Carg23210 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23210
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	L-lactate dehydrogenase
Location	Cucurbita_argyrosperma_scaffold_144 : 383277 .. 384973 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAGTTCATCAGCATCTTCCTTAGGTCCAGGCGGCCTTGACATTTCGCAGGCTTTCTTCAAGCCTGTAAGCGACGCCTCTCCGCCGTCTACCTCTAAGCGCAACACCAAAATCTCCGTCATCGGCGCTGGAAATGTCGGCATGGCCATTGCTCAGACCATCCTCACTCAAGATCTTGCCGATGAACTCGTCCTTGTCGACGCCAAGCCTGACAAACTCCGAGGCGAAATGCTCGATCTCCAACACGCCGCTGCTTTCCTTCCACGCACTAAAATCAGCGCCTCTACCGATTACTCTGTTACTGCCGAGTCCGATCTTTGCATCGTCACTGCTGGTGCTCGCCAGATCGCTGGTGAATCTAGGTTGAATCTGCTGCAGAGGAATGTTGCTCTGTTTCAGAAGATCGTGCCGCCGCTTGTTCAGTACTCTCCCGAGACGATTCTGCTGATCGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAGCTCTCTGGTTTTCCGTCGAATCGAGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTCATCGCTGATCATCTCGACGTTAACGCTCAGGATGTTCAGGTCAGTTTTCCGATCGACATTTCTTCTACCTTCTTTAATCGATTAGTGCTTCTTGTTAATTTGCTGTTGCTGAAAAACTTTCAACTTAGGGTTTGGAACTTTTCGATTTTATCGTTTTTTATTGATTGATATCAAATGTGGCTTAGAATAAGCTTCCCTGAAATTTGGAAGATAATTTCCTAATTTCTGGCAACTAAACCACAATAATTAACAATATACTATACTTTAAATAATATTTAATGGATATTTTCTTTGAATTTTGTTAGATATGGAAAGTTTAGAGATCCATTTGGCACTTTTTAAAGTTAGATGGTTATAGGTGTTTTTTTTGTCTCATTTTGGTCTTACTATATCCTCTAGTGAGCATAGTAAGAGATAAAAACGAGAAAAAAGTATGTTTGAACGTCTTAATGGGAGCTCGTCTGAAAAATGAAGAATGTCGTCAATAGTACTCCTACAAAAAATGGCTCGGGACTGTTATCTATTGAAAATGTAGGGTCAATTTCATGGAATACGAACATTCTGCATAAAACAATTGGTCTTAACTCAGTTTTTTCTCATAATGTTTCAAACGCCTTAAATAGAGTGCTCATGTGTAATTTTAGATGGTAAGGTCTCGTGAACATAGCTATATTTGTTTGAAGGCATACATAGTGGGAGAGCACGGCGACAGCTCGGTGGCGCTATGGTCAAGCATAAGCGTGGGCGGAGTGCCAATACTGAGCTTTCTACAGAATCAACAAATCACCTACGAGAAGGAAACATTAGAGAGCATTCACAAAGAGGTCATAGGCGGGGCTTATGAAGTGATAAACTTGAAGGGCTACACATCGTGGGCGATCGGCTACTCGGTGGCAAGCCTCGCCCGGTCGCTCCTCCGTGACCAGCGTAGGATCCACCCTGTCTCTGTCCTTGCTAAAGGGTTCTACGGCATCAATGGAGGTGAGCTGTTCCTCAGCCTGCCCGCGCAGCTTGGTAGGGGCGGAGTATTGGGGATCACCAATGTGCATCTAACCGACGAGGAGTCGGGACGGCTGAGGGACTCAGCCAACACCATCTTGCAGGTGCAGACCCAGTTGGGGATCTGA

mRNA sequence

ATGGAGAAGAGTTCATCAGCATCTTCCTTAGGTCCAGGCGGCCTTGACATTTCGCAGGCTTTCTTCAAGCCTGTAAGCGACGCCTCTCCGCCGTCTACCTCTAAGCGCAACACCAAAATCTCCGTCATCGGCGCTGGAAATGTCGGCATGGCCATTGCTCAGACCATCCTCACTCAAGATCTTGCCGATGAACTCGTCCTTGTCGACGCCAAGCCTGACAAACTCCGAGGCGAAATGCTCGATCTCCAACACGCCGCTGCTTTCCTTCCACGCACTAAAATCAGCGCCTCTACCGATTACTCTGTTACTGCCGAGTCCGATCTTTGCATCGTCACTGCTGGTGCTCGCCAGATCGCTGGTGAATCTAGGTTGAATCTGCTGCAGAGGAATGTTGCTCTGTTTCAGAAGATCGTGCCGCCGCTTGTTCAGTACTCTCCCGAGACGATTCTGCTGATCGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAGCTCTCTGGTTTTCCGTCGAATCGAGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTCATCGCTGATCATCTCGACGTTAACGCTCAGGATGTTCAGGCATACATAGTGGGAGAGCACGGCGACAGCTCGGTGGCGCTATGGTCAAGCATAAGCGTGGGCGGAGTGCCAATACTGAGCTTTCTACAGAATCAACAAATCACCTACGAGAAGGAAACATTAGAGAGCATTCACAAAGAGGTCATAGGCGGGGCTTATGAAGTGATAAACTTGAAGGGCTACACATCGTGGGCGATCGGCTACTCGGTGGCAAGCCTCGCCCGGTCGCTCCTCCGTGACCAGCGTAGGATCCACCCTGTCTCTGTCCTTGCTAAAGGGTTCTACGGCATCAATGGAGGTGAGCTGTTCCTCAGCCTGCCCGCGCAGCTTGGTAGGGGCGGAGTATTGGGGATCACCAATGTGCATCTAACCGACGAGGAGTCGGGACGGCTGAGGGACTCAGCCAACACCATCTTGCAGGTGCAGACCCAGTTGGGGATCTGA

