CsGy6G029950 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G029950
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Peptidyl-prolyl cis-trans isomerase
Location	Chr6 : 28354624 .. 28357498 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTTTCCCCATTAACCTTCACAACCCCAAGACCTCAAGCTTCCCAAATTTTCTCCCCCAAGTTATCTTCCACTGTTAAACCCACATCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGTTTCTGCTACTAAGAAGGCAATATCTAACATGGGCATTGGCCTTCTTGCTGCTTCGGTTTTGGCTCTTTCGCCCTTGGATGCAAACGCTACCAGAATTGAATACTATGCCACTGTTGGAGAACCCCTTTGCGAGTTCAACTATGTGCCTTCCGGGCTTGGCTATTGCGACATCGCCGTCGGATCCGGTGAGGAAGTTCCTTATGGTGAGCTTATCAATGTCAGTTCCGATCTTCAATCATCCACTTCTTGTTTCTCATTTTACTTTTCTTCGCATCATCAAATTCTACCCTGCTTTTATATGACTGCTTGTTTCCGTCCAACTTCTCCTGCATTGCTTCGTTGCAGTGGAATGTGCAATTCCCGCCAATAGTATATCAATCTAATATGTGTCTCTCGTTTTTTGCTGAGTTTGCATGTGGGTTATTTTTCTTAATATGTATATGTTGTGTCACGTGTTGCAATGAACTGCAATTCACTACGTTTAATTTCCCCATTCCACGCATAAGGGATTTTATGATATGTTTTTGCGTTATTTTACCGTTCAAATGCAGGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGACAGTAGCTACAAGCGTGGTAGATATCTCACCATGCGTATTGGTGTTGGCAAGGTATTGATCAAGTGTTTTGTACAGCTTCTTAAGGTGCATATGGGCTTGAAAAGTTTGGCCAATTTGTTTAAGTGCGAGCGGCTACAGGCTTTGAGAGTAATGATACTGTTTAAGAGAAAAGTGATGAAAATATATGTATTTTAGGTCATTGGTAACTTAGTCCATTTCTGCACTTTCCAGATCATGTCGTTTCTTTAGGAAAACGTAGTTGAGCAGAATTCAATTGTACTTATAACTATGAGAAAAAAAAAAAGCAAATTTAATTAGAGTAAAACGGTCAGCAGAATAGCTTTTCTAGGATTGAGGAACATCTCTCTTTGTCCCATCTTAATAAAATACGCACCTTGCTGCATCAACTTGGTTGACAATCACCTCCCTATATGCAACTATCTTCTAAGAGACCTTGTGTGGAGTTAGTTCTCCTACAAATCCCAATTGTTTGTTGACGAGGATGTAGAAAGAAAGTGGTGGGTTTCTTTAACGATTTGACAAGGAAAGAGCTGGATGAGAGTGGAGGCAAGTCTGTTACCAACATGGGAGGATCAGGGTACTGAGAATTTTCCTTCTCATGCCTAGATTAGGAGCAAGATACTATTTGTAAAACAAACTTTTAATTTACTTGCAACCAATCAATAGCCATTATATGGATAAATAATTCATTACCTTAGCCACTAACTATAACTACATTCATTTCACCTTGTGGTGAGTGTGGGACCGTGGGTAACTGGGTGGGTGTAGTTACTTACCACATTGACTCATCGGAAAGGGACTAAAGTTGATAAGATTGTTGCCAGGTAATAAGAGGATTGGATCAGGGAATATTAGGGGGTGAAGGAGTACCACCAATGCTAGTAGGTATGTCTACTGACGCAATGAGTAGAATTTTGTGGTTTTCTTTTTTTGCTGGTTTGCTTCTAAGAAATTATTGCCCCTCTGATTTTGCCTAGGTGGCAAACGTAAGCTTCAGATTCCTCCACATTTAGCGTATGGACCAGAACCAGCAGGCTGTTTTTCAGGTTGAATTCTTTGAACTGAACTGCTTTGTTTTGCGTGTTGGCTATCTAAATTTTCGTGACAATGTTGCAAGCTGTCTGTAGTTGCTTCTGTTGGCAAGTTAACGGTAGTTTATTTTGTGCAAATGCATTATATGTTAGTGTGTAGTTGCTTTGCTCCAGATATCTCTTTTTGATACTGGTGAAACCCAAGTACCAATTAACTAATGGACTCTGTTAATGCCATTTGTGTTGCCTTTACAGGTGATTGCAATATACCTGGAAATGCAACTCTTGTGTATGATATAAATTTCGTTGGAGTCTACTCAGGAAATAGGAAGTGATGGAAACAATACCCAATTTCCTACAAAATTCTTGTAGATAGACAACACAGAGTAAGTGATTTTCTGACTTTTCTAAATGTTCAATCATATCAACCTATCCTTTGTTTGGTTTCTCTTTTAAGTTGTGTTCACAGCTCAGCTATCTTAACACACCCATTTGTTTTTTGGTCCATCTCATACAGTAGAATCACAACAATTATCTCAGTAGTGTCTCAGATTCCATTTCATGCTTCCTGCTTCATCTATTGTTCATCATACACTTTTTCCCTCTTGGTTTCCCAGAACTTAAGTTGAAGCTAAACCACGAGCCAAAAGAAGTGCATTTCTCTCTGGATTTTCCAAGTATGTGGAACTCAAGCTTGACTCTTAAGGCAGAATACTTGGTTTTCTCCAACTAACCACCAGCAGGACTGGCAATCCTTTTTAGGTGAAAATCCAGCTAGGCATGGTTGAAATTGCTCAATTCAAACGTAATTGACCAAAACTATGTATTTGGTTGTTTTACAAGATTATGACTGTATTTCTATGCACGGATACTATTATACTTTGTAAAAGCACGTCTTGTTTCTGAGTACTTCAGTAACTTTATGCAAATGGAATCTAATGACCGCATTTTCTTTGAACACATTCTTTTTTAATATGATCGAATTGTCAATGAACACAAAATTATTAAACATAGATCACCCTAATTTTTTCTCACCGCGATTTTTCTTTATGCTACCTTTGGATATGAGAAAAAGGTTAACGGAAAAAAAATGTTCCGAAAG

