Carg16013 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGGCCGATACTCCGCCGCCACTCATTCAAACACTGCCGCAAAGGATCAGACAGAGCACAGTCCGATCATACTGAAATGGCGCTCTCTTCATTAACCTTCACAACCCCAAGAGCTCAGGCTTCCCAAATTTTCAGCCCCAGATTATCTTCCGCCGTTAAACCCACCCCTTGTTGTTCTTCTTCTTCTTCCTCAGTTTCTGCTGCTAAGAAGGCAATATCTAATGTGGGCATTGGGGTTCTTGCTGCTTCGGTTCTGGCTCTGTCGCCTTTGGATGCTAACGCTACCAGGATTGAATACTATGCGACTGTTGGAGAACCCCTTTGCGAGTTCAGATATGTTCCTTCCGGCCTTGGCTATTGCGACCTTGCCGTGGGATCCGGTGAGGAAGTTCCTTATAATGAGCTTATCAATGTCAGTTCCTAACTTCGATTTTGAAGTTTGTTTCTCGCTTACCATCAAATTGAAGTGCTCTTGCATTGCTTTTGTTGCAATCGCTAATTCCCTCCAATGCCTACTTTTTGCAATTTGCTAATGAAATGTTCTTCAATTGATAATCGTTTCATAAAATCATACAGGATTTTGTGAATTGTTGTGGGCTTATGTACCTTTTAAATGCAGGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGATAGCAGTTACAAGCGAGCTAGACCTCTCACCATGCGCATTGGTGTAGGCAAGGTATTTGATGAAATGTTTTGTACAGTTTCTTAAGGTAGGTTGAAAAGTGTGTACAATTTATTCGAAAGTGAGCAACTACAGCCTTTGGGAGCAATGGAGGAAAGGTCTCGGTTATCAAGATGAGAGGGTACTGAAAATTTTTCTCCTCCCATCCGCTGATTAGGAGTAAGAATGTGAGATCCCACATTGGTCGGAAAGAAGAACGAAACATTCATTATAAGGGTGTGGAAATCTTTCCCTAGTAGACGCGTTTTATAACCGTGAAGCTGATGGCGATACGAAACGGGCCAAAACAGACAATATCTGCTAGCGATGGGCTTGAGCTGTAACAAATGGTATCAAAGCCAGGCACCGAGCGGTGTGCCAACGAGGACGTTGGGTCCCCAAGGAGGGTGGATTGTGAGATCTCACATCAGTTGGAGAGGAGAACGATACATTCCTTGTAAGAGTGTGGAAACCTATCCCTAGTAGAAGTGTTTTAAAACCGTGAGGCTGACAACTATACATAACGAGCCAAAACAGACAATATCTGCTAGCGGTGGGCTTAGACTGTTACAAATGGTATCAGAGCTAGACACCGAGCAGTGTGCCAGCGAGGATGCTGGGACCTCAAGAGGGTGGATTGAGAGATACCATGTTGGTTGGAGAGGAGAACGAAACATTCCCTATAAGGATGTGGAAACCTCTACCTAGTAGATGCGTTTTAAAACCGTGAGGCTGGTGGCGACACGTAATAGACCAAAGTAGACAATATCTGTTAGCGGTGGGCTTGAGTTGTTACAAAGAAACTACTTGTAAAACCGACCCTTAATACTTGCAACCAATCTTAAAAATAGACACAATATGGATGAATAATTCATTAACTAAGTGGCTAACTACACTCATTTCCCTTTGTTGAGTAGTATGTTAAGTGGGTTTAGTTGCAAGTTTGTGACTGATTGGAAGATTAGTATTGATTAGTTTGTGACCAGGTAATAAGAGGCTTGGATCAGGGAATATTAGGAGGTGAAGGAGTACCTCCAATGCTAGTAGGTATGTCTACAGGCATAATGAGTAGGATTTTGTGGCTACTTTTACTTCTTATTGGCTTCTAAGAATCATTGCCCCGCTGATTTTGCCTAGGTGGGAAACGTAAACTTAAGATTCCTCCACATTTAGCATATGGTCCAGAGCCAGCAGGCTGCTTTTCAGGTCGAGTTCTTTAAACCAAACAGCTTTTGTTTTGAGCTTTGGCTATCTAAATCTTCATGAACATGTCTCAAATTGCCTGTGATTCCTTCTTGTAGGAATTATTACTGTAGTTTACTGTTTGGTTAATGCCATTTGTGTTGCCTTTACAGGTGACTGCAATATACCTGGAAATGCAACTCTTGTGTATGATATAAACTTCGTAGGAGTCTACTCCGGAAATAGGAAGTGAAGGAAATGATATCCATTTTCCTACAAATTTCTTGTAGATAGACAACACAGAATAAGTGAGTTTCTGACTTTTCTATTATATTCAATCATATAAACCTTCGCGTTGTTAGTTTCTCTTTGAAGTTATACTCACGACACAGCTATTTGAATACATCCCATTTCGTTTTTCTCCCACGTCAAAAAGTAGAACCACACTGATATTTGGGATATGCATCTAACAGCCCGTTACGTATCACCATCAGTTTCACGGTTCTAAAACATGTCTACTAGGGAGAGATTTCCACACCCTTATTAGGAATGTTTCGTTCCTCTATCCAACCAATGTGGGATCTCACAATGCAT AATGGCCGATACTCCGCCGCCACTCATTCAAACACTGCCGCAAAGGATCAGACAGAGCACAGTCCGATCATACTGAAATGGCGCTCTCTTCATTAACCTTCACAACCCCAAGAGCTCAGGCTTCCCAAATTTTCAGCCCCAGATTATCTTCCGCCGTTAAACCCACCCCTTGTTGTTCTTCTTCTTCTTCCTCAGTTTCTGCTGCTAAGAAGGCAATATCTAATGTGGGCATTGGGGTTCTTGCTGCTTCGGTTCTGGCTCTGTCGCCTTTGGATGCTAACGCTACCAGGATTGAATACTATGCGACTGTTGGAGAACCCCTTTGCGAGTTCAGATATGTTCCTTCCGGCCTTGGCTATTGCGACCTTGCCGTGGGATCCGGTGAGGAAGTTCCTTATAATGAGCTTATCAATGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGATAGCAGTTACAAGCGAGCTAGACCTCTCACCATGCGCATTGGTGTAGGCAAGGTAATAAGAGGCTTGGATCAGGGAATATTAGGAGGTGAAGGAGTACCTCCAATGCTAGTAGGTGGGAAACGTAAACTTAAGATTCCTCCACATTTAGCATATGGTCCAGAGCCAGCAGGCTGCTTTTCAGGTGACTGCAATATACCTGGAAATGCAACTCTTGTGTATGATATAAACTTCGTAGGAGTCTACTCCGGAAATAGGAAGTGAAGGAAATGATATCCATTTTCCTACAAATTTCTTGTAGATAGACAACACAGAATAAGTGAGTTTCTGACTTTTCTATTATATTCAATCATATAAACCTTCGCGTTGTTAGTTTCTCTTTGAAGTTATACTCACGACACAGCTATTTGAATACATCCCATTTCGTTTTTCTCCCACGTCAAAAAGTAGAACCACACTGATATTTGGGATATGCATCTAACAGCCCGTTACGTATCACCATCAGTTTCACGGTTCTAAAACATGTCTACTAGGGAGAGATTTCCACACCCTTATTAGGAATGTTTCGTTCCTCTATCCAACCAATGTGGGATCTCACAATGCAT