Coding sequence (CDS)

ATGGAGAAGAGTTCATCAGCATCTTCCTTAGGTCCAGGCGGCCTTGACATTTCGCAGGCTTTCTTCAAGCCTGTAAGCGACGCCTCTCCGCCGTCTACCTCTAAGCGCAACACCAAAATCTCCGTCATCGGCGCTGGAAATGTCGGCATGGCCATTGCTCAGACCATCCTCACTCAAGATCTTGCCGATGAACTCGTCCTTGTCGACGCCAAGCCTGACAAACTCCGAGGCGAAATGCTCGATCTCCAACACGCCGCTGCTTTCCTTCCACGCACTAAAATCAGCGCCTCTACCGATTACTCTGTTACTGCCGAGTCCGATCTTTGCATCGTCACTGCTGGTGCTCGCCAGATCGCTGGTGAATCTAGGTTGAATCTGCTGCAGAGGAATGTTGCTCTGTTTCAGAAGATCGTGCCGCCGCTTGTTCAGTACTCTCCCGAGACGATTCTGCTGATCGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAGCTCTCTGGTTTTCCGTCGAATCGAGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTCATCGCTGATCATCTCGACGTTAACGCTCAGGATGTTCAGGCATACATAGTGGGAGAGCACGGCGACAGCTCGGTGGCGCTATGGTCAAGCATAAGCGTGGGCGGAGTGCCAATACTGAGCTTTCTACAGAATCAACAAATCACCTACGAGAAGGAAACATTAGAGAGCATTCACAAAGAGGTCATAGGCGGGGCTTATGAAGTGATAAACTTGAAGGGCTACACATCGTGGGCGATCGGCTACTCGGTGGCAAGCCTCGCCCGGTCGCTCCTCCGTGACCAGCGTAGGATCCACCCTGTCTCTGTCCTTGCTAAAGGGTTCTACGGCATCAATGGAGGTGAGCTGTTCCTCAGCCTGCCCGCGCAGCTTGGTAGGGGCGGAGTATTGGGGATCACCAATGTGCATCTAACCGACGAGGAGTCGGGACGGCTGAGGGACTCAGCCAACACCATCTTGCAGGTGCAGACCCAGTTGGGGATCTGA

Protein sequence

MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQDLADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAGESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYEKETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGINGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI

Homology

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BLAST of Carg23210 vs. NCBI nr
Match: XP_022922404.1 (L-lactate dehydrogenase A-like isoform X1 [Cucurbita moschata] >XP_022922405.1 L-lactate dehydrogenase A-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 673.3 bits (1736), Expect = 4.4e-190
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0


Query: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120
           LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG
Sbjct: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240

Query: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300
           KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI
Sbjct: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300

Query: 301 NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 351
           NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI
Sbjct: 301 NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 350

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BLAST of Carg23210 vs. NCBI nr
Match: XP_022969721.1 (L-lactate dehydrogenase A-like [Cucurbita maxima])

HSP 1 Score: 670.6 bits (1729), Expect = 2.8e-189
Identity = 348/350 (99.43%), Postives = 350/350 (100.00%), Query Frame = 0


Query: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MEKSSSASSLGPGGL+ISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MEKSSSASSLGPGGLNISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120
           LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG
Sbjct: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240

Query: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300
           KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI
Sbjct: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300

Query: 301 NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 351
           NGGE+FLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI
Sbjct: 301 NGGEMFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 350

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BLAST of Carg23210 vs. NCBI nr
Match: XP_023549806.1 (L-lactate dehydrogenase A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 670.6 bits (1729), Expect = 2.8e-189
Identity = 349/350 (99.71%), Postives = 349/350 (99.71%), Query Frame = 0


Query: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120
           LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG
Sbjct: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQYSP TILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQYSPGTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240

Query: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300
           KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI
Sbjct: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300

Query: 301 NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 351
           NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI
Sbjct: 301 NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 350

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BLAST of Carg23210 vs. NCBI nr
Match: XP_008437100.2 (PREDICTED: L-lactate dehydrogenase A [Cucumis melo])