mRNA sequence

ATGGCACTTTCCCCATTAACCTTCACAACCCCAAGACCTCAAGCTTCCCAAATTTTCTCCCCCAAGTTATCTTCCACTGTTAAACCCACATCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGTTTCTGCTACTAAGAAGGCAATATCTAACATGGGCATTGGCCTTCTTGCTGCTTCGGTTTTGGCTCTTTCGCCCTTGGATGCAAACGCTACCAGAATTGAATACTATGCCACTGTTGGAGAACCCCTTTGCGAGTTCAACTATGTGCCTTCCGGGCTTGGCTATTGCGACATCGCCGTCGGATCCGGTGAGGAAGTTCCTTATGGTGAGCTTATCAATGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGACAGTAGCTACAAGCGTGGTAGATATCTCACCATGCGTATTGGTGTTGGCAAGGTAATAAGAGGATTGGATCAGGGAATATTAGGGGGTGAAGGAGTACCACCAATGCTAGTAGGTGGCAAACGTAAGCTTCAGATTCCTCCACATTTAGCGTATGGACCAGAACCAGCAGGCTGTTTTTCAGGTGATTGCAATATACCTGGAAATGCAACTCTTGTGTATGATATAAATTTCGTTGGAGTCTACTCAGGAAATAGGAAGTGATGGAAACAATACCCAATTTCCTACAAAATTCTTGTAGATAGACAACACAGATAGAATCACAACAATTATCTCAGTAGTGTCTCAGATTCCATTTCATGCTTCCTGCTTCATCTATTGTTCATCATACACTTTTTCCCTCTTGGTTTCCCAGAACTTAAGTTGAAGCTAAACCACGAGCCAAAAGAAGTGCATTTCTCTCTGGATTTTCCAAGTATGTGGAACTCAAGCTTGACTCTTAAGGCAGAATACTTGGTTTTCTCCAACTAACCACCAGCAGGACTGGCAATCCTTTTTAGGTGAAAATCCAGCTAGGCATGGTTGAAATTGCTCAATTCAAACGTAATTGACCAAAACTATGTATTTGGTTGTTTTACAAGATTATGACTGTATTTCTATGCACGGATACTATTATACTTTGTAAAAGCACGTCTTGTTTCTGAGTACTTCAGTAACTTTATGCAAATGGAATCTAATGACCGCATTTTCTTTGAACACATTCTTTTTTAATATGATCGAATTGTCAATGAACACAAAATTATTAAACATAGATCACCCTAATTTTTTCTCACCGCGATTTTTCTTTATGCTACCTTTGGATATGAGAAAAAGGTTAACGGAAAAAAAATGTTCCGAAAG

