CmoCh07G005230 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G005230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Peptidyl-prolyl cis-trans isomerase
Location	Cmo_Chr07 : 2396868 .. 2399408 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCTCTCTTCATTAACCTTCACAACCCCAAGAGCTCAGGCTTCCCAAATTTTCAGCCCCAGATTATCTTCCGCCGTTAAACCCACCCCTTGTTGTTCTTCTTCCTCAGTTTCTGCTACTAAGAAGGCAATATCTAATGTGGGCATTGGGGTTCTTGCTGCTTCGGTTCTGGCTCTGTCGCCTTTGGATGCTAACGCTACCAGGATTGAATACTATGCAACTGTTGGAGAACCCCTTTGCGAGTTCAGATATGTTCCTTCCGGCCTTGGCTATTGCGACCTTGCCGTGGGATCCGGTGAGGAAGTTCCTTATAATGAGCTTATCAATGTCAGTTCCTAACTTCGATTTTGAAGTTTGTTTCTCGCTTACCATCAAATTGAAATGCTCTTGCATTGCTTCGTTGCAATCGCCAATTCCCTCCAATGCCTACTTTTTGCAATTTGCTAATGAAATGTTCTTCAATTGATAATCGTTTCATAAAATCATACAGGATTTTGTGAATTGTTGTTGGCTTATGTACCTTTTAAATGCAGGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGATAGCAGTTACAAGCGAGCTAGACCTCTCACCATGCGCATTGGTGTAGGCAAGGTATTTGATGAAATGTTTTGTACAGTTTCTTAAGGTAGGTTGAAAAGTGTGTACAATTTATTCGAAAGTGAGCAACTACAGCCTTTGGGAGCAATGGAGGAAAGGTCTCGGTTATCAAGATGGGAGGGTACTGAAAATTTTTCTCCTCCCATGCGTCGATTAGGAGTAAGAATGTGAGATCCCACGTTGGTCGGAAAGGAGAACGAAACATTCATTATAAGGGTGTGGAAATCTTTCCCTAGTAGACGCGTTTTAAAACCGTGAAGCTGATGGCGATACGTAACGGGCCAAAACAGACAATATCTGCTAGCGGTGGGCTTGAGCTGTAACAAATGGTATCAGAGCCAGACACTGAGCGGTGTGCCAACGAGGACGTTGGGTCCCCAAGGAGGGTGGATTGTGAGATCTCATATCAGTTGGAGAGGGGAACAATACATTCCTTGTAAGGGTGTGGAAACCTATCCCTAGTAGACGTGTTTTAAAACCATGAGGCTGACAGCTATACGTAACGAGCCAAAGCAGACAATATCTGCTAGCGGTGGGCTTAGGCTGTTACAAATGTTATCAGAGCTAGACACCGAGCAGTGTGCCAGCGAGGATGCTGGGACCTCAAGAGGGTGGATTGTGAGATACCATGTCGGTTGGAGAGGAGAACGAAACATTTCCTATAAGGATGTGGAAACCTCTACCTAGTAGATGCATTTTAAAACCGTGAGGCTGGTGGCGATACGTAATAGACCAAAGTAGACAATATCTATTAGCGGTGGGCTTGAGTTATTACAAAGAAACTACTTGTAAAACCGACCCTTATTTTACTTGCAACCAATCTTAAAAATAGACAACATGGATGAATAATTCATTAACTAAGTGGATAACTACACTCATTTCCCTTTGTTGAGTAGTATGTTAAGTGGGTTTAGTTGCAAAACACAATGTAATATTAGTTAATTTGTGACTGATTGGAAGATTAATATTGATTAGTTTGTGACCAGGTAATAAGAGGCTTGGATCAGGGAATATTAGGAGGTGAAGGAGTACCTCCAATGCTAGTAGGTATGTCTACAGGCATAATGAGTAGGATTTTGTGGCTACTTTTACTTCTTATTGGCTTCTAAGAATCACTGCCCCGTTGATTTTGCCTAGGTGGGAAACGTAAACTTGAGATTCCTCCACATTTAGCATATGGTCCAGAGCCAGCAGGCTGCTTTTCAGGTCGAGTTCTTTAAACCAAACAGCTTTTGTTTTGAGCTTTGGCTATCTAAATCTTCATGAACATGTCTCAAATTGCCTGTGATTCCTTCTTGTAGGAATTATTACTGTAGTTTACTCTTTGGTTAATGCCATTTGTGTTGCCTTTACAGGTGACTGCAATATACCTGGAAATGCAACTCTTGTGTACGATATAAACTTCGTAGGAGTCTACTCCGGAAATAGGAAGTGAAGGAAATGATATCCATTTTCCTACAAATTTCTTGTAGATAGACAACACAGAATAAGTGAGTTTCTGACTTTTCTATTATATTCAATCATATAAACCTTCTCGTTGTTAGTTTCTCTTTGAAGTTATACTCACGACACAGCTATTTGAATACATCCCATTTCGTTTTTCTCCCATGTCAAAAAGTAGAACCACACTGATATTTGGGATATGCATGTAACAGCCCAAGCCGACCGTTAGTAAATATTTATCCGTTTTGGCCCGTTACGTATCACCATCAGTTTCACGGTTCTAAAACATGTCTACTAGGGAGAGATTTCCACACCTTTATTAGGAATGTTTCGTTCCTCTATCCAACCAATGTGGGATCTCACAATGCATCTCAGATAGGACGTTACCATACTTGCTTCATCCTATATTCATGTGCTTTTTCCCCCTCAGTTAACCTGCACTTTAGTTGAAGCTAAACAACAG