HSP 1 Score: 638.3 bits (1645), Expect = 1.6e-179
Identity = 329/350 (94.00%), Postives = 339/350 (96.86%), Query Frame = 0


Query: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           M+KS S SSLGPGGLD+SQAFFKP+ DASPPSTS RNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSPSTSSLGPGGLDLSQAFFKPIRDASPPSTSNRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120
           L DELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS TA S+LCIVTAGARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSTTAGSNLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQ+SPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFL+NQQI YE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240

Query: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300
           KETLE IHKEVIGGAYEVINLKGYTSWAIGYSVASLARS+LRDQRRIHPVSVLAKGFYGI
Sbjct: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300

Query: 301 NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 351
           +GG+LFLSLPAQLGRGGVLGITNVHLT EES RLRDSANTILQVQT+LGI
Sbjct: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 350

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BLAST of Carg23210 vs. NCBI nr
Match: XP_004151663.2 (PREDICTED: LOW QUALITY PROTEIN: L-lactate dehydrogenase A-like [Cucumis sativus])

HSP 1 Score: 634.4 bits (1635), Expect = 2.3e-178
Identity = 326/350 (93.14%), Postives = 339/350 (96.86%), Query Frame = 0


Query: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           M+KSSS SSLGPGGLD+SQAFFKP+ DASPPST+ RNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120
           L DELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS+TA SDLCIVT GARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTGGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQ+SPETILLIVSNPVDVLTY+AWKLSGFPSNRVI SGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIXSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240
           NL+SSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFL+NQQI YE
Sbjct: 181 NLNSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 240

Query: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300
           KETLE IHKEVIGGAYEVINLKGYTSWAIGYSVASLARS+LRDQRRIHPVSVLAKGFYGI
Sbjct: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300

Query: 301 NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 351
           +GG+LFLSLPAQLGRGGVLGITNVHLT EES RLRDSANTILQVQT+LGI
Sbjct: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 350

[Close]

BLAST of Carg23210 vs. TAIR10
Match: AT4G17260.1 (Lactate/malate dehydrogenase family protein)

HSP 1 Score: 546.6 bits (1407), Expect = 1.1e-155
Identity = 271/353 (76.77%), Postives = 316/353 (89.52%), Query Frame = 0


Query: 1   MEKSSSASS---LGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTIL 60
           MEK++S SS   LGP GLD++ AFFKP+ ++ P   S R TK+SV+G GNVGMAIAQTIL
Sbjct: 1   MEKNASTSSLKDLGPSGLDLTSAFFKPIHNSDPSLPSNRRTKVSVVGVGNVGMAIAQTIL 60

Query: 61  TQDLADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQ 120
           TQDLADE+ LVDAKPDKLRGEMLDLQHAAAFLPRTKI+AS DY VTA SDLCIVTAGARQ
Sbjct: 61  TQDLADEIALVDAKPDKLRGEMLDLQHAAAFLPRTKITASVDYEVTAGSDLCIVTAGARQ 120

Query: 121 IAGESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIG 180
             GESRLNLLQRNVALF+ I+PPL + SP++IL+IVSNPVDVLTYVAWKLSGFP NRV+G
Sbjct: 121 NPGESRLNLLQRNVALFRHIIPPLAKASPDSILIIVSNPVDVLTYVAWKLSGFPVNRVLG 180

Query: 181 SGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQI 240
           SGTNLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGG+P+LSFL+  QI
Sbjct: 181 SGTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGIPVLSFLEKNQI 240

Query: 241 TYEKETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGF 300
            YEK+TLE IH+ V+G AYEVI LKGYTSWAIGYSVA+LAR++LRDQR+IHPV+VLA+GF
Sbjct: 241 AYEKQTLEDIHQAVVGSAYEVIGLKGYTSWAIGYSVANLARTILRDQRKIHPVTVLARGF 300

Query: 301 YGINGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 351
           YG++GG++FLSLPA LGR GV+ +TNVH+TDEE+ +L+ SA TIL++Q+QLG+
Sbjct: 301 YGVDGGDVFLSLPALLGRNGVVAVTNVHMTDEEAEKLQKSAKTILEMQSQLGL 353

[Close]

BLAST of Carg23210 vs. Swiss-Prot
Match: sp|P22988|LDHA_HORVU (L-lactate dehydrogenase A OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 5.4e-131
Identity = 246/348 (70.69%), Postives = 291/348 (83.62%), Query Frame = 0


Query: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASP--PSTS----KRNTKISVIGAGNVGMAIAQ 60
           M K+SS S LG      S  FF+PV+D  P  P++S    +R TKISVIGAGNVGMAIAQ
Sbjct: 1   MHKASSLSELGFDAGGASSGFFRPVADGCPATPTSSAVPHRRLTKISVIGAGNVGMAIAQ 60

Query: 61  TILTQDLADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAG 120
           TILTQ+LADE+ LVDA PDKLRGE LDLQHAAAFLPR +IS  TD +VT  SDL IVTAG
Sbjct: 61  TILTQNLADEIALVDALPDKLRGEALDLQHAAAFLPRVRIS-GTDAAVTKNSDLVIVTAG 120