Coding sequence (CDS)

ATGGCACTTTCCCCATTAACCTTCACAACCCCAAGACCTCAAGCTTCCCAAATTTTCTCCCCCAAGTTATCTTCCACTGTTAAACCCACATCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGTTTCTGCTACTAAGAAGGCAATATCTAACATGGGCATTGGCCTTCTTGCTGCTTCGGTTTTGGCTCTTTCGCCCTTGGATGCAAACGCTACCAGAATTGAATACTATGCCACTGTTGGAGAACCCCTTTGCGAGTTCAACTATGTGCCTTCCGGGCTTGGCTATTGCGACATCGCCGTCGGATCCGGTGAGGAAGTTCCTTATGGTGAGCTTATCAATGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGACAGTAGCTACAAGCGTGGTAGATATCTCACCATGCGTATTGGTGTTGGCAAGGTAATAAGAGGATTGGATCAGGGAATATTAGGGGGTGAAGGAGTACCACCAATGCTAGTAGGTGGCAAACGTAAGCTTCAGATTCCTCCACATTTAGCGTATGGACCAGAACCAGCAGGCTGTTTTTCAGGTGATTGCAATATACCTGGAAATGCAACTCTTGTGTATGATATAAATTTCGTTGGAGTCTACTCAGGAAATAGGAAGTGA

Protein sequence

MALSPLTFTTPRPQASQIFSPKLSSTVKPTSTSSSSSSSSSSVSATKKAISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK

Homology

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BLAST of CsGy6G029950 vs. NCBI nr
Match: XP_011657986.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 9.2e-106
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MALSPLTFTTPRPQASQIFSPKLSSTVKPXXXXXXXXXXXXXXXXXXXXISNMGIGLLAA 60
           MALSPLTFTTPRPQASQIFSPKLSSTVKPXXXXXXXXXXXXXXXXXXXXISNMGIGLLAA
Sbjct: 1   MALSPLTFTTPRPQASQIFSPKLSSTVKPXXXXXXXXXXXXXXXXXXXXISNMGIGLLAA 60

Query: 61  SVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTA 120
           SVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTA
Sbjct: 61  SVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTA 120

Query: 121 RFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY 180
           RFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY
Sbjct: 121 RFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY 180

Query: 181 GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 216
           GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 181 GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 215

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BLAST of CsGy6G029950 vs. NCBI nr
Match: KGN48773.1 (hypothetical protein Csa_6G500650 [Cucumis sativus])

HSP 1 Score: 384.0 bits (985), Expect = 3.3e-103
Identity = 215/226 (95.13%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MALSPLTFTTPRPQASQIFSPKLSSTVKP-----------XXXXXXXXXXXXXXXXXXXX 60
           MALSPLTFTTPRPQASQIFSPKLSSTVKP           XXXXXXXXXXXXXXXXXXXX
Sbjct: 56  MALSPLTFTTPRPQASQIFSPKLSSTVKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 115

Query: 61  ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP 120
           ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP
Sbjct: 116 ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP 175

Query: 121 YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 180
           YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK
Sbjct: 176 YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 235

Query: 181 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 216
           RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 236 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 281

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BLAST of CsGy6G029950 vs. NCBI nr
Match: XP_011657984.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isoform X1 [Cucumis sativus] >XP_004143483.2 PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isoform X1 [Cucumis sativus] >XP_011657985.1 PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 384.0 bits (985), Expect = 3.3e-103
Identity = 215/226 (95.13%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MALSPLTFTTPRPQASQIFSPKLSSTVKP-----------XXXXXXXXXXXXXXXXXXXX 60
           MALSPLTFTTPRPQASQIFSPKLSSTVKP           XXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MALSPLTFTTPRPQASQIFSPKLSSTVKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP 120
           ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP
Sbjct: 61  ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP 120

Query: 121 YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 180
           YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK
Sbjct: 121 YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 180