mRNA sequence

ATGGCGCTCTCTTCATTAACCTTCACAACCCCAAGAGCTCAGGCTTCCCAAATTTTCAGCCCCAGATTATCTTCCGCCGTTAAACCCACCCCTTGTTGTTCTTCTTCCTCAGTTTCTGCTACTAAGAAGGCAATATCTAATGTGGGCATTGGGGTTCTTGCTGCTTCGGTTCTGGCTCTGTCGCCTTTGGATGCTAACGCTACCAGGATTGAATACTATGCAACTGTTGGAGAACCCCTTTGCGAGTTCAGATATGTTCCTTCCGGCCTTGGCTATTGCGACCTTGCCGTGGGATCCGGTGAGGAAGTTCCTTATAATGAGCTTATCAATGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGATAGCAGTTACAAGCGAGCTAGACCTCTCACCATGCGCATTGGTGTAGGCAAGGTAATAAGAGGCTTGGATCAGGGAATATTAGGAGGTGAAGGAGTACCTCCAATGCTAGTAGGTGGGAAACGTAAACTTGAGATTCCTCCACATTTAGCATATGGTCCAGAGCCAGCAGGCTGCTTTTCAGGTGACTGCAATATACCTGGAAATGCAACTCTTGTGTACGATATAAACTTCGTAGGAGTCTACTCCGGAAATAGGAAGTGAAGGAAATGATATCCATTTTCCTACAAATTTCTTGTAGATAGACAACACAGAATAAGTGAGTTTCTGACTTTTCTATTATATTCAATCATATAAACCTTCTCGTTGTTAGTTTCTCTTTGAAGTTATACTCACGACACAGCTATTTGAATACATCCCATTTCGTTTTTCTCCCATGTCAAAAAGTAGAACCACACTGATATTTGGGATATGCATGTAACAGCCCAAGCCGACCGTTAGTAAATATTTATCCGTTTTGGCCCGTTACGTATCACCATCAGTTTCACGGTTCTAAAACATGTCTACTAGGGAGAGATTTCCACACCTTTATTAGGAATGTTTCGTTCCTCTATCCAACCAATGTGGGATCTCACAATGCATCTCAGATAGGACGTTACCATACTTGCTTCATCCTATATTCATGTGCTTTTTCCCCCTCAGTTAACCTGCACTTTAGTTGAAGCTAAACAACAG

Coding sequence (CDS)

ATGGCGCTCTCTTCATTAACCTTCACAACCCCAAGAGCTCAGGCTTCCCAAATTTTCAGCCCCAGATTATCTTCCGCCGTTAAACCCACCCCTTGTTGTTCTTCTTCCTCAGTTTCTGCTACTAAGAAGGCAATATCTAATGTGGGCATTGGGGTTCTTGCTGCTTCGGTTCTGGCTCTGTCGCCTTTGGATGCTAACGCTACCAGGATTGAATACTATGCAACTGTTGGAGAACCCCTTTGCGAGTTCAGATATGTTCCTTCCGGCCTTGGCTATTGCGACCTTGCCGTGGGATCCGGTGAGGAAGTTCCTTATAATGAGCTTATCAATGTTCACTACACTGCAAGGTTTGCTGATGGGATAGTGTTTGATAGCAGTTACAAGCGAGCTAGACCTCTCACCATGCGCATTGGTGTAGGCAAGGTAATAAGAGGCTTGGATCAGGGAATATTAGGAGGTGAAGGAGTACCTCCAATGCTAGTAGGTGGGAAACGTAAACTTGAGATTCCTCCACATTTAGCATATGGTCCAGAGCCAGCAGGCTGCTTTTCAGGTGACTGCAATATACCTGGAAATGCAACTCTTGTGTACGATATAAACTTCGTAGGAGTCTACTCCGGAAATAGGAAGTGA

Homology

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BLAST of CmoCh07G005230 vs. Swiss-Prot
Match: PNSL4_ARATH (Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis thaliana GN=PNSL4 PE=1 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.9e-76
Identity = 145/214 (67.76%), Postives = 169/214 (78.97%), Query Frame = 1


