Carg05220 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05220
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF1685 family protein
Location	Cucurbita_argyrosperma_scaffold_010 : 552785 .. 553683 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTACATCTATTATCCAACTCCGGCGAGGTCTCCGGACCCCCGGCGGTGCTTTCATGTCGGGATCTGCCGACCAACGTAAGCCGCCAATCGCTCGGCCTTTCCCACTCTACAAGCAGCTGTCATGGTCGCCTGACGCCGACCGTGAGGATGCCTGGCTCCGTCGCAAAGCCCAGAGCAAGATGCGGCGGAGCAAGAGCGTGACCGACGACGACCTCGAAGAACTCAAAGCCTGCGTGGAGTTGGGTTTCGGATTCAATTCGCCTGAGGTGGACCCTCGACTTTGTGAAACTTTGCCGGCGTTGAGCTTTTACCAGGCCGTCAATAAGCACTACAATCACTCTCTCTCCAATTCGTCGGCGTCTCTCTGTTCTTCCCCTGGGTCCGGCTCTGTTTCTCCATCCGCCCAGAGCAGCCCCGCCGCCATAATCAGCCGTATGTTACCCCCCCCCCCCCCCCCCCTTTTTTTACAACCTCTAATGAAATTGAATGGAGAAAATTATATGAATCTTATTGTTTTGATTTTGGTTTTTCTTGTTCTGATTGGATGCTTGGAAATTTGGAACTGGGTTTTCAGGGGAGAATCCGCAGACGGTGAAAGCAAGGCTGAAACAATGGGCGCAGGTTGTTGCTTGTTCAGTACGGCAGTATTAATTCTTCCTAATCAATTTCATCACCAAATTTGCATTATGTTTTTTATTTTTCCCGTCAAACTTCCGTTTTTGACTTGACTATAAATTCTAATCAATACATACACATTTAGATTGAATCCTGAATTACCCAAGTTGTTCGTTTCTTGAATTCTATGTGTTCCGAAATTCTGTTGTGAAAGGCACTCCAATGTCCGATTTATTAAATTGGAAGAATTGGGAGGAAGCTGGTTGTATCTTCCACGCCTCC

mRNA sequence

AATTACATCTATTATCCAACTCCGGCGAGGTCTCCGGACCCCCGGCGGTGCTTTCATGTCGGGATCTGCCGACCAACGTAAGCCGCCAATCGCTCGGCCTTTCCCACTCTACAAGCAGCTGTCATGGTCGCCTGACGCCGACCGTGAGGATGCCTGGCTCCGTCGCAAAGCCCAGAGCAAGATGCGGCGGAGCAAGAGCGTGACCGACGACGACCTCGAAGAACTCAAAGCCTGCGTGGAGTTGGGTTTCGGATTCAATTCGCCTGAGGTGGACCCTCGACTTTGTGAAACTTTGCCGGCGTTGAGCTTTTACCAGGCCGTCAATAAGCACTACAATCACTCTCTCTCCAATTCGTCGGCGTCTCTCTGTTCTTCCCCTGGGTCCGGCTCTGTTTCTCCATCCGCCCAGAGCAGCCCCGCCGCCATAATCAGCCGGGAGAATCCGCAGACGGTGAAAGCAAGGCTGAAACAATGGGCGCAGGTTGTTGCTTGTTCAGTACGGCAGTATTAATTCTTCCTAATCAATTTCATCACCAAATTTGCATTATGTTTTTTATTTTTCCCGTCAAACTTCCGTTTTTGACTTGACTATAAATTCTAATCAATACATACACATTTAGATTGAATCCTGAATTACCCAAGTTGTTCGTTTCTTGAATTCTATGTGTTCCGAAATTCTGTTGTGAAAGGCACTCCAATGTCCGATTTATTAAATTGGAAGAATTGGGAGGAAGCTGGTTGTATCTTCCACGCCTCC