ATGGCGCTCTCTTCATTAACCTTCACAACCCCAAGAGCTCAGGCTTCCCAAATTTTCAGCCCCAGATTATCTTCCGCCGTTAAACCCACCCCTTGTTGTTCTTCTTCTTCTTCCTCAGTTTCTGCTGCTAAGAAGGCAATATCTAATGTGGGCATTGGGGTTCTTGCTGCTTCGGTTCTGGCTCTGTCGCCTTTGGATGCTAACGCTACCAGGATTGAATACTATGCGACTGTTGGAGAACCCCTTTGCGAGTTCAGATATGTTCCTTCCGGCCTTGGCTATTGCGACCTTGCCGTGGGATCCGGTGAGGAAGTTCCTTATAATGAGCTTATCAATGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGATAGCAGTTACAAGCGAGCTAGACCTCTCACCATGCGCATTGGTGTAGGCAAGGTAATAAGAGGCTTGGATCAGGGAATATTAGGAGGTGAAGGAGTACCTCCAATGCTAGTAGGTGGGAAACGTAAACTTAAGATTCCTCCACATTTAGCATATGGTCCAGAGCCAGCAGGCTGCTTTTCAGGTGACTGCAATATACCTGGAAATGCAACTCTTGTGTATGATATAAACTTCGTAGGAGTCTACTCCGGAAATAGGAAGTGA MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCCSSSSSSVSAAKKAISNVGIGVLAASVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLKIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
BLAST of Carg16013 vs. NCBI nr
Match: XP_022962734.1 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita moschata]) HSP 1 Score: 397.5 bits (1020), Expect = 2.8e-107 Identity = 199/212 (93.87%), Postives = 200/212 (94.34%), Query Frame = 0
BLAST of Carg16013 vs. NCBI nr
Match: XP_023517456.1 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 395.2 bits (1014), Expect = 1.4e-106 Identity = 200/212 (94.34%), Postives = 200/212 (94.34%), Query Frame = 0
BLAST of Carg16013 vs. NCBI nr
Match: XP_008440633.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo] >XP_008440634.1 PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo] >XP_008440635.1 PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo]) HSP 1 Score: 376.3 bits (965), Expect = 6.7e-101 Identity = 187/212 (88.21%), Postives = 194/212 (91.51%), Query Frame = 0
BLAST of Carg16013 vs. NCBI nr
Match: XP_023003750.1 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita maxima]) HSP 1 Score: 366.3 bits (939), Expect = 7.0e-98 Identity = 198/213 (92.96%), Postives = 200/213 (93.90%), Query Frame = 0
BLAST of Carg16013 vs. NCBI nr
Match: XP_011657986.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 363.6 bits (932), Expect = 4.5e-97 Identity = 195/215 (90.70%), Postives = 200/215 (93.02%), Query Frame = 0
BLAST of Carg16013 vs. TAIR10
Match: AT4G39710.1 (FK506-binding protein 16-2) HSP 1 Score: 282.0 bits (720), Expect = 3.1e-76 Identity = 129/166 (77.71%), Postives = 148/166 (89.16%), Query Frame = 0
BLAST of Carg16013 vs. TAIR10
Match: AT5G45680.1 (FK506-binding protein 13) HSP 1 Score: 156.8 bits (395), Expect = 1.5e-38 Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0
BLAST of Carg16013 vs. TAIR10
Match: AT3G25220.1 (FK506-binding protein 15 kD-1) HSP 1 Score: 86.7 bits (213), Expect = 1.9e-17 Identity = 48/112 (42.86%), Postives = 59/112 (52.68%), Query Frame = 0
