ClCG01G003970 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G003970
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	L-lactate dehydrogenase
Location	CG_Chr01 : 4322307 .. 4324391 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAACGCAACCCTCCATTTAAAATCCGCAAAGGCTCCACCGCCAATCACAATCTCCAAACCTTTTTCACAATGCAGAAAAGTACATCAACATCTTCCTTAGGTCCAGGCGGCCTCGACCTTTCTCAAGCCTTCTTCAAACCAATCCGCGACGCCTCTCCTCCATCCACCTCAAAACGCAACACCAAAATCTCCGTCATCGGCGCCGGAAACGTCGGCATGGCCATTGCTCAAACCATCCTCACTCAAGATCTGGTTGATGAACTCATCCTCGTCGACGCCAAGCCCGACAAACTCCGCGGCGAAATGCTCGATCTCCAACACGCTGCCGCCTTCCTTCCCCGCACCAAAATCAGCGCTTCCACAGATTACTCCGTTACCGCTGGATCCGATCTATGTATTGTCACCGCTGGTGCTCGCCAGATCGCCGGTGAATCTAGGTTGAATCTGTTGCAGAGGAATGTCGCTCTGTTTCAGAAGATCGTGCCGCCGCTGGTTCAGTTCTCTCCCGACACGATTCTTCTGATCGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAGCTCTCTGGTTTCCCGTCGAATCGAGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTCATCGCCGATCATCTCGACGTCAATGCTCAGGATGTTCAGGTCAGTTTTCCGATTGACATTTCTTCTACCTTCTTTAATGGATCATTGCTTATTTGTTAATTTTGGTGTTGTTTGTTGAAGAAATTTCCTTTTCGATTTAATTGTTTTTGGTTGATTGGTATCAAATGTGCTGATCATTTTTGGGAAAATTTGAGGAAAAGGAACAGGCCAAATAACTATTCCACACAAAATTGACAATTTATTAGATTCCAAATTGAAAGTTGCACTAGATCATGAATTTATTAGGAAAAATTAAAAAGTTTAGGGACTTTATCAACCTAAACTAAAACAGTTTGAACATTGAAGTTCTAATTGAACTAAAAAGTTGAGGTTAAATTTGGTAAAGGTTAGAATTTAGTTATAATTAAAATTTTGTACCTATCATTTATAAAATTCTAGTATTTATACATTTAGGACTATTCATGAGGTTTTATTAAACTACAAAAGACAAAATTCTAACTATAAAAAGTAGTAGGAGCTAACTTTTAGAATTATTGGGACTATATTCTAACCTTTTTCTAACTATAAGGGACCAAATTTGTAATTTGATACTTTTAAAATGTTCATTTTGAGTTTTATACTTTCAACTTTAATTCATTTTGGTCATTGAAAATGAGGTAAAAATGTAAATGGACCAAAATGGTCACTTATGAAAGTATAAGGACAAAAATAAACATTTTGAAAGTATATGGACGGAAATGAACCAAAAGTTAAAAGTATCGGGACAAAAATAATTATTTTGTAAATATAAGGATTAAAATGAACTAAAAAAACCAAAATAGACATTTTGAAAATTCAGTTACCAAAATGAAAAAGTAAATTCCAAGTTCACCCAAGTGTAACTCAATCCATCATTTAGGTGCTGAAATTATACATCAAACCATAGATGAATTTGTAGAAACTAGCATTGATATCTAAATCATGAAGCTAAAAAACAGAGAATTATATATATGTTTTGAAGGCCTACATAGTGGGAGAGCATGGCGACAGTTCTGTGGCGTTATGGTCAAGCATAAGCGTGGGCGGGGTGCCAATACTAAGCTTTCTAAAGAATCAACAAATCGCCTACGAGAAAGAAACATTAGAGAAAATTCACAAAGAGGTCATAGGCGGGGCTTACGAAGTCATAAGCCTGAAGGGCTACACATCATGGGCGATCGGGTACTCTGTGGCGAGCTTGGCTCGGTCGCTCATTCGGGACCAACGGAGGATCCACCCTGTTTCCGTCTTTGCAAAAGGGTTTTATGGCATTGACGGGGGCGACTTGTTCCTTAGTTTGCCCGCGCAGCTTGGGAGGGGTGGAGTATTGGGGATCACCAATGTGCATCTAACAGAAGAGGAGTCGAGACGATTGAGAGACTCGGCAAACACCATCTTGCAAGTGCAGACTGAGTTGGGAATCTAA

mRNA sequence

TTTAACGCAACCCTCCATTTAAAATCCGCAAAGGCTCCACCGCCAATCACAATCTCCAAACCTTTTTCACAATGCAGAAAAGTACATCAACATCTTCCTTAGGTCCAGGCGGCCTCGACCTTTCTCAAGCCTTCTTCAAACCAATCCGCGACGCCTCTCCTCCATCCACCTCAAAACGCAACACCAAAATCTCCGTCATCGGCGCCGGAAACGTCGGCATGGCCATTGCTCAAACCATCCTCACTCAAGATCTGGTTGATGAACTCATCCTCGTCGACGCCAAGCCCGACAAACTCCGCGGCGAAATGCTCGATCTCCAACACGCTGCCGCCTTCCTTCCCCGCACCAAAATCAGCGCTTCCACAGATTACTCCGTTACCGCTGGATCCGATCTATGTATTGTCACCGCTGGTGCTCGCCAGATCGCCGGTGAATCTAGGTTGAATCTGTTGCAGAGGAATGTCGCTCTGTTTCAGAAGATCGTGCCGCCGCTGGTTCAGTTCTCTCCCGACACGATTCTTCTGATCGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAGCTCTCTGGTTTCCCGTCGAATCGAGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTCATCGCCGATCATCTCGACGTCAATGCTCAGGATGTTCAGGCCTACATAGTGGGAGAGCATGGCGACAGTTCTGTGGCGTTATGGTCAAGCATAAGCGTGGGCGGGGTGCCAATACTAAGCTTTCTAAAGAATCAACAAATCGCCTACGAGAAAGAAACATTAGAGAAAATTCACAAAGAGGTCATAGGCGGGGCTTACGAAGTCATAAGCCTGAAGGGCTACACATCATGGGCGATCGGGTACTCTGTGGCGAGCTTGGCTCGGTCGCTCATTCGGGACCAACGGAGGATCCACCCTGTTTCCGTCTTTGCAAAAGGGTTTTATGGCATTGACGGGGGCGACTTGTTCCTTAGTTTGCCCGCGCAGCTTGGGAGGGGTGGAGTATTGGGGATCACCAATGTGCATCTAACAGAAGAGGAGTCGAGACGATTGAGAGACTCGGCAAACACCATCTTGCAAGTGCAGACTGAGTTGGGAATCTAA

