BLAST of Carg06904 vs. NCBI nr
Match:
XP_022944564.1 (pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Cucurbita moschata] >XP_022944565.1 pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1405.6 bits (3637), Expect = 0.0e+00
Identity = 731/845 (86.51%), Postives = 732/845 (86.63%), Query Frame = 0
Query: 1 MEISATLSIHGRSPTPKQAIIVSKDWNLIIKHQTKLKNDHAILSTYTQMESL-------- 60
MEISATLSIHGRSPTPKQAI VSKDWNLIIKHQTKLKNDHAILSTYTQMESL
Sbjct: 1 MEISATLSIHGRSPTPKQAINVSKDWNLIIKHQTKLKNDHAILSTYTQMESLGIAPDSAT 60
Query: 61 ------------------------------------------------------------ 120
Sbjct: 61 MPLVLKACGRLNAIEKGVRIHSCIRDSDLIRDVRVGTALVDFYSKCGLVGEASKVFDEMP 120
Query: 121 ------------------------------------------VPLLLACAEMLELRLGHE 180
VPLLLACAEMLELRLGHE
Sbjct: 121 ERDLVSWNALISGYVGCSCYKEAVLLFIEMQKAGLTPNSRTVVPLLLACAEMLELRLGHE 180
Query: 181 IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNIGD 240
IHGYCLRNGLFDMDAHVGTALIGFYMRFDA VSHRVFSSMEVRNVVSWNAMITGYLNIGD
Sbjct: 181 IHGYCLRNGLFDMDAHVGTALIGFYMRFDATVSHRVFSSMEVRNVVSWNAMITGYLNIGD 240
Query: 241 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNA 300
YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNA
Sbjct: 241 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNA 300
Query: 301 LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED 360
LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED
Sbjct: 301 LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED 360
Query: 361 KRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF 420
KRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF
Sbjct: 361 KRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF 420
Query: 421 DKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV 480
DKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV
Sbjct: 421 DKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV 480
Query: 481 FGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISSYI 540
FGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSAT LFIRCPQRDL+SWNSLISSYI
Sbjct: 481 FGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATNLFIRCPQRDLVSWNSLISSYI 540
Query: 541 KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA 600
KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA
Sbjct: 541 KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA 600
Query: 601 SLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD 660
SLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD
Sbjct: 601 SLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD 660
Query: 661 GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE 720
GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE
Sbjct: 661 GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE 720
Query: 721 AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA 736
AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA
Sbjct: 721 AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA 780
BLAST of Carg06904 vs. NCBI nr
Match:
XP_023512048.1 (pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512049.1 pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512050.1 pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1386.3 bits (3587), Expect = 0.0e+00
Identity = 721/845 (85.33%), Postives = 728/845 (86.15%), Query Frame = 0
Query: 1 MEISATLSIHGRSPTPKQAIIVSKDWNLIIKHQTKLKNDHAILSTYTQMESL-------- 60
MEISATLSIHGRSPTPKQAI VSKDWNLIIKHQTKLKNDHAILSTYTQMESL
Sbjct: 1 MEISATLSIHGRSPTPKQAINVSKDWNLIIKHQTKLKNDHAILSTYTQMESLGIAPDSAT 60
Query: 61 ------------------------------------------------------------ 120
Sbjct: 61 MPLVLKACGRLNAIEKGVRIHSCIRDSDLIRDVRVGTALVDFYSKCGLVGEASKVFDEMP 120
Query: 121 ------------------------------------------VPLLLACAEMLELRLGHE 180
VPLLLACAEMLELRLGHE
Sbjct: 121 ERDLVSWNALISGYVGCSCYKEAVLLFMEMQKAGLTPNSRTVVPLLLACAEMLELRLGHE 180
Query: 181 IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNIGD 240
IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFS MEVRNVVSWNAMITGYLNIGD
Sbjct: 181 IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSLMEVRNVVSWNAMITGYLNIGD 240
Query: 241 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNA 300
YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNF+ DLFVLNA
Sbjct: 241 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFVDDLFVLNA 300
Query: 301 LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED 360
LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED
Sbjct: 301 LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED 360
Query: 361 KRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF 420
KRTV IMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF
Sbjct: 361 KRTVAIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF 420
Query: 421 DKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV 480
DKMRGLDVIS NTMILALA+SKFRAKAF+LFMTMCESEIKFNSYTMISLLALCKDGSDLV
Sbjct: 421 DKMRGLDVISWNTMILALAQSKFRAKAFQLFMTMCESEIKFNSYTMISLLALCKDGSDLV 480
Query: 481 FGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISSYI 540
FGRSIHGFAIKNGLEINTSLNTSLTEMYINC DEGSAT LFIRCPQRDLISWNSLISSYI
Sbjct: 481 FGRSIHGFAIKNGLEINTSLNTSLTEMYINCSDEGSATNLFIRCPQRDLISWNSLISSYI 540
Query: 541 KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA 600
KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA
Sbjct: 541 KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA 600
Query: 601 SLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD 660
SLANAFITMYARCGKMQYAEKIF+TL+ARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD
Sbjct: 601 SLANAFITMYARCGKMQYAEKIFNTLQARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD 660
Query: 661 GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE 720
GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE
Sbjct: 661 GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE 720
Query: 721 AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA 736
AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSN+YAA
Sbjct: 721 AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNVYAA 780
BLAST of Carg06904 vs. NCBI nr
Match:
XP_022986695.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita maxima] >XP_022986696.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 1375.9 bits (3560), Expect = 0.0e+00
Identity = 717/845 (84.85%), Postives = 725/845 (85.80%), Query Frame = 0
Query: 1 MEISATLSIHGRSPTPKQAIIVSKDWNLIIKHQTKLKNDHAILSTYTQMESL-------- 60
MEISATLSIHGRSPTPKQAI VSKDWNLIIKHQTKLKNDHAILSTYTQMESL
Sbjct: 1 MEISATLSIHGRSPTPKQAINVSKDWNLIIKHQTKLKNDHAILSTYTQMESLGIAPDSAT 60
Query: 61 ------------------------------------------------------------ 120
Sbjct: 61 MPLVLKACGRLNAIEKGARIHSCIRDSDLIRDVRVGTALVDFYSKCGLVREASKVFDEMP 120
Query: 121 ------------------------------------------VPLLLACAEMLELRLGHE 180
VPLLLACAEMLELRLGHE
Sbjct: 121 ERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLTPNSRTVVPLLLACAEMLELRLGHE 180
Query: 181 IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNIGD 240
IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFS ME+RNVVSWNAMITGYLNIGD
Sbjct: 181 IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSLMEMRNVVSWNAMITGYLNIGD 240
