Carg16013 (gene) Silver-seed gourd

NameCarg16013
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPeptidylprolyl isomerase
LocationCucurbita_argyrosperma_scaffold_090 : 201625 .. 204098 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGGCCGATACTCCGCCGCCACTCATTCAAACACTGCCGCAAAGGATCAGACAGAGCACAGTCCGATCATACTGAAATGGCGCTCTCTTCATTAACCTTCACAACCCCAAGAGCTCAGGCTTCCCAAATTTTCAGCCCCAGATTATCTTCCGCCGTTAAACCCACCCCTTGTTGTTCTTCTTCTTCTTCCTCAGTTTCTGCTGCTAAGAAGGCAATATCTAATGTGGGCATTGGGGTTCTTGCTGCTTCGGTTCTGGCTCTGTCGCCTTTGGATGCTAACGCTACCAGGATTGAATACTATGCGACTGTTGGAGAACCCCTTTGCGAGTTCAGATATGTTCCTTCCGGCCTTGGCTATTGCGACCTTGCCGTGGGATCCGGTGAGGAAGTTCCTTATAATGAGCTTATCAATGTCAGTTCCTAACTTCGATTTTGAAGTTTGTTTCTCGCTTACCATCAAATTGAAGTGCTCTTGCATTGCTTTTGTTGCAATCGCTAATTCCCTCCAATGCCTACTTTTTGCAATTTGCTAATGAAATGTTCTTCAATTGATAATCGTTTCATAAAATCATACAGGATTTTGTGAATTGTTGTGGGCTTATGTACCTTTTAAATGCAGGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGATAGCAGTTACAAGCGAGCTAGACCTCTCACCATGCGCATTGGTGTAGGCAAGGTATTTGATGAAATGTTTTGTACAGTTTCTTAAGGTAGGTTGAAAAGTGTGTACAATTTATTCGAAAGTGAGCAACTACAGCCTTTGGGAGCAATGGAGGAAAGGTCTCGGTTATCAAGATGAGAGGGTACTGAAAATTTTTCTCCTCCCATCCGCTGATTAGGAGTAAGAATGTGAGATCCCACATTGGTCGGAAAGAAGAACGAAACATTCATTATAAGGGTGTGGAAATCTTTCCCTAGTAGACGCGTTTTATAACCGTGAAGCTGATGGCGATACGAAACGGGCCAAAACAGACAATATCTGCTAGCGATGGGCTTGAGCTGTAACAAATGGTATCAAAGCCAGGCACCGAGCGGTGTGCCAACGAGGACGTTGGGTCCCCAAGGAGGGTGGATTGTGAGATCTCACATCAGTTGGAGAGGAGAACGATACATTCCTTGTAAGAGTGTGGAAACCTATCCCTAGTAGAAGTGTTTTAAAACCGTGAGGCTGACAACTATACATAACGAGCCAAAACAGACAATATCTGCTAGCGGTGGGCTTAGACTGTTACAAATGGTATCAGAGCTAGACACCGAGCAGTGTGCCAGCGAGGATGCTGGGACCTCAAGAGGGTGGATTGAGAGATACCATGTTGGTTGGAGAGGAGAACGAAACATTCCCTATAAGGATGTGGAAACCTCTACCTAGTAGATGCGTTTTAAAACCGTGAGGCTGGTGGCGACACGTAATAGACCAAAGTAGACAATATCTGTTAGCGGTGGGCTTGAGTTGTTACAAAGAAACTACTTGTAAAACCGACCCTTAATACTTGCAACCAATCTTAAAAATAGACACAATATGGATGAATAATTCATTAACTAAGTGGCTAACTACACTCATTTCCCTTTGTTGAGTAGTATGTTAAGTGGGTTTAGTTGCAAGTTTGTGACTGATTGGAAGATTAGTATTGATTAGTTTGTGACCAGGTAATAAGAGGCTTGGATCAGGGAATATTAGGAGGTGAAGGAGTACCTCCAATGCTAGTAGGTATGTCTACAGGCATAATGAGTAGGATTTTGTGGCTACTTTTACTTCTTATTGGCTTCTAAGAATCATTGCCCCGCTGATTTTGCCTAGGTGGGAAACGTAAACTTAAGATTCCTCCACATTTAGCATATGGTCCAGAGCCAGCAGGCTGCTTTTCAGGTCGAGTTCTTTAAACCAAACAGCTTTTGTTTTGAGCTTTGGCTATCTAAATCTTCATGAACATGTCTCAAATTGCCTGTGATTCCTTCTTGTAGGAATTATTACTGTAGTTTACTGTTTGGTTAATGCCATTTGTGTTGCCTTTACAGGTGACTGCAATATACCTGGAAATGCAACTCTTGTGTATGATATAAACTTCGTAGGAGTCTACTCCGGAAATAGGAAGTGAAGGAAATGATATCCATTTTCCTACAAATTTCTTGTAGATAGACAACACAGAATAAGTGAGTTTCTGACTTTTCTATTATATTCAATCATATAAACCTTCGCGTTGTTAGTTTCTCTTTGAAGTTATACTCACGACACAGCTATTTGAATACATCCCATTTCGTTTTTCTCCCACGTCAAAAAGTAGAACCACACTGATATTTGGGATATGCATCTAACAGCCCGTTACGTATCACCATCAGTTTCACGGTTCTAAAACATGTCTACTAGGGAGAGATTTCCACACCCTTATTAGGAATGTTTCGTTCCTCTATCCAACCAATGTGGGATCTCACAATGCAT