Coding sequence (CDS)

ATGCAGAAAAGTACATCAACATCTTCCTTAGGTCCAGGCGGCCTCGACCTTTCTCAAGCCTTCTTCAAACCAATCCGCGACGCCTCTCCTCCATCCACCTCAAAACGCAACACCAAAATCTCCGTCATCGGCGCCGGAAACGTCGGCATGGCCATTGCTCAAACCATCCTCACTCAAGATCTGGTTGATGAACTCATCCTCGTCGACGCCAAGCCCGACAAACTCCGCGGCGAAATGCTCGATCTCCAACACGCTGCCGCCTTCCTTCCCCGCACCAAAATCAGCGCTTCCACAGATTACTCCGTTACCGCTGGATCCGATCTATGTATTGTCACCGCTGGTGCTCGCCAGATCGCCGGTGAATCTAGGTTGAATCTGTTGCAGAGGAATGTCGCTCTGTTTCAGAAGATCGTGCCGCCGCTGGTTCAGTTCTCTCCCGACACGATTCTTCTGATCGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAGCTCTCTGGTTTCCCGTCGAATCGAGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTCATCGCCGATCATCTCGACGTCAATGCTCAGGATGTTCAGGCCTACATAGTGGGAGAGCATGGCGACAGTTCTGTGGCGTTATGGTCAAGCATAAGCGTGGGCGGGGTGCCAATACTAAGCTTTCTAAAGAATCAACAAATCGCCTACGAGAAAGAAACATTAGAGAAAATTCACAAAGAGGTCATAGGCGGGGCTTACGAAGTCATAAGCCTGAAGGGCTACACATCATGGGCGATCGGGTACTCTGTGGCGAGCTTGGCTCGGTCGCTCATTCGGGACCAACGGAGGATCCACCCTGTTTCCGTCTTTGCAAAAGGGTTTTATGGCATTGACGGGGGCGACTTGTTCCTTAGTTTGCCCGCGCAGCTTGGGAGGGGTGGAGTATTGGGGATCACCAATGTGCATCTAACAGAAGAGGAGTCGAGACGATTGAGAGACTCGGCAAACACCATCTTGCAAGTGCAGACTGAGTTGGGAATCTAA

Protein sequence

MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQDLVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAGESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI

Homology

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BLAST of ClCG01G003970 vs. Swiss-Prot
Match: LDHA_HORVU (L-lactate dehydrogenase A OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 3.4e-130
Identity = 243/348 (69.83%), Postives = 285/348 (81.90%), Query Frame = 1


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASP--PSTS----KRNTKISVIGAGNVGMAIAQ 60
           M K++S S LG      S  FF+P+ D  P  P++S    +R TKISVIGAGNVGMAIAQ
Sbjct: 1   MHKASSLSELGFDAGGASSGFFRPVADGCPATPTSSAVPHRRLTKISVIGAGNVGMAIAQ 60

Query: 61  TILTQDLVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAG 120
           TILTQ+L DE+ LVDA PDKLRGE LDLQHAAAFLPR +IS  TD +VT  SDL IVTAG
Sbjct: 61  TILTQNLADEIALVDALPDKLRGEALDLQHAAAFLPRVRISG-TDAAVTKNSDLVIVTAG 120

Query: 121 ARQIAGESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNR 180
           ARQI GE+RLNLLQRNVAL++KIVPP+ + SPD +LL+VSNPVDVLTYVAWKLSGFP++R
Sbjct: 121 ARQIPGETRLNLLQRNVALYRKIVPPVAEHSPDALLLVVSNPVDVLTYVAWKLSGFPASR 180

Query: 181 VIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKN 240
           VIGSGTNLDSSRFRFLIA+HLDVNAQDVQAY+VGEHGDSSVA+WSSISVGG+P    L++
Sbjct: 181 VIGSGTNLDSSRFRFLIAEHLDVNAQDVQAYMVGEHGDSSVAIWSSISVGGMPAFKSLRD 240

Query: 241 QQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFA 300
              ++++  LE I + V+GGAYEVI LKGYTSWAIGYSVASLA SL+RDQRR+HPVSV A
Sbjct: 241 SHRSFDEAALEGIRRAVVGGAYEVIGLKGYTSWAIGYSVASLAASLLRDQRRVHPVSVLA 300

Query: 301 KGFYGI-DGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTI 342
            GF+GI DG ++FLSLPA+LGRGG+LG+  + LTE E+ +LR SA T+
Sbjct: 301 SGFHGISDGHEVFLSLPARLGRGGILGVAEMDLTEAEAAQLRRSAKTL 347