Query: 181 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 216
           RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 181 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 226

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BLAST of CsGy6G029950 vs. NCBI nr
Match: XP_008440633.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo] >XP_008440634.1 PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo] >XP_008440635.1 PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo])

HSP 1 Score: 376.7 bits (966), Expect = 5.2e-101
Identity = 190/215 (88.37%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 1   MALSPLTFTTPRPQASQIFSPKLSSTVKPXXXXXXXXXXXXXXXXXXXXISNMGIGLLAA 60
           MALSPLTFTTPR QASQIF+PKLSSTVKP                    ISNMGIGLLAA
Sbjct: 1   MALSPLTFTTPRAQASQIFTPKLSSTVKP-----TSTSSYSSVSATKKAISNMGIGLLAA 60

Query: 61  SVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTA 120
           SVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTA
Sbjct: 61  SVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTA 120

Query: 121 RFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY 180
           RF+DGIVFDSSYKR R LTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY
Sbjct: 121 RFSDGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY 180

Query: 181 GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 216
           GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 181 GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 210

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BLAST of CsGy6G029950 vs. NCBI nr
Match: XP_022962734.1 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 363.6 bits (932), Expect = 4.6e-97
Identity = 183/215 (85.12%), Postives = 188/215 (87.44%), Query Frame = 0


Query: 1   MALSPLTFTTPRPQASQIFSPKLSSTVKPXXXXXXXXXXXXXXXXXXXXISNMGIGLLAA 60
           MALS LTFTTPR QASQIFSP+LSS VKP                    ISN+GIG+LAA
Sbjct: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKP-----TPCCSSSSVSATKKAISNVGIGVLAA 60

Query: 61  SVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTA 120
           SVLALSPLDANATRIEYYATVGEPLCEF YVPSGLGYCD+AVGSGEEVPY ELINVHYTA
Sbjct: 61  SVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTA 120

Query: 121 RFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY 180
           RFADGIVFDSSYKR R LTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKL+IPPHLAY
Sbjct: 121 RFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAY 180

Query: 181 GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 216
           GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 181 GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 210

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BLAST of CsGy6G029950 vs. TAIR10
Match: AT4G39710.1 (FK506-binding protein 16-2)

HSP 1 Score: 277.3 bits (708), Expect = 7.8e-75
Identity = 126/164 (76.83%), Postives = 147/164 (89.63%), Query Frame = 0


Query: 50  ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP 109
           +  +G+G LA+S+L+L+PLDA+ATRI+YYATVG+PLCE++Y  SGLG+CD+ VG G+E P
Sbjct: 51  VFGVGLGFLASSILSLTPLDADATRIDYYATVGDPLCEYSYAKSGLGFCDLDVGFGDEAP 110

Query: 110 YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 169
            G L+N+HYTARFADG +FDSSYKR R LTMRIGVGKVIRGLDQGILGGEGVPPM VGGK
Sbjct: 111 RGVLVNIHYTARFADGTLFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMRVGGK 170

Query: 170 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGN 214
           RKLQIPP LAYGPEPAGCFSGDCNIPGNATL+YDINFV +Y G+
Sbjct: 171 RKLQIPPKLAYGPEPAGCFSGDCNIPGNATLLYDINFVEIYPGS 214

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BLAST of CsGy6G029950 vs. TAIR10
Match: AT5G45680.1 (FK506-binding protein 13)

HSP 1 Score: 156.4 bits (394), Expect = 2.0e-38
Identity = 71/123 (57.72%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 86  CEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVG 145
           CEF+  PSGL +CD  VG G E   G+LI  HY  +  +G VFDSSY RG+ LT RIGVG
Sbjct: 84  CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVG 143

Query: 146 KVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDIN 205
           +VI+G DQGILG +G+PPML GGKR L+IPP LAYG   AGC  G C IP  + L++DI 
Sbjct: 144 EVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIE 203

Query: 206 FVG 209
           ++G
Sbjct: 204 YIG 206

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BLAST of CsGy6G029950 vs. TAIR10
Match: AT5G48580.1 (FK506- and rapamycin-binding protein 15 kD-2)