Query: 1   MALSSLTFTTP---RAQASQIFSPRLSSAVKPTPCCSSSSVS---ATKKAISNVGIGVLA 60
           MA+S+LT T     R+    IF    SS+     C SSS      + KK +  VG+G LA
Sbjct: 1   MAISTLTLTQSLYTRSFRPTIFFSSSSSSSFSCLCSSSSDCEPKLSVKKRVFGVGLGFLA 60

Query: 61  ASVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYT 120
           +S+L+L+PLDA+ATRI+YYATVG+PLCE+ Y  SGLG+CDL VG G+E P   L+N+HYT
Sbjct: 61  SSILSLTPLDADATRIDYYATVGDPLCEYSYAKSGLGFCDLDVGFGDEAPRGVLVNIHYT 120

Query: 121 ARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLA 180
           ARFADG +FDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPM VGGKRKL+IPP LA
Sbjct: 121 ARFADGTLFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMRVGGKRKLQIPPKLA 180

Query: 181 YGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGN 209
           YGPEPAGCFSGDCNIPGNATL+YDINFV +Y G+
Sbjct: 181 YGPEPAGCFSGDCNIPGNATLLYDINFVEIYPGS 214

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BLAST of CmoCh07G005230 vs. Swiss-Prot
Match: FKB13_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thaliana GN=FKBP13 PE=1 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 3.5e-37
Identity = 70/123 (56.91%), Postives = 84/123 (68.29%), Query Frame = 1


Query: 81  CEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFADGIVFDSSYKRARPLTMRIGVG 140
           CEF   PSGL +CD  VG G E    +LI  HY  +  +G VFDSSY R +PLT RIGVG
Sbjct: 84  CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVG 143

Query: 141 KVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAYGPEPAGCFSGDCNIPGNATLVYDIN 200
           +VI+G DQGILG +G+PPML GGKR L IPP LAYG   AGC  G C IP  + L++DI 
Sbjct: 144 EVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIE 203

Query: 201 FVG 204
           ++G
Sbjct: 204 YIG 206

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BLAST of CmoCh07G005230 vs. Swiss-Prot
Match: FKBP2_YARLI (FK506-binding protein 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=FPR2 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.1e-17
Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 1


Query: 107 ELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRK 166
           + ++VHYT +  DG VFDSS +R +P+   +G G+VI G DQGILG      M VG KRK
Sbjct: 49  DTVSVHYTGKLEDGTVFDSSVERGQPIQFPLGTGRVIPGWDQGILG------MCVGEKRK 108

Query: 167 LEIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGV 205
           L IPPHLAYG + AG       IP ++TL++    V +
Sbjct: 109 LTIPPHLAYGKQGAGRV-----IPPDSTLIFTTELVSI 135

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BLAST of CmoCh07G005230 vs. Swiss-Prot
Match: FKBP2_DICDI (FK506-binding protein 2 OS=Dictyostelium discoideum GN=fkbp2 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.8e-17
Identity = 47/112 (41.96%), Postives = 64/112 (57.14%), Query Frame = 1


Query: 93  CDLAVGSGEEVPYNELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILG 152
           C +   SG++      + +HYT    +G  FDSS  R  P   +IGVG+VI+G DQG+LG
Sbjct: 38  CTVKTKSGDK------LKIHYTGTLLNGDKFDSSVDRGTPFEFKIGVGQVIKGWDQGVLG 97

Query: 153 GEGVPPMLVGGKRKLEIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGV 205
                 M VG KRKL IPP L YG + AG       IPGN+ L++D+  +G+
Sbjct: 98  ------MCVGEKRKLIIPPSLGYGQQGAG-----DKIPGNSHLIFDVELIGI 132

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BLAST of CmoCh07G005230 vs. Swiss-Prot
Match: FKB15_VICFA (FK506-binding protein 2 OS=Vicia faba GN=FKBP15 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.2e-16
Identity = 51/131 (38.93%), Postives = 70/131 (53.44%), Query Frame = 1


Query: 74  ATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFADGIVFDSSYKRARPL 133
           A V E     +Y P+    C++    G++V       VHY  +  DG VFDSS++R  P+
Sbjct: 26  ADVTELQIGVKYKPAS---CEVQAHKGDKV------KVHYRGKLTDGTVFDSSFERNSPI 85

Query: 134 TMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAYGPEPAGCFSGDCNIPGNA 193
              +G G+VI+G DQG+LG      M +G KRKL+IP  L YG +          IPG A
Sbjct: 86  DFELGGGQVIKGWDQGLLG------MCLGEKRKLKIPAKLGYGEQ-----GSPPTIPGGA 136

Query: 194 TLVYDINFVGV 205
           TL++D   VGV
Sbjct: 146 TLIFDTELVGV 136

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BLAST of CmoCh07G005230 vs. TrEMBL
Match: A0A0A0KGU0_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_6G500650 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.7e-102
Identity = 195/226 (86.28%), Postives = 200/226 (88.50%), Query Frame = 1


Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCC----------------SSSSVSATKKA 60
           MALS LTFTTPR QASQIFSP+LSS VKPT                   SSSSVSATKKA
Sbjct: 56  MALSPLTFTTPRPQASQIFSPKLSSTVKPTSTSSSSSSSSSSSSSSSSSSSSSVSATKKA 115

Query: 61  ISNVGIGVLAASVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVP 120
           ISN+GIG+LAASVLALSPLDANATRIEYYATVGEPLCEF YVPSGLGYCD+AVGSGEEVP
Sbjct: 116 ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP 175

Query: 121 YNELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 180
           Y ELINVHYTARFADGIVFDSSYKR R LTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK
Sbjct: 176 YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 235

Query: 181 RKLEIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 211
           RKL+IPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 236 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 281

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BLAST of CmoCh07G005230 vs. TrEMBL
Match: D7SW18_VITVI (Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera GN=VIT_07s0031g01150 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 5.0e-83
Identity = 155/210 (73.81%), Postives = 175/210 (83.33%), Query Frame = 1


Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCCSSSSVSATKKAISNVGIGVLAASVLAL 60
           MA+S+LT  T + Q  Q   P+ S + KP   C    +S+TK+ + +VGIG+LAASV+AL
Sbjct: 1   MAISALTVATVKPQTLQTHHPKPSLSFKPIANC----ISSTKRPVLDVGIGLLAASVVAL 60

Query: 61  SPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFADG 120
           SPL+A ATRIEYYATVGEP CE  +  SGLGYCD+AVGSGEE P+ ELINVHYTARFADG
Sbjct: 61  SPLEATATRIEYYATVGEPNCELNFAKSGLGYCDVAVGSGEEAPFGELINVHYTARFADG 120

Query: 121 IVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAYGPEPA 180
            VFDSSYKRARPLTMRIG GK+I+GLDQGILGGEGVPPMLVGGKRKL IPP LAYGPEPA
Sbjct: 121 TVFDSSYKRARPLTMRIGAGKLIKGLDQGILGGEGVPPMLVGGKRKLRIPPALAYGPEPA 180

Query: 181 GCFSGDCNIPGNATLVYDINFVGVYSGNRK 211
           GCFSGDCNIP NATL+YDINFVG+YSGN K
Sbjct: 181 GCFSGDCNIPANATLLYDINFVGIYSGNAK 206

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BLAST of CmoCh07G005230 vs. TrEMBL
Match: A0A067LQM8_JATCU (Peptidyl-prolyl cis-trans isomerase OS=Jatropha curcas GN=JCGZ_24098 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 8.5e-83
Identity = 155/224 (69.20%), Postives = 182/224 (81.25%), Query Frame = 1


Query: 1   MALSSLTFTTPRAQAS---QIFSPRLSSAVKPTPCCS-----------SSSVSATKKAIS 60
           MALS+   T+P+ + +    +   R  S + P  C S           S+SVS  KK I 
Sbjct: 1   MALSASAITSPKNRFTIHKPLLPSRRISHLSPFSCFSCLSNNKELNFSSNSVSTRKKCIF 60

Query: 61  NVGIGVLAASVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYN 120
           ++GIG+LAAS+LA +P+DANATRIEYYATVG+PLC+F +V SGLGYCD++VGSG+E PY 
Sbjct: 61  DMGIGLLAASILAFTPMDANATRIEYYATVGDPLCDFNFVRSGLGYCDISVGSGQEAPYG 120

Query: 121 ELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRK 180
           +L+NVHYTARFADGIVFDSSYKR RPLTMRIGVGKVI+GLDQGILGGEGVPPM +GGKRK
Sbjct: 121 QLVNVHYTARFADGIVFDSSYKRGRPLTMRIGVGKVIKGLDQGILGGEGVPPMQIGGKRK 180

Query: 181 LEIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 211
           L+IPPHLAYGPEPAGCFSGDCNIPGNATLVYDIN +G+YSGNRK
Sbjct: 181 LQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINLLGIYSGNRK 224

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BLAST of CmoCh07G005230 vs. TrEMBL
Match: K4BSK7_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.8e-80
Identity = 151/211 (71.56%), Postives = 174/211 (82.46%), Query Frame = 1


Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCCSSSSVS-ATKKAISNVGIGVLAASVLA 60
           MA+SSL+FT P+ Q    F+P+ + A       S  S     KK I  +G+G+LAAS++A
Sbjct: 1   MAVSSLSFTLPKLQT---FTPKPTIAATFKASSSHESTPFINKKQIFQMGVGILAASIVA 60

Query: 61  LSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFAD 120
            +PLDA+ATRIEYYAT  EP CEF +V SGLGYCD+AVGSGEE PYN+L+N+HYTARF D
Sbjct: 61  SAPLDADATRIEYYATTAEPTCEFNFVRSGLGYCDIAVGSGEEAPYNKLVNIHYTARFGD 120