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BLAST of ClCG01G003970 vs. Swiss-Prot
Match: LDHB_HORVU (L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 3.6e-127
Identity = 233/342 (68.13%), Postives = 278/342 (81.29%), Query Frame = 1


Query: 16  DLSQAFFKPIRDASP------PSTSKRNTKISVIGAGNVGMAIAQTILTQDLVDELILVD 75
           D S  FF+ + D  P       +  +R TK+SVIGAGNVGMAIAQTILTQ+L DE+ LVD
Sbjct: 3   DASSGFFRAVADGCPITHTSCSAPHRRLTKVSVIGAGNVGMAIAQTILTQNLADEIALVD 62

Query: 76  AKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAGESRLNLLQR 135
           A PDKLRGE LDLQHAAAFLPR +I + TD +VT  SDL +VTAGARQI GE+RLNLLQR
Sbjct: 63  ALPDKLRGEALDLQHAAAFLPRVRIVSGTDAAVTKNSDLIVVTAGARQIPGETRLNLLQR 122

Query: 136 NVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRF 195
           NVAL++KIVPP+ + SPD +LL+VSNPVDVLTYVAWKLSGFP++RVIGSGTNLDSSRFRF
Sbjct: 123 NVALYRKIVPPVAEHSPDALLLVVSNPVDVLTYVAWKLSGFPASRVIGSGTNLDSSRFRF 182

Query: 196 LIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYEKETLEKIHK 255
           L+A+HLDV+AQDVQAY+VGEHGDSSVA+WSSISVGG+P L  L++   ++++  LE I +
Sbjct: 183 LVAEHLDVSAQDVQAYMVGEHGDSSVAIWSSISVGGMPALKSLRDSHRSFDEAALEGIRR 242

Query: 256 EVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGI-DGGDLFLS 315
            V+GGAYEVI LKGYTSWAIGYSVASLA SL+RDQRR+HPVSV A GF+GI DG ++FLS
Sbjct: 243 AVVGGAYEVIGLKGYTSWAIGYSVASLATSLLRDQRRVHPVSVLAAGFHGISDGHEVFLS 302

Query: 316 LPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI 351
           LPA+LGR GVLG+  + LTE E+ +LR SA T+ +    LG+
Sbjct: 303 LPARLGRAGVLGVAEMDLTEAEAAQLRRSAKTLWENCQLLGL 344

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BLAST of ClCG01G003970 vs. Swiss-Prot
Match: LDH_MAIZE (L-lactate dehydrogenase OS=Zea mays PE=2 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 6.3e-124
Identity = 239/355 (67.32%), Postives = 282/355 (79.44%), Query Frame = 1


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIR-DASPPSTS---KRNTKISVIGAGNVGMAIAQTI 60
           M+K+TS S LG    D S  FF+P+  D+S P++    +R TK+SVIGAGNVGMAIAQTI
Sbjct: 1   MKKATSLSELGFDAGDASSGFFRPVSGDSSTPTSQHHRRRLTKVSVIGAGNVGMAIAQTI 60

Query: 61  LTQDLVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGAR 120
           LT+DL DE+ LVDA PDKLRGEMLDLQHAAAFLPRT++ + TD SVT GSDL IVTAGAR
Sbjct: 61  LTRDLADEIALVDAVPDKLRGEMLDLQHAAAFLPRTRLVSGTDMSVTRGSDLVIVTAGAR 120

Query: 121 QIAGESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVI 180
           QI GE+RL+LLQRNVALF+KIVPPL + S D +LL+VSNPVDVLTYVAWKLSGFP++RVI
Sbjct: 121 QIQGETRLDLLQRNVALFRKIVPPLAEQSHDALLLVVSNPVDVLTYVAWKLSGFPASRVI 180

Query: 181 GSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQ 240
           GSGTNLDSSRFRFL+A+HLDVNAQDVQAY+VGEHGDSSVA+WSS+SV G+P+L  L+   
Sbjct: 181 GSGTNLDSSRFRFLLAEHLDVNAQDVQAYMVGEHGDSSVAVWSSVSVAGMPVLKSLQESH 240

Query: 241 IAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKG 300
             +++E LE I + V+  AYEVISLKGYTSWAIGYSVASLA SL+RDQRRIHPVSV A+G
Sbjct: 241 RCFDEEALEGIRRAVVDSAYEVISLKGYTSWAIGYSVASLAASLLRDQRRIHPVSVLARG 300

Query: 301 FYGI-DGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI 351
           F+GI DG     + P +  R    G   + LTEEE++RLR SA TI +    LG+
Sbjct: 301 FHGIPDGTTSSSACPPRRPRRRP-GRREMELTEEEAKRLRRSAKTIWENCQLLGL 354

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BLAST of ClCG01G003970 vs. Swiss-Prot
Match: LDHA_MOUSE (L-lactate dehydrogenase A chain OS=Mus musculus GN=Ldha PE=1 SV=3)

HSP 1 Score: 345.1 bits (884), Expect = 8.8e-94
Identity = 175/310 (56.45%), Postives = 225/310 (72.58%), Query Frame = 1


Query: 39  KISVIGAGNVGMAIAQTILTQDLVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISAST 98
           KI+V+G G VGMA A +IL +DL DEL LVD   DKL+GEM+DLQH + FL   KI +S 
Sbjct: 22  KITVVGVGAVGMACAISILMKDLADELALVDVMEDKLKGEMMDLQHGSLFLKTPKIVSSK 81

Query: 99  DYSVTAGSDLCIVTAGARQIAGESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVD 158
           DY VTA S L I+TAGARQ  GESRLNL+QRNV +F+ I+P +V++SP   LLIVSNPVD
Sbjct: 82  DYCVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPHCKLLIVSNPVD 141

Query: 159 VLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALW 218
           +LTYVAWK+SGFP NRVIGSG NLDS+RFR+L+ + L V+A     +++GEHGDSSV +W
Sbjct: 142 ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHALSCHGWVLGEHGDSSVPVW 201

Query: 219 SSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLAR 278
           S ++V GV + S         +KE  +++HK+V+  AYEVI LKGYTSWAIG SVA LA 
Sbjct: 202 SGVNVAGVSLKSLNPELGTDADKEQWKEVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAE 261

Query: 279 SLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSA 338
           S++++ RR+HP+S   KG YGI+  D+FLS+P  LG+ G+  +  V LT EE  RL+ SA
Sbjct: 262 SIMKNLRRVHPISTMIKGLYGIN-EDVFLSVPCILGQNGISDVVKVTLTPEEEARLKKSA 321

Query: 339 NTILQVQTEL 349
           +T+  +Q EL
Sbjct: 322 DTLWGIQKEL 330

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BLAST of ClCG01G003970 vs. Swiss-Prot
Match: LDHA_AMBME (L-lactate dehydrogenase A chain OS=Ambystoma mexicanum GN=LDHA PE=2 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 3.4e-93
Identity = 177/330 (53.64%), Postives = 231/330 (70.00%), Query Frame = 1


Query: 19  QAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQDLVDELILVDAKPDKLRGE 78
           Q     ++D   P+ +K    I+V+G G VGMA A +IL +DL DEL LVD   DKL+GE
Sbjct: 7   QLIINILKDEHAPAQNK----ITVVGVGAVGMACAMSILMKDLADELALVDVIEDKLKGE 66

Query: 79  MLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAGESRLNLLQRNVALFQKIV 138
           M+DLQH + FL   KI +  DYSVTA S L IVTAGARQ  GESRLNL+QRNV +F+ I+
Sbjct: 67  MMDLQHGSLFLRTPKIVSGKDYSVTANSKLVIVTAGARQQEGESRLNLVQRNVNIFKFII 126

Query: 139 PPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVN 198
           P +V++SPD  LL+VSNPVDVLTYVAWK+SGFP +RVIGSG NLDS+RFR+L+ + L V+
Sbjct: 127 PNVVKYSPDATLLVVSNPVDVLTYVAWKISGFPKHRVIGSGCNLDSARFRYLMGEKLGVH 186

Query: 199 AQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEV 258
           AQ    ++VGEHGDSSV +WS ++V GV + +         +KE  +++HK+V+  AYEV
Sbjct: 187 AQSCHGWVVGEHGDSSVPVWSGVNVAGVSLQTLNPELGTDADKENWKEVHKQVVESAYEV 246

Query: 259 ISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGV 318
           I LKGYTSWAIG SVA LA +++++ RR+HPVS   KG YG+   D+FLS+P  LG  G+
Sbjct: 247 IKLKGYTSWAIGLSVADLAETIMKNLRRVHPVSTKVKGLYGVH-EDVFLSVPCVLGNQGI 306

Query: 319 LGITNVHLTEEESRRLRDSANTILQVQTEL 349
             +  + L  EE  RLR S++T+  +Q EL
Sbjct: 307 TDVVKMTLKPEEEDRLRKSSDTLWGIQKEL 331

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BLAST of ClCG01G003970 vs. TrEMBL
Match: A0A0A0KKU9_CUCSA (L-lactate dehydrogenase OS=Cucumis sativus GN=Csa_5G161920 PE=3 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 1.1e-178
Identity = 327/350 (93.43%), Postives = 336/350 (96.00%), Query Frame = 1


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS STSSLGPGGLDLSQAFFKPIRDASP STS  NTKISVIG GNVGMAIAQTILTQD
Sbjct: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQD 122

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           LVDEL+LVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS+TA SDLCIVTAGARQIAG
Sbjct: 123 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAG 182

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNV LFQKIVP LVQFSP+TILLIVSNPVDVLTYVAWKLSGF SNRVIGSGT
Sbjct: 183 ESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGT 242

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGGVPILSFLKNQQI YE
Sbjct: 243 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 302

Query: 241 KETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGI 300
           KETLEKIHKEVIGGAYEVI+LKGYTSWAIGYSVASLARS++RDQRRIHPVSV AKGFYGI
Sbjct: 303 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGI 362

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI 351
           +GGDLFLSLPAQLGRGGVLGITNVHLT EES+RLRDSANTIL VQ ELGI
Sbjct: 363 EGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 412

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BLAST of ClCG01G003970 vs. TrEMBL
Match: A0A067KUG8_JATCU (L-lactate dehydrogenase OS=Jatropha curcas GN=JCGZ_03382 PE=3 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 9.0e-170
Identity = 302/350 (86.29%), Postives = 331/350 (94.57%), Query Frame = 1


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S S+LGPGGLDL+QAFFKPI++ +PPS +KR+TKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASTLGPGGLDLTQAFFKPIQNTAPPSPTKRHTKISVIGTGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           L DEL LVDAKPDKLRGEMLDLQHAAAFLPRTKI ASTDYSVT GSDLCIVTAGARQI G
Sbjct: 61  LADELALVDAKPDKLRGEMLDLQHAAAFLPRTKIIASTDYSVTVGSDLCIVTAGARQIPG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALF+KI+PPLV +SP++IL+IVSNPVDVLTY+AWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFEKIIPPLVNYSPESILMIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGGVPILSFL+ QQIAYE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLEKQQIAYE 240