Coding sequence (CDS)

ATGTCGGGATCTGCCGACCAACGTAAGCCGCCAATCGCTCGGCCTTTCCCACTCTACAAGCAGCTGTCATGGTCGCCTGACGCCGACCGTGAGGATGCCTGGCTCCGTCGCAAAGCCCAGAGCAAGATGCGGCGGAGCAAGAGCGTGACCGACGACGACCTCGAAGAACTCAAAGCCTGCGTGGAGTTGGGTTTCGGATTCAATTCGCCTGAGGTGGACCCTCGACTTTGTGAAACTTTGCCGGCGTTGAGCTTTTACCAGGCCGTCAATAAGCACTACAATCACTCTCTCTCCAATTCGTCGGCGTCTCTCTGTTCTTCCCCTGGGTCCGGCTCTGTTTCTCCATCCGCCCAGAGCAGCCCCGCCGCCATAATCAGCCGGGAGAATCCGCAGACGGTGAAAGCAAGGCTGAAACAATGGGCGCAGGTTGTTGCTTGTTCAGTACGGCAGTATTAA

Protein sequence

MSGSADQRKPPIARPFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELKACVELGFGFNSPEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQSSPAAIISRENPQTVKARLKQWAQVVACSVRQY

Homology

[Close]

BLAST of Carg05220 vs. NCBI nr
Match: XP_022962884.1 (uncharacterized protein LOC111463251 [Cucurbita moschata])

HSP 1 Score: 293.1 bits (749), Expect = 5.3e-76
Identity = 150/152 (98.68%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MSGSADQRKPPIARPFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELKAC 60
           MSGSADQRKPPIARPFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELKAC
Sbjct: 1   MSGSADQRKPPIARPFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELKAC 60

Query: 61  VELGFGFNSPEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQSS 120
           VELGFGFNSPEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQSS
Sbjct: 61  VELGFGFNSPEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQSS 120

Query: 121 PAAIISR-ENPQTVKARLKQWAQVVACSVRQY 152
           PAAIIS  ENPQTVKARLKQWAQVVACSVRQY
Sbjct: 121 PAAIISHGENPQTVKARLKQWAQVVACSVRQY 152

[Close]

BLAST of Carg05220 vs. NCBI nr
Match: XP_023518715.1 (uncharacterized protein LOC111782145 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.6 bits (745), Expect = 1.6e-75
Identity = 149/152 (98.03%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MSGSADQRKPPIARPFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELKAC 60
           MSGSADQRKPPIARPFPLYKQLSWSPDADREDAWLRRK QSKMRRSKSVTDDDLEELKAC
Sbjct: 1   MSGSADQRKPPIARPFPLYKQLSWSPDADREDAWLRRKTQSKMRRSKSVTDDDLEELKAC 60

Query: 61  VELGFGFNSPEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQSS 120
           VELGFGFNSPEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQSS
Sbjct: 61  VELGFGFNSPEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQSS 120

Query: 121 PAAIISR-ENPQTVKARLKQWAQVVACSVRQY 152
           PAAIIS  ENPQTVKARLKQWAQVVACSVRQY
Sbjct: 121 PAAIISHGENPQTVKARLKQWAQVVACSVRQY 152

[Close]

BLAST of Carg05220 vs. NCBI nr
Match: XP_023003217.1 (uncharacterized protein LOC111496895 [Cucurbita maxima])

HSP 1 Score: 290.4 bits (742), Expect = 3.5e-75
Identity = 149/152 (98.03%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MSGSADQRKPPIARPFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELKAC 60
           MSGSADQRKPPIARPFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELKAC
Sbjct: 1   MSGSADQRKPPIARPFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELKAC 60

Query: 61  VELGFGFNSPEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQSS 120
           VELGFGFNSPEVDPRLCETLPALSFYQAVNK+YNHSLSNSSASLCSSPGSGSVSPSAQSS
Sbjct: 61  VELGFGFNSPEVDPRLCETLPALSFYQAVNKNYNHSLSNSSASLCSSPGSGSVSPSAQSS 120

