGATTTAGTAGTGGTGAATCCATCAGGTTTTTGAGCTTTCTTACTTCCCAAATGTGAAATAGCTTAAATAATTTTGTCTACTCGAAATTTAGCCTCGATCTAAAGCAATCCTTGGGTGTCTCTAAGGTTGAGAACCGACCCAAACTGTTTGATATAAACTTTGCCACCTGTTATTTGAGTATGGATCCTGGATAAAGCAAGAAACGCCTTTTGAATATGTGTGGAAAGAGCTAGTGTTATAATATTCTTCTCTTCTTGACATGTCTCCTGCGAGCTATGTGGATTGTATCTTCATGTCCAAACAAATCTCTTTCCAAAATAGATCATTGAGTTGGGATTCGAGATTAATTTGAGAAGACCGTTTGCTTCAAGCAGGGAAAAGTTTTGCAAGTGGTCTAGAGCTTTGGGATCATCAAGAATTTCAGCTTTTGAAGGTTCCATCTTTTCAGCAAGCTTTTCGTTTTTTTAAATTTGCAAATCAGACCATACCTTAGCCAACCTTCAAGATTAGAGCAGTTTTCCACCAACTTTTGTAAGTCTTTGGGAAATTGCTGTGCTTGAGCCTCATATTTATGAATTTAAAAAGGGCAGGATCCCGTTTGATACCAGAAGATTTCTTGAAGGGTCATTTAGCGGTTGGAGGTAGGCATTTCAAGGTGTTTTAATTCTTCGGAGATTTAAGCGTAACCAATCATGGGAGACTAAAAATCTATCAATGAGGGACCAATCAGTCCATCTTGGATCAAGTTAACTTGGCTCTGTTATGAGGGAGGGACATCAATGAAGGAGAGGTTGTCAACAACCTCGTCAAAGAGCTTCATGCTTTTCGCAGTGAATTTCTCCCAGCTTCATTAAAAGGTATTGAAGCATCTTCCTTCTCAACTACTCAATTAGCCATAACAGAGGCACCCAAGATTTTCCAATTTCCTAAAATTGAAACCTGGATATAGACATCTGGAGAGGGGCCATAAATATTGAAAAGCCTGAAAAGAAGAAAATTAGCAGAAGAGAAATTGAACCTTTAAGAGAAAGGTTGCAGCCATAACAAAGGCGCCCAAGATTGTCCAATTCCCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCTTGAGATGGACATCTTGAGAGGGTCCGTAGATACTGAAAATTTGAAGAAGAAAAAGAAGTCCAACAAACATCTATGAGGTCTAGTTAGATTTGATAATTTTTTGGTTTGTACAAGGAAGCTATTAAAGAGTCAAGGTTTCAACTCTTAAGCTTCGCATGGAGGAGACCGCAAGTGATGTAAAGGCGGGTAATATAATTGTTTAATCATAGGAGTGACTAGGACATGATTCTTTGGGGCCTAAGGAATGGGTATTTTGTTATTGTTCGGTTATTTCTGTTTGGGGTTTGCTGTATTAACTGTTGTTAGCTGTGGGGAAAGTCATATTTCTCTTGAAACTCCCTTGGCTTTGCCAAAATAGTTAATTCATAATTCAAGATCCATCAGTATCAGTGTATCATATAAAGGGGCAACTTGAATAACACTTAGATCACAGCGAGATTTGATATAACTTCTACGACAGCCATGAGAACCAATTTTTGAAGTTTTAGTGGTAGAATTGAGAAACCTCCACATATTTAAAACGCCTACAGAGGAATCAAGACAACATTTGTTGAAGGGCACATTTATAATCTTTATCCATCCTTCATATGAACCAGATGACTAAATTCTTGGAATGCTGGAGTCCAATTTTCTTAGGCAAACAAGTCTAGCTTGGTCAATCCTTATGCACCCGAGGATGGCTCTATTACTTATACATGGTTGGGGCTAATTAGCTTTTGGAGAGACCCGGTTGTTCTTTAAGGGTTTCTTCAAACCACACTAGAGGCATTCATCTTGATAAGAAGATGTCCTCTTTAAGAAAGCATTAACCATGTTTTAGTAATCTTGCTATTTTTTTTACCTTTCTATCATCTCAATGCTATTCTTTCTTTACATTCTTTTGAAGATTACCTTTCCATGTGAACTCATTCTTCCAATTTCCATGGTTTGGAAGAGCAAAATCTTGAAGAACGCCAAATTTTATGTGTGGCAGATCCTTGTTAGCAGGGTTAATACATTGGATTGTGTTCTTAGGTTCGTGTCTAAGGTGATCAGACCCTTGTCTTACATTCTTTGTAGGCGAGTAGCCGAGGATCTAGATCATCTCATGTGGTCATGTCAGTTTGCTAGATCGGTGTAGAGCAACCTTTTTGAGTCCTCCTTCTGGTTGGTTTAGTCAAGAATTTCTAGTTCCATGCTCAAGGAATTGCTTTCCCTTCCTCCTTTCATGACAATGGTCGTTTGTTGTGGTTAGCATGTCTTAGTGGTATTCTTTTGGGAATTTGGAAAGAAAGGAACAACAAGATTTTTAGTGGAGTGGAGCAATATATGGGTGAGGTATGGTCCCTTGTTTGATTTCATACCTCGCTTTGGGTCTCTATTAGATTACCAATCAACCCAAAAGCTTAAGCTTATGGGTTTTGGTCAATTTAATGATATCAACTCTCCAACACTCCCCCTACTTGTGAGTGCCTAACAAGTGAAAATCAATAGTAATTAGGAAGAAAGCGACATTATAAGGGTTTGAACACAAGACCTCTTGCTCTAATACCATGTCTGATAACCAATTAACCAAAGATCTTGTAAATTTAATTATATTAACACTTTAAGTTTATGTTCGTAAAGACTTGTGTAATTATTCCGTAGGTCTCATTTTGTTTTTAGTGTAGCTGGGCTTTCTTTGAGTTTTTTTTAAAGTCTCTCTCTCTCTATAATATATTAGATATTAACTGGTTTTTAAAGCTGAATGCTTGAAAATTTATTTTGAGATGTTGGCATTTATTTAAGTGATGTGGTATCGCTTAGCCTTTGAATATCCATTTTTTATCACAGGTATTGCTGCATGAGATTGTGGTAACTCTCTTTACTGCATTTTAAATTTAATTAAACGTTATACTTGTGCATTTTTCATATGCATGTTTATCTGTTGCTTAAATTGCATCCATGTTTCATTTTTTTTATGACCATCATAATGTGGTTCCAAAGTATGGTATTTAGAACGTCTGTTTGAAGAATCAAGTTGTATTAAATGTAATGAATGTTCTTTGGGTAGGAATACGTGATTGTCCTGTTGAGGAACGGCAGGCGCAAAGAAGAAGCACAGAATGAACTTAATGTATTTTTGGCAGATGAGAGCCGTTCTTTTGTATCTTGGTAATTTGATTCTCATCACTCTTGTTCATATTTGTAATTTGGGTTGTAACTTGTGTCGACTCATTCTTGTAGCTAGTTGATTTAACAGTTTTATAAGCTTATTTCAACAGGCTGTGGGATCATCTGGCTTCATGTTTGGATTTATACGTGGAGCCGCCTACTAAATCTTCTGCCAATGACAATGAGGTGCCCAGAGCAAAGTCTCCTGTAGAAGAACCAGATATAAGAAATAATTCTAACAATCTGGAGTCTGATTCAGAAAGAGGGAAGTCGGAACAATTATCTAGCAGACAGCATAATAGGGAATGGAAAGGAATTGCTAATGATGAAACCCGTGTTGCTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCCAGTCACAGGAAAAGGAGCCGAGATGATGATCATCAAGGCACTGAGGTTCGTGGTCTGACTTTTCTCTTCTGATTTTTTACCTAGAAGCAGGTAACTGGGTTTTAAAATGTGAAATTTAATTTATTTTTATTTTTATTTTTTATTTTTTGAACACGTGAAATTTGAATTAGTGAAAAGCAATGGGCAAATTGGTTCGTTGAACAATATCTTGTTATTTCACAGTTTGCAATGTAATAGCTTTGCAATTTTAGGAACCCACAAATTTTTGTTTTAAACCGTATGTTTTTATGTATTAAATTTTTTAAAGTTTCTCAACTTTAAAGAAGTCCTCAATTATGGTGCCCAAGACCTATTAACCCTTATGTACGTGTTGTGTTTTTCTGACTCTGTGTGAACTCTAATTTCTTCTTCTTGCCCTGTTGATATGCTATGTTTAAATTCTGGTTCTTTTTTATATAATACATAACTATATTCAATTTTGACATTATTTGTTGGGAAAGTAATGATCAGAACTGTAGTTTAGTTTAATTCATATGAATGGATAAACCAGAAACATGAAATATTATGCTATAATTTTGCTCAATATTAGAAAACAAACAGTGTGAGGCAAACGAGTAGTGGGCAAGATGGCATGGATGCTTGTCACTGGGAGGGCACTCCATACTTTAGTTTCAATTGGGAAGTTTTTTGAATTTTTTGTAATGCACCTTTTAGTGCTCTGAGAGTTTTCTTCCTCCCTCCATTTCACTATCAATGAATTTGTTTCCCTTTCTAAAAAAGTATTCTTGATTTGTTTTTGTGACTTTTTTCTGCAATAGTTTGAATGCTCTACTAAACTACCCCAGTTTTGATATTTTTAGTAATTGGAAATAACTCGGTCCAGAATATTGGATTGTTTATTGATGCATTATTCTAATTGGAAATGAATTATGTTTTGTGTTTTACAGAGGGAGGCAGCCTTTCAGGTAAGCATTGCTGCCCCTCGGCGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACGAAGCCCTCTAATGAAGATAAGGAGACCCTTCCAAAGCGTCTTCGTTCGGTTGTTTCTGTATCCAATAGTGACACAACTAATCGTCCCAGGCGGCTTCAATCTGTTGCAAAAGTGCCAAATCCTATGGCAACTGTTATTAAGGCTGTGACTGAGGCAGCTGAAGATGTGATAAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCTTGTGATATGGATTTAACAGAGTTCAGTGGCCAAATTGCAGAATATGGAGTAACTTCTGTAGGGGATGATAAACATGGAGAACTCAATCGTACACAGGATCGACCATACTCAGCCACCTATCTCGGGAGAAGCAATTATAGTGGGAAATATGCTCCCAATGAGGGCATGTTTGAACCTGAAACTCGATTAGCATCAGATTCTATATCTGAAAATGAAGATGTTAATATTCAGGGTCACAGAGTACTTGATGATTCTTGGACTGCAGAATCAGGAGTGAGAAAGGGAGGCAATTTGCGAACTGTGCCATTCAGGGATGTCGAGAACTCTGAAGATGAACGCATGACACAATACAAACAGAAGGATCAACCTTCCTTAGTTACAAATTCCTCACGTGACATTGTAAACATCTCTGTGAATGTTAATACTTGGAAACCACCTCACTATCAGGACCCTGGGCAGATTCCTGAAGTTGGTGGTCAAAAGTTTTTGCAGGAGGGTGAGTTACAAGGTACCGGATCTGCTGTGCAAGTTACGGAGAATGGTGAGCCAGTTAATATTGTTAACCAACAGAAAAGGCCTGCAGCAAACCTTCAAAAAGAGTTCCAGAAACCTCCTGTATCTGCTAATGGTGGGCTCTCTTTTCTGGTTGCTTGCTCTACAATTTAAATGATAATTAGTTTGTACAATTCTTTTGTTTATCTCTTTTTCTTTTATTTATGAAGTTTCTCATTCTATCTTTTCCCTGTATTTGATTATCGACTATCCATTATCATTTTGGGCTCGTACTTCATTATTCTTTAGTTGGTTTTTCATTCTAAATAATTTGCTTATGTTATCTTATGCAGGCCAATTTGCTGCCTCTCGTCCTCTAGAGGATGCTGATGCTCGAACCATTTTTGTTAGCAATGTAATACGTCACTCATATGTTGCTTTTGTGAAGAACTGGGGACTGTTCATCACCTTACATTAATTTTCACGTACAGGTTCACTTTGCTGCTACAAAGGATACCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTGTAAAAGTCATCATAGTAACCGATGCAACCACTGGGCAACCCAAAGGGTAAGGCATTACAGTTCTTTATTTTTCCCCTGCTACCTCTTTTTGTTACATTGCTTTTTAACAAATTGAGTGATGCGAGTGGAGCAGGTCCGCTTATGTAGAGTTCATGAGAAAAGAATCTGCAGAGAACGCGTTGTCTCTTGACGGGACCTCGTTTATGTCTAGGATCCTGAAGGTACATGTCGTATTTCTAACATTTTTTTTTCTGTAGTATGAATCATCACCCATAGAAAGAAAAAGCGTTCGCGAACTCCCCCCTATGTGCTTAGTTTCGGTAGTTGTGTTGGTCAGTTCACAATCTCTACTGTTGTGGGCCGGTGGTATTTTTTTATTTTCTTTCTTAACTGGGTTGTTATTCAAGTATATGGTTGCTTTTTACATAATCAGTGATTTTTGCTGGTGTTTTCATGCCTAACTAAACAGAGAGCGAAAGTTAAATGAAGTTTCTGAAACCACTGAAATGGAAATGGTAGTAGACATCTAGAGGCAAACATTAAAAATGTACAGGATCCTTTCAGTCTTGGGCGTTATTTGTGCCCACCTTTTCTTTTTCTTTCATTAATCTTAACGAAAGTTTGCTTTCTCATAAAGAAAAATGTTCAAGAATCGTAGTTGCGTTAGGTTGATTTGTTCTTTCAATGGTATTTTAATATAACTTTTTCATCATGATGTGAAAACTATGAATTGATTGGAACCCACAGTTTGTTGAGGTATCTGCTGCATAATGTCGTCAACGAATAAAGCTGCATGTTCGGTTGATTTTTCATTGCAGGTCGTAAGGAAAAATAGTTCACAATTAGAAGGTGCTTCAATTGTTACCAGGCCTCGTGCTGTGCGTGGCTCGCCATTTCCTACTCCTAGATTTACCAGAGGTCCATTCCTGAGGGGCGTTCCTGGTGGACTTCGGGCTCGTCCCCCACTAAAACTTGGTGCCAGGAGCATGCAGTGGAAGCGAGATAGTCAGACCACAACTGCTGACAATGGTGCTTCTCTCTCTGGTAATTCTGTACTCTCATCTGGTGCTCGAAGTCTCACCTACGTTCGAACAGAACCTAAGCCAGCGGACAAGTAGGGGAACCACTCGATTGATAGAGCTGTTATCTCCTCAAGAAAAACTGTTCTCAAAATTATTTTGCGGAAAGAGAATCACGCAGATCAAGTATGACCTCCCCAAATTTGGTTTTGTTTTTTGTTTTGGTGGTTCATGATTCTTCGTGCATCATGGTGGAGGAAGCTGAGAAAGCAGAGACCAAGGGAATTTTCAGCAGTTTCTAGGAGAAATATTTTTTTTGTTTCCATTGGGGAATGGAAATTGGTGAGTTTATAGCTAGGAAACTCATGATGGCGGTTCAGATGGTTTCACAATTTTGAGCTCCCACCGAATTCTTATTCAGCTACTAGATTAAATTTGTGAATAGAGTAAAGAGTAGACTGTAGACCCTTTTTTTTTTTT