Query: 241 KETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGI 300
           KETLE IHK VI  AYEVI+LKGYTSWAIGYS A+LARSL+RDQR+IHPVSV AKGFYGI
Sbjct: 241 KETLENIHKAVIDSAYEVINLKGYTSWAIGYSAANLARSLLRDQRKIHPVSVLAKGFYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI 351
           DGG++FLSLPAQLGRGGVLG+TNVHLTEEE+RRLR+SA T+L+VQ++LGI
Sbjct: 301 DGGEVFLSLPAQLGRGGVLGVTNVHLTEEEARRLRESAKTLLEVQSQLGI 350

[Close]

BLAST of ClCG01G003970 vs. TrEMBL
Match: A0A0D2UW00_GOSRA (L-lactate dehydrogenase OS=Gossypium raimondii GN=B456_009G297700 PE=3 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 1.4e-167
Identity = 298/350 (85.14%), Postives = 328/350 (93.71%), Query Frame = 1


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S SSLGPGGLDL+QAFFKPI++  PPS++KR+TKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASSLGPGGLDLAQAFFKPIQNCDPPSSTKRHTKISVIGVGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           L DEL LVDAK DKLRGEMLDLQHAAAFLPRTKI+AS DYSVTAGSDLCIVTAGARQ  G
Sbjct: 61  LADELALVDAKSDKLRGEMLDLQHAAAFLPRTKINASVDYSVTAGSDLCIVTAGARQNPG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALF  I+PPL ++SPD+ILLIVSNPVDVLTYV+WKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFSNIIPPLAKYSPDSILLIVSNPVDVLTYVSWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSIS+GGVP+LSFLKNQQIAYE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISIGGVPVLSFLKNQQIAYE 240

Query: 241 KETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGI 300
           K+TLE IHK V+  AYEVISLKGYTSWAIGYSVA+LARSL+RDQR+IHPVSV AKGFYGI
Sbjct: 241 KQTLENIHKAVVESAYEVISLKGYTSWAIGYSVANLARSLLRDQRKIHPVSVLAKGFYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI 351
           DGG++FLSLPAQLGRGGVLG+TN+HLT+EE +RLR SA TIL+VQ++LG+
Sbjct: 301 DGGEVFLSLPAQLGRGGVLGVTNIHLTDEEVQRLRKSAETILEVQSQLGL 350

[Close]

BLAST of ClCG01G003970 vs. TrEMBL
Match: A0A061GBE3_THECC (L-lactate dehydrogenase OS=Theobroma cacao GN=TCM_015995 PE=3 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 1.4e-167
Identity = 300/350 (85.71%), Postives = 327/350 (93.43%), Query Frame = 1


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S SSLGPGGLDL+QAFFKPI++ +PPS +KR+TKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSASASSLGPGGLDLTQAFFKPIQNTAPPSPTKRHTKISVIGVGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           L DEL LVDAK DKLRGEMLDLQHAAAFLPRTKI+AS DYSVTAGSDLCIVTAGARQ  G
Sbjct: 61  LADELSLVDAKADKLRGEMLDLQHAAAFLPRTKINASVDYSVTAGSDLCIVTAGARQNPG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLL+RNVALF  I+PPL +++PD+ILLIVSNPVD+LTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLRRNVALFSSIIPPLAKYAPDSILLIVSNPVDLLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVP+LSFLKNQQIAYE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLKNQQIAYE 240

Query: 241 KETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGI 300
           KETLE IHK VIG AYEVISLKGYTSWAIGYSVASLARSL+RDQR+IHPVSV AKGFYGI
Sbjct: 241 KETLENIHKAVIGSAYEVISLKGYTSWAIGYSVASLARSLLRDQRKIHPVSVLAKGFYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI 351
           + GD+FLSLPAQLGRGGVLG+TN+HLT+EE +RLR SA TIL+ Q++LG+
Sbjct: 301 NAGDVFLSLPAQLGRGGVLGVTNIHLTDEEVQRLRKSAKTILEYQSQLGL 350

[Close]

BLAST of ClCG01G003970 vs. TrEMBL
Match: A0A0B0P6A6_GOSAR (L-lactate dehydrogenase OS=Gossypium arboreum GN=F383_25947 PE=3 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 3.2e-167
Identity = 298/350 (85.14%), Postives = 327/350 (93.43%), Query Frame = 1


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S SSLGPGGLDL+QAFFKPI +  PPS++KR+TKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASSLGPGGLDLAQAFFKPILNTDPPSSTKRHTKISVIGVGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           L DEL LVDAK DKLRGEMLDLQHAAAFLPRTKI+AS DYSVTAGSDLCIVTAGARQ  G
Sbjct: 61  LADELALVDAKSDKLRGEMLDLQHAAAFLPRTKINASVDYSVTAGSDLCIVTAGARQNPG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALF  I+PPL ++SPD+ILLIVSNPVDVLTYV+WKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFSNIIPPLAKYSPDSILLIVSNPVDVLTYVSWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSIS+GGVP+LSFLKNQQIAYE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISIGGVPVLSFLKNQQIAYE 240

Query: 241 KETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGI 300
           K+TLE IHK V+  AYEVISLKGYTSWAIGYSVA+LARSL+RDQR+IHPVSV AKGFYGI
Sbjct: 241 KQTLENIHKAVVESAYEVISLKGYTSWAIGYSVANLARSLLRDQRKIHPVSVLAKGFYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI 351
           DGG++FLSLPAQLGRGGVLG+TN+HLT+EE +RLR SA TIL+VQ++LG+
Sbjct: 301 DGGEVFLSLPAQLGRGGVLGVTNIHLTDEEVQRLRKSAETILEVQSQLGL 350

[Close]

BLAST of ClCG01G003970 vs. TAIR10
Match: AT4G17260.1 (AT4G17260.1 Lactate/malate dehydrogenase family protein)

HSP 1 Score: 554.3 bits (1427), Expect = 5.4e-158
Identity = 273/353 (77.34%), Postives = 314/353 (88.95%), Query Frame = 1