mRNA sequence

AATGGCCGATACTCCGCCGCCACTCATTCAAACACTGCCGCAAAGGATCAGACAGAGCACAGTCCGATCATACTGAAATGGCGCTCTCTTCATTAACCTTCACAACCCCAAGAGCTCAGGCTTCCCAAATTTTCAGCCCCAGATTATCTTCCGCCGTTAAACCCACCCCTTGTTGTTCTTCTTCTTCTTCCTCAGTTTCTGCTGCTAAGAAGGCAATATCTAATGTGGGCATTGGGGTTCTTGCTGCTTCGGTTCTGGCTCTGTCGCCTTTGGATGCTAACGCTACCAGGATTGAATACTATGCGACTGTTGGAGAACCCCTTTGCGAGTTCAGATATGTTCCTTCCGGCCTTGGCTATTGCGACCTTGCCGTGGGATCCGGTGAGGAAGTTCCTTATAATGAGCTTATCAATGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGATAGCAGTTACAAGCGAGCTAGACCTCTCACCATGCGCATTGGTGTAGGCAAGGTAATAAGAGGCTTGGATCAGGGAATATTAGGAGGTGAAGGAGTACCTCCAATGCTAGTAGGTGGGAAACGTAAACTTAAGATTCCTCCACATTTAGCATATGGTCCAGAGCCAGCAGGCTGCTTTTCAGGTGACTGCAATATACCTGGAAATGCAACTCTTGTGTATGATATAAACTTCGTAGGAGTCTACTCCGGAAATAGGAAGTGAAGGAAATGATATCCATTTTCCTACAAATTTCTTGTAGATAGACAACACAGAATAAGTGAGTTTCTGACTTTTCTATTATATTCAATCATATAAACCTTCGCGTTGTTAGTTTCTCTTTGAAGTTATACTCACGACACAGCTATTTGAATACATCCCATTTCGTTTTTCTCCCACGTCAAAAAGTAGAACCACACTGATATTTGGGATATGCATCTAACAGCCCGTTACGTATCACCATCAGTTTCACGGTTCTAAAACATGTCTACTAGGGAGAGATTTCCACACCCTTATTAGGAATGTTTCGTTCCTCTATCCAACCAATGTGGGATCTCACAATGCAT

Coding sequence (CDS)