Query: 241 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNA 300
Y KALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFI DLFVLNA
Sbjct: 241 YPKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIDDLFVLNA 300
Query: 301 LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED 360
LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED
Sbjct: 301 LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED 360
Query: 361 KRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF 420
KRTV IMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF
Sbjct: 361 KRTVAIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF 420
Query: 421 DKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV 480
DK RGLDVIS NTMILALA+SKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV
Sbjct: 421 DKTRGLDVISWNTMILALAQSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV 480
Query: 481 FGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISSYI 540
FGRSIHGFAIKNGLEINTSLNTSLTEMYIN DEGSAT LFIRCP+RDLISWNSLISSYI
Sbjct: 481 FGRSIHGFAIKNGLEINTSLNTSLTEMYINSSDEGSATNLFIRCPERDLISWNSLISSYI 540
Query: 541 KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA 600
KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA
Sbjct: 541 KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA 600
Query: 601 SLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD 660
SLANAFITMYARCGKMQYAEKIF+TL+ARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD
Sbjct: 601 SLANAFITMYARCGKMQYAEKIFNTLQARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD 660
Query: 661 GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE 720
GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCI+DLLGRGGHF+E
Sbjct: 661 GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIIDLLGRGGHFSE 720
Query: 721 AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA 736
AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA
Sbjct: 721 AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA 780
BLAST of Carg06904 vs. NCBI nr
Match:
XP_008449715.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucumis melo])
HSP 1 Score: 1219.9 bits (3155), Expect = 0.0e+00
Identity = 631/847 (74.50%), Postives = 676/847 (79.81%), Query Frame = 0
Query: 1 MEISATLSIHGRSPTPKQA--IIVSKDWNLIIKHQTKLKNDHAILSTYTQMESL------ 60
MEI+ LS HG S TPKQ I VSKDWN IIKH TKLKNDHAILSTYTQMESL
Sbjct: 1 MEIAVNLSYHGLSSTPKQTHLINVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDS 60
Query: 61 ------------------------------------------------------------ 120
Sbjct: 61 ATMPLVLKACGRLNAIDKGVRIHSCIRGSDLINDVRVGTALVDFYCKCGLVAEASKVFVE 120
Query: 121 --------------------------------------------VPLLLACAEMLELRLG 180
V LLLAC EMLELRLG
Sbjct: 121 MPERDLVSWNALISGXXXXXXXXXXXXXXXXXKKAGLTPNSRTVVALLLACGEMLELRLG 180
Query: 181 HEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNI 240
EIHGYCLRNGLFDMDA+VGTAL+GFY+RFDA +SHRVFS M VRN+VSWNA+ITG+LN+
Sbjct: 181 QEIHGYCLRNGLFDMDAYVGTALVGFYLRFDAVLSHRVFSLMVVRNIVSWNAIITGFLNV 240
Query: 241 GDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVL 300
GDYTKALKLFSSML EGIKFDAVTML+VIQACAE L+LGMQLHQLAIKFN I D+FVL
Sbjct: 241 GDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDVFVL 300
Query: 301 NALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLK 360
NALLNMYSDNG LESSC LFNAVPTSDAALWNSMIS YI FGFHAEAIAL+IKMRLE +K
Sbjct: 301 NALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGFHAEAIALFIKMRLERIK 360
Query: 361 EDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQK 420
ED RT+ IMLSLC DLNDGS+WGRGLHAHAMKSG+ELD FLGNALLSMYV+HNQI+AAQ
Sbjct: 361 EDVRTIVIMLSLCNDLNDGSLWGRGLHAHAMKSGIELDAFLGNALLSMYVKHNQINAAQN 420
Query: 421 LFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSD 480
+F+K RGLDVIS NTMI ALA+S FRAKAFELF MCESEIKFNSYT+ISLLALCKDG+D
Sbjct: 421 VFEKTRGLDVISWNTMISALAQSMFRAKAFELFFMMCESEIKFNSYTIISLLALCKDGND 480
Query: 481 LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISS 540
LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINC DE +A +F RCPQRDLISWNSLI S
Sbjct: 481 LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAIDMFTRCPQRDLISWNSLILS 540
Query: 541 YIKNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFEL 600
YIKNDNAGKALLLFNHMISELEPNSVTII+ILTSCTQLAHLPLGQCLHAY TRR ES E+
Sbjct: 541 YIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHLPLGQCLHAYATRREESLEM 600
Query: 601 DASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQML 660
DASLANAFITMYARCGKMQYAE+IF TL+ RNIVSWNAMITGYGMHGRG DATLAFAQML
Sbjct: 601 DASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMITGYGMHGRGRDATLAFAQML 660
Query: 661 DDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHF 720
DDGFKPNN+SF SVLSACSHSGLT+TGL LF SMVRDFG+APQL HYGC+VDLLGRGGHF
Sbjct: 661 DDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLAPQLTHYGCMVDLLGRGGHF 720
Query: 721 AEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIY 736
+EAIA I++MP+EPDASIWRALLSS Q+KSNKKL+ETIF KLVELEPSNPGNF+LLSNIY
Sbjct: 721 SEAIAFINTMPIEPDASIWRALLSSWQIKSNKKLLETIFGKLVELEPSNPGNFILLSNIY 780
BLAST of Carg06904 vs. NCBI nr
Match:
XP_004142223.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g01580 [Cucumis sativus])
HSP 1 Score: 1213.4 bits (3138), Expect = 0.0e+00
Identity = 626/847 (73.91%), Postives = 675/847 (79.69%), Query Frame = 0
Query: 1 MEISATLSIHGRSPTPKQA--IIVSKDWNLIIKHQTKLKNDHAILSTYTQMESL------ 60
MEI+ LS HG S TP+Q + VSKDWN IIKH TKLKNDHAILSTYTQMESL
Sbjct: 1 MEIAVNLSFHGLSSTPEQTHLVNVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDS 60
Query: 61 ------------------------------------------------------------ 120
Sbjct: 61 ATMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVE 120
Query: 121 --------------------------------------------VPLLLACAEMLELRLG 180
V LLLAC EMLELRLG
Sbjct: 121 MPERDLVSWNALISGXXXXXXXXXXXXXXXXXKKAGLTPNSRTVVALLLACGEMLELRLG 180
Query: 181 HEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNI 240
EIHGYCLRNGLFDMDA+VGTAL+GFYMRFDA +SHRVFS M VRN+VSWNA+ITG+LN+
Sbjct: 181 QEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHRVFSLMLVRNIVSWNAIITGFLNV 240
Query: 241 GDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVL 300
GD KALKL+SSML EGIKFDAVTML+VIQACAE L+LGMQLHQLAIKFN I DLF+L
Sbjct: 241 GDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFIL 300
Query: 301 NALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLK 360
NALLNMYSDNG LESS ALFNAVPTSDAALWNSMIS+YI FGFHAEAIAL+IKMRLE +K
Sbjct: 301 NALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIK 360
Query: 361 EDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQK 420
ED RT+ IMLSLC DLNDGSIWGRGLHAHAMKSG+ELD +LGNALLSMYV+HNQI AAQ
Sbjct: 361 EDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQY 420
Query: 421 LFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSD 480
+F+KMRGLDVIS NTMI A A+S FRAKAFELF+ MCESEIKFNSYT++SLLA CKDGSD
Sbjct: 421 VFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSD 480
Query: 481 LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISS 540
LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINC DE +AT +F RCPQRDL+SWNSLISS