mRNA sequence

TTTTTCCATTTTTGTTCTGTTCATCTCAAATCTCTCTCCCTCAGCCATGTTCTCTGATGAAATCCGCTCTCCGTTGCGTTTCTGCGTTTAATTTCCAGCGGCTTCCTTGTTAATTGGTTTTCTCTGTCCAGTTTTCACAGGATCGGTGGAACCGGCTAGGGTTCATGGAAGCTGCAATTCGGGAGTTTAATATTTGAGGGTTTGAATATCGATTGAACTCCTGTGTTAGTGTTATTAAAATTAAGCGTTCGGGGTTCTCGATTGTGAAGCTTCGTGATAGAACGCATCCGAGATGGGTAGTGATGATCGTGTCGATGATCGGACGTTCAAGGTTGATTTCAGTGGCGAGGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGAATACGTGATTGTCCTGTTGAGGAACGGCAGGCGCAAAGAAGAAGCACAGAATGAACTTAATGTATTTTTGGCAGATGAGAGCCGTTCTTTTGTATCTTGGCTGTGGGATCATCTGGCTTCATGTTTGGATTTATACGTGGAGCCGCCTACTAAATCTTCTGCCAATGACAATGAGGTGCCCAGAGCAAAGTCTCCTGTAGAAGAACCAGATATAAGAAATAATTCTAACAATCTGGAGTCTGATTCAGAAAGAGGGAAGTCGGAACAATTATCTAGCAGACAGCATAATAGGGAATGGAAAGGAATTGCTAATGATGAAACCCGTGTTGCTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCCAGTCACAGGAAAAGGAGCCGAGATGATGATCATCAAGGCACTGAGAGGGAGGCAGCCTTTCAGGTAAGCATTGCTGCCCCTCGGCGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACGAAGCCCTCTAATGAAGATAAGGAGACCCTTCCAAAGCGTCTTCGTTCGGTTGTTTCTGTATCCAATAGTGACACAACTAATCGTCCCAGGCGGCTTCAATCTGTTGCAAAAGTGCCAAATCCTATGGCAACTGTTATTAAGGCTGTGACTGAGGCAGCTGAAGATGTGATAAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCTTGTGATATGGATTTAACAGAGTTCAGTGGCCAAATTGCAGAATATGGAGTAACTTCTGTAGGGGATGATAAACATGGAGAACTCAATCGTACACAGGATCGACCATACTCAGCCACCTATCTCGGGAGAAGCAATTATAGTGGGAAATATGCTCCCAATGAGGGCATGTTTGAACCTGAAACTCGATTAGCATCAGATTCTATATCTGAAAATGAAGATGTTAATATTCAGGGTCACAGAGTACTTGATGATTCTTGGACTGCAGAATCAGGAGTGAGAAAGGGAGGCAATTTGCGAACTGTGCCATTCAGGGATGTCGAGAACTCTGAAGATGAACGCATGACACAATACAAACAGAAGGATCAACCTTCCTTAGTTACAAATTCCTCACGTGACATTGTAAACATCTCTGTGAATGTTAATACTTGGAAACCACCTCACTATCAGGACCCTGGGCAGATTCCTGAAGTTGGTGGTCAAAAGTTTTTGCAGGAGGGTGAGTTACAAGGTACCGGATCTGCTGTGCAAGTTACGGAGAATGGTGAGCCAGTTAATATTGTTAACCAACAGAAAAGGCCTGCAGCAAACCTTCAAAAAGAGTTCCAGAAACCTCCTGTATCTGCTAATGGCCAATTTGCTGCCTCTCGTCCTCTAGAGGATGCTGATGCTCGAACCATTTTTGTTAGCAATGTTCACTTTGCTGCTACAAAGGATACCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTGTAAAAGTCATCATAGTAACCGATGCAACCACTGGGCAACCCAAAGGGTCCGCTTATGTAGAGTTCATGAGAAAAGAATCTGCAGAGAACGCGTTGTCTCTTGACGGGACCTCGTTTATGTCTAGGATCCTGAAGGTCGTAAGGAAAAATAGTTCACAATTAGAAGGTGCTTCAATTGTTACCAGGCCTCGTGCTGTGCGTGGCTCGCCATTTCCTACTCCTAGATTTACCAGAGGTCCATTCCTGAGGGGCGTTCCTGGTGGACTTCGGGCTCGTCCCCCACTAAAACTTGGTGCCAGGAGCATGCAGTGGAAGCGAGATAGTCAGACCACAACTGCTGACAATGGTGCTTCTCTCTCTGGTAATTCTGTACTCTCATCTGGTGCTCGAAGTCTCACCTACGTTCGAACAGAACCTAAGCCAGCGGACAAGTAGGGGAACCACTCGATTGATAGAGCTGTTATCTCCTCAAGAAAAACTGTTCTCAAAATTATTTTGCGGAAAGAGAATCACGCAGATCAAGTATGACCTCCCCAAATTTGGTTTTGTTTTTTGTTTTGGTGGTTCATGATTCTTCGTGCATCATGGTGGAGGAAGCTGAGAAAGCAGAGACCAAGGGAATTTTCAGCAGTTTCTAGGAGAAATATTTTTTTTGTTTCCATTGGGGAATGGAAATTGGTGAGTTTATAGCTAGGAAACTCATGATGGCGGTTCAGATGGTTTCACAATTTTGAGCTCCCACCGAATTCTTATTCAGCTACTAGATTAAATTTGTGAATAGAGTAAAGAGTAGACTGTAGACCCTTTTTTTTTTTT

Coding sequence (CDS)

ATGGGTAGTGATGATCGTGTCGATGATCGGACGTTCAAGGTTGATTTCAGTGGCGAGGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGAATACGTGATTGTCCTGTTGAGGAACGGCAGGCGCAAAGAAGAAGCACAGAATGAACTTAATGTATTTTTGGCAGATGAGAGCCGTTCTTTTGTATCTTGGCTGTGGGATCATCTGGCTTCATGTTTGGATTTATACGTGGAGCCGCCTACTAAATCTTCTGCCAATGACAATGAGGTGCCCAGAGCAAAGTCTCCTGTAGAAGAACCAGATATAAGAAATAATTCTAACAATCTGGAGTCTGATTCAGAAAGAGGGAAGTCGGAACAATTATCTAGCAGACAGCATAATAGGGAATGGAAAGGAATTGCTAATGATGAAACCCGTGTTGCTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCCAGTCACAGGAAAAGGAGCCGAGATGATGATCATCAAGGCACTGAGAGGGAGGCAGCCTTTCAGGTAAGCATTGCTGCCCCTCGGCGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACGAAGCCCTCTAATGAAGATAAGGAGACCCTTCCAAAGCGTCTTCGTTCGGTTGTTTCTGTATCCAATAGTGACACAACTAATCGTCCCAGGCGGCTTCAATCTGTTGCAAAAGTGCCAAATCCTATGGCAACTGTTATTAAGGCTGTGACTGAGGCAGCTGAAGATGTGATAAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCTTGTGATATGGATTTAACAGAGTTCAGTGGCCAAATTGCAGAATATGGAGTAACTTCTGTAGGGGATGATAAACATGGAGAACTCAATCGTACACAGGATCGACCATACTCAGCCACCTATCTCGGGAGAAGCAATTATAGTGGGAAATATGCTCCCAATGAGGGCATGTTTGAACCTGAAACTCGATTAGCATCAGATTCTATATCTGAAAATGAAGATGTTAATATTCAGGGTCACAGAGTACTTGATGATTCTTGGACTGCAGAATCAGGAGTGAGAAAGGGAGGCAATTTGCGAACTGTGCCATTCAGGGATGTCGAGAACTCTGAAGATGAACGCATGACACAATACAAACAGAAGGATCAACCTTCCTTAGTTACAAATTCCTCACGTGACATTGTAAACATCTCTGTGAATGTTAATACTTGGAAACCACCTCACTATCAGGACCCTGGGCAGATTCCTGAAGTTGGTGGTCAAAAGTTTTTGCAGGAGGGTGAGTTACAAGGTACCGGATCTGCTGTGCAAGTTACGGAGAATGGTGAGCCAGTTAATATTGTTAACCAACAGAAAAGGCCTGCAGCAAACCTTCAAAAAGAGTTCCAGAAACCTCCTGTATCTGCTAATGGCCAATTTGCTGCCTCTCGTCCTCTAGAGGATGCTGATGCTCGAACCATTTTTGTTAGCAATGTTCACTTTGCTGCTACAAAGGATACCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTGTAAAAGTCATCATAGTAACCGATGCAACCACTGGGCAACCCAAAGGGTCCGCTTATGTAGAGTTCATGAGAAAAGAATCTGCAGAGAACGCGTTGTCTCTTGACGGGACCTCGTTTATGTCTAGGATCCTGAAGGTCGTAAGGAAAAATAGTTCACAATTAGAAGGTGCTTCAATTGTTACCAGGCCTCGTGCTGTGCGTGGCTCGCCATTTCCTACTCCTAGATTTACCAGAGGTCCATTCCTGAGGGGCGTTCCTGGTGGACTTCGGGCTCGTCCCCCACTAAAACTTGGTGCCAGGAGCATGCAGTGGAAGCGAGATAGTCAGACCACAACTGCTGACAATGGTGCTTCTCTCTCTGGTAATTCTGTACTCTCATCTGGTGCTCGAAGTCTCACCTACGTTCGAACAGAACCTAAGCCAGCGGACAAGTAG

Protein sequence

MGSDDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVEEPDIRNNSNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSRDDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVSVSNSDTTNRPRRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTEFSGQIAEYGVTSVGDDKHGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENEDVNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDIVNISVNVNTWKPPHYQDPGQIPEVGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRPAANLQKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRPRAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNSVLSSGARSLTYVRTEPKPADK
Homology
[Close]
BLAST of Carg11227 vs. NCBI nr
Match: XP_023528108.1 (nucleolin 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1253.0 bits (3241), Expect = 0.0e+00
Identity = 674/681 (98.97%), Postives = 678/681 (99.56%), Query Frame = 0 

Query: 1   MGSDDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGS+DRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE
Sbjct: 1   MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60

Query: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVEEPDIRNN 120
           AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPR KSPVEEPDIRNN
Sbjct: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRPKSPVEEPDIRNN 120

Query: 121 SNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR 180
           SNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR
Sbjct: 121 SNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR 180

Query: 181 DDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXX 240
           DDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXX
Sbjct: 181 DDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTEFSGQIA 300
           XXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTE SGQIA
Sbjct: 241 XXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTESSGQIA 300

Query: 301 EYGVTSVGDDKHGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENED 360
           EYGVT VGDDK+GELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENED
Sbjct: 301 EYGVT-VGDDKYGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENED 360

Query: 361 VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI 420
           VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI
Sbjct: 361 VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI 420

Query: 421 VNISVNVNTWKPPHYQDPGQIPEVGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRP 480
           VNISVNVNTWKPPHYQDPGQIPE+GGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRP
Sbjct: 421 VNISVNVNTWKPPHYQDPGQIPELGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRP 480

Query: 481 AANLQKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV 540
           AANLQKEFQKPPVSANGQFAASRP+EDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV
Sbjct: 481 AANLQKEFQKPPVSANGQFAASRPVEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV 540

Query: 541 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRP 600
           IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRP
Sbjct: 541 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRP 600

Query: 601 RAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNS 660
           RAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNS
Sbjct: 601 RAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNS 660