ATGGCGCTCTCTTCATTAACCTTCACAACCCCAAGAGCTCAGGCTTCCCAAATTTTCAGCCCCAGATTATCTTCCGCCGTTAAACCCACCCCTTGTTGTTCTTCTTCTTCTTCCTCAGTTTCTGCTGCTAAGAAGGCAATATCTAATGTGGGCATTGGGGTTCTTGCTGCTTCGGTTCTGGCTCTGTCGCCTTTGGATGCTAACGCTACCAGGATTGAATACTATGCGACTGTTGGAGAACCCCTTTGCGAGTTCAGATATGTTCCTTCCGGCCTTGGCTATTGCGACCTTGCCGTGGGATCCGGTGAGGAAGTTCCTTATAATGAGCTTATCAATGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGATAGCAGTTACAAGCGAGCTAGACCTCTCACCATGCGCATTGGTGTAGGCAAGGTAATAAGAGGCTTGGATCAGGGAATATTAGGAGGTGAAGGAGTACCTCCAATGCTAGTAGGTGGGAAACGTAAACTTAAGATTCCTCCACATTTAGCATATGGTCCAGAGCCAGCAGGCTGCTTTTCAGGTGACTGCAATATACCTGGAAATGCAACTCTTGTGTATGATATAAACTTCGTAGGAGTCTACTCCGGAAATAGGAAGTGA

Protein sequence

MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCCSSSSSSVSAAKKAISNVGIGVLAASVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
BLAST of Carg16013 vs. NCBI nr
Match: XP_022962734.1 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 397.5 bits (1020), Expect = 2.8e-107
Identity = 199/212 (93.87%), Postives = 200/212 (94.34%), Query Frame = 0

Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCXXXXXXXXXXXXKAISNVGIGVLAASVL 60
           MALSSLTFTTPRAQASQIFSPRLSSAVKPTPC            KAISNVGIGVLAASVL
Sbjct: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPC--CSSSSVSATKKAISNVGIGVLAASVL 60

Query: 61  ALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFA 120
           ALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFA
Sbjct: 61  ALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFA 120

Query: 121 DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGPE 180
           DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKL+IPPHLAYGPE
Sbjct: 121 DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAYGPE 180

Query: 181 PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 213
           PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 181 PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 210

BLAST of Carg16013 vs. NCBI nr
Match: XP_023517456.1 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.2 bits (1014), Expect = 1.4e-106
Identity = 200/212 (94.34%), Postives = 200/212 (94.34%), Query Frame = 0

Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCXXXXXXXXXXXXKAISNVGIGVLAASVL 60
           MALSSLTFTTPRAQASQIFSPRLSSAVKPTP      X      KAISNVGIGVLAASVL
Sbjct: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTP--SSSSXSVSATKKAISNVGIGVLAASVL 60

Query: 61  ALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFA 120
           ALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFA
Sbjct: 61  ALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFA 120

Query: 121 DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGPE 180
           DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGPE
Sbjct: 121 DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGPE 180

Query: 181 PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 213
           PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 181 PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 210

BLAST of Carg16013 vs. NCBI nr
Match: XP_008440633.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo] >XP_008440634.1 PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo] >XP_008440635.1 PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo])

HSP 1 Score: 376.3 bits (965), Expect = 6.7e-101
Identity = 187/212 (88.21%), Postives = 194/212 (91.51%), Query Frame = 0

Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCXXXXXXXXXXXXKAISNVGIGVLAASVL 60
           MALS LTFTTPRAQASQIF+P+LSS VKPT              KAISN+GIG+LAASVL
Sbjct: 1   MALSPLTFTTPRAQASQIFTPKLSSTVKPT--STSSYSSVSATKKAISNMGIGLLAASVL 60

Query: 61  ALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFA 120
           ALSPLDANATRIEYYATVGEPLCEF YVPSGLGYCD+AVGSGEEVPY ELINVHYTARF+
Sbjct: 61  ALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTARFS 120

Query: 121 DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGPE 180
           DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKL+IPPHLAYGPE
Sbjct: 121 DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPE 180

Query: 181 PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 213
           PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 181 PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 210

BLAST of Carg16013 vs. NCBI nr
Match: XP_023003750.1 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 366.3 bits (939), Expect = 7.0e-98
Identity = 198/213 (92.96%), Postives = 200/213 (93.90%), Query Frame = 0

Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKP-TPCXXXXXXXXXXXXKAISNVGIGVLAASV 60
           MALSSLTFTTPRAQAS+IFSPRLSSAVKP    XXXXXXXXXXXX         VLAASV
Sbjct: 1   MALSSLTFTTPRAQASRIFSPRLSSAVKPXXXXXXXXXXXXXXXXXXXXXXXXXVLAASV 60

Query: 61  LALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARF 120
           LALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARF
Sbjct: 61  LALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARF 120

Query: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGP 180
           ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKL+IPPHLAYGP
Sbjct: 121 ADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAYGP 180

Query: 181 EPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 213
           EPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 181 EPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 213

BLAST of Carg16013 vs. NCBI nr
Match: XP_011657986.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 363.6 bits (932), Expect = 4.5e-97
Identity = 195/215 (90.70%), Postives = 200/215 (93.02%), Query Frame = 0

Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKP---TPCXXXXXXXXXXXXKAISNVGIGVLAA 60
           MALS LTFTTPR QASQIFSP+LSS VKP      XXXXXXXXXXXX  ISN+GIG+LAA
Sbjct: 1   MALSPLTFTTPRPQASQIFSPKLSSTVKPXXXXXXXXXXXXXXXXXXXXISNMGIGLLAA 60

Query: 61  SVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTA 120
           SVLALSPLDANATRIEYYATVGEPLCEF YVPSGLGYCD+AVGSGEEVPY ELINVHYTA
Sbjct: 61  SVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTA 120

Query: 121 RFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAY 180
           RFADGIVFDSSYKR R LTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKL+IPPHLAY
Sbjct: 121 RFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY 180

Query: 181 GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 213
           GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 181 GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 215

BLAST of Carg16013 vs. TAIR10
Match: AT4G39710.1 (FK506-binding protein 16-2)

HSP 1 Score: 282.0 bits (720), Expect = 3.1e-76
Identity = 129/166 (77.71%), Postives = 148/166 (89.16%), Query Frame = 0

Query: 45  KAISNVGIGVLAASVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEE 104
           K +  VG+G LA+S+L+L+PLDA+ATRI+YYATVG+PLCE+ Y  SGLG+CDL VG G+E
Sbjct: 49  KRVFGVGLGFLASSILSLTPLDADATRIDYYATVGDPLCEYSYAKSGLGFCDLDVGFGDE 108

Query: 105 VPYNELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVG 164
            P   L+N+HYTARFADG +FDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPM VG
Sbjct: 109 APRGVLVNIHYTARFADGTLFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMRVG 168

Query: 165 GKRKLKIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGN 211
           GKRKL+IPP LAYGPEPAGCFSGDCNIPGNATL+YDINFV +Y G+
Sbjct: 169 GKRKLQIPPKLAYGPEPAGCFSGDCNIPGNATLLYDINFVEIYPGS 214

BLAST of Carg16013 vs. TAIR10
Match: AT5G45680.1 (FK506-binding protein 13)

HSP 1 Score: 156.8 bits (395), Expect = 1.5e-38
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0

Query: 83  CEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFADGIVFDSSYKRARPLTMRIGVG 142
           CEF   PSGL +CD  VG G E    +LI  HY  +  +G VFDSSY R +PLT RIGVG
Sbjct: 84  CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVG 143

Query: 143 KVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGPEPAGCFSGDCNIPGNATLVYDIN 202
           +VI+G DQGILG +G+PPML GGKR L+IPP LAYG   AGC  G C IP  + L++DI 
Sbjct: 144 EVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIE 203

Query: 203 FVG 206
           ++G
Sbjct: 204 YIG 206

BLAST of Carg16013 vs. TAIR10
Match: AT3G25220.1 (FK506-binding protein 15 kD-1)

HSP 1 Score: 86.7 bits (213), Expect = 1.9e-17
Identity = 48/112 (42.86%), Postives = 59/112 (52.68%), Query Frame = 0

Query: 95  CDLAVGSGEEVPYNELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILG 154
           CDL    G++      I VHY  +  DG VFDSS++R  P+   +G G+VI G DQG+LG
Sbjct: 45  CDLQAHKGDK------IKVHYRGKLTDGTVFDSSFERGDPIEFELGTGQVIPGWDQGLLG 104