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-16
Identity = 43/99 (43.43%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 111 GELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKR 170
           G+ I VHY  +  DG VFDSS++RG     ++G G+VI+G DQG+LG        VG KR
Sbjct: 52  GDTIKVHYRGKLTDGTVFDSSFERGDPFEFKLGSGQVIKGWDQGLLGA------CVGEKR 111

Query: 171 KLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGV 210
           KL+IP  L YG +          IPG ATL++D   + V
Sbjct: 112 KLKIPAKLGYGEQ-----GSPPTIPGGATLIFDTELIAV 139

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BLAST of CsGy6G029950 vs. TAIR10
Match: AT3G25220.1 (FK506-binding protein 15 kD-1)

HSP 1 Score: 81.6 bits (200), Expect = 6.3e-16
Identity = 44/99 (44.44%), Postives = 55/99 (55.56%), Query Frame = 0


Query: 111 GELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKR 170
           G+ I VHY  +  DG VFDSS++RG  +   +G G+VI G DQG+LG        VG KR
Sbjct: 52  GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGTGQVIPGWDQGLLGA------CVGEKR 111

Query: 171 KLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGV 210
           KL+IP  L YG            IPG ATL++D   V V
Sbjct: 112 KLKIPSKLGYGDN-----GSPPKIPGGATLIFDTELVAV 139

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BLAST of CsGy6G029950 vs. TAIR10
Match: AT5G05420.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-15
Identity = 45/107 (42.06%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 104 SGEEVPYGELINVHYTARF-ADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVP 163
           +G++   G+ ++VHYT +   +G +FDS+  + RY   R+  GKVI+GLD G+ G     
Sbjct: 49  NGKKAEPGKRVSVHYTGKLQGNGKIFDSTVGKSRY-KFRLDAGKVIKGLDVGLNG----- 108

Query: 164 PMLVGGKRKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGV 210
            MLVGGKRKL IPP + YG E AG      +IP ++ LV+D+  + V
Sbjct: 109 -MLVGGKRKLTIPPEMGYGAEGAG------SIPPDSWLVFDVELLNV 142

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BLAST of CsGy6G029950 vs. Swiss-Prot
Match: sp|Q9SCY3|PNSL4_ARATH (Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL4 PE=1 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.4e-73
Identity = 126/164 (76.83%), Postives = 147/164 (89.63%), Query Frame = 0


Query: 50  ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP 109
           +  +G+G LA+S+L+L+PLDA+ATRI+YYATVG+PLCE++Y  SGLG+CD+ VG G+E P
Sbjct: 51  VFGVGLGFLASSILSLTPLDADATRIDYYATVGDPLCEYSYAKSGLGFCDLDVGFGDEAP 110

Query: 110 YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 169
            G L+N+HYTARFADG +FDSSYKR R LTMRIGVGKVIRGLDQGILGGEGVPPM VGGK
Sbjct: 111 RGVLVNIHYTARFADGTLFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMRVGGK 170

Query: 170 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGN 214
           RKLQIPP LAYGPEPAGCFSGDCNIPGNATL+YDINFV +Y G+
Sbjct: 171 RKLQIPPKLAYGPEPAGCFSGDCNIPGNATLLYDINFVEIYPGS 214

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BLAST of CsGy6G029950 vs. Swiss-Prot
Match: sp|Q9SCY2|FKB13_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP13 PE=1 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 3.6e-37
Identity = 71/123 (57.72%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 86  CEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVG 145
           CEF+  PSGL +CD  VG G E   G+LI  HY  +  +G VFDSSY RG+ LT RIGVG
Sbjct: 84  CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVG 143

Query: 146 KVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDIN 205
           +VI+G DQGILG +G+PPML GGKR L+IPP LAYG   AGC  G C IP  + L++DI 
Sbjct: 144 EVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIE 203

Query: 206 FVG 209
           ++G
Sbjct: 204 YIG 206

[Close]

BLAST of CsGy6G029950 vs. Swiss-Prot
Match: sp|Q6CGG3|FKBP2_YARLI (FK506-binding protein 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=FPR2 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.2e-17
Identity = 47/99 (47.47%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 111 GELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKR 170
           G+ ++VHYT +  DG VFDSS +RG+ +   +G G+VI G DQGILG      M VG KR
Sbjct: 48  GDTVSVHYTGKLEDGTVFDSSVERGQPIQFPLGTGRVIPGWDQGILG------MCVGEKR 107