Query: 661 VLSSGARSLTYVRTEPKPADK 682
           VLSSGARSLTYVRTEPKPADK
Sbjct: 661 VLSSGARSLTYVRTEPKPADK 680

[Close]
BLAST of Carg11227 vs. NCBI nr
Match: XP_022935152.1 (nucleolin 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1239.9 bits (3207), Expect = 0.0e+00
Identity = 667/674 (98.96%), Postives = 670/674 (99.41%), Query Frame = 0 

Query: 8   DDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELNV 67
           DDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELNV
Sbjct: 4   DDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELNV 63

Query: 68  FLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVEEPDIRNNSNNLESD 127
           FLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPV EPDIRNNSNNLESD
Sbjct: 64  FLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVVEPDIRNNSNNLESD 123

Query: 128 SERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSRDDDHQGT 187
           SERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR DDHQGT
Sbjct: 124 SERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSRADDHQGT 183

Query: 188 EREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXXXXXXXXX 247
           EREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXXXXXXXXX
Sbjct: 184 EREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXXXXXXXXX 243

Query: 248 XXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTEFSGQIAEYGVTSV 307
           XXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTE SGQIAEYGVTSV
Sbjct: 244 XXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTESSGQIAEYGVTSV 303

Query: 308 GDDKHGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENEDVNIQGHR 367
           GDD++GELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENEDVNIQGHR
Sbjct: 304 GDDEYGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENEDVNIQGHR 363

Query: 368 VLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDIVNISVNV 427
           VLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDIVNISVNV
Sbjct: 364 VLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDIVNISVNV 423

Query: 428 NTWKPPHYQDPGQIPEVGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRPAANLQKE 487
           NTWKPPHYQDPGQIPE+GGQKFLQEGELQGTGSAVQVTENGE VNIVNQQKRPAANLQKE
Sbjct: 424 NTWKPPHYQDPGQIPELGGQKFLQEGELQGTGSAVQVTENGEAVNIVNQQKRPAANLQKE 483

Query: 488 FQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVTDAT 547
           FQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVTDAT
Sbjct: 484 FQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVTDAT 543

Query: 548 TGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRPRAVRGSP 607
           TGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRPRAVRGSP
Sbjct: 544 TGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRPRAVRGSP 603

Query: 608 FPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNSVLSSGAR 667
           FPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNSVLSSGAR
Sbjct: 604 FPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNSVLSSGAR 663

Query: 668 SLTYVRTEPKPADK 682
           SLTYVRTEPKPADK
Sbjct: 664 SLTYVRTEPKPADK 677

[Close]
BLAST of Carg11227 vs. NCBI nr
Match: XP_022983276.1 (nucleolin 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1231.9 bits (3186), Expect = 0.0e+00
Identity = 662/681 (97.21%), Postives = 668/681 (98.09%), Query Frame = 0 

Query: 1   MGSDDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGS+DRVDDRTFKVDFSGEGM KLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE
Sbjct: 1   MGSEDRVDDRTFKVDFSGEGMTKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60

Query: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVEEPDIRNN 120
           AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPR KSPVEEPDIRNN
Sbjct: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRPKSPVEEPDIRNN 120

Query: 121 SNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR 180
           SNNLESDSERGKSEQLSSRQHNREWK IANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR
Sbjct: 121 SNNLESDSERGKSEQLSSRQHNREWKEIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR 180

Query: 181 DDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXX 240
            DDHQGTEREAAFQVSIAAPRRLLQFAMRDAVAT KPSNEDKETLPKRLRSVVXXXXXXX
Sbjct: 181 ADDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATMKPSNEDKETLPKRLRSVVXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTEFSGQIA 300
           XXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTE SGQIA
Sbjct: 241 XXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTESSGQIA 300

Query: 301 EYGVTSVGDDKHGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENED 360
           EYG TSVGDDK+GELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPET LASDSISENED
Sbjct: 301 EYGATSVGDDKYGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETGLASDSISENED 360

Query: 361 VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI 420
           VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI
Sbjct: 361 VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI 420

Query: 421 VNISVNVNTWKPPHYQDPGQIPEVGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRP 480
           VNISVNVNTWKP HYQDPGQIPE+GGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRP
Sbjct: 421 VNISVNVNTWKPTHYQDPGQIPELGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRP 480

Query: 481 AANLQKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV 540
            ANLQKEFQKPPVSANGQ AASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV
Sbjct: 481 TANLQKEFQKPPVSANGQIAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV 540

Query: 541 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRP 600
           IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILK+VRKN+SQL+GASIVTRP
Sbjct: 541 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKIVRKNTSQLDGASIVTRP 600

Query: 601 RAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNS 660
           RAVRGSPFPTPRFTRGPFLRGVPGGL ARPPLKLGARSMQWKRDSQ TTADNGASLSGNS
Sbjct: 601 RAVRGSPFPTPRFTRGPFLRGVPGGLGARPPLKLGARSMQWKRDSQNTTADNGASLSGNS 660

Query: 661 VLSSGARSLTYVRTEPKPADK 682
           VLSSGARSLTYVRTEPKPADK
Sbjct: 661 VLSSGARSLTYVRTEPKPADK 681

[Close]
BLAST of Carg11227 vs. NCBI nr
Match: XP_023528109.1 (uncharacterized protein LOC111791127 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1178.3 bits (3047), Expect = 0.0e+00
Identity = 647/681 (95.01%), Postives = 650/681 (95.45%), Query Frame = 0 

Query: 1   MGSDDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGS+DRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE
Sbjct: 1   MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60

Query: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVEEPDIRNN 120
           AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPR KSPVEEPDIRNN
Sbjct: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRPKSPVEEPDIRNN 120

Query: 121 SNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR 180
           SNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR
Sbjct: 121 SNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR 180

Query: 181 DDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXX 240
           DDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXX
Sbjct: 181 DDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTEFSGQIA 300
           XXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTE SGQIA
Sbjct: 241 XXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTESSGQIA 300

Query: 301 EYGVTSVGDDKHGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENED 360
           EYGVT VGDDK+GELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENED
Sbjct: 301 EYGVT-VGDDKYGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENED 360

Query: 361 VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI 420
           VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI
Sbjct: 361 VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI 420

Query: 421 VNISVNVNTWKPPHYQDPGQIPEVGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRP 480
                                       FLQEGELQGTGSAVQVTENGEPVNIVNQQKRP
Sbjct: 421 ----------------------------FLQEGELQGTGSAVQVTENGEPVNIVNQQKRP 480

Query: 481 AANLQKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV 540
           AANLQKEFQKPPVSANGQFAASRP+EDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV
Sbjct: 481 AANLQKEFQKPPVSANGQFAASRPVEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV 540

Query: 541 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRP 600
           IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRP
Sbjct: 541 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRP 600

Query: 601 RAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNS 660
           RAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNS
Sbjct: 601 RAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNS 652

Query: 661 VLSSGARSLTYVRTEPKPADK 682
           VLSSGARSLTYVRTEPKPADK
Sbjct: 661 VLSSGARSLTYVRTEPKPADK 652

[Close]
BLAST of Carg11227 vs. NCBI nr
Match: XP_022935153.1 (uncharacterized protein LOC111442109 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1165.2 bits (3013), Expect = 0.0e+00
Identity = 640/674 (94.96%), Postives = 642/674 (95.25%), Query Frame = 0 

Query: 8   DDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELNV 67
           DDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELNV
Sbjct: 4   DDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELNV 63

Query: 68  FLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVEEPDIRNNSNNLESD 127
           FLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPV EPDIRNNSNNLESD
Sbjct: 64  FLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVVEPDIRNNSNNLESD 123

Query: 128 SERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSRDDDHQGT 187
           SERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR DDHQGT
Sbjct: 124 SERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSRADDHQGT 183

Query: 188 EREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXXXXXXXXX 247
           EREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXXXXXXXXX
Sbjct: 184 EREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXXXXXXXXX 243

Query: 248 XXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTEFSGQIAEYGVTSV 307
           XXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTE SGQIAEYGVTSV
Sbjct: 244 XXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTESSGQIAEYGVTSV 303

Query: 308 GDDKHGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENEDVNIQGHR 367
           GDD++GELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENEDVNIQGHR
Sbjct: 304 GDDEYGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENEDVNIQGHR 363

Query: 368 VLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDIVNISVNV 427
           VLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI       
Sbjct: 364 VLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI------- 423

Query: 428 NTWKPPHYQDPGQIPEVGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRPAANLQKE 487
                                FLQEGELQGTGSAVQVTENGE VNIVNQQKRPAANLQKE
Sbjct: 424 ---------------------FLQEGELQGTGSAVQVTENGEAVNIVNQQKRPAANLQKE 483

Query: 488 FQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVTDAT 547
           FQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVTDAT
Sbjct: 484 FQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVTDAT 543

Query: 548 TGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRPRAVRGSP 607
           TGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRPRAVRGSP
Sbjct: 544 TGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRPRAVRGSP 603