Query: 121 GIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAYGPEP 180
           GIVFDSSYKR R LTMR+G+GKVI+GLDQGILGGEGVPPMLVGGKRKL+IPPHLAYGPEP
Sbjct: 121 GIVFDSSYKRGRALTMRLGMGKVIKGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPEP 180

Query: 181 AGCFSGDCNIPGNATLVYDINFVGVYSGNRK 211
           AGCFSGDCNIPGNATLVYDI FV +YSGNRK
Sbjct: 181 AGCFSGDCNIPGNATLVYDIKFVELYSGNRK 208

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BLAST of CmoCh07G005230 vs. TrEMBL
Match: A0A0V0HIL8_SOLCH (Peptidyl-prolyl cis-trans isomerase OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.3e-80
Identity = 151/211 (71.56%), Postives = 175/211 (82.94%), Query Frame = 1


Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCCSSSSVS-ATKKAISNVGIGVLAASVLA 60
           MA+SSL+FT P+ Q    F+P+ + A       S  S     +K I  +G+G+LAAS++A
Sbjct: 1   MAVSSLSFTLPKLQT---FTPKPTIAATFKASSSHESTPFINQKQIFQMGVGILAASIVA 60

Query: 61  LSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFAD 120
            +PL+A+ATRIEYYAT  EP CEF +V SGLGYCD+AVGSGEE PYNEL+N+HYTARFAD
Sbjct: 61  SAPLNADATRIEYYATTAEPTCEFNFVRSGLGYCDIAVGSGEEAPYNELVNIHYTARFAD 120

Query: 121 GIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAYGPEP 180
           GIVFDSSYKR R LTMR+G+GKVI+GLDQGILGGEGVPPMLVGGKRKL+IPPHLAYGPEP
Sbjct: 121 GIVFDSSYKRGRALTMRLGMGKVIKGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPEP 180

Query: 181 AGCFSGDCNIPGNATLVYDINFVGVYSGNRK 211
           AGCFSGDCNIPGNATLVYDI FV +YSGNRK
Sbjct: 181 AGCFSGDCNIPGNATLVYDIKFVELYSGNRK 208

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BLAST of CmoCh07G005230 vs. TAIR10
Match: AT4G39710.1 (AT4G39710.1 FK506-binding protein 16-2)

HSP 1 Score: 286.2 bits (731), Expect = 1.6e-77
Identity = 145/214 (67.76%), Postives = 169/214 (78.97%), Query Frame = 1


Query: 1   MALSSLTFTTP---RAQASQIFSPRLSSAVKPTPCCSSSSVS---ATKKAISNVGIGVLA 60
           MA+S+LT T     R+    IF    SS+     C SSS      + KK +  VG+G LA
Sbjct: 1   MAISTLTLTQSLYTRSFRPTIFFSSSSSSSFSCLCSSSSDCEPKLSVKKRVFGVGLGFLA 60

Query: 61  ASVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYT 120
           +S+L+L+PLDA+ATRI+YYATVG+PLCE+ Y  SGLG+CDL VG G+E P   L+N+HYT
Sbjct: 61  SSILSLTPLDADATRIDYYATVGDPLCEYSYAKSGLGFCDLDVGFGDEAPRGVLVNIHYT 120

Query: 121 ARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLA 180
           ARFADG +FDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPM VGGKRKL+IPP LA
Sbjct: 121 ARFADGTLFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMRVGGKRKLQIPPKLA 180

Query: 181 YGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGN 209
           YGPEPAGCFSGDCNIPGNATL+YDINFV +Y G+
Sbjct: 181 YGPEPAGCFSGDCNIPGNATLLYDINFVEIYPGS 214

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BLAST of CmoCh07G005230 vs. TAIR10
Match: AT5G45680.1 (AT5G45680.1 FK506-binding protein 13)

HSP 1 Score: 156.4 bits (394), Expect = 2.0e-38
Identity = 70/123 (56.91%), Postives = 84/123 (68.29%), Query Frame = 1


Query: 81  CEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFADGIVFDSSYKRARPLTMRIGVG 140
           CEF   PSGL +CD  VG G E    +LI  HY  +  +G VFDSSY R +PLT RIGVG
Sbjct: 84  CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVG 143

Query: 141 KVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAYGPEPAGCFSGDCNIPGNATLVYDIN 200
           +VI+G DQGILG +G+PPML GGKR L IPP LAYG   AGC  G C IP  + L++DI 
Sbjct: 144 EVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIE 203

Query: 201 FVG 204
           ++G
Sbjct: 204 YIG 206

[Close]

BLAST of CmoCh07G005230 vs. TAIR10
Match: AT3G25220.1 (AT3G25220.1 FK506-binding protein 15 kD-1)

HSP 1 Score: 85.1 bits (209), Expect = 5.6e-17
Identity = 47/112 (41.96%), Postives = 59/112 (52.68%), Query Frame = 1


Query: 93  CDLAVGSGEEVPYNELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILG 152
           CDL    G++      I VHY  +  DG VFDSS++R  P+   +G G+VI G DQG+LG
Sbjct: 45  CDLQAHKGDK------IKVHYRGKLTDGTVFDSSFERGDPIEFELGTGQVIPGWDQGLLG 104

Query: 153 GEGVPPMLVGGKRKLEIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGV 205
                   VG KRKL+IP  L YG            IPG ATL++D   V V
Sbjct: 105 A------CVGEKRKLKIPSKLGYGDN-----GSPPKIPGGATLIFDTELVAV 139

[Close]

BLAST of CmoCh07G005230 vs. TAIR10
Match: AT5G48580.1 (AT5G48580.1 FK506- and rapamycin-binding protein 15 kD-2)

HSP 1 Score: 83.2 bits (204), Expect = 2.1e-16
Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 1


Query: 107 ELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRK 166
           + I VHY  +  DG VFDSS++R  P   ++G G+VI+G DQG+LG        VG KRK
Sbjct: 53  DTIKVHYRGKLTDGTVFDSSFERGDPFEFKLGSGQVIKGWDQGLLGA------CVGEKRK 112

Query: 167 LEIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGV 205
           L+IP  L YG +          IPG ATL++D   + V
Sbjct: 113 LKIPAKLGYGEQ-----GSPPTIPGGATLIFDTELIAV 139

[Close]

BLAST of CmoCh07G005230 vs. TAIR10
Match: AT2G43560.1 (AT2G43560.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 78.2 bits (191), Expect = 6.8e-15
Identity = 66/203 (32.51%), Postives = 102/203 (50.25%), Query Frame = 1


Query: 9   TTPRAQASQIFSPRLSSAVKPTPCCSSSSVSATKKAISNVGIGVLAASVLALSPLDANAT 68
           TT    +S+  + R+ ++      C  S++S+ ++A+  V +GV     L++S L A A 
Sbjct: 21  TTKNPNSSRYIAARVIASETREQSCKISNLSSRREAMLLV-LGVSGG--LSMSSLAAYAA 80

Query: 69  RI--EYYATVGEPLCE--FRYVP-----SGLGYCDLAVGSGEEVPYNELINVHYTARFAD 128
            +  E    + E  CE     VP     SGL Y D+ VG G   P    +  +Y A    
Sbjct: 81  GLPPEDKPRLCEAECEKELENVPMVTTESGLQYKDIKVGRGPSPPVGFQVAANYVAMVPS 140

Query: 129 GIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAYGPEP 188
           G +FDSS ++  P   R+G G+VI+GLD+GIL       M  GGKR+L IP  LA+   P
Sbjct: 141 GQIFDSSLEKGLPYLFRVGSGQVIKGLDEGILS------MKAGGKRRLYIPGPLAF---P 200

Query: 189 AGCFS--GDCNIPGNATLVYDIN 201
            G  S  G   +  N+ +++D++
Sbjct: 201 KGLVSAPGRPRVAPNSPVIFDVS 211

[Close]

BLAST of CmoCh07G005230 vs. NCBI nr
Match: gi|659080142|ref|XP_008440633.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-2, chloroplastic [Cucumis melo])

HSP 1 Score: 393.3 bits (1009), Expect = 2.7e-106
Identity = 195/210 (92.86%), Postives = 202/210 (96.19%), Query Frame = 1


Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCCSSSSVSATKKAISNVGIGVLAASVLAL 60
           MALS LTFTTPRAQASQIF+P+LSS VKPT   S SSVSATKKAISN+GIG+LAASVLAL
Sbjct: 1   MALSPLTFTTPRAQASQIFTPKLSSTVKPTSTSSYSSVSATKKAISNMGIGLLAASVLAL 60

Query: 61  SPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTARFADG 120
           SPLDANATRIEYYATVGEPLCEF YVPSGLGYCD+AVGSGEEVPY ELINVHYTARF+DG
Sbjct: 61  SPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTARFSDG 120

Query: 121 IVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAYGPEPA 180
           IVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKL+IPPHLAYGPEPA
Sbjct: 121 IVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPEPA 180

Query: 181 GCFSGDCNIPGNATLVYDINFVGVYSGNRK 211
           GCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 181 GCFSGDCNIPGNATLVYDINFVGVYSGNRK 210

[Close]

BLAST of CmoCh07G005230 vs. NCBI nr
Match: gi|778719254|ref|XP_011657986.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 1.3e-103
Identity = 195/215 (90.70%), Postives = 200/215 (93.02%), Query Frame = 1


Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCC-----SSSSVSATKKAISNVGIGVLAA 60
           MALS LTFTTPR QASQIFSP+LSS VKPT        SSSSVSATKKAISN+GIG+LAA
Sbjct: 1   MALSPLTFTTPRPQASQIFSPKLSSTVKPTSTSSSSSSSSSSVSATKKAISNMGIGLLAA 60