Query: 121 ARQIAGESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNR 180
           ARQI GE+RLNLLQRNVAL++KIVPP+ ++SP+ +LL+VSNPVDVLTYVAWKLSGFP++R
Sbjct: 121 ARQIPGETRLNLLQRNVALYRKIVPPVAEHSPDALLLVVSNPVDVLTYVAWKLSGFPASR 180

Query: 181 VIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQN 240
           VIGSGTNLDSSRFRFLIA+HLDVNAQDVQAY+VGEHGDSSVA+WSSISVGG+P    L++
Sbjct: 181 VIGSGTNLDSSRFRFLIAEHLDVNAQDVQAYMVGEHGDSSVAIWSSISVGGMPAFKSLRD 240

Query: 241 QQITYEKETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLA 300
              ++++  LE I + V+GGAYEVI LKGYTSWAIGYSVASLA SLLRDQRR+HPVSVLA
Sbjct: 241 SHRSFDEAALEGIRRAVVGGAYEVIGLKGYTSWAIGYSVASLAASLLRDQRRVHPVSVLA 300

Query: 301 KGFYGINGG-ELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTI 342
            GF+GI+ G E+FLSLPA+LGRGG+LG+  + LT+ E+ +LR SA T+
Sbjct: 301 SGFHGISDGHEVFLSLPARLGRGGILGVAEMDLTEAEAAQLRRSAKTL 347

[Close]

BLAST of Carg23210 vs. Swiss-Prot
Match: sp|P22989|LDHB_HORVU (L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 4.3e-128
Identity = 235/342 (68.71%), Postives = 284/342 (83.04%), Query Frame = 0


Query: 16  DISQAFFKPVSDASP------PSTSKRNTKISVIGAGNVGMAIAQTILTQDLADELVLVD 75
           D S  FF+ V+D  P       +  +R TK+SVIGAGNVGMAIAQTILTQ+LADE+ LVD
Sbjct: 3   DASSGFFRAVADGCPITHTSCSAPHRRLTKVSVIGAGNVGMAIAQTILTQNLADEIALVD 62

Query: 76  AKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAGESRLNLLQR 135
           A PDKLRGE LDLQHAAAFLPR +I + TD +VT  SDL +VTAGARQI GE+RLNLLQR
Sbjct: 63  ALPDKLRGEALDLQHAAAFLPRVRIVSGTDAAVTKNSDLIVVTAGARQIPGETRLNLLQR 122

Query: 136 NVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRF 195
           NVAL++KIVPP+ ++SP+ +LL+VSNPVDVLTYVAWKLSGFP++RVIGSGTNLDSSRFRF
Sbjct: 123 NVALYRKIVPPVAEHSPDALLLVVSNPVDVLTYVAWKLSGFPASRVIGSGTNLDSSRFRF 182

Query: 196 LIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYEKETLESIHK 255
           L+A+HLDV+AQDVQAY+VGEHGDSSVA+WSSISVGG+P L  L++   ++++  LE I +
Sbjct: 183 LVAEHLDVSAQDVQAYMVGEHGDSSVAIWSSISVGGMPALKSLRDSHRSFDEAALEGIRR 242

Query: 256 EVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGINGG-ELFLS 315
            V+GGAYEVI LKGYTSWAIGYSVASLA SLLRDQRR+HPVSVLA GF+GI+ G E+FLS
Sbjct: 243 AVVGGAYEVIGLKGYTSWAIGYSVASLATSLLRDQRRVHPVSVLAAGFHGISDGHEVFLS 302

Query: 316 LPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 351
           LPA+LGR GVLG+  + LT+ E+ +LR SA T+ +    LG+
Sbjct: 303 LPARLGRAGVLGVAEMDLTEAEAAQLRRSAKTLWENCQLLGL 344

[Close]

BLAST of Carg23210 vs. Swiss-Prot
Match: sp|P29038|LDH_MAIZE (L-lactate dehydrogenase OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 1.2e-122
Identity = 237/354 (66.95%), Postives = 280/354 (79.10%), Query Frame = 0


Query: 1   MEKSSSASSLGPGGLDISQAFFKPVS-DASPPSTS---KRNTKISVIGAGNVGMAIAQTI 60
           M+K++S S LG    D S  FF+PVS D+S P++    +R TK+SVIGAGNVGMAIAQTI
Sbjct: 1   MKKATSLSELGFDAGDASSGFFRPVSGDSSTPTSQHHRRRLTKVSVIGAGNVGMAIAQTI 60

Query: 61  LTQDLADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGAR 120
           LT+DLADE+ LVDA PDKLRGEMLDLQHAAAFLPRT++ + TD SVT  SDL IVTAGAR
Sbjct: 61  LTRDLADEIALVDAVPDKLRGEMLDLQHAAAFLPRTRLVSGTDMSVTRGSDLVIVTAGAR 120