Query: 608 FPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNSVLSSGAR 667
           FPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNSVLSSGAR
Sbjct: 604 FPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNSVLSSGAR 649

Query: 668 SLTYVRTEPKPADK 682
           SLTYVRTEPKPADK
Sbjct: 664 SLTYVRTEPKPADK 649

[Close]
BLAST of Carg11227 vs. TAIR10
Match: AT3G12640.1 (RNA binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 393.3 bits (1009), Expect = 3.1e-109
Identity = 290/697 (41.61%), Postives = 385/697 (55.24%), Query Frame = 0 

Query: 1   MGSDDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGS D VDDRTF  DFS EG+AKL+E +K K+KE+MGDYTDD LVEYVIVLLRNGRRKEE
Sbjct: 1   MGSADLVDDRTFNGDFSVEGVAKLKEMVKDKLKEYMGDYTDDILVEYVIVLLRNGRRKEE 60

Query: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLY----VEPPT-KSSANDNEVPRAKSPVEEP 120
           A NEL +FL D+S SFV+WLWDHLA  +D Y    VE  T KSS   +   +A  P    
Sbjct: 61  ANNELKIFLGDDSDSFVAWLWDHLAESVDEYFSSNVEGTTIKSSLISSHEDKALVP---- 120

Query: 121 DIRNNSNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSH 180
                   L+S+ ++G+S++ +  +  R+W+         +  + VS +      +  S 
Sbjct: 121 --------LDSEYDKGRSDKSNGARRGRQWR---------SQPTNVSEIPPLLSSEAQSQ 180

Query: 181 RKRSRDDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVV-- 240
           RKRSR DD +  +REA   VS    RRLLQFA+RDA+A ++P+N   E+  KRLRSVV  
Sbjct: 181 RKRSRTDDSRNEQREAKPDVS----RRLLQFAVRDALAISRPANSSTESSLKRLRSVVST 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSS-SVFDRLGRQSCDMDL 300
                                   ATV+KAV EAAED  + KS  SVFDR+   +     
Sbjct: 241 STQNSSDPDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRISHSTG---- 300

Query: 301 TEFSGQIAEYGVTSVGDDKHGELNRTQDR---PYSATYLGRSNYSGKYAPNEGMFEPETR 360
           +E   Q    G  S  D++    ++ Q+     Y+ +      Y      N+    P+  
Sbjct: 301 SETLDQNMVLGEVSPKDEESRNFSQGQEAVQLQYTQSLANNGVYFENMTTNDTGLNPD-- 360

Query: 361 LASDSISENEDVNIQ------GHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQ 420
            +SD       VN+       G+R+               N  ++  R V++S+  + T 
Sbjct: 361 FSSDRGRLGSSVNVSHPSTYLGNRI--------------NNPNSLQHRLVDDSKRVKGTN 420

Query: 421 YKQKDQPSLVTNSSRDIVNISVNVNTWKPPHYQDPGQIPEVGGQKFLQEGELQGTGSAVQ 480
           Y Q   P + T       + S N++T K    ++  +IP+VG Q+++ EG L  + +  Q
Sbjct: 421 Y-QNRLPEVAT--KHKTASFSGNIDTGKTVKLEEQRKIPDVGLQRYMDEGRLVSSEATTQ 480

Query: 481 V-TENGEPVNIVNQQKRPAANLQKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAA 540
           + T+      I N   +PAA++ KE      S  G  + +RPLEDA +RTIFV+NVHF A
Sbjct: 481 LSTQKILGDTIGNGNVKPAASV-KEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGA 540

Query: 541 TKDTLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILK 600
           TKD+LSRHFNKFGEV+K  IVTD  TGQP GSAY+EF RKE+AENALSLDGTSFMSRILK
Sbjct: 541 TKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILK 600

Query: 601 VVR-KNSSQLEGASIVTRPRAVRGSPFPTPRFTRGP-FLRGVPGGLRARPPLKLGARSMQ 660
           +V+  N    E AS ++  R          RFTR P + RG  G +R R  ++ G RSMQ
Sbjct: 601 IVKGSNGQNQEAASSMSWSRG--------GRFTRAPSYFRG--GAVRGRSVVRGGGRSMQ 631

Query: 661 WKRDSQTTTADNGASLSGNSVLSSGARSLTYVRTEPK 678
           WKRDS    AD G   + N+V  + ARSLTYVR E K
Sbjct: 661 WKRDS----ADTG---NNNNVAPNNARSLTYVRAESK 631

[Close]
BLAST of Carg11227 vs. TAIR10
Match: AT2G24350.1 (RNA binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 95.9 bits (237), Expect = 1.0e-19
Identity = 158/628 (25.16%), Postives = 249/628 (39.65%), Query Frame = 0 

Query: 7   VDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELN 66
           VD  TF +    E  ++L+  I   +  F  DY+DD L EYV VL+ NG+ + +A  +L 
Sbjct: 5   VDGLTFPMSRVSESASRLKTIISDMLPRFTDDYSDD-LSEYVTVLVCNGKSQRQASEDLE 64

Query: 67  VFLADESRSFVSWLWDHLASCLDLYVEPPTKSS---------ANDNEVPRAKSPVEEPDI 126
            FL ++S  FV  LW+ L      Y      +S         +ND  + +  S  +  D 
Sbjct: 65  AFLKEQSWKFVVCLWELLVK----YFSQSNSASGPKTDVDFGSNDTLIKQGLSSRKYDDY 124

Query: 127 RNNSNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRK 186
              +    +D     +EQL S         I + E  V+P+ E  ++        P  R 
Sbjct: 125 DCKA----ADGTNSMNEQLIS-----VTAPIDDIEAPVSPKVEKMKMSRQELIDSPCTRA 184

Query: 187 RSRDDDH---QGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVX 246
           R R  ++    G  R+    V ++A +   Q   R+     K  NE   TL KR  S   
Sbjct: 185 RRRKKENWNSSGYSRKVLRSVIVSATQ---QPCDRNPAKYEKSMNERSRTLKKRPYS--- 244

Query: 247 XXXXXXXXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSS----SVFDRLGRQSCDM 306
                                  A   +AV+    D    + +    SV+DRLGR S + 
Sbjct: 245 --------------PERELDSRFAPSGRAVSARYHDASLHQETEPHVSVWDRLGRASSEC 304

Query: 307 DLTEFSGQIAEYGVTSVGDDKHGELNRTQDRPYSATY---LGRSNYSGKYAPNEGMFEPE 366
            L   S  ++++G+ +     H +        YS  +     R   +  Y      F+ +
Sbjct: 305 VLDTESRTLSKFGIQTRETKVHQQHGPVFPAAYSEQHSEIFQREVLAVGYRHRVPQFDKD 364

Query: 367 TRLASDSISENEDVNIQGHRVLDDSWTAESGV--RKGGNLRTVPFRDVENSEDERMTQYK 426
            +  S++I+  E      H   + S     G+     G    VP             QYK
Sbjct: 365 RKPKSETITSTEP-----HIAYNLSRKRRYGMVSPNSGEFSYVP-------------QYK 424

Query: 427 QKDQ----PSLVTNSS--RDIVNISVNVNTWKPPHYQDPGQIPEVGGQKFLQEGELQGTG 486
           Q +Q    PSL+++ S  +DI +   NV                   ++ +QE EL+   
Sbjct: 425 QAEQDFEKPSLLSHQSTKQDIFSEIKNV-------------------KEKMQELELR--- 484

Query: 487 SAVQVTENGEPVNIVNQQKRPAANLQKEFQKPPVSANGQFAASRPLEDADARTIFVSNVH 546
                         + Q K+      +E +  P S   Q+      + +++R I V+NV+
Sbjct: 485 --------------IIQSKQLKKQKVEERKPSPQSGESQYQE----DVSESRVIHVTNVY 537

Query: 547 FAATKDTLSRHF-NKFGEVVKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMS 606
           +AA K+ +S  F +K G V  VI+VTD  T  PKG+A+V F  KES   A++L GT F S
Sbjct: 545 YAAKKEAISMFFSSKCGAVQNVIVVTDPVTRHPKGTAFVTFATKESVGKAVALSGTMFYS 537

[Close]
BLAST of Carg11227 vs. TAIR10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 71.6 bits (174), Expect = 2.1e-12
Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = 0 

Query: 506 EDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMRKESA 565
           E+ DAR++FV NV +A T + + +HF   G V +V I+TD   GQPKG AYVEF+  E+ 
Sbjct: 87  EEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTD-KFGQPKGFAYVEFVEVEAV 146

Query: 566 ENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRPRAVRGSPFPTPRFTRGPFL 620
           + AL L+ +    R LKV++K ++       + + R  R +P+   RF R PF+
Sbjct: 147 QEALQLNESELHGRQLKVLQKRTN----VPGLKQFRGRRFNPYMGYRFRR-PFM 194

[Close]
BLAST of Carg11227 vs. TAIR10
Match: AT5G51120.2 (polyadenylate-binding protein 1)