Query: 61  SVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYNELINVHYTA 120
           SVLALSPLDANATRIEYYATVGEPLCEF YVPSGLGYCD+AVGSGEEVPY ELINVHYTA
Sbjct: 61  SVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVPYGELINVHYTA 120

Query: 121 RFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLEIPPHLAY 180
           RFADGIVFDSSYKR R LTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKL+IPPHLAY
Sbjct: 121 RFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAY 180

Query: 181 GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 211
           GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 181 GPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 215

[Close]

BLAST of CmoCh07G005230 vs. NCBI nr
Match: gi|700193569|gb|KGN48773.1| (hypothetical protein Csa_6G500650 [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 2.4e-102
Identity = 195/226 (86.28%), Postives = 200/226 (88.50%), Query Frame = 1


Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCC----------------SSSSVSATKKA 60
           MALS LTFTTPR QASQIFSP+LSS VKPT                   SSSSVSATKKA
Sbjct: 56  MALSPLTFTTPRPQASQIFSPKLSSTVKPTSTSSSSSSSSSSSSSSSSSSSSSVSATKKA 115

Query: 61  ISNVGIGVLAASVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVP 120
           ISN+GIG+LAASVLALSPLDANATRIEYYATVGEPLCEF YVPSGLGYCD+AVGSGEEVP
Sbjct: 116 ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP 175

Query: 121 YNELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 180
           Y ELINVHYTARFADGIVFDSSYKR R LTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK
Sbjct: 176 YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 235

Query: 181 RKLEIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 211
           RKL+IPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 236 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 281

[Close]

BLAST of CmoCh07G005230 vs. NCBI nr
Match: gi|778719244|ref|XP_011657984.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 2.4e-102
Identity = 195/226 (86.28%), Postives = 200/226 (88.50%), Query Frame = 1


Query: 1   MALSSLTFTTPRAQASQIFSPRLSSAVKPTPCC----------------SSSSVSATKKA 60
           MALS LTFTTPR QASQIFSP+LSS VKPT                   SSSSVSATKKA
Sbjct: 1   MALSPLTFTTPRPQASQIFSPKLSSTVKPTSTSSSSSSSSSSSSSSSSSSSSSVSATKKA 60

Query: 61  ISNVGIGVLAASVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVP 120
           ISN+GIG+LAASVLALSPLDANATRIEYYATVGEPLCEF YVPSGLGYCD+AVGSGEEVP
Sbjct: 61  ISNMGIGLLAASVLALSPLDANATRIEYYATVGEPLCEFNYVPSGLGYCDIAVGSGEEVP 120

Query: 121 YNELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 180
           Y ELINVHYTARFADGIVFDSSYKR R LTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK
Sbjct: 121 YGELINVHYTARFADGIVFDSSYKRGRYLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGK 180

Query: 181 RKLEIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 211
           RKL+IPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK
Sbjct: 181 RKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 226

[Close]

BLAST of CmoCh07G005230 vs. NCBI nr
Match: gi|1000946990|ref|XP_015580735.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isoform X1 [Ricinus communis])

HSP 1 Score: 322.0 bits (824), Expect = 7.7e-85
Identity = 159/224 (70.98%), Postives = 184/224 (82.14%), Query Frame = 1


Query: 1   MALSSLTFTTPRAQAS---QIFSPRLSSAVKPTPC-----------CSSSSVSATKKAIS 60
           MA S+L  T+P+   +    +F  + +S++ P  C            SS+SVS  KK I 
Sbjct: 1   MAFSALAITSPKTLFTIHRPVFPSKPTSSLSPFSCFSCLSTHKDANISSNSVSTIKKRIF 60

Query: 61  NVGIGVLAASVLALSPLDANATRIEYYATVGEPLCEFRYVPSGLGYCDLAVGSGEEVPYN 120
           +VGIG+LAAS+L+ +P+DANATRIEYYATVG+PLC+F +V SGLGYCDL+VG+GEE PY 
Sbjct: 61  DVGIGILAASILSFAPMDANATRIEYYATVGDPLCDFTFVRSGLGYCDLSVGTGEEAPYA 120

Query: 121 ELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRK 180
           ELINVHYTARFADGIVFDSSYKR RPLTMRIGVGKV+RGLDQGI GGEGVPPM VGGKRK
Sbjct: 121 ELINVHYTARFADGIVFDSSYKRGRPLTMRIGVGKVLRGLDQGIFGGEGVPPMQVGGKRK 180

Query: 181 LEIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK 211
           L+IPPHLAYGPEPAGCFSGDCNIPGNATLVYDINF+G+YSGNRK
Sbjct: 181 LQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFLGIYSGNRK 224

The following BLAST results are available for this feature:

BLAST of CmoCh07G005230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PNSL4_ARATH	2.9e-76	67.76	Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis t...	[more]
FKB13_ARATH	3.5e-37	56.91	Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thalian...	[more]
FKBP2_YARLI	3.1e-17	46.94	FK506-binding protein 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=FPR2...	[more]
FKBP2_DICDI	6.8e-17	41.96	FK506-binding protein 2 OS=Dictyostelium discoideum GN=fkbp2 PE=3 SV=1	[more]
FKB15_VICFA	1.2e-16	38.93	FK506-binding protein 2 OS=Vicia faba GN=FKBP15 PE=1 SV=1	[more]