Query: 1   MQKSTSTSSL---GPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTIL 60
           M+K+ STSSL   GP GLDL+ AFFKPI ++ P   S R TK+SV+G GNVGMAIAQTIL
Sbjct: 1   MEKNASTSSLKDLGPSGLDLTSAFFKPIHNSDPSLPSNRRTKVSVVGVGNVGMAIAQTIL 60

Query: 61  TQDLVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQ 120
           TQDL DE+ LVDAKPDKLRGEMLDLQHAAAFLPRTKI+AS DY VTAGSDLCIVTAGARQ
Sbjct: 61  TQDLADEIALVDAKPDKLRGEMLDLQHAAAFLPRTKITASVDYEVTAGSDLCIVTAGARQ 120

Query: 121 IAGESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIG 180
             GESRLNLLQRNVALF+ I+PPL + SPD+IL+IVSNPVDVLTYVAWKLSGFP NRV+G
Sbjct: 121 NPGESRLNLLQRNVALFRHIIPPLAKASPDSILIIVSNPVDVLTYVAWKLSGFPVNRVLG 180

Query: 181 SGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQI 240
           SGTNLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGG+P+LSFL+  QI
Sbjct: 181 SGTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGIPVLSFLEKNQI 240

Query: 241 AYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGF 300
           AYEK+TLE IH+ V+G AYEVI LKGYTSWAIGYSVA+LAR+++RDQR+IHPV+V A+GF
Sbjct: 241 AYEKQTLEDIHQAVVGSAYEVIGLKGYTSWAIGYSVANLARTILRDQRKIHPVTVLARGF 300

Query: 301 YGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI 351
           YG+DGGD+FLSLPA LGR GV+ +TNVH+T+EE+ +L+ SA TIL++Q++LG+
Sbjct: 301 YGVDGGDVFLSLPALLGRNGVVAVTNVHMTDEEAEKLQKSAKTILEMQSQLGL 353

[Close]

BLAST of ClCG01G003970 vs. NCBI nr
Match: gi|659073513|ref|XP_008437100.1| (PREDICTED: L-lactate dehydrogenase B [Cucumis melo])

HSP 1 Score: 659.4 bits (1700), Expect = 3.4e-186
Identity = 338/350 (96.57%), Postives = 345/350 (98.57%), Query Frame = 1


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS STSSLGPGGLDLSQAFFKPIRDASPPSTS RNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 83  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPPSTSNRNTKISVIGAGNVGMAIAQTILTQD 142

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           LVDEL+LVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS TAGS+LCIVTAGARQIAG
Sbjct: 143 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSTTAGSNLCIVTAGARQIAG 202

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSP+TILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 203 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 262

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240
           NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE
Sbjct: 263 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 322

Query: 241 KETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGI 300
           KETLEKIHKEVIGGAYEVI+LKGYTSWAIGYSVASLARS++RDQRRIHPVSV AKGFYGI
Sbjct: 323 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 382

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI 351
           DGGDLFLSLPAQLGRGGVLGITNVHLT EES+RLRDSANTILQVQTELGI
Sbjct: 383 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 432

[Close]

BLAST of ClCG01G003970 vs. NCBI nr
Match: gi|778700018|ref|XP_004151663.2| (PREDICTED: LOW QUALITY PROTEIN: L-lactate dehydrogenase A-like [Cucumis sativus])

HSP 1 Score: 651.7 bits (1680), Expect = 7.0e-184
Identity = 332/350 (94.86%), Postives = 343/350 (98.00%), Query Frame = 1


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS+S SSLGPGGLDLSQAFFKPIRDASPPST+ RNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           LVDEL+LVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS+TAGSDLCIVT GARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTGGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSP+TILLIVSNPVDVLTY+AWKLSGFPSNRVI SGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIXSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240
           NL+SSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQI YE
Sbjct: 181 NLNSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 240

Query: 241 KETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGI 300
           KETLEKIHKEVIGGAYEVI+LKGYTSWAIGYSVASLARS++RDQRRIHPVSV AKGFYGI
Sbjct: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI 351
           DGGDLFLSLPAQLGRGGVLGITNVHLT EES+RLRDSANTILQVQTELGI
Sbjct: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 350

[Close]

BLAST of ClCG01G003970 vs. NCBI nr
Match: gi|778700014|ref|XP_011654796.1| (PREDICTED: L-lactate dehydrogenase B-like [Cucumis sativus])

HSP 1 Score: 634.0 bits (1634), Expect = 1.5e-178
Identity = 327/350 (93.43%), Postives = 336/350 (96.00%), Query Frame = 1


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS STSSLGPGGLDLSQAFFKPIRDASP STS  NTKISVIG GNVGMAIAQTILTQD
Sbjct: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQD 122

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           LVDEL+LVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS+TA SDLCIVTAGARQIAG
Sbjct: 123 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAG 182

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNV LFQKIVP LVQFSP+TILLIVSNPVDVLTYVAWKLSGF SNRVIGSGT
Sbjct: 183 ESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGT 242

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGGVPILSFLKNQQI YE
Sbjct: 243 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 302

Query: 241 KETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGI 300
           KETLEKIHKEVIGGAYEVI+LKGYTSWAIGYSVASLARS++RDQRRIHPVSV AKGFYGI
Sbjct: 303 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGI 362

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI 351
           +GGDLFLSLPAQLGRGGVLGITNVHLT EES+RLRDSANTIL VQ ELGI
Sbjct: 363 EGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 412

[Close]

BLAST of ClCG01G003970 vs. NCBI nr
Match: gi|802581859|ref|XP_012069951.1| (PREDICTED: L-lactate dehydrogenase B [Jatropha curcas])