Query: 121 PAAIISR-ENPQTVKARLKQWAQVVACSVRQY 152
           PAAIIS  ENPQTVKARLKQWAQVVACSVRQY
Sbjct: 121 PAAIISHGENPQTVKARLKQWAQVVACSVRQY 152

[Close]

BLAST of Carg05220 vs. NCBI nr
Match: XP_004141915.1 (PREDICTED: uncharacterized protein LOC101216565 [Cucumis sativus] >KGN48524.1 hypothetical protein Csa_6G490880 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 4.4e-62
Identity = 130/154 (84.42%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MSGSADQR--KPPIARPFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELK 60
           MS SAD R   PP+ RPFPLYKQ SWSPDADR+ AWLRRK QSKMRRSKSVTDDDLEELK
Sbjct: 1   MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQ 120
           AC+ELGFGFNSPEVDPRLCET PAL FY AVNK YN +LSNSSASLCSSP S SVSPSA 
Sbjct: 61  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 120

Query: 121 SSPAAIISR-ENPQTVKARLKQWAQVVACSVRQY 152
           SSPAAIIS  ENPQ VKARLKQWAQVVACSVRQY
Sbjct: 121 SSPAAIISHGENPQMVKARLKQWAQVVACSVRQY 154

[Close]

BLAST of Carg05220 vs. NCBI nr
Match: XP_023544597.1 (uncharacterized protein LOC111804129 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.9 bits (629), Expect = 4.4e-62
Identity = 130/154 (84.42%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 1   MSGSADQRKPP--IARPFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELK 60
           MS   D R PP  +ARPFPLYK LSWSPDADRE+AWLRRK QSK+RRSKSVTDDD EELK
Sbjct: 1   MSDIDDLRSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQ 120
           ACVELGFGFNSPEVDPRLCET PAL FY AVNKHY  +LSNSSASLCSSP S S+SPSAQ
Sbjct: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSASLCSSPVSDSLSPSAQ 120

Query: 121 SSPAAIIS-RENPQTVKARLKQWAQVVACSVRQY 152
           SSPAAIIS  ENPQTVKARLKQWAQVVACSVRQY
Sbjct: 121 SSPAAIISLGENPQTVKARLKQWAQVVACSVRQY 154

[Close]

BLAST of Carg05220 vs. TAIR10
Match: AT4G33985.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-36
Identity = 84/144 (58.33%), Postives = 105/144 (72.92%), Query Frame = 0


Query: 13  ARPFPLYKQLSWSPDADREDAWLRRKAQ---SKMRRSKSVTDDDLEELKACVELGFGF-- 72
           A P PL KQ SWSPDADRE+AWLR+K +    ++ RSKSVTD+DLEELK C+ELGFGF  
Sbjct: 10  APPRPLVKQHSWSPDADREEAWLRKKGKQSLGRLGRSKSVTDEDLEELKGCIELGFGFEP 69

Query: 73  NSPEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQSSPAAIISR 132
           +SP++DPRL ETLPAL  Y AVNK Y+  LS +S SL S    G    ++ SS   +   
Sbjct: 70  DSPDLDPRLSETLPALGLYCAVNKQYSSRLSRTS-SLSSIASEGE---NSNSSTTIVDQG 129

Query: 133 ENPQTVKARLKQWAQVVACSVRQY 152
           ++P+T+K RLKQWAQVVACSV+Q+
Sbjct: 130 DDPETMKLRLKQWAQVVACSVKQF 149

[Close]

BLAST of Carg05220 vs. TAIR10
Match: AT2G15590.2 (Protein of unknown function (DUF1685))