Sbjct: 481 LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISS 540
Query: 541 YIKNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFEL 600
YIKNDNAGKALLLFNHMISELEPNSVTII+ILTSCTQLAHLPLGQCLHAYTTRR S E+
Sbjct: 541 YIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEM 600
Query: 601 DASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQML 660
DASLANAFITMYARCGK+QYAEKIF TL+ R+IVSWNAMITGYGMHGRG DATLAFAQML
Sbjct: 601 DASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQML 660
Query: 661 DDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHF 720
DDGFKPNN+SF SVLSACSHSGLT TGLQLF SMVRDFGIAPQL HYGC+VDLLGRGGHF
Sbjct: 661 DDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHF 720
Query: 721 AEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIY 736
+EAIA I+SMP+EPDASIWRALLSSCQ+KSN KL+ETIF KLVELEPSNPGNF+LLSNIY
Sbjct: 721 SEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIY 780
BLAST of Carg06904 vs. TAIR10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 414.8 bits (1065), Expect = 1.1e-115
Identity = 239/743 (32.17%), Postives = 410/743 (55.18%), Query Frame = 0
Query: 12 RSPTPKQAIIVSKDWNLIIKHQTKLKNDHAILSTYTQMESLVPLLLACAEMLELRLGHEI 71
RSP ++ SK + +++ D +L + LL A A++ ++ LG +I
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 72 HGYCLRNGLFDMDAHVGTALIGFYMRF-DAAVSHRVFSSMEVRNVVSWNAMITGYLNIGD 131
H + + G V L+ Y + D ++VF + RN VSWN++I+ +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 132 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAE---SESLQLGMQLHQLAIKFNFIGDLFV 191
+ AL+ F ML E ++ + T++ V+ AC+ E L +G Q+H ++ + F+
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FI 239
Query: 192 LNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGL 251
+N L+ MY G+L SS L + D WN+++S+ EA+ +M LEG+
Sbjct: 240 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 299
Query: 252 KEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSG-MELDVFLGNALLSMYVEHNQIDAA 311
+ D+ T+ +L C L + G+ LHA+A+K+G ++ + F+G+AL+ MY Q+ +
Sbjct: 300 EPDEFTISSVLPACSHL-EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 359
Query: 312 QKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESE-IKFNSYTMISLLALCKD 371
+++FD M + N MI ++++ +A LF+ M ES + NS TM ++ C
Sbjct: 360 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 419
Query: 372 GSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSL 431
+IHGF +K GL+ + + +L +MY A +F + RDL++WN++
Sbjct: 420 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 479
Query: 432 ISSYIKNDNAGKALLLFNHMIS------------ELEPNSVTIISILTSCTQLAHLPLGQ 491
I+ Y+ +++ ALLL + M + L+PNS+T+++IL SC L+ L G+
Sbjct: 480 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 539
Query: 492 CLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGM 551
+HAY + + D ++ +A + MYA+CG +Q + K+F + +N+++WN +I YGM
Sbjct: 540 EIHAYAIK--NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 599
Query: 552 HGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLA 611
HG G +A M+ G KPN ++F+SV +ACSHSG+ GL++F M D+G+ P
Sbjct: 600 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 659
Query: 612 HYGCIVDLLGRGGHFAEAIALISSMPVE-PDASIWRALLSSCQVKSNKKLVETIFRKLVE 671
HY C+VDLLGR G EA L++ MP + A W +LL + ++ +N ++ E + L++
Sbjct: 660 HYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ 719
Query: 672 LEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFTATDV 731
LEP+ ++VLL+NIY++AGLW + +++R+ ++++G+ K PG SWI G +VH F A D
Sbjct: 720 LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDS 779
Query: 732 SHPQSEEIYENLNSLTSLIQDMG 736
SHPQSE++ L +L ++ G
Sbjct: 780 SHPQSEKLSGYLETLWERMRKEG 798
BLAST of Carg06904 vs. TAIR10
Match:
AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 401.4 bits (1030), Expect = 1.2e-111
Identity = 227/708 (32.06%), Postives = 373/708 (52.68%), Query Frame = 0
Query: 30 IKHQTKLKNDHAILSTYTQMESLVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGT 89
++ KL N L + V L+ C G +++ L + + + +G
Sbjct: 75 LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL-SSMSSLGVELGN 134
Query: 90 ALIGFYMRFDAAV-SHRVFSSMEVRNVVSWNAMITGYLNIGDYTKALKLFSSML-TEGIK 149
A + ++RF V + VF M RN+ SWN ++ GY G + +A+ L+ ML G+K
Sbjct: 135 AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVK 194
Query: 150 FDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNALLNMYSDNGRLESSCAL 209
D T V++ C L G ++H +++ + D+ V+NAL+ MY G ++S+ L
Sbjct: 195 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 254
Query: 210 FNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDG 269
F+ +P D WN+MIS Y G E + L+ MR + D T+ ++S CE L D
Sbjct: 255 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDR 314
Query: 270 SIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILA 329
+ GR +HA+ + +G +D+ + N+L MY+ A+KLF +M D++S TMI
Sbjct: 315 RL-GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 374
Query: 330 LARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEIN 389
+ KA + + M + +K + T+ ++L+ C DL G +H AIK L
Sbjct: 375 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 434
Query: 390 TSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHMIS 449
+ +L MY C+ A +F P++++ISW S+I+ N+ +AL+ M
Sbjct: 435 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 494
Query: 450 ELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQ 509
L+PN++T+ + L +C ++ L G+ +HA+ R G LD L NA + MY RCG+M
Sbjct: 495 TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVG--LDDFLPNALLDMYVRCGRMN 554
Query: 510 YAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACS 569
A F++ K +++ SWN ++TGY G+G F +M+ +P+ I+F+S+L CS
Sbjct: 555 TAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 614
Query: 570 HSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIW 629
S + + GL FS M D+G+ P L HY C+VDLLGR G EA I MPV PD ++W
Sbjct: 615 KSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 674
Query: 630 RALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDK 689
ALL++C++ L E + + EL+ + G ++LL N+YA G W EV+++R+ +++
Sbjct: 675 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKEN 734
Query: 690 GLVKPPGTSWIVIGSQVHYFTATDVSHPQSEEIYENLNSLTSLIQDMG 736
GL G SW+ + +VH F + D HPQ++EI L + ++G
Sbjct: 735 GLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVG 776
BLAST of Carg06904 vs. TAIR10
Match:
AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 401.4 bits (1030), Expect = 1.2e-111
Identity = 240/687 (34.93%), Postives = 382/687 (55.60%), Query Frame = 0
Query: 57 LACAEMLELRL--GHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRN 116
L A+ L RL +I C+ L ++ ++G + A++ F ++ R+
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLG----------NVALARHTFDHIQNRD 126
Query: 117 VVSWNAMITGYLNIGDYTKALKLFS-SMLTEGIKFDAVTMLLVIQACAESESLQLGMQLH 176
V +WN MI+GY G+ ++ ++ FS ML+ G+ D T V++AC ++ G ++H
Sbjct: 127 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIH 186
Query: 177 QLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHA 236
LA+KF F+ D++V +L+++YS + ++ LF+ +P D WN+MIS Y G
Sbjct: 187 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 246
Query: 237 EAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRG--LHAHAMKSGMELDVFLGN 296
EA+ L +R D TV +LS C + D + RG +H++++K G+E ++F+ N