Query: 121 QIAGESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVI 180
           QI GE+RL+LLQRNVALF+KIVPPL + S + +LL+VSNPVDVLTYVAWKLSGFP++RVI
Sbjct: 121 QIQGETRLDLLQRNVALFRKIVPPLAEQSHDALLLVVSNPVDVLTYVAWKLSGFPASRVI 180

Query: 181 GSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQ 240
           GSGTNLDSSRFRFL+A+HLDVNAQDVQAY+VGEHGDSSVA+WSS+SV G+P+L  LQ   
Sbjct: 181 GSGTNLDSSRFRFLLAEHLDVNAQDVQAYMVGEHGDSSVAVWSSVSVAGMPVLKSLQESH 240

Query: 241 ITYEKETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKG 300
             +++E LE I + V+  AYEVI+LKGYTSWAIGYSVASLA SLLRDQRRIHPVSVLA+G
Sbjct: 241 RCFDEEALEGIRRAVVDSAYEVISLKGYTSWAIGYSVASLAASLLRDQRRIHPVSVLARG 300

Query: 301 FYGINGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 351
           F+GI  G    S               + LT+EE+ RLR SA TI +    LG+
Sbjct: 301 FHGIPDGTTSSSACPPRRXXXXXXRREMELTEEEAKRLRRSAKTIWENCQLLGL 354

[Close]

BLAST of Carg23210 vs. Swiss-Prot
Match: sp|P06151|LDHA_MOUSE (L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3)

HSP 1 Score: 349.0 bits (894), Expect = 6.2e-95
Identity = 176/310 (56.77%), Postives = 228/310 (73.55%), Query Frame = 0


Query: 39  KISVIGAGNVGMAIAQTILTQDLADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISAST 98
           KI+V+G G VGMA A +IL +DLADEL LVD   DKL+GEM+DLQH + FL   KI +S 
Sbjct: 22  KITVVGVGAVGMACAISILMKDLADELALVDVMEDKLKGEMMDLQHGSLFLKTPKIVSSK 81

Query: 99  DYSVTAESDLCIVTAGARQIAGESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVD 158
           DY VTA S L I+TAGARQ  GESRLNL+QRNV +F+ I+P +V+YSP   LLIVSNPVD
Sbjct: 82  DYCVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPHCKLLIVSNPVD 141

Query: 159 VLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALW 218
           +LTYVAWK+SGFP NRVIGSG NLDS+RFR+L+ + L V+A     +++GEHGDSSV +W
Sbjct: 142 ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHALSCHGWVLGEHGDSSVPVW 201

Query: 219 SSISVGGVPILSFLQNQQITYEKETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLAR 278
           S ++V GV + S         +KE  + +HK+V+  AYEVI LKGYTSWAIG SVA LA 
Sbjct: 202 SGVNVAGVSLKSLNPELGTDADKEQWKEVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAE 261

Query: 279 SLLRDQRRIHPVSVLAKGFYGINGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSA 338
           S++++ RR+HP+S + KG YGIN  ++FLS+P  LG+ G+  +  V LT EE  RL+ SA
Sbjct: 262 SIMKNLRRVHPISTMIKGLYGIN-EDVFLSVPCILGQNGISDVVKVTLTPEEEARLKKSA 321

Query: 339 NTILQVQTQL 349
           +T+  +Q +L
Sbjct: 322 DTLWGIQKEL 330

[Close]

BLAST of Carg23210 vs. Swiss-Prot
Match: sp|Q9XT87|LDHA_MONDO (L-lactate dehydrogenase A chain OS=Monodelphis domestica OX=13616 GN=LDHA PE=2 SV=3)

HSP 1 Score: 345.9 bits (886), Expect = 5.3e-94
Identity = 173/312 (55.45%), Postives = 229/312 (73.40%), Query Frame = 0


Query: 37  NTKISVIGAGNVGMAIAQTILTQDLADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISA 96
           + KI+V+G G VGMA A +IL +DLADEL LVD   DKL+GEM+DLQH + FL   KI +
Sbjct: 20  HNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVS 79

Query: 97  STDYSVTAESDLCIVTAGARQIAGESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNP 156
           S DY+VTA S L ++TAGARQ  GESRLNL+QRNV +F+ I+P +V+YSP   LL+VSNP
Sbjct: 80  SKDYAVTANSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLLVVSNP 139

Query: 157 VDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVA 216
           VD+LTYVAWKLSGFP NRVIGSG NLDS+RFR+L+ + L +++     +I+GEHGDSSV 
Sbjct: 140 VDILTYVAWKLSGFPKNRVIGSGCNLDSARFRYLMGEKLGIHSSSCHGWILGEHGDSSVP 199

Query: 217 LWSSISVGGVPILSFLQNQQITYEKETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASL 276
           +WS ++V GV + S         + E  + +HK+V+  AYEVI LKGYTSWAIG SVA L
Sbjct: 200 VWSGVNVAGVSLKSLHPALGTDSDSEQWKDVHKQVVESAYEVIKLKGYTSWAIGLSVADL 259