Query: 155 GEGVPPMLVGGKRKLKIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGV 207
                   VG KRKLKIP  L YG            IPG ATL++D   V V
Sbjct: 105 A------CVGEKRKLKIPSKLGYGDN-----GSPPKIPGGATLIFDTELVAV 139

BLAST of Carg16013 vs. TAIR10
Match: AT5G48580.1 (FK506- and rapamycin-binding protein 15 kD-2)

HSP 1 Score: 84.7 bits (208), Expect = 7.3e-17
Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 0

Query: 109 ELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRK 168
           + I VHY  +  DG VFDSS++R  P   ++G G+VI+G DQG+LG        VG KRK
Sbjct: 53  DTIKVHYRGKLTDGTVFDSSFERGDPFEFKLGSGQVIKGWDQGLLGA------CVGEKRK 112

Query: 169 LKIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGV 207
           LKIP  L YG +          IPG ATL++D   + V
Sbjct: 113 LKIPAKLGYGEQ-----GSPPTIPGGATLIFDTELIAV 139

BLAST of Carg16013 vs. TAIR10
Match: AT2G43560.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 77.8 bits (190), Expect = 9.0e-15
Identity = 44/115 (38.26%), Postives = 63/115 (54.78%), Query Frame = 0

Query: 90  SGLGYCDLAVGSGEEVPYNELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLD 149
           SGL Y D+ VG G   P    +  +Y A    G +FDSS ++  P   R+G G+VI+GLD
Sbjct: 106 SGLQYKDIKVGRGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGLPYLFRVGSGQVIKGLD 165

Query: 150 QGILGGEGVPPMLVGGKRKLKIPPHLAYGPEPAGCFS--GDCNIPGNATLVYDIN 203
           +GIL       M  GGKR+L IP  LA+   P G  S  G   +  N+ +++D++
Sbjct: 166 EGILS------MKAGGKRRLYIPGPLAF---PKGLVSAPGRPRVAPNSPVIFDVS 211

BLAST of Carg16013 vs. Swiss-Prot
Match: sp|Q9SCY3|PNSL4_ARATH (Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL4 PE=1 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 5.6e-75
Identity = 129/166 (77.71%), Postives = 148/166 (89.16%), Query Frame = 0

Query: 45  KAISNVGIGVLAASVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEE 104
           K +  VG+G LA+S+L+L+PLDA+ATRI+YYATVG+PLCE+ Y  SGLG+CDL VG G+E
Sbjct: 49  KRVFGVGLGFLASSILSLTPLDADATRIDYYATVGDPLCEYSYAKSGLGFCDLDVGFGDE 108

Query: 105 VPYNELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVG 164
            P   L+N+HYTARFADG +FDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPM VG
Sbjct: 109 APRGVLVNIHYTARFADGTLFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMRVG 168

Query: 165 GKRKLKIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGN 211
           GKRKL+IPP LAYGPEPAGCFSGDCNIPGNATL+YDINFV +Y G+
Sbjct: 169 GKRKLQIPPKLAYGPEPAGCFSGDCNIPGNATLLYDINFVEIYPGS 214

BLAST of Carg16013 vs. Swiss-Prot
Match: sp|Q9SCY2|FKB13_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP13 PE=1 SV=2)

HSP 1 Score: 156.8 bits (395), Expect = 2.7e-37
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0

Query: 83  CEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFADGIVFDSSYKRARPLTMRIGVG 142
           CEF   PSGL +CD  VG G E    +LI  HY  +  +G VFDSSY R +PLT RIGVG
Sbjct: 84  CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVG 143

Query: 143 KVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGPEPAGCFSGDCNIPGNATLVYDIN 202
           +VI+G DQGILG +G+PPML GGKR L+IPP LAYG   AGC  G C IP  + L++DI 
Sbjct: 144 EVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIE 203

Query: 203 FVG 206
           ++G
Sbjct: 204 YIG 206

BLAST of Carg16013 vs. Swiss-Prot
Match: sp|Q6CGG3|FKBP2_YARLI (FK506-binding protein 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=FPR2 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.2e-17
Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 0