Sbjct: 247 EALTLSNGLR----AMDSVTVVSLLSACTEAGD---FNRGVTIHSYSIKHGLESELFVSN 306
Query: 297 ALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKF 356
L+ +Y E ++ QK+FD+M D+IS N++I A ++ +A LF M S I+
Sbjct: 307 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 366
Query: 357 NSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEI-NTSLNTSLTEMYINCRDEGSATTL 416
+ T+ISL ++ D+ RS+ GF ++ G + + ++ ++ MY SA +
Sbjct: 367 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 426
Query: 417 FIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHM--ISELEPNSVTIISILTSCTQLAH 476
F P D+ISWN++IS Y +N A +A+ ++N M E+ N T +S+L +C+Q
Sbjct: 427 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 486
Query: 477 LPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMI 536
L G LH + G LD + + MY +CG+++ A +F + N V WN +I
Sbjct: 487 LRQGMKLHGRLLKNG--LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLI 546
Query: 537 TGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGI 596
+G HG G A + F +MLD+G KP++I+FV++LSACSHSGL G F M D+GI
Sbjct: 547 ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGI 606
Query: 597 APQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFR 656
P L HYGC+VD+ GR G A+ I SM ++PDASIW ALLS+C+V N L +
Sbjct: 607 TPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASE 666
Query: 657 KLVELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFT 716
L E+EP + G VLLSN+YA+AG W V +IR KGL K PG S + + ++V F
Sbjct: 667 HLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFY 726
Query: 717 ATDVSHPQSEEIYENLNSLTSLIQDMG 736
+ +HP EE+Y L +L + ++ +G
Sbjct: 727 TGNQTHPMYEEMYRELTALQAKLKMIG 731
BLAST of Carg06904 vs. TAIR10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 394.0 bits (1011), Expect = 2.0e-109
Identity = 218/683 (31.92%), Postives = 367/683 (53.73%), Query Frame = 0
Query: 55 LLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVS-HRVFSSMEVR 114
+L AC ++ L +G ++HG L+ G F D +V AL+ Y +S +FS+M R
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLG-FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 353
Query: 115 NVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLH 174
+ V++N +I G G KA++LF M +G++ D+ T+ ++ AC+ +L G QLH
Sbjct: 354 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 413
Query: 175 QLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHA 234
K F + + ALLN+Y+ +E++ F + LWN M+ AY
Sbjct: 414 AYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLR 473
Query: 235 EAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNAL 294
+ ++ +M++E + ++ T +L C L D + G +H+ +K+ +L+ ++ + L
Sbjct: 474 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL-GEQIHSQIIKTNFQLNAYVCSVL 533
Query: 295 LSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNS 354
+ MY + ++D A + + G DV+S TMI + F KA F M + I+ +
Sbjct: 534 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 593
Query: 355 YTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIR 414
+ + ++ C L G+ IH A +G + +L +Y C + F +
Sbjct: 594 VGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 653
Query: 415 CPQRDLISWNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIISILTSCTQLAHLPLG 474
D I+WN+L+S + ++ N +AL +F M E ++ N+ T S + + ++ A++ G
Sbjct: 654 TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 713
Query: 475 QCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYG 534
+ +HA T+ G ++ + + NA I+MYA+CG + AEK F + +N VSWNA+I Y
Sbjct: 714 KQVHAVITKTG--YDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 773
Query: 535 MHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQL 594
HG G +A +F QM+ +PN+++ V VLSACSH GL G+ F SM ++G++P+
Sbjct: 774 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 833
Query: 595 AHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVE 654
HY C+VD+L R G + A I MP++PDA +WR LLS+C V N ++ E L+E
Sbjct: 834 EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 893
Query: 655 LEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFTATDV 714
LEP + +VLLSN+YA + W R+ +++KG+ K PG SWI + + +H F D
Sbjct: 894 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 953
Query: 715 SHPQSEEIYENLNSLTSLIQDMG 736
+HP ++EI+E LT ++G
Sbjct: 954 NHPLADEIHEYFQDLTKRASEIG 972
BLAST of Carg06904 vs. TAIR10
Match:
AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 391.7 bits (1005), Expect = 9.7e-109
Identity = 220/688 (31.98%), Postives = 383/688 (55.67%), Query Frame = 0
Query: 49 MESLVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMR-FDAAVSHRVF 108
+ S LL ACA++ ++R G E+H ++ G + + AL+ Y + D + + R+F
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLG-YHSTGFIVNALVSMYAKNDDLSAARRLF 241
Query: 109 SSMEVR-NVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESL 168
+ + + V WN++++ Y G + L+LF M G ++ T++ + AC
Sbjct: 242 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 301
Query: 169 QLGMQLHQLAIKFN-FIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISA 228
+LG ++H +K + +L+V NAL+ MY+ G++ + + + +D WNS+I
Sbjct: 302 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 361
Query: 229 YIAFGFHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMEL 288
Y+ + EA+ + M G K D+ ++ +++ L++ + G LHA+ +K G +
Sbjct: 362 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN-LLAGMELHAYVIKHGWDS 421
Query: 289 DVFLGNALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMC 348
++ +GN L+ MY + N + F +M D+IS T+I A++ +A ELF +
Sbjct: 422 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 481
Query: 349 ESEIKFNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEG 408
+ ++ + + S+L ++ + IH ++ GL ++T + L ++Y CR+ G
Sbjct: 482 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMG 541
Query: 409 SATTLFIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHMI-SELEPNSVTIISILTSCT 468
AT +F +D++SW S+ISS N N +A+ LF M+ + L +SV ++ IL++
Sbjct: 542 YATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 601
Query: 469 QLAHLPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSW 528
L+ L G+ +H Y R+G F L+ S+A A + MYA CG +Q A+ +F ++ + ++ +
Sbjct: 602 SLSALNKGREIHCYLLRKG--FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQY 661
Query: 529 NAMITGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVR 588
+MI YGMHG G A F +M + P++ISF+++L ACSH+GL G M
Sbjct: 662 TSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEH 721
Query: 589 DFGIAPQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVE 648
++ + P HY C+VD+LGR EA + M EP A +W ALL++C+ S K++ E
Sbjct: 722 EYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGE 781
Query: 649 TIFRKLVELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQV 708
++L+ELEP NPGN VL+SN++A G W++V ++R ++ G+ K PG SWI + +V
Sbjct: 782 IAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKV 841
Query: 709 HYFTATDVSHPQSEEIYENLNSLTSLIQ 733
H FTA D SHP+S+EIYE L+ +T ++
Sbjct: 842 HKFTARDKSHPESKEIYEKLSEVTRKLE 864
BLAST of Carg06904 vs. Swiss-Prot
Match:
sp|Q7Y211|PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 414.8 bits (1065), Expect = 1.9e-114
Identity = 239/743 (32.17%), Postives = 410/743 (55.18%), Query Frame = 0
Query: 12 RSPTPKQAIIVSKDWNLIIKHQTKLKNDHAILSTYTQMESLVPLLLACAEMLELRLGHEI 71