Query: 171 KLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGV 210
           KL IPPHLAYG + AG       IP ++TL++    V +
Sbjct: 108 KLTIPPHLAYGKQGAGRV-----IPPDSTLIFTTELVSI 135

[Close]

BLAST of CsGy6G029950 vs. Swiss-Prot
Match: sp|Q54SR7|FKBP2_DICDI (FK506-binding protein 2 OS=Dictyostelium discoideum OX=44689 GN=fkbp2 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.6e-16
Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 111 GELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKR 170
           G+ + +HYT    +G  FDSS  RG     +IGVG+VI+G DQG+LG      M VG KR
Sbjct: 45  GDKLKIHYTGTLLNGDKFDSSVDRGTPFEFKIGVGQVIKGWDQGVLG------MCVGEKR 104

Query: 171 KLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGV 210
           KL IPP L YG + AG       IPGN+ L++D+  +G+
Sbjct: 105 KLIIPPSLGYGQQGAG-----DKIPGNSHLIFDVELIGI 132

[Close]

BLAST of CsGy6G029950 vs. Swiss-Prot
Match: sp|Q6BP84|FKBP2_DEBHA (FK506-binding protein 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=FPR2 PE=3 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 3.5e-16
Identity = 45/104 (43.27%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 111 GELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKR 170
           G+LI+VHY  +  DG VFDSSY RG+ ++ ++G+G+VI+G DQG+        M +G KR
Sbjct: 40  GDLISVHYEGKLEDGTVFDSSYSRGQPISFQLGIGQVIQGWDQGL------TRMCIGEKR 99

Query: 171 KLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNR 215
           KL IP HLAYG    G       IP  ATLV+    V +   ++
Sbjct: 100 KLTIPSHLAYGDRGVG------PIPAKATLVFVAELVDIAGSSK 131

[Close]

BLAST of CsGy6G029950 vs. TrEMBL
Match: tr|A0A0A0KGU0|A0A0A0KGU0_CUCSA (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G500650 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 2.2e-103
Identity = 215/226 (95.13%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MALSPLTFTTPRPQASQIFSPKLSSTVKP-----------XXXXXXXXXXXXXXXXXXXX 60
           MALSPLTFTTPRPQASQIFSPKLSSTVKP           XXXXXXXXXXXXXXXXXXXX
Sbjct: 56  MALSPLTFTTPRPQASQIFSPKLSSTVKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 115

Query: 61  ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP 120
           ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP
Sbjct: 116 ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP 175

Query: 121 YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 180
           YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK
Sbjct: 176 YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 235

Query: 181 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 216
           RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 236 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 281

[Close]

BLAST of CsGy6G029950 vs. TrEMBL
Match: tr|A0A1S3B1J6|A0A1S3B1J6_CUCME (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103484993 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 3.5e-101
Identity = 190/215 (88.37%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 1   MALSPLTFTTPRPQASQIFSPKLSSTVKPXXXXXXXXXXXXXXXXXXXXISNMGIGLLAA 60
           MALSPLTFTTPR QASQIF+PKLSSTVKP                    ISNMGIGLLAA
Sbjct: 1   MALSPLTFTTPRAQASQIFTPKLSSTVKP-----TSTSSYSSVSATKKAISNMGIGLLAA 60

Query: 61  SVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTA 120
           SVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTA
Sbjct: 61  SVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTA 120

Query: 121 RFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY 180
           RF+DGIVFDSSYKR R LTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY
Sbjct: 121 RFSDGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY 180

Query: 181 GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 216
           GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 181 GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 210

[Close]

BLAST of CsGy6G029950 vs. TrEMBL
Match: tr|A0A067LQM8|A0A067LQM8_JATCU (Peptidylprolyl isomerase OS=Jatropha curcas OX=180498 GN=JCGZ_24098 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.8e-82
Identity = 144/166 (86.75%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 50  ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP 109
           I +MGIGLLAAS+LA +P+DANATRIEYYATVG+PLC+FN+V SGLGYCDI+VGSG+E P
Sbjct: 59  IFDMGIGLLAASILAFTPMDANATRIEYYATVGDPLCDFNFVRSGLGYCDISVGSGQEAP 118