BLAST of Carg16013 vs. TAIR10
Match: AT5G48580.1 (FK506- and rapamycin-binding protein 15 kD-2) HSP 1 Score: 84.7 bits (208), Expect = 7.3e-17 Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 0
BLAST of Carg16013 vs. TAIR10
Match: AT2G43560.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 77.8 bits (190), Expect = 9.0e-15 Identity = 44/115 (38.26%), Postives = 63/115 (54.78%), Query Frame = 0
BLAST of Carg16013 vs. Swiss-Prot
Match: sp|Q9SCY3|PNSL4_ARATH (Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL4 PE=1 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 5.6e-75 Identity = 129/166 (77.71%), Postives = 148/166 (89.16%), Query Frame = 0
BLAST of Carg16013 vs. Swiss-Prot
Match: sp|Q9SCY2|FKB13_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP13 PE=1 SV=2) HSP 1 Score: 156.8 bits (395), Expect = 2.7e-37 Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0
BLAST of Carg16013 vs. Swiss-Prot
Match: sp|Q6CGG3|FKBP2_YARLI (FK506-binding protein 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=FPR2 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 3.2e-17 Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 0
BLAST of Carg16013 vs. Swiss-Prot
Match: sp|Q41649|FKB15_VICFA (FK506-binding protein 2 OS=Vicia faba OX=3906 GN=FKBP15 PE=1 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.1e-17 Identity = 52/131 (39.69%), Postives = 70/131 (53.44%), Query Frame = 0
BLAST of Carg16013 vs. Swiss-Prot
Match: sp|Q54SR7|FKBP2_DICDI (FK506-binding protein 2 OS=Dictyostelium discoideum OX=44689 GN=fkbp2 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 7.0e-17 Identity = 47/112 (41.96%), Postives = 64/112 (57.14%), Query Frame = 0
BLAST of Carg16013 vs. TrEMBL
Match: tr|A0A1S3B1J6|A0A1S3B1J6_CUCME (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103484993 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 4.5e-101 Identity = 187/212 (88.21%), Postives = 194/212 (91.51%), Query Frame = 0
BLAST of Carg16013 vs. TrEMBL
Match: tr|A0A0A0KGU0|A0A0A0KGU0_CUCSA (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G500650 PE=4 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 5.6e-96 Identity = 195/226 (86.28%), Postives = 200/226 (88.50%), Query Frame = 0
BLAST of Carg16013 vs. TrEMBL
Match: tr|A0A2G2Y7H5|A0A2G2Y7H5_CAPAN (Peptidylprolyl isomerase OS=Capsicum annuum OX=4072 GN=T459_30115 PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 2.7e-82 Identity = 150/212 (70.75%), Postives = 174/212 (82.08%), Query Frame = 0
BLAST of Carg16013 vs. TrEMBL
Match: tr|A0A1U8EZH1|A0A1U8EZH1_CAPAN (Peptidylprolyl isomerase OS=Capsicum annuum OX=4072 GN=LOC107851342 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 3.5e-82 Identity = 150/212 (70.75%), Postives = 174/212 (82.08%), Query Frame = 0
BLAST of Carg16013 vs. TrEMBL
Match: tr|A0A2G3B2P5|A0A2G3B2P5_CAPCH (Peptidylprolyl isomerase OS=Capsicum chinense OX=80379 GN=BC332_30533 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 3.5e-82 Identity = 150/212 (70.75%), Postives = 174/212 (82.08%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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