RSP ++ SK + +++ D +L + LL A A++ ++ LG +I
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 72 HGYCLRNGLFDMDAHVGTALIGFYMRF-DAAVSHRVFSSMEVRNVVSWNAMITGYLNIGD 131
H + + G V L+ Y + D ++VF + RN VSWN++I+ +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 132 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAE---SESLQLGMQLHQLAIKFNFIGDLFV 191
+ AL+ F ML E ++ + T++ V+ AC+ E L +G Q+H ++ + F+
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FI 239
Query: 192 LNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGL 251
+N L+ MY G+L SS L + D WN+++S+ EA+ +M LEG+
Sbjct: 240 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 299
Query: 252 KEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSG-MELDVFLGNALLSMYVEHNQIDAA 311
+ D+ T+ +L C L + G+ LHA+A+K+G ++ + F+G+AL+ MY Q+ +
Sbjct: 300 EPDEFTISSVLPACSHL-EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 359
Query: 312 QKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESE-IKFNSYTMISLLALCKD 371
+++FD M + N MI ++++ +A LF+ M ES + NS TM ++ C
Sbjct: 360 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 419
Query: 372 GSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSL 431
+IHGF +K GL+ + + +L +MY A +F + RDL++WN++
Sbjct: 420 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 479
Query: 432 ISSYIKNDNAGKALLLFNHMIS------------ELEPNSVTIISILTSCTQLAHLPLGQ 491
I+ Y+ +++ ALLL + M + L+PNS+T+++IL SC L+ L G+
Sbjct: 480 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 539
Query: 492 CLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGM 551
+HAY + + D ++ +A + MYA+CG +Q + K+F + +N+++WN +I YGM
Sbjct: 540 EIHAYAIK--NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 599
Query: 552 HGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLA 611
HG G +A M+ G KPN ++F+SV +ACSHSG+ GL++F M D+G+ P
Sbjct: 600 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 659
Query: 612 HYGCIVDLLGRGGHFAEAIALISSMPVE-PDASIWRALLSSCQVKSNKKLVETIFRKLVE 671
HY C+VDLLGR G EA L++ MP + A W +LL + ++ +N ++ E + L++
Sbjct: 660 HYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ 719
Query: 672 LEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFTATDV 731
LEP+ ++VLL+NIY++AGLW + +++R+ ++++G+ K PG SWI G +VH F A D
Sbjct: 720 LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDS 779
Query: 732 SHPQSEEIYENLNSLTSLIQDMG 736
SHPQSE++ L +L ++ G
Sbjct: 780 SHPQSEKLSGYLETLWERMRKEG 798
BLAST of Carg06904 vs. Swiss-Prot
Match:
sp|O81767|PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)
HSP 1 Score: 401.4 bits (1030), Expect = 2.2e-110
Identity = 240/687 (34.93%), Postives = 382/687 (55.60%), Query Frame = 0
Query: 57 LACAEMLELRL--GHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRN 116
L A+ L RL +I C+ L ++ ++G + A++ F ++ R+
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLG----------NVALARHTFDHIQNRD 126
Query: 117 VVSWNAMITGYLNIGDYTKALKLFS-SMLTEGIKFDAVTMLLVIQACAESESLQLGMQLH 176
V +WN MI+GY G+ ++ ++ FS ML+ G+ D T V++AC ++ G ++H
Sbjct: 127 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIH 186
Query: 177 QLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHA 236
LA+KF F+ D++V +L+++YS + ++ LF+ +P D WN+MIS Y G
Sbjct: 187 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 246
Query: 237 EAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRG--LHAHAMKSGMELDVFLGN 296
EA+ L +R D TV +LS C + D + RG +H++++K G+E ++F+ N
Sbjct: 247 EALTLSNGLR----AMDSVTVVSLLSACTEAGD---FNRGVTIHSYSIKHGLESELFVSN 306
Query: 297 ALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKF 356
L+ +Y E ++ QK+FD+M D+IS N++I A ++ +A LF M S I+
Sbjct: 307 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 366
Query: 357 NSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEI-NTSLNTSLTEMYINCRDEGSATTL 416
+ T+ISL ++ D+ RS+ GF ++ G + + ++ ++ MY SA +
Sbjct: 367 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 426
Query: 417 FIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHM--ISELEPNSVTIISILTSCTQLAH 476
F P D+ISWN++IS Y +N A +A+ ++N M E+ N T +S+L +C+Q
Sbjct: 427 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 486
Query: 477 LPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMI 536
L G LH + G LD + + MY +CG+++ A +F + N V WN +I
Sbjct: 487 LRQGMKLHGRLLKNG--LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLI 546
Query: 537 TGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGI 596
+G HG G A + F +MLD+G KP++I+FV++LSACSHSGL G F M D+GI
Sbjct: 547 ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGI 606
Query: 597 APQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFR 656
P L HYGC+VD+ GR G A+ I SM ++PDASIW ALLS+C+V N L +
Sbjct: 607 TPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASE 666
Query: 657 KLVELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFT 716
L E+EP + G VLLSN+YA+AG W V +IR KGL K PG S + + ++V F
Sbjct: 667 HLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFY 726
Query: 717 ATDVSHPQSEEIYENLNSLTSLIQDMG 736
+ +HP EE+Y L +L + ++ +G
Sbjct: 727 TGNQTHPMYEEMYRELTALQAKLKMIG 731
BLAST of Carg06904 vs. Swiss-Prot
Match:
sp|Q9M9E2|PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)
HSP 1 Score: 401.4 bits (1030), Expect = 2.2e-110
Identity = 227/708 (32.06%), Postives = 373/708 (52.68%), Query Frame = 0
Query: 30 IKHQTKLKNDHAILSTYTQMESLVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGT 89
++ KL N L + V L+ C G +++ L + + + +G
Sbjct: 75 LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL-SSMSSLGVELGN 134
Query: 90 ALIGFYMRFDAAV-SHRVFSSMEVRNVVSWNAMITGYLNIGDYTKALKLFSSML-TEGIK 149
A + ++RF V + VF M RN+ SWN ++ GY G + +A+ L+ ML G+K
Sbjct: 135 AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVK 194
Query: 150 FDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNALLNMYSDNGRLESSCAL 209
D T V++ C L G ++H +++ + D+ V+NAL+ MY G ++S+ L
Sbjct: 195 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 254
Query: 210 FNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDG 269
F+ +P D WN+MIS Y G E + L+ MR + D T+ ++S CE L D
Sbjct: 255 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDR 314
Query: 270 SIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILA 329
+ GR +HA+ + +G +D+ + N+L MY+ A+KLF +M D++S TMI
Sbjct: 315 RL-GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 374
Query: 330 LARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEIN 389
+ KA + + M + +K + T+ ++L+ C DL G +H AIK L
Sbjct: 375 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 434
Query: 390 TSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHMIS 449
+ +L MY C+ A +F P++++ISW S+I+ N+ +AL+ M
Sbjct: 435 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 494
Query: 450 ELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQ 509
L+PN++T+ + L +C ++ L G+ +HA+ R G LD L NA + MY RCG+M
Sbjct: 495 TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVG--LDDFLPNALLDMYVRCGRMN 554
Query: 510 YAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACS 569
A F++ K +++ SWN ++TGY G+G F +M+ +P+ I+F+S+L CS
Sbjct: 555 TAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 614