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 66/140 (47.14%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 15  PFPLYKQLSWSPDADREDAWLRRKAQ---SKMRRSKSVTDDDLEELKACVELGFGF--NS 74
           P PL KQ SWSPD  RE+AWLR+K +     + RSKSVT+DD+EELK C ELGFGF   S
Sbjct: 9   PRPLMKQYSWSPDMSREEAWLRKKKKRPLDLLPRSKSVTNDDIEELKGCFELGFGFETES 68

Query: 75  PEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQSSPAAIISREN 134
           P+++PRL  T+PAL  Y AV++ Y++ LS +S+       S S      +    +   ++
Sbjct: 69  PDLNPRLSHTIPALDLYCAVHRQYSNHLSRTSSFASDHEVSNS-----NNITTIVDKGDD 128

Query: 135 PQTVKARLKQWAQVVACSVR 150
            +T+K +LKQWA+VV  SVR
Sbjct: 129 RKTMKQKLKQWAKVVGFSVR 143

[Close]

BLAST of Carg05220 vs. TAIR10
Match: AT3G50350.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 103.6 bits (257), Expect = 1.1e-22
Identity = 61/110 (55.45%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 13  ARPFP---LYKQLSWSPDADREDAWLRRKAQSK---MRRSKSVTDDDLEELKACVELGFG 72
           A P P   L KQ SWSPD  RE+AW +R+  S+   +RR KS+TD+DL+ELKA  ELGFG
Sbjct: 31  APPLPSTSLLKQHSWSPDLIREEAWSKRQDISRHRHLRRGKSLTDEDLDELKASFELGFG 90

Query: 73  FNSPE-VDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSP 116
           F SPE  DPRL  TLPAL  Y AV K YN ++SN S +  SS   G  SP
Sbjct: 91  FGSPENADPRLSNTLPALELYFAVQKSYNDAVSNKSTTSSSSLSDGDTSP 140

[Close]

BLAST of Carg05220 vs. TAIR10
Match: AT2G15610.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 85.1 bits (209), Expect = 4.0e-17
Identity = 48/105 (45.71%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 5   ADQRKPPIARPFPLYKQLSWSPDADREDAWLRRKAQ---SKMRRSKS-VTDDDLEELKAC 64
           ++Q KP    P PL KQ S  PD +RE+AWLR K +   +++ RSKS VT+DD+EEL+ C
Sbjct: 2   SNQNKP--QPPKPLMKQQSLPPDINREEAWLRMKKKHPSARLHRSKSCVTNDDIEELRGC 61

Query: 65  VELGFGFNSPEVD--PRLCETLPALSFYQAVNKHYNHSLSNSSAS 104
            +LGFGF    +D  P L +T+PAL  Y A+++ Y++ LS + +S
Sbjct: 62  FDLGFGFEPDSLDFNPSLSKTIPALDLYSAIHRQYSNHLSRTWSS 104

[Close]

BLAST of Carg05220 vs. TAIR10
Match: AT1G05870.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 84.7 bits (208), Expect = 5.2e-17
Identity = 53/115 (46.09%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 43  MRRSKSVTDDDLEELKACVELGFGFNSPEVDPRLCETLPALSFYQAVNKHY-----NHSL 102
           + RSKS+TDDDLE+L+ C++LGFGF+  E+ P LC TLPAL    ++++ +     N S 
Sbjct: 78  LTRSKSLTDDDLEDLRGCLDLGFGFSYDEI-PELCNTLPALELCYSMSQKFLDDKQNKSP 137

Query: 103 SNSSASLCSSPGSGSVSPSAQ---SSPAAIISRENPQTVKARLKQWAQVVACSVR 150
             SS   C SP   + +P A    SSP      +NP  VKARLK WAQ VAC+V+
Sbjct: 138 ETSSVEDCPSPPLVTATPIANWKISSPG-----DNPDDVKARLKYWAQAVACTVQ 186

[Close]