HSP 1 Score: 604.4 bits (1557), Expect = 1.3e-169
Identity = 302/350 (86.29%), Postives = 331/350 (94.57%), Query Frame = 1


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S S+LGPGGLDL+QAFFKPI++ +PPS +KR+TKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASTLGPGGLDLTQAFFKPIQNTAPPSPTKRHTKISVIGTGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           L DEL LVDAKPDKLRGEMLDLQHAAAFLPRTKI ASTDYSVT GSDLCIVTAGARQI G
Sbjct: 61  LADELALVDAKPDKLRGEMLDLQHAAAFLPRTKIIASTDYSVTVGSDLCIVTAGARQIPG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALF+KI+PPLV +SP++IL+IVSNPVDVLTY+AWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFEKIIPPLVNYSPESILMIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGGVPILSFL+ QQIAYE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLEKQQIAYE 240

Query: 241 KETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGI 300
           KETLE IHK VI  AYEVI+LKGYTSWAIGYS A+LARSL+RDQR+IHPVSV AKGFYGI
Sbjct: 241 KETLENIHKAVIDSAYEVINLKGYTSWAIGYSAANLARSLLRDQRKIHPVSVLAKGFYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI 351
           DGG++FLSLPAQLGRGGVLG+TNVHLTEEE+RRLR+SA T+L+VQ++LGI
Sbjct: 301 DGGEVFLSLPAQLGRGGVLGVTNVHLTEEEARRLRESAKTLLEVQSQLGI 350

[Close]

BLAST of ClCG01G003970 vs. NCBI nr
Match: gi|823228917|ref|XP_012447203.1| (PREDICTED: L-lactate dehydrogenase B-like [Gossypium raimondii])

HSP 1 Score: 597.0 bits (1538), Expect = 2.1e-167
Identity = 298/350 (85.14%), Postives = 328/350 (93.71%), Query Frame = 1


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S SSLGPGGLDL+QAFFKPI++  PPS++KR+TKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASSLGPGGLDLAQAFFKPIQNCDPPSSTKRHTKISVIGVGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           L DEL LVDAK DKLRGEMLDLQHAAAFLPRTKI+AS DYSVTAGSDLCIVTAGARQ  G
Sbjct: 61  LADELALVDAKSDKLRGEMLDLQHAAAFLPRTKINASVDYSVTAGSDLCIVTAGARQNPG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALF  I+PPL ++SPD+ILLIVSNPVDVLTYV+WKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFSNIIPPLAKYSPDSILLIVSNPVDVLTYVSWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSIS+GGVP+LSFLKNQQIAYE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISIGGVPVLSFLKNQQIAYE 240

Query: 241 KETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGI 300
           K+TLE IHK V+  AYEVISLKGYTSWAIGYSVA+LARSL+RDQR+IHPVSV AKGFYGI
Sbjct: 241 KQTLENIHKAVVESAYEVISLKGYTSWAIGYSVANLARSLLRDQRKIHPVSVLAKGFYGI 300

Query: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI 351
           DGG++FLSLPAQLGRGGVLG+TN+HLT+EE +RLR SA TIL+VQ++LG+
Sbjct: 301 DGGEVFLSLPAQLGRGGVLGVTNIHLTDEEVQRLRKSAETILEVQSQLGL 350

The following BLAST results are available for this feature:

BLAST of ClCG01G003970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LDHA_HORVU	3.4e-130	69.83	L-lactate dehydrogenase A OS=Hordeum vulgare PE=1 SV=1	[more]
LDHB_HORVU	3.6e-127	68.13	L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare PE=1 SV=1	[more]
LDH_MAIZE	6.3e-124	67.32	L-lactate dehydrogenase OS=Zea mays PE=2 SV=1	[more]
LDHA_MOUSE	8.8e-94	56.45	L-lactate dehydrogenase A chain OS=Mus musculus GN=Ldha PE=1 SV=3	[more]
LDHA_AMBME	3.4e-93	53.64	L-lactate dehydrogenase A chain OS=Ambystoma mexicanum GN=LDHA PE=2 SV=1	[more]

BLAST of ClCG01G003970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKU9_CUCSA	1.1e-178	93.43	L-lactate dehydrogenase OS=Cucumis sativus GN=Csa_5G161920 PE=3 SV=1	[more]
A0A067KUG8_JATCU	9.0e-170	86.29	L-lactate dehydrogenase OS=Jatropha curcas GN=JCGZ_03382 PE=3 SV=1	[more]
A0A0D2UW00_GOSRA	1.4e-167	85.14	L-lactate dehydrogenase OS=Gossypium raimondii GN=B456_009G297700 PE=3 SV=1	[more]
A0A061GBE3_THECC	1.4e-167	85.71	L-lactate dehydrogenase OS=Theobroma cacao GN=TCM_015995 PE=3 SV=1	[more]
A0A0B0P6A6_GOSAR	3.2e-167	85.14	L-lactate dehydrogenase OS=Gossypium arboreum GN=F383_25947 PE=3 SV=1	[more]

BLAST of ClCG01G003970 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17260.1	5.4e-158	77.34	Lactate/malate dehydrogenase family protein	[more]