BLAST of CmoCh07G005230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGU0_CUCSA	1.7e-102	86.28	Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_6G500650 PE=4 SV=1	[more]
D7SW18_VITVI	5.0e-83	73.81	Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera GN=VIT_07s0031g01150 PE=4 ...	[more]
A0A067LQM8_JATCU	8.5e-83	69.20	Peptidyl-prolyl cis-trans isomerase OS=Jatropha curcas GN=JCGZ_24098 PE=4 SV=1	[more]
K4BSK7_SOLLC	1.8e-80	71.56	Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A0V0HIL8_SOLCH	2.3e-80	71.56	Peptidyl-prolyl cis-trans isomerase OS=Solanum chacoense PE=4 SV=1	[more]

BLAST of CmoCh07G005230 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39710.1	1.6e-77	67.76	FK506-binding protein 16-2	[more]
AT5G45680.1	2.0e-38	56.91	FK506-binding protein 13	[more]
AT3G25220.1	5.6e-17	41.96	FK506-binding protein 15 kD-1	[more]
AT5G48580.1	2.1e-16	42.86	FK506- and rapamycin-binding protein 15 kD-2	[more]
AT2G43560.1	6.8e-15	32.51	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]

BLAST of CmoCh07G005230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080142\|ref\|XP_008440633.1\|	2.7e-106	92.86	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-2, chloroplastic [Cucumis ...	[more]
gi\|778719254\|ref\|XP_011657986.1\|	1.3e-103	90.70	PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isofo...	[more]
gi\|700193569\|gb\|KGN48773.1\|	2.4e-102	86.28	hypothetical protein Csa_6G500650 [Cucumis sativus]	[more]
gi\|778719244\|ref\|XP_011657984.1\|	2.4e-102	86.28	PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isofo...	[more]
gi\|1000946990\|ref\|XP_015580735.1\|	7.7e-85	70.98	PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic isofo...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001179	PPIase_FKBP_dom
IPR023566	PPIase_FKBP

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0061077	chaperone-mediated protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0008150	biological_process
biological_process	GO:0019852	L-ascorbic acid metabolic process
biological_process	GO:0006457	protein folding
biological_process	GO:0044267	cellular protein metabolic process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0044424	intracellular part
cellular_component	GO:0016020	membrane
molecular_function	GO:0005528	FK506 binding
molecular_function	GO:0008447	L-ascorbate oxidase activity
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0031679	NADH dehydrogenase (plastoquinone) activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G005230.1	CmoCh07G005230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 107..200 score: 3.9
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROFILE	PS50059	FKBP_PPIASE	coord: 106..205 score: 23
IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type	PANTHER	PTHR10516	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 4..209 score: 1.4E
None	No IPR available	GENE3D	G3DSA:3.10.50.40		coord: 66..205 score: 3.2
None	No IPR available	PANTHER	PTHR10516:SF269	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-2, CHLOROPLASTIC	coord: 4..209 score: 1.4E
None	No IPR available	unknown	SSF54534	FKBP-like	coord: 83..204 score: 2.55

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G005230	Cucsa.104610	Cucumber (Gy14) v1	cgycmoB0233
CmoCh07G005230	CmaCh07G005260	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G005230	Cla014165	Watermelon (97103) v1	cmowmB816
CmoCh07G005230	Csa6G500650	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G005230	MELO3C007778	Melon (DHL92) v3.5.1	cmomeB793
CmoCh07G005230	ClCG01G018990	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G005230	CSPI06G30460	Wild cucumber (PI 183967)	cmocpiB873
CmoCh07G005230	Lsi01G007400	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G005230	Cp4.1LG10g01340	Cucurbita pepo (Zucchini)	cmocpeB806
CmoCh07G005230	Cp4.1LG19g09760	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G005230	MELO3C007778.2	Melon (DHL92) v3.6.1	cmomedB896
CmoCh07G005230	CsaV3_6G045680	Cucumber (Chinese Long) v3	cmocucB1019
CmoCh07G005230	Cla97C01G018470	Watermelon (97103) v2	cmowmbB849
CmoCh07G005230	Bhi03G000939	Wax gourd	cmowgoB1065
CmoCh07G005230	CsGy6G029950	Cucumber (Gy14) v2	cgybcmoB843
CmoCh07G005230	Carg16013	Silver-seed gourd	carcmoB1029
CmoCh07G005230	Carg00681	Silver-seed gourd	carcmoB0554

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh07G005230	CmoCh03G008300	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G005230	Cucurbita maxima (Rimu)	cmacmoB667
CmoCh07G005230	Cucurbita pepo (Zucchini)	cmocpeB813