BLAST of Carg05220 vs. TrEMBL
Match: tr|A0A0A0KIC0|A0A0A0KIC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490880 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.9e-62
Identity = 130/154 (84.42%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MSGSADQR--KPPIARPFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELK 60
           MS SAD R   PP+ RPFPLYKQ SWSPDADR+ AWLRRK QSKMRRSKSVTDDDLEELK
Sbjct: 1   MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQ 120
           AC+ELGFGFNSPEVDPRLCET PAL FY AVNK YN +LSNSSASLCSSP S SVSPSA 
Sbjct: 61  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 120

Query: 121 SSPAAIISR-ENPQTVKARLKQWAQVVACSVRQY 152
           SSPAAIIS  ENPQ VKARLKQWAQVVACSVRQY
Sbjct: 121 SSPAAIISHGENPQMVKARLKQWAQVVACSVRQY 154

[Close]

BLAST of Carg05220 vs. TrEMBL
Match: tr|A0A1S3CS97|A0A1S3CS97_CUCME (uncharacterized protein LOC103504252 OS=Cucumis melo OX=3656 GN=LOC103504252 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.3e-49
Identity = 106/128 (82.81%), Postives = 110/128 (85.94%), Query Frame = 0


Query: 1   MSGSADQR--KPPIARPFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELK 60
           MS SAD R   PP +RPFPLYKQ SWSPDADR+ AW+RRK QSKMRRSKSVTDDDLEELK
Sbjct: 1   MSDSADHRLPPPPFSRPFPLYKQHSWSPDADRDQAWVRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQ 120
           ACVELGFGFNSPEVDPRLCET PAL FY AVNK YN +LSNSSASLCSSP S SVSPSA 
Sbjct: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSDSVSPSAD 120

Query: 121 SSPAAIIS 127
            SPAAIIS
Sbjct: 121 GSPAAIIS 128

[Close]

BLAST of Carg05220 vs. TrEMBL
Match: tr|A0A2P5RUX8|A0A2P5RUX8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD12446 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.8e-38
Identity = 89/137 (64.96%), Postives = 101/137 (73.72%), Query Frame = 0


Query: 15  PFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELKACVELGFGFNSPEVDP 74
           P PLYK  SWSPD  R++AWLRRK  SK RRSKSVTD+DL+ELKAC+ELGFGF+SPEVDP
Sbjct: 37  PVPLYKHPSWSPDIFRDEAWLRRKGNSKKRRSKSVTDEDLDELKACIELGFGFDSPEVDP 96

Query: 75  RLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQSSPAAIIS-RENPQTV 134
           RL ET PAL  Y AVNK YN ++S  S S  S        PS   SP AI+   +NP+TV
Sbjct: 97  RLSETFPALGLYYAVNKSYNDAISKPSTSPPSVLSDCDSIPSPVGSPHAIVGPGDNPRTV 156

Query: 135 KARLKQWAQVVACSVRQ 151
           K RL+QWAQVVACSVRQ
Sbjct: 157 KTRLRQWAQVVACSVRQ 173

[Close]

BLAST of Carg05220 vs. TrEMBL
Match: tr|A0A1U8K854|A0A1U8K854_GOSHI (uncharacterized protein LOC107914318 OS=Gossypium hirsutum OX=3635 GN=LOC107914318 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.0e-38
Identity = 89/137 (64.96%), Postives = 101/137 (73.72%), Query Frame = 0


Query: 15  PFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELKACVELGFGFNSPEVDP 74
           P PLYK  SWSPD  R++AWLRRK  SK RRSKSVTD+DL+ELKAC+ELGFGF+SPEVDP
Sbjct: 37  PVPLYKHPSWSPDIFRDEAWLRRKGNSKKRRSKSVTDEDLDELKACIELGFGFDSPEVDP 96