BLAST of ClCG01G003970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073513\|ref\|XP_008437100.1\|	3.4e-186	96.57	PREDICTED: L-lactate dehydrogenase B [Cucumis melo]	[more]
gi\|778700018\|ref\|XP_004151663.2\|	7.0e-184	94.86	PREDICTED: LOW QUALITY PROTEIN: L-lactate dehydrogenase A-like [Cucumis sativus]	[more]
gi\|778700014\|ref\|XP_011654796.1\|	1.5e-178	93.43	PREDICTED: L-lactate dehydrogenase B-like [Cucumis sativus]	[more]
gi\|802581859\|ref\|XP_012069951.1\|	1.3e-169	86.29	PREDICTED: L-lactate dehydrogenase B [Jatropha curcas]	[more]
gi\|823228917\|ref\|XP_012447203.1\|	2.1e-167	85.14	PREDICTED: L-lactate dehydrogenase B-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001236	Lactate/malate_DH_N
IPR001557	L-lactate/malate_DH
IPR011304	L-lactate_DH
IPR015955	Lactate_DH/Glyco_Ohase_4_C
IPR016040	NAD(P)-bd_dom
IPR018177	L-lactate_DH_AS
IPR022383	Lactate/malate_DH_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0004459	L-lactate dehydrogenase activity
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process
GO:0019752	carboxylic acid metabolic process
GO:0005975	carbohydrate metabolic process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006534	cysteine metabolic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006096	glycolytic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0019752	carboxylic acid metabolic process
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004459	L-lactate dehydrogenase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G003970.1	ClCG01G003970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001236	Lactate/malate dehydrogenase, N-terminal	PFAM	PF00056	Ldh_1_N	coord: 38..177 score: 2.1
IPR001557	L-lactate/malate dehydrogenase	PRINTS	PR00086	LLDHDRGNASE	coord: 64..88 score: 4.0E-54coord: 205..218 score: 4.0E-54coord: 175..193 score: 4.0E-54coord: 39..63 score: 4.0E-54coord: 151..171 score: 4.0
IPR001557	L-lactate/malate dehydrogenase	PIR	PIRSF000102	Lac_mal_DH	coord: 34..350 score: 3.1E
IPR001557	L-lactate/malate dehydrogenase	PANTHER	PTHR11540	MALATE AND LACTATE DEHYDROGENASE	coord: 10..348 score: 5.2E
IPR011304	L-lactate dehydrogenase	HAMAP	MF_00488	Lactate_dehydrog	coord: 37..349 score: 37
IPR011304	L-lactate dehydrogenase	TIGRFAMs	TIGR01771	TIGR01771	coord: 42..341 score: 3.0E
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	GENE3D	G3DSA:3.90.110.10		coord: 179..348 score: 1.1
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	unknown	SSF56327	LDH C-terminal domain-like	coord: 178..346 score: 9.66
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 29..178 score: 2.4
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 24..177 score: 6.81
IPR018177	L-lactate dehydrogenase, active site	PROSITE	PS00064	L_LDH	coord: 207..213 scor
IPR022383	Lactate/malate dehydrogenase, C-terminal	PFAM	PF02866	Ldh_1_C	coord: 180..343 score: 2.0
None	No IPR available	PANTHER	PTHR11540:SF3	L-LACTATE DEHYDROGENASE	coord: 10..348 score: 5.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G003970	Csa5G161910	Cucumber (Chinese Long) v2	cuwcgB364
ClCG01G003970	MELO3C005539	Melon (DHL92) v3.5.1	mewcgB018
ClCG01G003970	Cla011577	Watermelon (97103) v1	wcgwmB142
ClCG01G003970	Cla97C01G004140	Watermelon (97103) v2	wcgwmbB089
ClCG01G003970	Bhi12G000410	Wax gourd	wcgwgoB193
ClCG01G003970	CSPI05G06740	Wild cucumber (PI 183967)	cpiwcgB379
ClCG01G003970	Cucsa.301890	Cucumber (Gy14) v1	cgywcgB520
ClCG01G003970	CmaCh15G011280	Cucurbita maxima (Rimu)	cmawcgB259
ClCG01G003970	CmaCh02G015450	Cucurbita maxima (Rimu)	cmawcgB524
ClCG01G003970	CmoCh02G015870	Cucurbita moschata (Rifu)	cmowcgB522
ClCG01G003970	CmoCh15G011870	Cucurbita moschata (Rifu)	cmowcgB247
ClCG01G003970	Lsi09G004170	Bottle gourd (USVL1VR-Ls)	lsiwcgB008
ClCG01G003970	Cp4.1LG13g02350	Cucurbita pepo (Zucchini)	cpewcgB165
ClCG01G003970	Cp4.1LG05g02440	Cucurbita pepo (Zucchini)	cpewcgB637
ClCG01G003970	CsGy5G004080	Cucumber (Gy14) v2	cgybwcgB332
ClCG01G003970	MELO3C005539.2	Melon (DHL92) v3.6.1	medwcgB016
ClCG01G003970	Carg02443	Silver-seed gourd	carwcgB0897
ClCG01G003970	Carg23210	Silver-seed gourd	carwcgB0528
ClCG01G003970	CsaV3_5G004150	Cucumber (Chinese Long) v3	cucwcgB385

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G003970	Watermelon (Charleston Gray)	wcgwcgB041
ClCG01G003970	Cucumber (Gy14) v1	cgywcgB557
ClCG01G003970	Cucurbita maxima (Rimu)	cmawcgB518
ClCG01G003970	Cucurbita maxima (Rimu)	cmawcgB733
ClCG01G003970	Cucurbita moschata (Rifu)	cmowcgB516
ClCG01G003970	Cucurbita moschata (Rifu)	cmowcgB737
ClCG01G003970	Cucumber (Chinese Long) v2	cuwcgB207
ClCG01G003970	Melon (DHL92) v3.5.1	mewcgB418
ClCG01G003970	Watermelon (97103) v1	wcgwmB119
ClCG01G003970	Cucurbita pepo (Zucchini)	cpewcgB780
ClCG01G003970	Silver-seed gourd	carwcgB0899
ClCG01G003970	Cucumber (Chinese Long) v3	cucwcgB211
ClCG01G003970	Watermelon (97103) v2	wcgwmbB094