HSP 1 Score: 71.2 bits (173), Expect = 2.7e-12
Identity = 54/140 (38.57%), Postives = 82/140 (58.57%), Query Frame = 0 

Query: 484 LQKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIV 543
           L+ E++K  ++ +G  AA +  E+ D+R+I+V NV +A T + + +HF   G V +V I+
Sbjct: 117 LEFEYEKEIIN-SGVSAAEK--EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTIL 176

Query: 544 TDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRPRAV 603
           TD   GQPKG AYVEF+  E+ +N+L L+ +    R +KV  K ++ + G     R    
Sbjct: 177 TD-KFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTN-VPG----MRQFRG 236

Query: 604 RGSPFPTPRFTRGPFLRGVP 624
           RG PF   R  RG F+ GVP
Sbjct: 237 RGRPF---RPMRG-FMPGVP 243

[Close]
BLAST of Carg11227 vs. TAIR10
Match: AT5G10350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 66.6 bits (161), Expect = 6.6e-11
Identity = 51/157 (32.48%), Postives = 76/157 (48.41%), Query Frame = 0 

Query: 439 GQIPEVGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRPAANLQK-----EFQKPPV 498
           G+IPEVG                  VTE  E    + + +  AA L++     E +    
Sbjct: 11  GEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQAKVEKEMGAT 70

Query: 499 SANGQFAASRP-LEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVTDATTGQPK 558
                 AA++   E+ DAR+++V NV +A T + +  HF   G V +V I+ D   GQPK
Sbjct: 71  QDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMD-KFGQPK 130

Query: 559 GSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSS 590
           G AYVEF+  E+ + AL L+ +    R LKV  K ++
Sbjct: 131 GFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTN 166

[Close]
BLAST of Carg11227 vs. Swiss-Prot
Match: sp|Q9DDY9|PAB2A_XENLA (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.0e-13
Identity = 49/120 (40.83%), Postives = 67/120 (55.83%), Query Frame = 0 

Query: 485 QKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVT 544
           Q     PP +A     +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ 
Sbjct: 137 QMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILC 196

Query: 545 DATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTR--PRA 603
           D  TG PKG AY+EF  KES   +L+LD + F  R +KVV K +++  G S   R  PRA
Sbjct: 197 DKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQIKVVPKRTNR-PGISTTDRGFPRA 255

[Close]
BLAST of Carg11227 vs. Swiss-Prot
Match: sp|Q7ZXB8|PAB2B_XENLA (Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.0e-13
Identity = 49/120 (40.83%), Postives = 67/120 (55.83%), Query Frame = 0 

Query: 485 QKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVT 544
           Q     PP +A     +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ 
Sbjct: 136 QMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILC 195

Query: 545 DATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTR--PRA 603
           D  TG PKG AY+EF  KES   +L+LD + F  R +KVV K +++  G S   R  PRA
Sbjct: 196 DKFTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNR-PGISTTDRGFPRA 254

[Close]
BLAST of Carg11227 vs. Swiss-Prot
Match: sp|Q6NVP7|PABP2_XENTR (Polyadenylate-binding protein 2 OS=Xenopus tropicalis OX=8364 GN=pabpn1 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.0e-13
Identity = 49/120 (40.83%), Postives = 67/120 (55.83%), Query Frame = 0 

Query: 485 QKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVT 544
           Q     PP +A     +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ 
Sbjct: 137 QMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILC 196

Query: 545 DATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTR--PRA 603
           D  TG PKG AY+EF  KES   +L+LD + F  R +KVV K +++  G S   R  PRA
Sbjct: 197 DKYTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNR-PGISTTDRGFPRA 255

[Close]
BLAST of Carg11227 vs. Swiss-Prot
Match: sp|Q8CCS6|PABP2_MOUSE (Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3)

HSP 1 Score: 77.8 bits (190), Expect = 5.2e-13
Identity = 41/106 (38.68%), Postives = 61/106 (57.55%), Query Frame = 0 

Query: 485 QKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVT 544
           Q     PP +A     +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ 
Sbjct: 142 QMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILC 201

Query: 545 DATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQ 591
           D  +G PKG AY+EF  KES   +L+LD + F  R +KV+ K +++
Sbjct: 202 DKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNR 247

[Close]
BLAST of Carg11227 vs. Swiss-Prot
Match: sp|Q28165|PABP2_BOVIN (Polyadenylate-binding protein 2 OS=Bos taurus OX=9913 GN=PABPN1 PE=1 SV=3)

HSP 1 Score: 77.4 bits (189), Expect = 6.8e-13
Identity = 55/159 (34.59%), Postives = 79/159 (49.69%), Query Frame = 0 

Query: 485 QKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVT 544
           Q     PP +A     +     +ADAR+I+V NV + AT + L  HF+  G V +V I+ 
Sbjct: 146 QMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILC 205

Query: 545 DATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTR--PRA 604
           D  +G PKG AY+EF  KES   +L+LD + F  R +KV+ K +++  G S   R  PRA
Sbjct: 206 DKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRA 265

Query: 605 VRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQW 642
              +       +R  F  G     R R   +  AR+  W
Sbjct: 266 RYRARTTNYNSSRSRFYSGFNSRPRGR-VYRGRARATSW 302

[Close]
BLAST of Carg11227 vs. TrEMBL
Match: tr|A0A1S3CFE4|A0A1S3CFE4_CUCME (nucleolin 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1)

HSP 1 Score: 1077.4 bits (2785), Expect = 0.0e+00
Identity = 561/681 (82.38%), Postives = 607/681 (89.13%), Query Frame = 0 

Query: 1   MGSDDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGS+DRVDDRTFKVDF+GEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 6   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65

Query: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVEEPDIRNN 120
           AQNELNVFLAD+S SFVSWLWDHLAS +DLYVEPP KSSA  NEVPR KSPV EPD RNN
Sbjct: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSA--NEVPRPKSPVAEPDTRNN 125

Query: 121 SNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR 180
           S+NLESDSERGK+E+LSSR+ NREW+GIAN+ETRV P+SEVSRVKHSSPEQVP+HRKRSR
Sbjct: 126 SHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRKRSR 185

Query: 181 DDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXX 240
            DD QGTEREAAFQVSIAAPRRLLQFAMRDAVATT+PSN  KE   KRLRSVV       
Sbjct: 186 PDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNSDT 245

Query: 241 XXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTEFSGQIA 300
                            ATVIKAVTEA+EDV+RVKSSSVFDRLGRQS DMDLTE SG++ 
Sbjct: 246 TNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRLG 305

Query: 301 EYGVTSVGDDKHGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENED 360
           EYGVTSV +D++G++N ++DRPYSATYL RSNY GKY+ +E MFEPET LASDS SENED
Sbjct: 306 EYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASENED 365

Query: 361 VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI 420
           VNI+GHRV DDSWTAESGVRKG NLRTV FR V+NS+DER+ QY QKDQPSL  NSSRDI
Sbjct: 366 VNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSRDI 425

Query: 421 VNISVNVNTWKPPHYQDPGQIPEVGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRP 480
           VNISVNVNTWKPPHYQD GQIPE+ GQKFLQE ELQGT SAVQVTENGEPV +VNQ+K P
Sbjct: 426 VNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTP 485

Query: 481 AANLQKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV 540
           A+NLQKEFQKPP+SANGQFA++RPLE+ADARTIFVSNVHFAATKD+LSRHFNKFGEV+KV
Sbjct: 486 ASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKV 545

Query: 541 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRP 600
           IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKN+SQLEGAS VT P
Sbjct: 546 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWP 605

Query: 601 RAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNS 660
           RAVRGSPFPT RFTR PF+RGVPGG RARPP+KLGARSMQWKRD+QT TADNGASLSGNS
Sbjct: 606 RAVRGSPFPTSRFTRVPFMRGVPGGFRARPPMKLGARSMQWKRDNQTATADNGASLSGNS 665

Query: 661 VLSSGARSLTYVRTEPKPADK 682
           + S GARSLTYVRTEPKPADK
Sbjct: 666 IPSPGARSLTYVRTEPKPADK 683

[Close]
BLAST of Carg11227 vs. TrEMBL
Match: tr|A0A0A0L9I7|A0A0A0L9I7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697930 PE=4 SV=1)

HSP 1 Score: 1067.8 bits (2760), Expect = 1.0e-308
Identity = 554/681 (81.35%), Postives = 598/681 (87.81%), Query Frame = 0 

Query: 1   MGSDDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGS+DRVDDRTFKVDF+G+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 6   MGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65

Query: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVEEPDIRNN 120
           AQNELNVFLAD+S SFVSWLWDHLAS +DLYVEPP K+SA  NEVP  KSPV EPD RNN
Sbjct: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASA--NEVPTQKSPVAEPDTRNN 125

Query: 121 SNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR 180
           S+NLESDSERGK+E+LSSR+  REW+GIAN+ETRV PRSEVSRVKHSSPEQVP HRKRSR
Sbjct: 126 SHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRKRSR 185

Query: 181 DDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXX 240
            DDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATT+PSN  KE   KRLRSVV       
Sbjct: 186 PDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASNSDT 245