Query: 109 ELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRK 168
           + ++VHYT +  DG VFDSS +R +P+   +G G+VI G DQGILG      M VG KRK
Sbjct: 49  DTVSVHYTGKLEDGTVFDSSVERGQPIQFPLGTGRVIPGWDQGILG------MCVGEKRK 108

Query: 169 LKIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGV 207
           L IPPHLAYG + AG       IP ++TL++    V +
Sbjct: 109 LTIPPHLAYGKQGAGRV-----IPPDSTLIFTTELVSI 135

BLAST of Carg16013 vs. Swiss-Prot
Match: sp|Q41649|FKB15_VICFA (FK506-binding protein 2 OS=Vicia faba OX=3906 GN=FKBP15 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.1e-17
Identity = 52/131 (39.69%), Postives = 70/131 (53.44%), Query Frame = 0

Query: 76  ATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFADGIVFDSSYKRARPL 135
           A V E     +Y P+    C++    G++V       VHY  +  DG VFDSS++R  P+
Sbjct: 26  ADVTELQIGVKYKPAS---CEVQAHKGDKV------KVHYRGKLTDGTVFDSSFERNSPI 85

Query: 136 TMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGPEPAGCFSGDCNIPGNA 195
              +G G+VI+G DQG+LG      M +G KRKLKIP  L YG +          IPG A
Sbjct: 86  DFELGGGQVIKGWDQGLLG------MCLGEKRKLKIPAKLGYGEQ-----GSPPTIPGGA 136

Query: 196 TLVYDINFVGV 207
           TL++D   VGV
Sbjct: 146 TLIFDTELVGV 136

BLAST of Carg16013 vs. Swiss-Prot
Match: sp|Q54SR7|FKBP2_DICDI (FK506-binding protein 2 OS=Dictyostelium discoideum OX=44689 GN=fkbp2 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.0e-17
Identity = 47/112 (41.96%), Postives = 64/112 (57.14%), Query Frame = 0

Query: 95  CDLAVGSGEEVPYNELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILG 154
           C +   SG++      + +HYT    +G  FDSS  R  P   +IGVG+VI+G DQG+LG
Sbjct: 38  CTVKTKSGDK------LKIHYTGTLLNGDKFDSSVDRGTPFEFKIGVGQVIKGWDQGVLG 97

Query: 155 GEGVPPMLVGGKRKLKIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGV 207
                 M VG KRKL IPP L YG + AG       IPGN+ L++D+  +G+
Sbjct: 98  ------MCVGEKRKLIIPPSLGYGQQGAG-----DKIPGNSHLIFDVELIGI 132

BLAST of Carg16013 vs. TrEMBL
Match: tr|A0A1S3B1J6|A0A1S3B1J6_CUCME (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103484993 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 4.5e-101
Identity = 187/212 (88.21%), Postives = 194/212 (91.51%), Query Frame = 0

Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCXXXXXXXXXXXXKAISNVGIGVLAASVL 60
           MALS LTFTTPRAQASQIF+P+LSS VKPT              KAISN+GIG+LAASVL
Sbjct: 1   MALSPLTFTTPRAQASQIFTPKLSSTVKPT--STSSYSSVSATKKAISNMGIGLLAASVL 60

Query: 61  ALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFA 120
           ALSPLDANATRIEYYATVGEPLCEF YVPSGLGYCD+AVGSGEEVPY ELINVHYTARF+
Sbjct: 61  ALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTARFS 120

Query: 121 DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGPE 180
           DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKL+IPPHLAYGPE
Sbjct: 121 DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPE 180

Query: 181 PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 213
           PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 181 PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 210

BLAST of Carg16013 vs. TrEMBL
Match: tr|A0A0A0KGU0|A0A0A0KGU0_CUCSA (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G500650 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 5.6e-96
Identity = 195/226 (86.28%), Postives = 200/226 (88.50%), Query Frame = 0

Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKP--------------TPCXXXXXXXXXXXXKA 60
           MALS LTFTTPR QASQIFSP+LSS VKP                 XXXXXXXXXXXX  
Sbjct: 56  MALSPLTFTTPRPQASQIFSPKLSSTVKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 115