Query: 75  RLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQSSPAAIIS-RENPQTV 134
           RL ET PAL  Y AVNK YN ++S  S S  S        PS   SP AI+   +NP+TV
Sbjct: 97  RLSETFPALRLYYAVNKSYNDAISKPSTSPPSVVSDCDSIPSPIGSPHAIVGPGDNPRTV 156

Query: 135 KARLKQWAQVVACSVRQ 151
           K RL+QWAQVVACSVRQ
Sbjct: 157 KTRLRQWAQVVACSVRQ 173

[Close]

BLAST of Carg05220 vs. TrEMBL
Match: tr|A0A0D2VKX9|A0A0D2VKX9_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G105800 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.5e-38
Identity = 88/137 (64.23%), Postives = 101/137 (73.72%), Query Frame = 0


Query: 15  PFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELKACVELGFGFNSPEVDP 74
           P PLYK  SWSPD  R++AWLRRK  SK RRSKSVTD+DL+ELKAC+ELGFGF+SPEVDP
Sbjct: 35  PVPLYKHPSWSPDIFRDEAWLRRKGNSKKRRSKSVTDEDLDELKACIELGFGFDSPEVDP 94

Query: 75  RLCETLPALSFYQAVNKHYNHSLSNSSASLCSSPGSGSVSPSAQSSPAAIIS-RENPQTV 134
           RL +T PAL  Y AVNK YN ++S  S S  S        PS   SP AI+   +NP+TV
Sbjct: 95  RLSQTFPALGLYYAVNKSYNDAISKPSTSPPSVVSDCDSIPSPIGSPHAIVGPGDNPRTV 154

Query: 135 KARLKQWAQVVACSVRQ 151
           K RL+QWAQVVACSVRQ
Sbjct: 155 KTRLRQWAQVVACSVRQ 171

The following BLAST results are available for this feature:

BLAST of Carg05220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962884.1	5.3e-76	98.68	uncharacterized protein LOC111463251 [Cucurbita moschata]	[more]
XP_023518715.1	1.6e-75	98.03	uncharacterized protein LOC111782145 [Cucurbita pepo subsp. pepo]	[more]
XP_023003217.1	3.5e-75	98.03	uncharacterized protein LOC111496895 [Cucurbita maxima]	[more]
XP_004141915.1	4.4e-62	84.42	PREDICTED: uncharacterized protein LOC101216565 [Cucumis sativus] >KGN48524.1 hy...	[more]
XP_023544597.1	4.4e-62	84.42	uncharacterized protein LOC111804129 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg05220 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33985.1	2.3e-36	58.33	Protein of unknown function (DUF1685)	[more]
AT2G15590.2	1.1e-25	47.14	Protein of unknown function (DUF1685)	[more]
AT3G50350.1	1.1e-22	55.45	Protein of unknown function (DUF1685)	[more]
AT2G15610.1	4.0e-17	45.71	Protein of unknown function (DUF1685)	[more]
AT1G05870.1	5.2e-17	46.09	Protein of unknown function (DUF1685)	[more]

BLAST of Carg05220 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg05220 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KIC0\|A0A0A0KIC0_CUCSA	2.9e-62	84.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490880 PE=4 SV=1	[more]
tr\|A0A1S3CS97\|A0A1S3CS97_CUCME	1.3e-49	82.81	uncharacterized protein LOC103504252 OS=Cucumis melo OX=3656 GN=LOC103504252 PE=...	[more]
tr\|A0A2P5RUX8\|A0A2P5RUX8_GOSBA	3.8e-38	64.96	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD12446 PE=4 SV...	[more]
tr\|A0A1U8K854\|A0A1U8K854_GOSHI	5.0e-38	64.96	uncharacterized protein LOC107914318 OS=Gossypium hirsutum OX=3635 GN=LOC1079143...	[more]
tr\|A0A0D2VKX9\|A0A0D2VKX9_GOSRA	8.5e-38	64.23	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G105800 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012881	DUF1685