Query: 277 ARSLLRDQRRIHPVSVLAKGFYGINGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRD 336
           A S++++ RR+HP+S + KG YGIN  ++FLS+P  LG+ G+  +  V LT EE  RL+ 
Sbjct: 260 AESIMKNLRRVHPISTMIKGLYGIN-EDVFLSVPCILGQNGISDVVKVTLTTEEESRLKQ 319

Query: 337 SANTILQVQTQL 349
           SA+T+  +Q +L
Sbjct: 320 SADTLWGIQKEL 330

[Close]

BLAST of Carg23210 vs. TrEMBL
Match: tr|A0A1S3ATB9|A0A1S3ATB9_CUCME (L-lactate dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103482619 PE=3 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 1.0e-179
Identity = 329/350 (94.00%), Postives = 339/350 (96.86%), Query Frame = 0


Query: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           M+KS S SSLGPGGLD+SQAFFKP+ DASPPSTS RNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSPSTSSLGPGGLDLSQAFFKPIRDASPPSTSNRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120
           L DELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS TA S+LCIVTAGARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSTTAGSNLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQ+SPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFL+NQQI YE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240

Query: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300
           KETLE IHKEVIGGAYEVINLKGYTSWAIGYSVASLARS+LRDQRRIHPVSVLAKGFYGI
Sbjct: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300

Query: 301 NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 351
           +GG+LFLSLPAQLGRGGVLGITNVHLT EES RLRDSANTILQVQT+LGI
Sbjct: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 350

[Close]

BLAST of Carg23210 vs. TrEMBL
Match: tr|A0A0A0KKU9|A0A0A0KKU9_CUCSA (L-lactate dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_5G161920 PE=3 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 1.1e-173
Identity = 320/350 (91.43%), Postives = 331/350 (94.57%), Query Frame = 0


Query: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           M+KS S SSLGPGGLD+SQAFFKP+ DASP STS  NTKISVIG GNVGMAIAQTILTQD
Sbjct: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQD 122

Query: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120
           L DELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS+TA SDLCIVTAGARQIAG
Sbjct: 123 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAG 182

Query: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNV LFQKIVP LVQ+SPETILLIVSNPVDVLTYVAWKLSGF SNRVIGSGT
Sbjct: 183 ESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGT 242

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGGVPILSFL+NQQI YE
Sbjct: 243 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 302

Query: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300
           KETLE IHKEVIGGAYEVINLKGYTSWAIGYSVASLARS+LRDQRRIHPVSV+AKGFYGI
Sbjct: 303 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGI 362

Query: 301 NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 351
            GG+LFLSLPAQLGRGGVLGITNVHLT EES RLRDSANTIL VQ +LGI
Sbjct: 363 EGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 412

[Close]

BLAST of Carg23210 vs. TrEMBL
Match: tr|A0A067KUG8|A0A067KUG8_JATCU (L-lactate dehydrogenase OS=Jatropha curcas OX=180498 GN=JCGZ_03382 PE=3 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 1.1e-168
Identity = 303/350 (86.57%), Postives = 331/350 (94.57%), Query Frame = 0


Query: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           M+KS SAS+LGPGGLD++QAFFKP+ + +PPS +KR+TKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASTLGPGGLDLTQAFFKPIQNTAPPSPTKRHTKISVIGTGNVGMAIAQTILTQD 60

Query: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120
           LADEL LVDAKPDKLRGEMLDLQHAAAFLPRTKI ASTDYSVT  SDLCIVTAGARQI G
Sbjct: 61  LADELALVDAKPDKLRGEMLDLQHAAAFLPRTKIIASTDYSVTVGSDLCIVTAGARQIPG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALF+KI+PPLV YSPE+IL+IVSNPVDVLTY+AWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFEKIIPPLVNYSPESILMIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGGVPILSFL+ QQI YE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLEKQQIAYE 240

Query: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300
           KETLE+IHK VI  AYEVINLKGYTSWAIGYS A+LARSLLRDQR+IHPVSVLAKGFYGI
Sbjct: 241 KETLENIHKAVIDSAYEVINLKGYTSWAIGYSAANLARSLLRDQRKIHPVSVLAKGFYGI 300

Query: 301 NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 351
           +GGE+FLSLPAQLGRGGVLG+TNVHLT+EE+ RLR+SA T+L+VQ+QLGI
Sbjct: 301 DGGEVFLSLPAQLGRGGVLGVTNVHLTEEEARRLRESAKTLLEVQSQLGI 350

[Close]

BLAST of Carg23210 vs. TrEMBL
Match: tr|A0A2P5F5D0|A0A2P5F5D0_9ROSA (L-lactate dehydrogenase OS=Trema orientalis OX=63057 GN=TorRG33x02_112750 PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 5.3e-168
Identity = 301/350 (86.00%), Postives = 331/350 (94.57%), Query Frame = 0