Query: 110 YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 169
           YG+L+NVHYTARFADGIVFDSSYKRGR LTMRIGVGKVI+GLDQGILGGEGVPPM +GGK
Sbjct: 119 YGQLVNVHYTARFADGIVFDSSYKRGRPLTMRIGVGKVIKGLDQGILGGEGVPPMQIGGK 178

Query: 170 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 216
           RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDIN +G+YSGNRK
Sbjct: 179 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINLLGIYSGNRK 224

[Close]

BLAST of CsGy6G029950 vs. TrEMBL
Match: tr|A0A2P2K952|A0A2P2K952_RHIMU (Peptidylprolyl isomerase OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 8.0e-82
Identity = 158/222 (71.17%), Postives = 170/222 (76.58%), Query Frame = 0


Query: 3   LSPLTFTTPRPQA---------SQIFSPKLSSTVKPXXXXXXXXXXXXXXXXXXXXISNM 62
           LS L   TP+P A             SP L S  K                     I + 
Sbjct: 6   LSALAIATPKPYAYIHDSNLTSKPTSSPSLVSCFKQSYRDQRPNHSFNSVSVTNKCILDA 65

Query: 63  GIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGEL 122
           GIGLLAASVLALSPLDA+ATRIEYYATVGEPLC+ N+V SGLGYCD++VGSG+E PYGEL
Sbjct: 66  GIGLLAASVLALSPLDADATRIEYYATVGEPLCDLNFVGSGLGYCDVSVGSGKEAPYGEL 125

Query: 123 INVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQ 182
           INVHYTARFADG VFDSSYKRGR LTMRIGVGKVI+GLDQGI GGEGVPPM VGGKRKL+
Sbjct: 126 INVHYTARFADGTVFDSSYKRGRPLTMRIGVGKVIKGLDQGIRGGEGVPPMQVGGKRKLE 185

Query: 183 IPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 216
           IPPHLAYGPEPAGCFSGDCNIPGNATL+YDINFVG+YSGNRK
Sbjct: 186 IPPHLAYGPEPAGCFSGDCNIPGNATLLYDINFVGIYSGNRK 227

[Close]

BLAST of CsGy6G029950 vs. TrEMBL
Match: tr|A0A2C9UQF0|A0A2C9UQF0_MANES (Peptidylprolyl isomerase OS=Manihot esculenta OX=3983 GN=MANES_13G090300 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.3e-81
Identity = 146/164 (89.02%), Postives = 156/164 (95.12%), Query Frame = 0


Query: 52  NMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYG 111
           ++GIGLLAASVLA S +DA+ATRIEYYATVG+PLC+FN+V SGLGYCDI+VGSGEE PYG
Sbjct: 60  DVGIGLLAASVLAFSAMDADATRIEYYATVGDPLCDFNFVRSGLGYCDISVGSGEEAPYG 119

Query: 112 ELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRK 171
           EL+NVHYTARFADGIVFDSSYKRGR LTMRIGVGKVIRGLDQGILGGEGVPPM VGGKRK
Sbjct: 120 ELVNVHYTARFADGIVFDSSYKRGRPLTMRIGVGKVIRGLDQGILGGEGVPPMQVGGKRK 179

Query: 172 LQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 216
           LQIPPHLAYGPEPAGCFSGDCNIP NATLVYDIN VG+YSGNRK
Sbjct: 180 LQIPPHLAYGPEPAGCFSGDCNIPANATLVYDINLVGIYSGNRK 223

The following BLAST results are available for this feature:

BLAST of CsGy6G029950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657986.1	9.2e-106	100.00	PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isofo...	[more]
KGN48773.1	3.3e-103	95.13	hypothetical protein Csa_6G500650 [Cucumis sativus]	[more]
XP_011657984.1	3.3e-103	95.13	PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isofo...	[more]
XP_008440633.1	5.2e-101	88.37	PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucu...	[more]
XP_022962734.1	4.6e-97	85.12	photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita mosch...	[more]

BLAST of CsGy6G029950 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39710.1	7.8e-75	76.83	FK506-binding protein 16-2	[more]
AT5G45680.1	2.0e-38	57.72	FK506-binding protein 13	[more]
AT5G48580.1	2.2e-16	43.43	FK506- and rapamycin-binding protein 15 kD-2	[more]
AT3G25220.1	6.3e-16	44.44	FK506-binding protein 15 kD-1	[more]
AT5G05420.1	1.4e-15	42.06	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]