Query: 241 XXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTEFSGQIA 300
                            ATVIKAVTEA+EDV+RVKSSSVFDRLGRQS DMDLTE SG+ +
Sbjct: 246 TNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRPS 305

Query: 301 EYGVTSVGDDKHGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENED 360
           EYG T V +D++G++N ++DRPYSATYL R NY GKY+ +E MFEPET LASDS SENED
Sbjct: 306 EYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSENED 365

Query: 361 VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI 420
           VNIQGHRV DDSWTAESGVRKG NLRTV FR VENS+DER+ QY QKDQPSL  NSSRDI
Sbjct: 366 VNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSSRDI 425

Query: 421 VNISVNVNTWKPPHYQDPGQIPEVGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRP 480
           VNISVNVNTWKPPHYQD GQIPE+ GQKFLQE ELQGT SAVQV ENGEPV +VNQ+K P
Sbjct: 426 VNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVMENGEPVTLVNQRKTP 485

Query: 481 AANLQKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV 540
           A+NLQ+EFQKPP+SANGQFA +RPLE+ADARTIFVSNVHFAATKD+LSRHFNKFGEV+KV
Sbjct: 486 ASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKV 545

Query: 541 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRP 600
           IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKN+SQLEGAS V  P
Sbjct: 546 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVIWP 605

Query: 601 RAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNS 660
           RAVRGSPFPT RFTR PF+RGVPGG RARPP+KL ARSMQWKRD+QTTTADNGASLSGNS
Sbjct: 606 RAVRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQWKRDNQTTTADNGASLSGNS 665

Query: 661 VLSSGARSLTYVRTEPKPADK 682
           + S GARSLTYVRTEPKP DK
Sbjct: 666 IPSPGARSLTYVRTEPKPVDK 684

[Close]
BLAST of Carg11227 vs. TrEMBL
Match: tr|A0A1S3CFZ8|A0A1S3CFZ8_CUCME (uncharacterized protein LOC103500309 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1)

HSP 1 Score: 1008.4 bits (2606), Expect = 7.4e-291
Identity = 536/681 (78.71%), Postives = 581/681 (85.32%), Query Frame = 0 

Query: 1   MGSDDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGS+DRVDDRTFKVDF+GEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 6   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65

Query: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVEEPDIRNN 120
           AQNELNVFLAD+S SFVSWLWDHLAS +DLYVEPP KSSA  NEVPR KSPV EPD RNN
Sbjct: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSA--NEVPRPKSPVAEPDTRNN 125

Query: 121 SNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR 180
           S+NLESDSERGK+E+LSSR+ NREW+GIAN+ETRV P+SEVSRVKHSSPEQVP+HRKRSR
Sbjct: 126 SHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRKRSR 185

Query: 181 DDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXX 240
            DD QGTEREAAFQVSIAAPRRLLQFAMRDAVATT+PSN  KE   KRLRSVV       
Sbjct: 186 PDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNSDT 245

Query: 241 XXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTEFSGQIA 300
                            ATVIKAVTEA+EDV+RVKSSSVFDRLGRQS DMDLTE SG++ 
Sbjct: 246 TNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRLG 305

Query: 301 EYGVTSVGDDKHGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENED 360
           EYGVTSV +D++G++N ++DRPYSATYL RSNY GKY+ +E MFEPET LASDS SENED
Sbjct: 306 EYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASENED 365

Query: 361 VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI 420
           VNI+GHRV DDSWTAESGVRKG NLRTV FR V+NS+DER+ QY QKDQPSL  NSSRDI
Sbjct: 366 VNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSRDI 425

Query: 421 VNISVNVNTWKPPHYQDPGQIPEVGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRP 480
                                       FLQE ELQGT SAVQVTENGEPV +VNQ+K P
Sbjct: 426 ----------------------------FLQESELQGTRSAVQVTENGEPVTLVNQRKTP 485

Query: 481 AANLQKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV 540
           A+NLQKEFQKPP+SANGQFA++RPLE+ADARTIFVSNVHFAATKD+LSRHFNKFGEV+KV
Sbjct: 486 ASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKV 545

Query: 541 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRP 600
           IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKN+SQLEGAS VT P
Sbjct: 546 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWP 605

Query: 601 RAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNS 660
           RAVRGSPFPT RFTR PF+RGVPGG RARPP+KLGARSMQWKRD+QT TADNGASLSGNS
Sbjct: 606 RAVRGSPFPTSRFTRVPFMRGVPGGFRARPPMKLGARSMQWKRDNQTATADNGASLSGNS 655

Query: 661 VLSSGARSLTYVRTEPKPADK 682
           + S GARSLTYVRTEPKPADK
Sbjct: 666 IPSPGARSLTYVRTEPKPADK 655

[Close]
BLAST of Carg11227 vs. TrEMBL
Match: tr|A0A1S3CGU7|A0A1S3CGU7_CUCME (uncharacterized protein LOC103500309 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1)

HSP 1 Score: 1000.7 bits (2586), Expect = 1.5e-288
Identity = 533/681 (78.27%), Postives = 578/681 (84.88%), Query Frame = 0 

Query: 1   MGSDDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGS+DRVDDRTFKVDF+GEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 6   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65

Query: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVEEPDIRNN 120
           AQNELNVFLAD+S SFVSWLWDHLAS +DLYVEPP KSSA  NEVPR KSPV EPD RNN
Sbjct: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSA--NEVPRPKSPVAEPDTRNN 125

Query: 121 SNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR 180
           S+NLESDSERGK+E+LSSR+ NREW+GIAN+ETRV P+SEVSRVKHSSPEQVP+HRKRSR
Sbjct: 126 SHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRKRSR 185

Query: 181 DDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVXXXXXXX 240
            DD QGTEREAAFQVSIAAPRRLLQFAMRDAVATT+PSN  KE   KRLRSVV       
Sbjct: 186 PDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNSDT 245

Query: 241 XXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTEFSGQIA 300
                            ATVIKAVTEA+EDV+RVKSSSVFDRLGRQS DMDLTE SG++ 
Sbjct: 246 TNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRLG 305

Query: 301 EYGVTSVGDDKHGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENED 360
           EYGVTSV +D++G++N ++DRPYSATYL RSNY GKY+ +E MFEPET LASDS SENED
Sbjct: 306 EYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASENED 365

Query: 361 VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI 420
           VNI+GHRV DDSWTAESGVRKG NLRTV FR V+NS+DER+ QY QKDQPSL  NSSRDI
Sbjct: 366 VNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSRDI 425

Query: 421 VNISVNVNTWKPPHYQDPGQIPEVGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRP 480
                                          E ELQGT SAVQVTENGEPV +VNQ+K P
Sbjct: 426 -------------------------------ESELQGTRSAVQVTENGEPVTLVNQRKTP 485

Query: 481 AANLQKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV 540
           A+NLQKEFQKPP+SANGQFA++RPLE+ADARTIFVSNVHFAATKD+LSRHFNKFGEV+KV
Sbjct: 486 ASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKV 545

Query: 541 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRP 600
           IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKN+SQLEGAS VT P
Sbjct: 546 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWP 605

Query: 601 RAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNS 660
           RAVRGSPFPT RFTR PF+RGVPGG RARPP+KLGARSMQWKRD+QT TADNGASLSGNS
Sbjct: 606 RAVRGSPFPTSRFTRVPFMRGVPGGFRARPPMKLGARSMQWKRDNQTATADNGASLSGNS 652

Query: 661 VLSSGARSLTYVRTEPKPADK 682
           + S GARSLTYVRTEPKPADK
Sbjct: 666 IPSPGARSLTYVRTEPKPADK 652

[Close]
BLAST of Carg11227 vs. TrEMBL
Match: tr|F6HBB3|F6HBB3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0064g01190 PE=4 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 7.7e-179
Identity = 385/703 (54.77%), Postives = 470/703 (66.86%), Query Frame = 0 

Query: 1   MGSDDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           M   DR+DDRTF+V+FSG+G A+LRER+      FMGDYTDDTLVEYVIVLLRNGRRKEE
Sbjct: 1   MEGADRMDDRTFRVNFSGDGAARLRERVXXXXXXFMGDYTDDTLVEYVIVLLRNGRRKEE 60

Query: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVEEPDIRNN 120
           A+NELNVFL D+S SFVSWLWDHL S L LYV P     +  +E+   K  + E   RN+
Sbjct: 61  ARNELNVFLGDDSHSFVSWLWDHLDSHLQLYVLP---QESYPDEIAETKHTLGEHTERND 120

Query: 121 SNNLESDSERGKSEQLSSRQHNREWKGIAND---------------ETRVAPRSEVSRVK 180
           S +L+S+SERG S +  SR HNREWKG+A D               +T      +V   K
Sbjct: 121 SLHLDSESERGNSLRSRSR-HNREWKGLARDGAEPPPLRSSEDDHVQTEEKTHRKVGHAK 180