Query: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           M+KS S SSLGPGGLD+S+AFFKP+  A+PPS +KR+TKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSESTSSLGPGGLDLSEAFFKPIHRAAPPSPTKRHTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120
           LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKI AS DY+VTA SDLCIVTAGARQI G
Sbjct: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKIHASVDYAVTAGSDLCIVTAGARQIPG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALF+ I+PPL +YSP+TILLIVSNPVDVLTYV+WKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFRNIIPPLARYSPDTILLIVSNPVDVLTYVSWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYI+GEHGDSSVALWSSISVGGVP+LSFL+ QQI YE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIIGEHGDSSVALWSSISVGGVPVLSFLERQQIPYE 240

Query: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300
           K+TLE+IHK+VIG AYEVI+LKGYTSWAIGYS A+LARS+LRDQR+IHPV+VLA G YGI
Sbjct: 241 KQTLENIHKQVIGSAYEVISLKGYTSWAIGYSAANLARSILRDQRKIHPVTVLATGLYGI 300

Query: 301 NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 351
           +GGE+FLSLPAQLGRGGVLG+TNVHL+DEE  RLRDSANTIL+VQ+QLGI
Sbjct: 301 DGGEVFLSLPAQLGRGGVLGVTNVHLSDEEGQRLRDSANTILEVQSQLGI 350

[Close]

BLAST of Carg23210 vs. TrEMBL
Match: tr|A0A1R3GNR2|A0A1R3GNR2_COCAP (L-lactate dehydrogenase OS=Corchorus capsularis OX=210143 GN=CCACVL1_24669 PE=3 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 4.5e-167
Identity = 300/350 (85.71%), Postives = 324/350 (92.57%), Query Frame = 0


Query: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           M KS S SSLGPGGLD+SQAFFKP+   +PPS +KRNTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MHKSPSGSSLGPGGLDLSQAFFKPIQSTAPPSATKRNTKISVIGVGNVGMAIAQTILTQD 60

Query: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120
           LADE+ LVDAK DKLRGEMLDLQHAAAFLPRTKI+AS DYSVTA SDLCIVTAGARQ  G
Sbjct: 61  LADEIALVDAKEDKLRGEMLDLQHAAAFLPRTKINASVDYSVTAGSDLCIVTAGARQNPG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALF KI+PPLVQYSP+TILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFSKIIPPLVQYSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLQNQQITYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYI+GEHGDSSVALWSSIS+GGVP+LSFL+NQQI YE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIIGEHGDSSVALWSSISIGGVPVLSFLKNQQIVYE 240

Query: 241 KETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSLLRDQRRIHPVSVLAKGFYGI 300
           KETLE+IHKEV+  AYEVI+LKGYTSWAIGYS A+LARS+LRDQR+IHPVSVLAKGFYGI
Sbjct: 241 KETLENIHKEVVNSAYEVISLKGYTSWAIGYSAANLARSILRDQRKIHPVSVLAKGFYGI 300

Query: 301 NGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDSANTILQVQTQLGI 351
           NGG++FLSLPA LGRGGVLG+TNVH T EE  RLR SA TIL+VQ+QLG+
Sbjct: 301 NGGDVFLSLPALLGRGGVLGVTNVHFTKEEEQRLRKSAETILEVQSQLGL 350

The following BLAST results are available for this feature:

BLAST of Carg23210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922404.1	4.4e-190	100.00	L-lactate dehydrogenase A-like isoform X1 [Cucurbita moschata] >XP_022922405.1 L...	[more]
XP_022969721.1	2.8e-189	99.43	L-lactate dehydrogenase A-like [Cucurbita maxima]	[more]
XP_023549806.1	2.8e-189	99.71	L-lactate dehydrogenase A-like [Cucurbita pepo subsp. pepo]	[more]
XP_008437100.2	1.6e-179	94.00	PREDICTED: L-lactate dehydrogenase A [Cucumis melo]	[more]
XP_004151663.2	2.3e-178	93.14	PREDICTED: LOW QUALITY PROTEIN: L-lactate dehydrogenase A-like [Cucumis sativus]	[more]

BLAST of Carg23210 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17260.1	1.1e-155	76.77	Lactate/malate dehydrogenase family protein	[more]

BLAST of Carg23210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P22988\|LDHA_HORVU	5.4e-131	70.69	L-lactate dehydrogenase A OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]
sp\|P22989\|LDHB_HORVU	4.3e-128	68.71	L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]
sp\|P29038\|LDH_MAIZE	1.2e-122	66.95	L-lactate dehydrogenase OS=Zea mays OX=4577 PE=2 SV=1	[more]
sp\|P06151\|LDHA_MOUSE	6.2e-95	56.77	L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3	[more]
sp\|Q9XT87\|LDHA_MONDO	5.3e-94	55.45	L-lactate dehydrogenase A chain OS=Monodelphis domestica OX=13616 GN=LDHA PE=2 S...	[more]