Query: 61  ISNVGIGVLAASVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVP 120
           ISN+GIG+LAASVLALSPLDANATRIEYYATVGEPLCEF YVPSGLGYCD+AVGSGEEVP
Sbjct: 116 ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP 175

Query: 121 YNELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 180
           Y ELINVHYTARFADGIVFDSSYKR R LTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK
Sbjct: 176 YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 235

Query: 181 RKLKIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 213
           RKL+IPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 236 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 281

BLAST of Carg16013 vs. TrEMBL
Match: tr|A0A2G2Y7H5|A0A2G2Y7H5_CAPAN (Peptidylprolyl isomerase OS=Capsicum annuum OX=4072 GN=T459_30115 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.7e-82
Identity = 150/212 (70.75%), Postives = 174/212 (82.08%), Query Frame = 0

Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCXXXXXXXXXXXXKAISNVGIGVLAASVL 60
           M++SSL+FT P+ Q  Q F+ + ++A     C            K I  VG+G+LAAS++
Sbjct: 1   MSVSSLSFTPPKLQTLQTFTTKPTTAATLKAC-SSHQSTPSINKKQIFQVGVGILAASIV 60

Query: 61  ALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFA 120
           + +PL+A+ATRIEYYAT  EP CEF YV SGLGYCDLAVGSGEE PYN+L+N+HYTARFA
Sbjct: 61  SSAPLNADATRIEYYATTAEPTCEFNYVHSGLGYCDLAVGSGEEAPYNQLVNIHYTARFA 120

Query: 121 DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGPE 180
           DGIVFDSSYKR R LTMR+G+GKVI+GLDQGILGGEGVPPMLVGGKRKL+IPPHLAYGPE
Sbjct: 121 DGIVFDSSYKRGRALTMRLGMGKVIKGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPE 180

Query: 181 PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 213
           PAGCFSGDCNIPGNATLVYDI FV +YSGNRK
Sbjct: 181 PAGCFSGDCNIPGNATLVYDIKFVDIYSGNRK 211

BLAST of Carg16013 vs. TrEMBL
Match: tr|A0A1U8EZH1|A0A1U8EZH1_CAPAN (Peptidylprolyl isomerase OS=Capsicum annuum OX=4072 GN=LOC107851342 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 3.5e-82
Identity = 150/212 (70.75%), Postives = 174/212 (82.08%), Query Frame = 0

Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCXXXXXXXXXXXXKAISNVGIGVLAASVL 60
           M++SSL+FT P+ Q  Q F+ + ++A     C            K I  VG+G+LAAS++
Sbjct: 1   MSVSSLSFTPPKLQTLQAFTTKPTTAATFKAC-SSHQSTPSINKKQIFQVGVGILAASIV 60

Query: 61  ALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFA 120
           + +PL+A+ATRIEYYAT  EP CEF YV SGLGYCDLAVGSGEE PYN+L+N+HYTARFA
Sbjct: 61  SSAPLNADATRIEYYATTAEPTCEFNYVHSGLGYCDLAVGSGEEAPYNQLVNIHYTARFA 120

Query: 121 DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGPE 180
           DGIVFDSSYKR R LTMR+G+GKVI+GLDQGILGGEGVPPMLVGGKRKL+IPPHLAYGPE
Sbjct: 121 DGIVFDSSYKRGRALTMRLGMGKVIKGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPE 180

Query: 181 PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 213
           PAGCFSGDCNIPGNATLVYDI FV +YSGNRK
Sbjct: 181 PAGCFSGDCNIPGNATLVYDIKFVDIYSGNRK 211

BLAST of Carg16013 vs. TrEMBL
Match: tr|A0A2G3B2P5|A0A2G3B2P5_CAPCH (Peptidylprolyl isomerase OS=Capsicum chinense OX=80379 GN=BC332_30533 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 3.5e-82
Identity = 150/212 (70.75%), Postives = 174/212 (82.08%), Query Frame = 0

Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCXXXXXXXXXXXXKAISNVGIGVLAASVL 60
           M++SSL+FT P+ Q  Q F+ + ++A     C            K I  VG+G+LAAS++
Sbjct: 1   MSVSSLSFTPPKLQTLQAFTTKPTTAATFKAC-SSHQSTPSINKKQIFQVGVGILAASIV 60