Query: 181 HSSPEQVPSHRKRSRDDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETL 240
            S   + P+ +KR+R DD +  +RE   Q +I APRRLLQFA+RDAVAT++PSN   E  
Sbjct: 181 RSLSPKHPNQKKRNRPDDLKQAKREVVSQATINAPRRLLQFAVRDAVATSRPSNLAAEPK 240

Query: 241 PKRLRSVV--XXXXXXXXXXXXXXXXXXXXXXXXATVIKAVTEAAEDVIRVKSS-SVFDR 300
            KRLRSVV                          AT IKAV EAAEDVI+V+SS +VFDR
Sbjct: 241 LKRLRSVVSTSTGDSSLDDRPQRLQSVARMPSAMATAIKAVAEAAEDVIKVRSSGNVFDR 300

Query: 301 LGRQSCDMDLTEFSGQIAEYGVTSVGDDKHGELNRTQDRPYSATYLGRSNYSGKYAPNEG 360
           LGR    MDL+E S Q A +  T   D  + +  +  ++  S T+L RS YS  YA N  
Sbjct: 301 LGRGPRGMDLSEVSDQQAGFRETGTEDGGYEDFKQIPEKTRS-THLQRSAYSEHYAGNVT 360

Query: 361 MFEPETRLASDSISENE---DVNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDE 420
           M E ET LASDS S+NE   DVN+ G R++D S +  +G  KG +   V +   +N+++ 
Sbjct: 361 MLESETGLASDSASDNEGYDDVNLMGRRIMDVSQSGTTGGNKGDDSLMVQYSVAKNADEG 420

Query: 421 RMTQYK-QKDQPSLVTNSSRDIVNISVNVNTWKPP-HYQDPGQIPEVGGQKFLQEGELQG 480
             T     + QPS V N+SR IVNISVNVNTWKPP HYQ P ++ EV GQK +Q G   G
Sbjct: 421 MRTMRSIDQGQPSAVANTSRKIVNISVNVNTWKPPAHYQGPREVEEVDGQKPVQ-GNETG 480

Query: 481 TG-SAVQVTE-NGEPVNIVNQQKRPAANLQKEFQKPPVSANGQFAASRPLEDADARTIFV 540
           TG S V++ + NG PV++ N   +PA + Q+E QK   SA G ++  RPLEDAD+RTIFV
Sbjct: 481 TGKSGVRLMKANGNPVSVGNGNAKPAVDTQRESQKMQPSAPGSYSTGRPLEDADSRTIFV 540

Query: 541 SNVHFAATKDTLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTS 600
           +NVHFAATKD+LSRHFNKFGEVVKVIIVTDA TGQPKGSAYVEFMRKE+AE+ALSLDGTS
Sbjct: 541 NNVHFAATKDSLSRHFNKFGEVVKVIIVTDAATGQPKGSAYVEFMRKEAAEHALSLDGTS 600

Query: 601 FMSRILKVVRKNSSQLEGASIVTRPRAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLG 660
           FMSRILKVV+++S+  E A  ++ PR  RGSPF   RF R PF RG+PG  RAR P+KLG
Sbjct: 601 FMSRILKVVKRSSTHQEAAPGMSWPRIARGSPFAAARFARVPFQRGIPGAFRARLPVKLG 660

Query: 661 ARSMQWKRDSQTTTADNGASLSGNSVLSSGARSLTYVRTEPKP 679
           ARS+QWKRD+Q T A++GA  S NSV S  ARSLTYVRTEPKP
Sbjct: 661 ARSLQWKRDAQPTLAESGAPASNNSVPSPTARSLTYVRTEPKP 697

The following BLAST results are available for this feature:
BLAST of Carg11227 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023528108.10.0e+0098.97nucleolin 1-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022935152.10.0e+0098.96nucleolin 1-like isoform X1 [Cucurbita moschata][more]
XP_022983276.10.0e+0097.21nucleolin 1-like isoform X1 [Cucurbita maxima][more]
XP_023528109.10.0e+0095.01uncharacterized protein LOC111791127 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022935153.10.0e+0094.96uncharacterized protein LOC111442109 isoform X2 [Cucurbita moschata][more]
BLAST of Carg11227 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12640.13.1e-10941.61RNA binding (RRM/RBD/RNP motifs) family protein[more]
AT2G24350.11.0e-1925.16RNA binding (RRM/RBD/RNP motifs) family protein[more]
AT5G65260.12.1e-1239.47RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G51120.22.7e-1238.57polyadenylate-binding protein 1[more]
AT5G10350.16.6e-1132.48RNA-binding (RRM/RBD/RNP motifs) family protein[more]
BLAST of Carg11227 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9DDY9|PAB2A_XENLA1.0e-1340.83Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=... [more]
sp|Q7ZXB8|PAB2B_XENLA1.0e-1340.83Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=... [more]
sp|Q6NVP7|PABP2_XENTR1.0e-1340.83Polyadenylate-binding protein 2 OS=Xenopus tropicalis OX=8364 GN=pabpn1 PE=2 SV=... [more]
sp|Q8CCS6|PABP2_MOUSE5.2e-1338.68Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3[more]
sp|Q28165|PABP2_BOVIN6.8e-1334.59Polyadenylate-binding protein 2 OS=Bos taurus OX=9913 GN=PABPN1 PE=1 SV=3[more]
BLAST of Carg11227 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CFE4|A0A1S3CFE4_CUCME0.0e+0082.38nucleolin 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1[more]
tr|A0A0A0L9I7|A0A0A0L9I7_CUCSA1.0e-30881.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697930 PE=4 SV=1[more]
tr|A0A1S3CFZ8|A0A1S3CFZ8_CUCME7.4e-29178.71uncharacterized protein LOC103500309 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3CGU7|A0A1S3CGU7_CUCME1.5e-28878.27uncharacterized protein LOC103500309 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|F6HBB3|F6HBB3_VITVI7.7e-17954.77Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0064g01190 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR012677Nucleotide-bd_a/b_plait_sf
IPR002483PWI_dom
IPR000504RRM_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg11227-RACarg11227-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 512..584
e-value: 1.4E-21
score: 87.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 513..581
e-value: 7.9E-18
score: 63.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 511..588
score: 17.319
IPR002483PWI domainPFAMPF01480PWIcoord: 24..86
e-value: 3.2E-7
score: 30.5
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 465..592
e-value: 3.6E-24
score: 87.5
NoneNo IPR availableGENE3DG3DSA:1.20.1390.10coord: 15..89
e-value: 1.5E-5
score: 26.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 640..670
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 602..681
NoneNo IPR availablePANTHERPTHR45275FAMILY NOT NAMEDcoord: 1..679
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 504..588

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg11227Cla017260Watermelon (97103) v1carwmB0816
Carg11227Csa3G697930Cucumber (Chinese Long) v2carcuB0829
Carg11227MELO3C023966Melon (DHL92) v3.5.1carmeB0811
Carg11227ClCG10G012470Watermelon (Charleston Gray)carwcgB0792
Carg11227CSPI03G29760Wild cucumber (PI 183967)carcpiB0850
Carg11227Cucsa.195110Cucumber (Gy14) v1carcgyB0931
Carg11227CmaCh01G002220Cucurbita maxima (Rimu)carcmaB1134
Carg11227CmaCh14G010130Cucurbita maxima (Rimu)carcmaB1132
Carg11227CmoCh01G002330Cucurbita moschata (Rifu)carcmoB1105
Carg11227CmoCh14G010290Cucurbita moschata (Rifu)carcmoB1102
Carg11227Lsi03G012120Bottle gourd (USVL1VR-Ls)carlsiB748
Carg11227Cp4.1LG02g15430Cucurbita pepo (Zucchini)carcpeB1146
Carg11227Cp4.1LG03g04410Cucurbita pepo (Zucchini)carcpeB1147
Carg11227CsGy3G027590Cucumber (Gy14) v2carcgybB0802
Carg11227MELO3C023966.2Melon (DHL92) v3.6.1carmedB0822
Carg11227CsaV3_3G032240Cucumber (Chinese Long) v3carcucB0853
Carg11227Cla97C10G195260Watermelon (97103) v2carwmbB0851
Carg11227Bhi11G001189Wax gourdcarwgoB0951
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg11227Carg07319Silver-seed gourdcarcarB605
The following block(s) are covering this gene:
GeneOrganismBlock
Carg11227Wax gourdcarwgoB0954
Carg11227Silver-seed gourdcarcarB383
Carg11227Silver-seed gourdcarcarB454
Carg11227Cucumber (Gy14) v2carcgybB0808
Carg11227Cucurbita maxima (Rimu)carcmaB1133
Carg11227Cucurbita maxima (Rimu)carcmaB1136
Carg11227Cucurbita moschata (Rifu)carcmoB1104
Carg11227Cucurbita moschata (Rifu)carcmoB1107
Carg11227Cucurbita pepo (Zucchini)carcpeB1144
Carg11227Cucurbita pepo (Zucchini)carcpeB1145
Carg11227Bottle gourd (USVL1VR-Ls)carlsiB747
Carg11227Melon (DHL92) v3.5.1carmeB0809
Carg11227Melon (DHL92) v3.6.1carmedB0820
Carg11227Watermelon (97103) v2carwmbB0852