BLAST of Carg23210 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3ATB9\|A0A1S3ATB9_CUCME	1.0e-179	94.00	L-lactate dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103482619 PE=3 SV=1	[more]
tr\|A0A0A0KKU9\|A0A0A0KKU9_CUCSA	1.1e-173	91.43	L-lactate dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_5G161920 PE=3 SV=1	[more]
tr\|A0A067KUG8\|A0A067KUG8_JATCU	1.1e-168	86.57	L-lactate dehydrogenase OS=Jatropha curcas OX=180498 GN=JCGZ_03382 PE=3 SV=1	[more]
tr\|A0A2P5F5D0\|A0A2P5F5D0_9ROSA	5.3e-168	86.00	L-lactate dehydrogenase OS=Trema orientalis OX=63057 GN=TorRG33x02_112750 PE=3 S...	[more]
tr\|A0A1R3GNR2\|A0A1R3GNR2_COCAP	4.5e-167	85.71	L-lactate dehydrogenase OS=Corchorus capsularis OX=210143 GN=CCACVL1_24669 PE=3 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity
GO:0003824	catalytic activity
GO:0004459	L-lactate dehydrogenase activity
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process
GO:0019752	carboxylic acid metabolic process
GO:0055114	oxidation-reduction process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR018177	L-lactate_DH_AS
IPR022383	Lactate/malate_DH_C
IPR001236	Lactate/malate_DH_N
IPR015955	Lactate_DH/Glyco_Ohase_4_C
IPR011304	L-lactate_DH
IPR001557	L-lactate/malate_DH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006534	cysteine metabolic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006096	glycolytic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0019752	carboxylic acid metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004459	L-lactate dehydrogenase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23210-RA	Carg23210-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001557	L-lactate/malate dehydrogenase	PRINTS	PR00086	LLDHDRGNASE	coord: 39..63 score: 50.38 coord: 64..88 score: 51.92 coord: 205..218 score: 67.82 coord: 175..193 score: 68.42 coord: 151..171 score: 71.81
IPR001557	L-lactate/malate dehydrogenase	PIRSF	PIRSF000102	Lac_mal_DH	coord: 34..350 e-value: 3.6E-103 score: 342.9
IPR011304	L-lactate dehydrogenase	TIGRFAM	TIGR01771	TIGR01771	coord: 42..341 e-value: 7.7E-116 score: 384.6
IPR011304	L-lactate dehydrogenase	HAMAP	MF_00488	Lactate_dehydrog	coord: 37..349 score: 37.14
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	GENE3D	G3DSA:3.90.110.10		coord: 180..349 e-value: 8.8E-62 score: 209.6
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	SUPERFAMILY	SSF56327	LDH C-terminal domain-like	coord: 178..347
IPR001236	Lactate/malate dehydrogenase, N-terminal	PFAM	PF00056	Ldh_1_N	coord: 38..177 e-value: 3.1E-44 score: 150.4
None	No IPR available	GENE3D	G3DSA:3.40.50.720		coord: 23..179 e-value: 2.3E-64 score: 217.9
None	No IPR available	PANTHER	PTHR43128	FAMILY NOT NAMED	coord: 5..350
None	No IPR available	PANTHER	PTHR43128:SF12	SUBFAMILY NOT NAMED	coord: 5..350
None	No IPR available	CDD	cd05293	LDH_1	coord: 35..347 e-value: 1.01485E-174 score: 490.193
IPR022383	Lactate/malate dehydrogenase, C-terminal	PFAM	PF02866	Ldh_1_C	coord: 180..343 e-value: 1.4E-24 score: 86.8
IPR018177	L-lactate dehydrogenase, active site	PROSITE	PS00064	L_LDH	coord: 207..213
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 26..177

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23210	Cla011577	Watermelon (97103) v1	carwmB0541
Carg23210	Csa5G161910	Cucumber (Chinese Long) v2	carcuB0573
Carg23210	MELO3C005539	Melon (DHL92) v3.5.1	carmeB0547
Carg23210	ClCG01G003970	Watermelon (Charleston Gray)	carwcgB0528
Carg23210	CSPI05G06740	Wild cucumber (PI 183967)	carcpiB0579
Carg23210	Cucsa.301890	Cucumber (Gy14) v1	carcgyB0621
Carg23210	CmaCh15G011280	Cucurbita maxima (Rimu)	carcmaB0757
Carg23210	CmaCh02G015450	Cucurbita maxima (Rimu)	carcmaB0758
Carg23210	CmoCh15G011870	Cucurbita moschata (Rifu)	carcmoB0735
Carg23210	Lsi09G004170	Bottle gourd (USVL1VR-Ls)	carlsiB493
Carg23210	Cp4.1LG13g02350	Cucurbita pepo (Zucchini)	carcpeB0766
Carg23210	CsGy5G004080	Cucumber (Gy14) v2	carcgybB0549
Carg23210	MELO3C005539.2	Melon (DHL92) v3.6.1	carmedB0553
Carg23210	CsaV3_5G004150	Cucumber (Chinese Long) v3	carcucB0580
Carg23210	Cla97C01G004140	Watermelon (97103) v2	carwmbB0569
Carg23210	Bhi12G000410	Wax gourd	carwgoB0653

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23210	Carg02443	Silver-seed gourd	carcarB506

The following block(s) are covering this gene:

None