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05220-RA	Carg05220-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 49..102 e-value: 7.7E-25 score: 86.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..122
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 15..150
None	No IPR available	PANTHER	PTHR31865:SF1	SUBFAMILY NOT NAMED	coord: 15..150

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05220	Cla020209	Watermelon (97103) v1	carwmB0808
Carg05220	Cla000712	Watermelon (97103) v1	carwmB0804
Carg05220	Csa6G490880	Cucumber (Chinese Long) v2	carcuB0826
Carg05220	MELO3C020877	Melon (DHL92) v3.5.1	carmeB0800
Carg05220	ClCG02G012570	Watermelon (Charleston Gray)	carwcgB0780
Carg05220	ClCG01G016820	Watermelon (Charleston Gray)	carwcgB0778
Carg05220	CSPI06G28120	Wild cucumber (PI 183967)	carcpiB0846
Carg05220	Cucsa.367010	Cucumber (Gy14) v1	carcgyB0924
Carg05220	Cucsa.102420	Cucumber (Gy14) v1	carcgyB0918
Carg05220	CmaCh03G009800	Cucurbita maxima (Rimu)	carcmaB1125
Carg05220	CmaCh07G007070	Cucurbita maxima (Rimu)	carcmaB1130
Carg05220	CmoCh03G009940	Cucurbita moschata (Rifu)	carcmoB1095
Carg05220	CmoCh07G007210	Cucurbita moschata (Rifu)	carcmoB1100
Carg05220	Lsi01G009770	Bottle gourd (USVL1VR-Ls)	carlsiB742
Carg05220	Lsi10G005470	Bottle gourd (USVL1VR-Ls)	carlsiB738
Carg05220	Cp4.1LG10g02530	Cucurbita pepo (Zucchini)	carcpeB1128
Carg05220	Cp4.1LG19g11080	Cucurbita pepo (Zucchini)	carcpeB1135
Carg05220	CsGy2G014040	Cucumber (Gy14) v2	carcgybB0792
Carg05220	CsGy6G027550	Cucumber (Gy14) v2	carcgybB0799
Carg05220	MELO3C020877.2	Melon (DHL92) v3.6.1	carmedB0812
Carg05220	CsaV3_2G016680	Cucumber (Chinese Long) v3	carcucB0842
Carg05220	CsaV3_6G043260	Cucumber (Chinese Long) v3	carcucB0849
Carg05220	Cla97C01G015920	Watermelon (97103) v2	carwmbB0839
Carg05220	Cla97C02G038260	Watermelon (97103) v2	carwmbB0842
Carg05220	Bhi03G001441	Wax gourd	carwgoB0944

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05220	Carg00841	Silver-seed gourd	carcarB428

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05220	Silver-seed gourd	carcarB225
Carg05220	Cucumber (Gy14) v2	carcgybB0800
Carg05220	Cucumber (Gy14) v1	carcgyB0920
Carg05220	Cucurbita maxima (Rimu)	carcmaB1115
Carg05220	Cucurbita maxima (Rimu)	carcmaB1118
Carg05220	Cucurbita moschata (Rifu)	carcmoB1089
Carg05220	Cucurbita pepo (Zucchini)	carcpeB1130
Carg05220	Cucurbita pepo (Zucchini)	carcpeB1136
Carg05220	Cucurbita pepo (Zucchini)	carcpeB1140
Carg05220	Wild cucumber (PI 183967)	carcpiB0849
Carg05220	Cucumber (Chinese Long) v2	carcuB0827
Carg05220	Cucumber (Chinese Long) v3	carcucB0852
Carg05220	Melon (DHL92) v3.5.1	carmeB0807
Carg05220	Melon (DHL92) v3.6.1	carmedB0818
Carg05220	Watermelon (Charleston Gray)	carwcgB0786
Carg05220	Watermelon (97103) v1	carwmB0805
Carg05220	Watermelon (97103) v1	carwmB0812
Carg05220	Watermelon (97103) v2	carwmbB0846