Query: 61  ALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFA 120
           + +PL+A+ATRIEYYAT  EP CEF YV SGLGYCDLAVGSGEE PYN+L+N+HYTARFA
Sbjct: 61  SSAPLNADATRIEYYATTAEPTCEFNYVHSGLGYCDLAVGSGEEAPYNQLVNIHYTARFA 120

Query: 121 DGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGPE 180
           DGIVFDSSYKR R LTMR+G+GKVI+GLDQGILGGEGVPPMLVGGKRKL+IPPHLAYGPE
Sbjct: 121 DGIVFDSSYKRGRALTMRLGMGKVIKGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPE 180

Query: 181 PAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 213
           PAGCFSGDCNIPGNATLVYDI FV +YSGNRK
Sbjct: 181 PAGCFSGDCNIPGNATLVYDIKFVDIYSGNRK 211

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022962734.12.8e-10793.87photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita mosch... [more]
XP_023517456.11.4e-10694.34photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita pepo ... [more]
XP_008440633.16.7e-10188.21PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucu... [more]
XP_023003750.17.0e-9892.96photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita maxim... [more]
XP_011657986.14.5e-9790.70PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isofo... [more]
Match NameE-valueIdentityDescription
AT4G39710.13.1e-7677.71FK506-binding protein 16-2[more]
AT5G45680.11.5e-3856.91FK506-binding protein 13[more]
AT3G25220.11.9e-1742.86FK506-binding protein 15 kD-1[more]
AT5G48580.17.3e-1743.88FK506- and rapamycin-binding protein 15 kD-2[more]
AT2G43560.19.0e-1538.26FKBP-like peptidyl-prolyl cis-trans isomerase family protein[more]
Match NameE-valueIdentityDescription
sp|Q9SCY3|PNSL4_ARATH5.6e-7577.71Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis t... [more]
sp|Q9SCY2|FKB13_ARATH2.7e-3756.91Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thalian... [more]
sp|Q6CGG3|FKBP2_YARLI3.2e-1746.94FK506-binding protein 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=2845... [more]
sp|Q41649|FKB15_VICFA4.1e-1739.69FK506-binding protein 2 OS=Vicia faba OX=3906 GN=FKBP15 PE=1 SV=1[more]
sp|Q54SR7|FKBP2_DICDI7.0e-1741.96FK506-binding protein 2 OS=Dictyostelium discoideum OX=44689 GN=fkbp2 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A1S3B1J6|A0A1S3B1J6_CUCME4.5e-10188.21Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103484993 PE=4 SV=1[more]
tr|A0A0A0KGU0|A0A0A0KGU0_CUCSA5.6e-9686.28Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G500650 PE=4 SV=1[more]
tr|A0A2G2Y7H5|A0A2G2Y7H5_CAPAN2.7e-8270.75Peptidylprolyl isomerase OS=Capsicum annuum OX=4072 GN=T459_30115 PE=4 SV=1[more]
tr|A0A1U8EZH1|A0A1U8EZH1_CAPAN3.5e-8270.75Peptidylprolyl isomerase OS=Capsicum annuum OX=4072 GN=LOC107851342 PE=4 SV=1[more]
tr|A0A2G3B2P5|A0A2G3B2P5_CAPCH3.5e-8270.75Peptidylprolyl isomerase OS=Capsicum chinense OX=80379 GN=BC332_30533 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023566PPIase_FKBP
IPR001179PPIase_FKBP_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16013-RACarg16013-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.50.40coord: 82..206
e-value: 2.4E-38
score: 133.0
NoneNo IPR availablePANTHERPTHR10516:SF269PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTICcoord: 1..211
NoneNo IPR availableSUPERFAMILYSSF54534FKBP-likecoord: 85..206
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 109..202
e-value: 4.9E-24
score: 84.4
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 108..207
score: 23.893
IPR023566Peptidyl-prolyl cis-trans isomerase, FKBP-typePANTHERPTHR10516PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 1..211