Query: 570 HSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIW 629
S + + GL FS M D+G+ P L HY C+VDLLGR G EA I MPV PD ++W
Sbjct: 615 KSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 674
Query: 630 RALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDK 689
ALL++C++ L E + + EL+ + G ++LL N+YA G W EV+++R+ +++
Sbjct: 675 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKEN 734
Query: 690 GLVKPPGTSWIVIGSQVHYFTATDVSHPQSEEIYENLNSLTSLIQDMG 736
GL G SW+ + +VH F + D HPQ++EI L + ++G
Sbjct: 735 GLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVG 776
BLAST of Carg06904 vs. Swiss-Prot
Match:
sp|Q9SVP7|PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 394.0 bits (1011), Expect = 3.5e-108
Identity = 218/683 (31.92%), Postives = 367/683 (53.73%), Query Frame = 0
Query: 55 LLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVS-HRVFSSMEVR 114
+L AC ++ L +G ++HG L+ G F D +V AL+ Y +S +FS+M R
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLG-FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 353
Query: 115 NVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLH 174
+ V++N +I G G KA++LF M +G++ D+ T+ ++ AC+ +L G QLH
Sbjct: 354 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 413
Query: 175 QLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHA 234
K F + + ALLN+Y+ +E++ F + LWN M+ AY
Sbjct: 414 AYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLR 473
Query: 235 EAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNAL 294
+ ++ +M++E + ++ T +L C L D + G +H+ +K+ +L+ ++ + L
Sbjct: 474 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL-GEQIHSQIIKTNFQLNAYVCSVL 533
Query: 295 LSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNS 354
+ MY + ++D A + + G DV+S TMI + F KA F M + I+ +
Sbjct: 534 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 593
Query: 355 YTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIR 414
+ + ++ C L G+ IH A +G + +L +Y C + F +
Sbjct: 594 VGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 653
Query: 415 CPQRDLISWNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIISILTSCTQLAHLPLG 474
D I+WN+L+S + ++ N +AL +F M E ++ N+ T S + + ++ A++ G
Sbjct: 654 TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 713
Query: 475 QCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYG 534
+ +HA T+ G ++ + + NA I+MYA+CG + AEK F + +N VSWNA+I Y
Sbjct: 714 KQVHAVITKTG--YDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 773
Query: 535 MHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQL 594
HG G +A +F QM+ +PN+++ V VLSACSH GL G+ F SM ++G++P+
Sbjct: 774 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 833
Query: 595 AHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVE 654
HY C+VD+L R G + A I MP++PDA +WR LLS+C V N ++ E L+E
Sbjct: 834 EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 893
Query: 655 LEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFTATDV 714
LEP + +VLLSN+YA + W R+ +++KG+ K PG SWI + + +H F D
Sbjct: 894 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 953
Query: 715 SHPQSEEIYENLNSLTSLIQDMG 736
+HP ++EI+E LT ++G
Sbjct: 954 NHPLADEIHEYFQDLTKRASEIG 972
BLAST of Carg06904 vs. Swiss-Prot
Match:
sp|Q9M1V3|PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 391.7 bits (1005), Expect = 1.8e-107
Identity = 220/688 (31.98%), Postives = 383/688 (55.67%), Query Frame = 0
Query: 49 MESLVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMR-FDAAVSHRVF 108
+ S LL ACA++ ++R G E+H ++ G + + AL+ Y + D + + R+F
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLG-YHSTGFIVNALVSMYAKNDDLSAARRLF 241
Query: 109 SSMEVR-NVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESL 168
+ + + V WN++++ Y G + L+LF M G ++ T++ + AC
Sbjct: 242 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 301
Query: 169 QLGMQLHQLAIKFN-FIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISA 228
+LG ++H +K + +L+V NAL+ MY+ G++ + + + +D WNS+I
Sbjct: 302 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 361
Query: 229 YIAFGFHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMEL 288
Y+ + EA+ + M G K D+ ++ +++ L++ + G LHA+ +K G +
Sbjct: 362 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN-LLAGMELHAYVIKHGWDS 421
Query: 289 DVFLGNALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMC 348
++ +GN L+ MY + N + F +M D+IS T+I A++ +A ELF +
Sbjct: 422 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 481
Query: 349 ESEIKFNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEG 408
+ ++ + + S+L ++ + IH ++ GL ++T + L ++Y CR+ G
Sbjct: 482 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMG 541
Query: 409 SATTLFIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHMI-SELEPNSVTIISILTSCT 468
AT +F +D++SW S+ISS N N +A+ LF M+ + L +SV ++ IL++
Sbjct: 542 YATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 601
Query: 469 QLAHLPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSW 528
L+ L G+ +H Y R+G F L+ S+A A + MYA CG +Q A+ +F ++ + ++ +
Sbjct: 602 SLSALNKGREIHCYLLRKG--FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQY 661
Query: 529 NAMITGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVR 588
+MI YGMHG G A F +M + P++ISF+++L ACSH+GL G M
Sbjct: 662 TSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEH 721
Query: 589 DFGIAPQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVE 648
++ + P HY C+VD+LGR EA + M EP A +W ALL++C+ S K++ E
Sbjct: 722 EYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGE 781
Query: 649 TIFRKLVELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQV 708
++L+ELEP NPGN VL+SN++A G W++V ++R ++ G+ K PG SWI + +V
Sbjct: 782 IAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKV 841
Query: 709 HYFTATDVSHPQSEEIYENLNSLTSLIQ 733
H FTA D SHP+S+EIYE L+ +T ++
Sbjct: 842 HKFTARDKSHPESKEIYEKLSEVTRKLE 864
BLAST of Carg06904 vs. TrEMBL
Match:
tr|A0A1S3BNK9|A0A1S3BNK9_CUCME (pentatricopeptide repeat-containing protein At2g13600-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491511 PE=4 SV=1)
HSP 1 Score: 1219.9 bits (3155), Expect = 0.0e+00
Identity = 631/847 (74.50%), Postives = 676/847 (79.81%), Query Frame = 0
Query: 1 MEISATLSIHGRSPTPKQA--IIVSKDWNLIIKHQTKLKNDHAILSTYTQMESL------ 60
MEI+ LS HG S TPKQ I VSKDWN IIKH TKLKNDHAILSTYTQMESL
Sbjct: 1 MEIAVNLSYHGLSSTPKQTHLINVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDS 60
Query: 61 ------------------------------------------------------------ 120
Sbjct: 61 ATMPLVLKACGRLNAIDKGVRIHSCIRGSDLINDVRVGTALVDFYCKCGLVAEASKVFVE 120
Query: 121 --------------------------------------------VPLLLACAEMLELRLG 180
V LLLAC EMLELRLG
Sbjct: 121 MPERDLVSWNALISGXXXXXXXXXXXXXXXXXKKAGLTPNSRTVVALLLACGEMLELRLG 180
Query: 181 HEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNI 240
EIHGYCLRNGLFDMDA+VGTAL+GFY+RFDA +SHRVFS M VRN+VSWNA+ITG+LN+
Sbjct: 181 QEIHGYCLRNGLFDMDAYVGTALVGFYLRFDAVLSHRVFSLMVVRNIVSWNAIITGFLNV 240
Query: 241 GDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVL 300
GDYTKALKLFSSML EGIKFDAVTML+VIQACAE L+LGMQLHQLAIKFN I D+FVL
Sbjct: 241 GDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDVFVL 300