BLAST of CsGy6G029950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SCY3\|PNSL4_ARATH	1.4e-73	76.83	Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis t...	[more]
sp\|Q9SCY2\|FKB13_ARATH	3.6e-37	57.72	Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thalian...	[more]
sp\|Q6CGG3\|FKBP2_YARLI	3.2e-17	47.47	FK506-binding protein 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=2845...	[more]
sp\|Q54SR7\|FKBP2_DICDI	1.6e-16	45.45	FK506-binding protein 2 OS=Dictyostelium discoideum OX=44689 GN=fkbp2 PE=3 SV=1	[more]
sp\|Q6BP84\|FKBP2_DEBHA	3.5e-16	43.27	FK506-binding protein 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / ...	[more]

BLAST of CsGy6G029950 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KGU0\|A0A0A0KGU0_CUCSA	2.2e-103	95.13	Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G500650 PE=4 SV=1	[more]
tr\|A0A1S3B1J6\|A0A1S3B1J6_CUCME	3.5e-101	88.37	Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103484993 PE=4 SV=1	[more]
tr\|A0A067LQM8\|A0A067LQM8_JATCU	2.8e-82	86.75	Peptidylprolyl isomerase OS=Jatropha curcas OX=180498 GN=JCGZ_24098 PE=4 SV=1	[more]
tr\|A0A2P2K952\|A0A2P2K952_RHIMU	8.0e-82	71.17	Peptidylprolyl isomerase OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
tr\|A0A2C9UQF0\|A0A2C9UQF0_MANES	2.3e-81	89.02	Peptidylprolyl isomerase OS=Manihot esculenta OX=3983 GN=MANES_13G090300 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023566	PPIase_FKBP
IPR001179	PPIase_FKBP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0008150	biological_process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005528	FK506 binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G029950.1	CsGy6G029950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.50.40		coord: 84..209 e-value: 1.9E-38 score: 133.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR10516:SF269	PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC	coord: 22..214
None	No IPR available	SUPERFAMILY	SSF54534	FKBP-like	coord: 88..209
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 110..205 e-value: 3.7E-23 score: 81.5
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50059	FKBP_PPIASE	coord: 111..210 score: 23.658
IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type	PANTHER	PTHR10516	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 22..214

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G029950	Cla014165	Watermelon (97103) v1	cgybwmB468
CsGy6G029950	Csa6G500650	Cucumber (Chinese Long) v2	cgybcuB281
CsGy6G029950	MELO3C007778	Melon (DHL92) v3.5.1	cgybmeB444
CsGy6G029950	ClCG01G018990	Watermelon (Charleston Gray)	cgybwcgB399
CsGy6G029950	CSPI06G30460	Wild cucumber (PI 183967)	cgybcpiB287
CsGy6G029950	CmoCh03G008300	Cucurbita moschata (Rifu)	cgybcmoB811
CsGy6G029950	CmoCh07G005230	Cucurbita moschata (Rifu)	cgybcmoB843
CsGy6G029950	Lsi01G007400	Bottle gourd (USVL1VR-Ls)	cgyblsiB398
CsGy6G029950	Cp4.1LG10g01340	Cucurbita pepo (Zucchini)	cgybcpeB710
CsGy6G029950	MELO3C007778.2	Melon (DHL92) v3.6.1	cgybmedB440
CsGy6G029950	CsaV3_6G045680	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G029950	Cla97C01G018470	Watermelon (97103) v2	cgybwmbB394
CsGy6G029950	Carg16013	Silver-seed gourd	carcgybB0753

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G029950	Wax gourd	cgybwgoB592
CsGy6G029950	Cucurbita maxima (Rimu)	cgybcmaB831
CsGy6G029950	Cucurbita maxima (Rimu)	cgybcmaB861
CsGy6G029950	Cucurbita moschata (Rifu)	cgybcmoB824
CsGy6G029950	Cucurbita pepo (Zucchini)	cgybcpeB808
CsGy6G029950	Cucurbita pepo (Zucchini)	cgybcpeB810
CsGy6G029950	Silver-seed gourd	carcgybB0418
CsGy6G029950	Silver-seed gourd	carcgybB0932