Query: 301 NALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLK 360
NALLNMYSDNG LESSC LFNAVPTSDAALWNSMIS YI FGFHAEAIAL+IKMRLE +K
Sbjct: 301 NALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGFHAEAIALFIKMRLERIK 360
Query: 361 EDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQK 420
ED RT+ IMLSLC DLNDGS+WGRGLHAHAMKSG+ELD FLGNALLSMYV+HNQI+AAQ
Sbjct: 361 EDVRTIVIMLSLCNDLNDGSLWGRGLHAHAMKSGIELDAFLGNALLSMYVKHNQINAAQN 420
Query: 421 LFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSD 480
+F+K RGLDVIS NTMI ALA+S FRAKAFELF MCESEIKFNSYT+ISLLALCKDG+D
Sbjct: 421 VFEKTRGLDVISWNTMISALAQSMFRAKAFELFFMMCESEIKFNSYTIISLLALCKDGND 480
Query: 481 LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISS 540
LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINC DE +A +F RCPQRDLISWNSLI S
Sbjct: 481 LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAIDMFTRCPQRDLISWNSLILS 540
Query: 541 YIKNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFEL 600
YIKNDNAGKALLLFNHMISELEPNSVTII+ILTSCTQLAHLPLGQCLHAY TRR ES E+
Sbjct: 541 YIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHLPLGQCLHAYATRREESLEM 600
Query: 601 DASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQML 660
DASLANAFITMYARCGKMQYAE+IF TL+ RNIVSWNAMITGYGMHGRG DATLAFAQML
Sbjct: 601 DASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMITGYGMHGRGRDATLAFAQML 660
Query: 661 DDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHF 720
DDGFKPNN+SF SVLSACSHSGLT+TGL LF SMVRDFG+APQL HYGC+VDLLGRGGHF
Sbjct: 661 DDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLAPQLTHYGCMVDLLGRGGHF 720
Query: 721 AEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIY 736
+EAIA I++MP+EPDASIWRALLSS Q+KSNKKL+ETIF KLVELEPSNPGNF+LLSNIY
Sbjct: 721 SEAIAFINTMPIEPDASIWRALLSSWQIKSNKKLLETIFGKLVELEPSNPGNFILLSNIY 780
BLAST of Carg06904 vs. TrEMBL
Match:
tr|A0A1S4DXL9|A0A1S4DXL9_CUCME (pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491511 PE=4 SV=1)
HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 589/685 (85.99%), Postives = 635/685 (92.70%), Query Frame = 0
Query: 51 SLVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSM 110
++V LLLAC EMLELRLG EIHGYCLRNGLFDMDA+VGTAL+GFY+RFDA +SHRVFS M
Sbjct: 43 TVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYLRFDAVLSHRVFSLM 102
Query: 111 EVRNVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGM 170
VRN+VSWNA+ITG+LN+GDYTKALKLFSSML EGIKFDAVTML+VIQACAE L+LGM
Sbjct: 103 VVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGM 162
Query: 171 QLHQLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFG 230
QLHQLAIKFN I D+FVLNALLNMYSDNG LESSC LFNAVPTSDAALWNSMIS YI FG
Sbjct: 163 QLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFG 222
Query: 231 FHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLG 290
FHAEAIAL+IKMRLE +KED RT+ IMLSLC DLNDGS+WGRGLHAHAMKSG+ELD FLG
Sbjct: 223 FHAEAIALFIKMRLERIKEDVRTIVIMLSLCNDLNDGSLWGRGLHAHAMKSGIELDAFLG 282
Query: 291 NALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIK 350
NALLSMYV+HNQI+AAQ +F+K RGLDVIS NTMI ALA+S FRAKAFELF MCESEIK
Sbjct: 283 NALLSMYVKHNQINAAQNVFEKTRGLDVISWNTMISALAQSMFRAKAFELFFMMCESEIK 342
Query: 351 FNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTL 410
FNSYT+ISLLALCKDG+DLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINC DE +A +
Sbjct: 343 FNSYTIISLLALCKDGNDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAIDM 402
Query: 411 FIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLP 470
F RCPQRDLISWNSLI SYIKNDNAGKALLLFNHMISELEPNSVTII+ILTSCTQLAHLP
Sbjct: 403 FTRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHLP 462
Query: 471 LGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITG 530
LGQCLHAY TRR ES E+DASLANAFITMYARCGKMQYAE+IF TL+ RNIVSWNAMITG
Sbjct: 463 LGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMITG 522
Query: 531 YGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAP 590
YGMHGRG DATLAFAQMLDDGFKPNN+SF SVLSACSHSGLT+TGL LF SMVRDFG+AP
Sbjct: 523 YGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLAP 582
Query: 591 QLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKL 650
QL HYGC+VDLLGRGGHF+EAIA I++MP+EPDASIWRALLSS Q+KSNKKL+ETIF KL
Sbjct: 583 QLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSNKKLLETIFGKL 642
Query: 651 VELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFTAT 710
VELEPSNPGNF+LLSNIYAAAGLWSEV QIRKWLR++GL KPPGTSWIVIG+QVHYFTAT
Sbjct: 643 VELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQVHYFTAT 702
Query: 711 DVSHPQSEEIYENLNSLTSLIQDMG 736
DV HPQSE+IYENLNSLTSLIQDMG
Sbjct: 703 DVLHPQSEKIYENLNSLTSLIQDMG 727
BLAST of Carg06904 vs. TrEMBL
Match:
tr|A0A2N9IVN7|A0A2N9IVN7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56003 PE=4 SV=1)
HSP 1 Score: 921.0 bits (2379), Expect = 1.7e-264
Identity = 474/848 (55.90%), Postives = 584/848 (68.87%), Query Frame = 0
Query: 3 ISATLSIHGRS--PTPKQAIIVS---KDWNLIIKHQTKLKNDHAILSTYTQMESL----- 62
+S TLS+ + P+Q +I + K WN IIKH TKLK+DHAIL+TYTQM SL
Sbjct: 8 VSVTLSLQNQKVPSIPRQGLIKNPPKKQWNSIIKHHTKLKDDHAILTTYTQMASLGLAPD 67
Query: 63 ------------------------------------------------------------ 122
Sbjct: 68 NATLPLVLKACARLNAIESGKTIHFSILGTSLIQDVRVRTALVDFYCKCGLIEEARKVFD 127
Query: 123 ---------------------------------------------VPLLLACAEMLELRL 182
V LLLA E+LELR+
Sbjct: 128 EMCERDVVSWNALISGYVGCCYHEEAVFLFREMEREGFKPNSRTVVALLLASEEVLELRI 187
Query: 183 GHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLN 242
G EIHGYCLRNGLFD+D HVGTALIGFY+RFD +S VF M VR++VSWNAMITGY++
Sbjct: 188 GQEIHGYCLRNGLFDLDPHVGTALIGFYLRFDVRISRLVFDLMVVRSIVSWNAMITGYVD 247
Query: 243 IGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFV 302
+G+Y +ALKLF SML G+ FD+VTML+VIQAC E SLQLGMQ+HQ+AIK ++GDL++
Sbjct: 248 VGNYLEALKLFMSMLENGVPFDSVTMLVVIQACVEFGSLQLGMQIHQMAIKLKYVGDLYI 307
Query: 303 LNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGL 362
+NALLNMYS+NG L SSCALF+ +P D ALWNSMISAYI FG + EA+ L+I MR EG+
Sbjct: 308 VNALLNMYSENGSLASSCALFDTIPACDVALWNSMISAYIGFGCYEEALRLFISMRTEGI 367
Query: 363 KEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQ 422
KED+RT+ I+LS C DG G+ LHAHA KS M++D+ LGNALLSMY + N ++A Q
Sbjct: 368 KEDERTIAIILSSCAKFTDGLRKGKSLHAHATKSRMKIDISLGNALLSMYADLNCVEAVQ 427
Query: 423 KLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGS 482
K+F ++R LD++S NT+ILALA ++ R +A++LF M ESE K NSYT+IS+LA C+D +
Sbjct: 428 KVFAELRSLDIVSWNTLILALAHNRMRIEAWKLFGVMRESEFKPNSYTIISILATCEDET 487
Query: 483 DLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLIS 542
L GRSIHGF +K+G+E+N SLNT+LT+MY+NC DE SA LF CP RDLISWNS+I+
Sbjct: 488 CLNVGRSIHGFVVKHGIEVNLSLNTTLTDMYMNCGDEASARILFEGCPNRDLISWNSMIA 547
Query: 543 SYIKNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFE 602
+YI ++ +ALLLFN MI E+EPNSVTII++L+SCT LA+LP GQCLHAY RR
Sbjct: 548 NYINDNQVREALLLFNRMIQEVEPNSVTIINVLSSCTDLANLPQGQCLHAYVIRRHSYLS 607
Query: 603 LDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQM 662
+ SLANAFITMYARCG MQ AEKIF TL RNI+SWNAMITGY MHGRG DA LAF QM
Sbjct: 608 FNLSLANAFITMYARCGSMQKAEKIFKTLPRRNIISWNAMITGYRMHGRGDDAILAFLQM 667
Query: 663 LDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGH 722
L++G++PN ++F+SV+SACSHSGL + GL+LF SMV+DF I P+L HYGC+VDLLGRGG
Sbjct: 668 LEEGYQPNGVTFLSVISACSHSGLIEKGLELFHSMVKDFKITPELVHYGCVVDLLGRGGR 727
Query: 723 FAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNI 736
EA I SMP+EPDAS+WRALLSSC+V ++ KL E IF KLVELEP NPGN+VLLSNI
Sbjct: 728 LDEAREFIQSMPIEPDASVWRALLSSCRVNNDTKLAENIFEKLVELEPMNPGNYVLLSNI 787
BLAST of Carg06904 vs. TrEMBL
Match:
tr|A0A2I4FH18|A0A2I4FH18_9ROSI (putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic isoform X1 OS=Juglans regia OX=51240 GN=LOC108998716 PE=4 SV=1)
HSP 1 Score: 884.4 bits (2284), Expect = 1.7e-253
Identity = 465/845 (55.03%), Postives = 570/845 (67.46%), Query Frame = 0
Query: 1 MEISATLSIHGRSPTPKQAIIVSKDWNLIIKHQTKLKNDHAILSTYTQMES--------- 60
ME+ TLSI TPK+ K+WN IIKH+TKLK+D +IL+TYTQM S
Sbjct: 1 MELPVTLSIREVPLTPKRN--HPKEWNSIIKHRTKLKDDLSILTTYTQMASRGIAADSDT 60
Query: 61 ------------------------------------------------------------ 120
Sbjct: 61 LPLVLKACSRLNAVESGKSIHSSIRGTILIRDVRVGTALVDFYCKCGLIEEARKVFDEMG 120
Query: 121 -----------------------------------------LVPLLLACAEMLELRLGHE 180
+V LLLAC E+LEL+LG E
Sbjct: 121 EKDVVSWXXXXXXXXXXXXXXXXXXXXXXXEREGFRPNSRTVVALLLACEEVLELKLGQE 180
Query: 181 IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNIGD 240
+HGYCLRNGL D++ HVGTALIGFY+RFDA +S VF M VR++VSWNAMI GY+++GD
Sbjct: 181 MHGYCLRNGLLDLNPHVGTALIGFYLRFDARISRLVFDLMVVRSIVSWNAMINGYVDVGD 240
Query: 241 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNA 300
Y +ALKLF SML +G+ FD+VT L IQACAE L LG QLHQ+AIK + DL+V+NA
Sbjct: 241 YLEALKLFLSMLMDGVHFDSVTTLGCIQACAELGYLGLGTQLHQMAIKLKYANDLYVINA 300
Query: 301 LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED 360
LL MYS+NG L+S+ LF P D ALWNSMISAYI FG EA++L+ MR +G+KED
Sbjct: 301 LLTMYSENGSLDSAYKLFGGTPARDVALWNSMISAYINFGDFEEALSLFSSMRTKGIKED 360
Query: 361 KRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF 420
+RT+ +LS C L DG G+ LHAHA KSGM++DV LGNALLSMY E N ++A QK+F
Sbjct: 361 ERTIVTVLSSCSKLADGLRKGKSLHAHATKSGMKMDVSLGNALLSMYAELNCVEAVQKVF 420
Query: 421 DKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV 480
K+R D+IS NT+ILALA +K R++A++LF M ESE K N YT+IS+LA C D + L
Sbjct: 421 AKLRDSDIISWNTVILALAHNKMRSEAWKLFGLMRESEFKPNPYTIISILATCDDETCLN 480
Query: 481 FGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISSYI 540
GRSIHGF +K+ +EIN SLNT+LT+MY+ DE SA TLF CP+RDLISWN++I+ YI
Sbjct: 481 IGRSIHGFVVKHAIEINLSLNTALTDMYMKSGDEASARTLFDCCPKRDLISWNAMITGYI 540
Query: 541 KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA 600
++ A KAL LFNHMI E+EPNSVTI+S+L+SCT LA+LP G+CLHAY TRR F +
Sbjct: 541 NDNQAIKALYLFNHMILEVEPNSVTIMSVLSSCTDLANLPQGKCLHAYATRRDSYFGFNL 600
Query: 601 SLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD 660
SLANAFI MYARCG MQ A+ IF TL RNI++WNAMI GY MHGRG+DA +F QML+D
Sbjct: 601 SLANAFIMMYARCGSMQSAKNIFETLPRRNIIAWNAMINGYRMHGRGYDAIHSFLQMLED 660
Query: 661 GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE 720
G+ PN +F+SV+SACSHSG + GL+LF SMV+DF I P+L HYGC+VDLLGRGG E
Sbjct: 661 GYTPNGATFLSVISACSHSGFIEKGLELFHSMVQDFKIEPELVHYGCVVDLLGRGGRLDE 720
Query: 721 AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA 736
A I SMP++PDAS+WRALLS+C+V S+ KL E IF KL+ELEP NPGN++LLSNIYAA
Sbjct: 721 AREFIESMPIKPDASVWRALLSACRVNSDIKLAENIFEKLIELEPMNPGNYILLSNIYAA 780
BLAST of Carg06904 vs. TrEMBL
Match:
tr|A0A061GS93|A0A061GS93_THECC (Pentatricopeptide repeat-containing protein OS=Theobroma cacao OX=3641 GN=TCM_040700 PE=4 SV=1)
HSP 1 Score: 857.8 bits (2215), Expect = 1.7e-245
Identity = 421/685 (61.46%), Postives = 528/685 (77.08%), Query Frame = 0
Query: 51 SLVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSM 110
+LV +LLAC E+ E+RLG EIHGYCLRNGLFD+D HVGTALIGFY+ F+ SH VF M
Sbjct: 161 TLVAMLLACQEVAEVRLGKEIHGYCLRNGLFDLDPHVGTALIGFYLSFNVRASHTVFDLM 220
Query: 111 EVRNVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGM 170
VRN V WNAMI GY +IG+ KALKLF ML +G++FD+VTML +IQACAE SL+LG
Sbjct: 221 AVRNTVCWNAMIKGYFDIGESLKALKLFEKMLMDGVEFDSVTMLALIQACAEFGSLELGS 280
Query: 171 QLHQLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFG 230
Q+HQ+AIK ++ DLF++NALLNMY+D G L+S+C LF+ P D ALWNSMISAY +
Sbjct: 281 QIHQMAIKCSYSNDLFIVNALLNMYADIGSLKSACKLFDVTPRRDVALWNSMISAYFEYS 340
Query: 231 FHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLG 290
+ EA +L++ MR EG KED RT+ IM SLC + DG G+ LHA+A KSGM +DV LG
Sbjct: 341 CNEEATSLFVHMRTEGNKEDDRTIVIMFSLCAESADGLRKGKSLHAYASKSGMRMDVNLG 400
Query: 291 NALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIK 350
NA+L+MY + N ID+ QK+F +M +DVIS NT+ILALAR+K ++A+E+F M E +++
Sbjct: 401 NAMLNMYAQQNCIDSVQKVFSEMSNVDVISFNTVILALARNKLGSEAWEVFGLMWELDVE 460
Query: 351 FNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTL 410
NSYT+IS+LA CKD + L GRS+HGF IK G+E+N SLNT+LT+MYINC DE +A L
Sbjct: 461 PNSYTIISILAACKDETCLNIGRSLHGFVIKQGIEVNVSLNTALTDMYINCGDEATARNL 520
Query: 411 FIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLP 470
F CP RDLISWN+LI++Y+KN+ A +A L+F+ MISE+EPNSVTII+IL+SCT LAHLP
Sbjct: 521 FESCPGRDLISWNALIATYVKNNLAHEAFLVFSRMISEVEPNSVTIINILSSCTHLAHLP 580
Query: 471 LGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITG 530
GQC HAY R+ S + SL NAFITMYARCG MQ AE+IF TL RNI+SWNA+ITG
Sbjct: 581 QGQCFHAYMLRQESSLGHNLSLGNAFITMYARCGSMQSAERIFKTLPRRNIISWNAIITG 640
Query: 531 YGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAP 590
YGMHGRG DA LAF+QML+DG+ PN ++F+SVLSACSHSG+ + GL+LF SMV DF I P
Sbjct: 641 YGMHGRGSDAILAFSQMLEDGYYPNEVTFISVLSACSHSGMIEEGLRLFDSMVHDFHITP 700
Query: 591 QLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKL 650
QLAHYGC+VDLLGR G EA I SMP++PDAS+WRALLS+ + K + IF K+
Sbjct: 701 QLAHYGCVVDLLGRAGCLDEARGFIESMPIKPDASVWRALLSAYRDHCYTKEAKAIFEKI 760
Query: 651 VELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFTAT 710
VEL+P NPGN+VL+ N YAAAGLWS+V QIR L+ KGL KPPG SWIV+ SQ+H F A
Sbjct: 761 VELDPMNPGNYVLVCNAYAAAGLWSDVRQIRTCLKAKGLRKPPGMSWIVVRSQIHSFAAG 820
Query: 711 DVSHPQSEEIYENLNSLTSLIQDMG 736
D SHP +++IY NLNSL ++++G
Sbjct: 821 DRSHPMADKIYANLNSLLHSMKEIG 845
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022944564.1 | 0.0e+00 | 86.51 | pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Cucur... | [more] |
XP_023512048.1 | 0.0e+00 | 85.33 | pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isofor... | [more] |
XP_022986695.1 | 0.0e+00 | 84.85 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... | [more] |
XP_008449715.1 | 0.0e+00 | 74.50 | PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like isoform X1... | [more] |
XP_004142223.1 | 0.0e+00 | 73.91 | PREDICTED: putative pentatricopeptide repeat-containing protein At3g01580 [Cucum... | [more] |
Match Name | E-value | Identity | Description | |
AT3G57430.1 | 1.1e-115 | 32.17 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G15510.1 | 1.2e-111 | 32.06 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G33990.1 | 1.2e-111 | 34.93 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G13650.1 | 2.0e-109 | 31.92 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G63370.1 | 9.7e-109 | 31.98 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |