BLAST of CsaV3_4G024260 vs. NCBI nr
Match:
XP_004142223.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g01580 [Cucumis sativus])
HSP 1 Score: 1388.6 bits (3593), Expect = 0.0e+00
Identity = 695/695 (100.00%), Postives = 695/695 (100.00%), Query Frame = 0
Query: 2 KKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDA 61
KKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDA
Sbjct: 153 KKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDA 212
Query: 62 VLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQAC 121
VLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQAC
Sbjct: 213 VLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQAC 272
Query: 122 AEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWN 181
AEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWN
Sbjct: 273 AEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWN 332
Query: 182 SMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMK 241
SMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMK
Sbjct: 333 SMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMK 392
Query: 242 SGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFEL 301
SGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFEL
Sbjct: 393 SGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFEL 452
Query: 302 FLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYIN 361
FLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYIN
Sbjct: 453 FLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYIN 512
Query: 362 CGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINIL 421
CGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINIL
Sbjct: 513 CGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINIL 572
Query: 422 TSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRS 481
TSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRS
Sbjct: 573 TSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRS 632
Query: 482 IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFH 541
IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFH
Sbjct: 633 IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFH 692
Query: 542 SMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNN 601
SMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNN
Sbjct: 693 SMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNN 752
Query: 602 KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVI 661
KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVI
Sbjct: 753 KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVI 812
Query: 662 GNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
GNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG
Sbjct: 813 GNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 847
BLAST of CsaV3_4G024260 vs. NCBI nr
Match:
XP_016900722.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X2 [Cucumis melo])
HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 655/696 (94.11%), Postives = 675/696 (96.98%), Query Frame = 0
Query: 1 MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFD 60
MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY+RFD
Sbjct: 32 MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYLRFD 91
Query: 61 AVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQA 120
AVLSHRVFSLM+VRNIVSWNAIITGFLNVGD KALKL+SSMLIEGIKFDAVTMLVVIQA
Sbjct: 92 AVLSHRVFSLMVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQA 151
Query: 121 CAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALW 180
CAEYGCLRLGMQLHQLAIKFNLIND+F+LNALLNMYSDNGSLESS LFNAVPTSDAALW
Sbjct: 152 CAEYGCLRLGMQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALW 211
Query: 181 NSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAM 240
NSMIS YIGFGFHAEAIALFIKMRLERIKEDVRTI IMLSLCNDLNDGS+WGRGLHAHAM
Sbjct: 212 NSMISCYIGFGFHAEAIALFIKMRLERIKEDVRTIVIMLSLCNDLNDGSLWGRGLHAHAM 271
Query: 241 KSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFE 300
KSGIELDA+LGNALLSMYVKHNQI AAQ VFEK RGLDVISWNTMISA AQSMFRAKAFE
Sbjct: 272 KSGIELDAFLGNALLSMYVKHNQINAAQNVFEKTRGLDVISWNTMISALAQSMFRAKAFE 331
Query: 301 LFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYI 360
LF MMCESEIKFNSYTI+SLLA CKDG+DLVFGRSIHGFAIKNGLEINTSLNTSLTEMYI
Sbjct: 332 LFFMMCESEIKFNSYTIISLLALCKDGNDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYI 391
Query: 361 NCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINI 420
NCGDERAA +MFTRCPQRDL+SWNSLI SYIKNDNAGKALLLFNHMISELEPNSVTIINI
Sbjct: 392 NCGDERAAIDMFTRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINI 451
Query: 421 LTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTR 480
LTSCTQLAHLPLGQCLHAY TRRE SLEMDASLANAFITMYARCGK+QYAE+IF TLQTR
Sbjct: 452 LTSCTQLAHLPLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTR 511
Query: 481 SIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLF 540
+IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLT TGL LF
Sbjct: 512 NIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLF 571
Query: 541 HSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSN 600
HSMVRDFG+APQLTHYGCMVDLLGRGGHFSEAIAFIN+MPIEPDASIWRALLSS QIKSN
Sbjct: 572 HSMVRDFGLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSN 631
Query: 601 NKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIV 660
KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIV
Sbjct: 632 KKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIV 691
Query: 661 IGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
IGNQVH+FTATDVLHPQSE+IYENLNSLTSLI+D+G
Sbjct: 692 IGNQVHYFTATDVLHPQSEKIYENLNSLTSLIQDMG 727
BLAST of CsaV3_4G024260 vs. NCBI nr
Match:
XP_008449715.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucumis melo])
HSP 1 Score: 1311.2 bits (3392), Expect = 0.0e+00
Identity = 654/695 (94.10%), Postives = 674/695 (96.98%), Query Frame = 0
Query: 2 KKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDA 61
KKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY+RFDA
Sbjct: 153 KKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYLRFDA 212
Query: 62 VLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQAC 121
VLSHRVFSLM+VRNIVSWNAIITGFLNVGD KALKL+SSMLIEGIKFDAVTMLVVIQAC
Sbjct: 213 VLSHRVFSLMVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQAC 272
Query: 122 AEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWN 181
AEYGCLRLGMQLHQLAIKFNLIND+F+LNALLNMYSDNGSLESS LFNAVPTSDAALWN
Sbjct: 273 AEYGCLRLGMQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWN 332
Query: 182 SMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMK 241
SMIS YIGFGFHAEAIALFIKMRLERIKEDVRTI IMLSLCNDLNDGS+WGRGLHAHAMK
Sbjct: 333 SMISCYIGFGFHAEAIALFIKMRLERIKEDVRTIVIMLSLCNDLNDGSLWGRGLHAHAMK 392
Query: 242 SGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFEL 301
SGIELDA+LGNALLSMYVKHNQI AAQ VFEK RGLDVISWNTMISA AQSMFRAKAFEL
Sbjct: 393 SGIELDAFLGNALLSMYVKHNQINAAQNVFEKTRGLDVISWNTMISALAQSMFRAKAFEL 452
Query: 302 FLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYIN 361
F MMCESEIKFNSYTI+SLLA CKDG+DLVFGRSIHGFAIKNGLEINTSLNTSLTEMYIN
Sbjct: 453 FFMMCESEIKFNSYTIISLLALCKDGNDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYIN 512
Query: 362 CGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINIL 421
CGDERAA +MFTRCPQRDL+SWNSLI SYIKNDNAGKALLLFNHMISELEPNSVTIINIL
Sbjct: 513 CGDERAAIDMFTRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINIL 572
Query: 422 TSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRS 481
TSCTQLAHLPLGQCLHAY TRRE SLEMDASLANAFITMYARCGK+QYAE+IF TLQTR+
Sbjct: 573 TSCTQLAHLPLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRN 632
Query: 482 IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFH 541
IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLT TGL LFH
Sbjct: 633 IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFH 692
Query: 542 SMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNN 601
SMVRDFG+APQLTHYGCMVDLLGRGGHFSEAIAFIN+MPIEPDASIWRALLSS QIKSN
Sbjct: 693 SMVRDFGLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSNK 752
Query: 602 KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVI 661
KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVI
Sbjct: 753 KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVI 812
Query: 662 GNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
GNQVH+FTATDVLHPQSE+IYENLNSLTSLI+D+G
Sbjct: 813 GNQVHYFTATDVLHPQSEKIYENLNSLTSLIQDMG 847
BLAST of CsaV3_4G024260 vs. NCBI nr
Match:
XP_023512048.1 (pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512049.1 pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512050.1 pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1221.8 bits (3160), Expect = 0.0e+00
Identity = 600/696 (86.21%), Postives = 650/696 (93.39%), Query Frame = 0
Query: 1 MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFD 60
M+KAGLTPNSRTVV LLLAC EMLELRLG EIHGYCLRNGLFDMDA+VGTAL+GFYMRFD
Sbjct: 150 MQKAGLTPNSRTVVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMRFD 209
Query: 61 AVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQA 120
A +SHRVFSLM VRN+VSWNA+ITG+LN+GD KALKL+SSML EGIKFDAVTML+VIQA
Sbjct: 210 AAVSHRVFSLMEVRNVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQA 269
Query: 121 CAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALW 180
CAE L+LGMQLHQLAIKFN ++DLF+LNALLNMYSDNG LESS ALFNAVPTSDAALW
Sbjct: 270 CAESESLQLGMQLHQLAIKFNFVDDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALW 329
Query: 181 NSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAM 240
NSMIS+YI FGFHAEAIAL+IKMRLE +KED RT+AIMLSLC DLNDGSIWGRGLHAHAM
Sbjct: 330 NSMISAYIAFGFHAEAIALYIKMRLEGLKEDKRTVAIMLSLCEDLNDGSIWGRGLHAHAM 389
Query: 241 KSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFE 300
KSG+ELD +LGNALLSMYV+HNQI AAQ +F+KMRGLDVISWNTMI A AQS FRAKAF+
Sbjct: 390 KSGMELDVFLGNALLSMYVEHNQIDAAQKLFDKMRGLDVISWNTMILALAQSKFRAKAFQ 449
Query: 301 LFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYI 360
LF+ MCESEIKFNSYT++SLLA CKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYI
Sbjct: 450 LFMTMCESEIKFNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYI 509
Query: 361 NCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINI 420
NC DE +ATN+F RCPQRDL+SWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTII+I
Sbjct: 510 NCSDEGSATNLFIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIISI 569
Query: 421 LTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTR 480
LTSCTQLAHLPLGQCLHAYTTRR S E+DASLANAFITMYARCGK+QYAEKIF TLQ R
Sbjct: 570 LTSCTQLAHLPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFNTLQAR 629
Query: 481 SIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLF 540
+IVSWNAMITGYGMHGRG DATLAFAQMLDDGFKPNN+SF SVLSACSHSGLT TGLQLF
Sbjct: 630 NIVSWNAMITGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLF 689
Query: 541 HSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSN 600
SMVRDFGIAPQL HYGC+VDLLGRGGHF+EAIA I+SMP+EPDASIWRALLSSCQ+KSN
Sbjct: 690 SSMVRDFGIAPQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSN 749
Query: 601 NKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIV 660
KL+ETIF KLVELEPSNPGNF+LLSN+YAAAGLWSEV QIRKW+R++GL KPPGTSWIV
Sbjct: 750 KKLVETIFRKLVELEPSNPGNFVLLSNVYAAAGLWSEVSQIRKWVRDKGLVKPPGTSWIV 809
Query: 661 IGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
IG+QVH+FTATDV HPQSE IYENLNSLTSLI+D+G
Sbjct: 810 IGSQVHYFTATDVSHPQSEEIYENLNSLTSLIQDMG 845
BLAST of CsaV3_4G024260 vs. NCBI nr
Match:
XP_022944564.1 (pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Cucurbita moschata] >XP_022944565.1 pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1212.6 bits (3136), Expect = 0.0e+00
Identity = 600/696 (86.21%), Postives = 646/696 (92.82%), Query Frame = 0
Query: 1 MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFD 60
M+KAGLTPNSRTVV LLLAC EMLELRLG EIHGYCLRNGLFDMDA+VGTAL+GFYMRFD
Sbjct: 150 MQKAGLTPNSRTVVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMRFD 209
Query: 61 AVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQA 120
A +SHRVFS M VRN+VSWNA+ITG+LN+GD KALKL+SSML EGIKFDAVTML+VIQA
Sbjct: 210 ATVSHRVFSSMEVRNVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQA 269
Query: 121 CAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALW 180
CAE L+LGMQLHQLAIKFN I DLF+LNALLNMYSDNG LESS ALFNAVPTSDAALW
Sbjct: 270 CAESESLQLGMQLHQLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALW 329
Query: 181 NSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAM 240
NSMIS+YI FGFHAEAIAL+IKMRLE +KED RT+ IMLSLC DLNDGSIWGRGLHAHAM
Sbjct: 330 NSMISAYIAFGFHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAM 389
Query: 241 KSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFE 300
KSG+ELD +LGNALLSMYV+HNQI AAQ +F+KMRGLDVIS NTMI A A+S FRAKAFE
Sbjct: 390 KSGMELDVFLGNALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFE 449
Query: 301 LFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYI 360
LF+ MCESEIKFNSYT++SLLA CKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYI
Sbjct: 450 LFMTMCESEIKFNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYI 509
Query: 361 NCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINI 420
NC DE +ATN+F RCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTII+I
Sbjct: 510 NCRDEGSATNLFIRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIISI 569
Query: 421 LTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTR 480
LTSCTQLAHLPLGQCLHAYTTRR S E+DASLANAFITMYARCGK+QYAEKIF TL+ R
Sbjct: 570 LTSCTQLAHLPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKAR 629
Query: 481 SIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLF 540
+IVSWNAMITGYGMHGRG DATLAFAQMLDDGFKPNN+SF SVLSACSHSGLT TGLQLF
Sbjct: 630 NIVSWNAMITGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLF 689
Query: 541 HSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSN 600
SMVRDFGIAPQL HYGC+VDLLGRGGHF+EAIA I+SMP+EPDASIWRALLSSCQ+KSN
Sbjct: 690 SSMVRDFGIAPQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSN 749
Query: 601 NKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIV 660
KL+ETIF KLVELEPSNPGNF+LLSNIYAAAGLWSEV QIRKWLR++GL KPPGTSWIV
Sbjct: 750 KKLVETIFRKLVELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIV 809
Query: 661 IGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
IG+QVH+FTATDV HPQSE IYENLNSLTSLI+D+G
Sbjct: 810 IGSQVHYFTATDVSHPQSEEIYENLNSLTSLIQDMG 845
BLAST of CsaV3_4G024260 vs. TAIR10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 420.2 bits (1079), Expect = 2.4e-117
Identity = 243/713 (34.08%), Postives = 402/713 (56.38%), Query Frame = 0
Query: 5 GLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMR---FDA 64
G+ P++ ALL A ++ ++ LG++IH + + G V LV Y + F A
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 65 VLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQAC 124
V ++VF + RN VSWN++I+ + AL+ + ML E ++ + T++ V+ AC
Sbjct: 152 V--YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC 211
Query: 125 AEYGC---LRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAA 184
+ L +G Q+H ++ +N FI+N L+ MY G L SS L + D
Sbjct: 212 SNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 271
Query: 185 LWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAH 244
WN+++SS EA+ +M LE ++ D TI+ +L C+ L + G+ LHA+
Sbjct: 272 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL-EMLRTGKELHAY 331
Query: 245 AMKSG-IELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAK 304
A+K+G ++ ++++G+AL+ MY Q+ + + VF+ M + WN MI+ ++Q+ +
Sbjct: 332 ALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKE 391
Query: 305 AFELFLMMCESE-IKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLT 364
A LF+ M ES + NS T+ ++ C +IHGF +K GL+ + + +L
Sbjct: 392 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 451
Query: 365 EMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-------- 424
+MY G A +F + RDLV+WN++I+ Y+ +++ ALLL + M +
Sbjct: 452 DMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 511
Query: 425 ----ELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARC 484
L+PNS+T++ IL SC L+ L G+ +HAY + +L D ++ +A + MYA+C
Sbjct: 512 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN--NLATDVAVGSALVDMYAKC 571
Query: 485 GKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVL 544
G LQ + K+F + +++++WN +I YGMHG G++A M+ G KPN V+F SV
Sbjct: 572 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVF 631
Query: 545 SACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIE-P 604
+ACSHSG+ GL++F+ M D+G+ P HY C+VDLLGR G EA +N MP +
Sbjct: 632 AACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 691
Query: 605 DASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRK 664
A W +LL + +I +N ++ E L++LEP+ +++LL+NIY++AGLW + ++R+
Sbjct: 692 KAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 751
Query: 665 WLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
++E+G+ K PG SWI G++VH F A D HPQSE++ L +L +R G
Sbjct: 752 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEG 798
BLAST of CsaV3_4G024260 vs. TAIR10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 404.8 bits (1039), Expect = 1.1e-112
Identity = 226/694 (32.56%), Postives = 373/694 (53.75%), Query Frame = 0
Query: 5 GLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLS 64
G+ P ++L AC ++ L +G+++HG L+ G F D YV ALV Y ++S
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG-FSSDTYVCNALVSLYFHLGNLIS 342
Query: 65 -HRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAE 124
+FS M R+ V++N +I G G KA++L+ M ++G++ D+ T+ ++ AC+
Sbjct: 343 AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA 402
Query: 125 YGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSM 184
G L G QLH K ++ I ALLN+Y+ +E++ F + LWN M
Sbjct: 403 DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM 462
Query: 185 ISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSG 244
+ +Y + +F +M++E I + T +L C L D + G +H+ +K+
Sbjct: 463 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL-GEQIHSQIIKTN 522
Query: 245 IELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFL 304
+L+AY+ + L+ MY K ++ A + + G DV+SW TMI+ + Q F KA F
Sbjct: 523 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 582
Query: 305 MMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCG 364
M + I+ + + + ++ C L G+ IH A +G + +L +Y CG
Sbjct: 583 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 642
Query: 365 DERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILT 424
+ F + D ++WN+L+S + ++ N +AL +F M E ++ N+ T + +
Sbjct: 643 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 702
Query: 425 SCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSI 484
+ ++ A++ G+ +HA T+ + + + NA I+MYA+CG + AEK F + T++
Sbjct: 703 AASETANMKQGKQVHAVITK--TGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 762
Query: 485 VSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHS 544
VSWNA+I Y HG G +A +F QM+ +PN+V+ VLSACSH GL G+ F S
Sbjct: 763 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFES 822
Query: 545 MVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNK 604
M ++G++P+ HY C+VD+L R G S A FI MPI+PDA +WR LLS+C + N +
Sbjct: 823 MNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNME 882
Query: 605 LLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIG 664
+ E L+ELEP + ++LLSN+YA + W R+ ++E+G+ K PG SWI +
Sbjct: 883 IGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVK 942
Query: 665 NQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
N +H F D HP ++ I+E LT ++G
Sbjct: 943 NSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIG 972
BLAST of CsaV3_4G024260 vs. TAIR10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 394.4 bits (1012), Expect = 1.4e-109
Identity = 229/683 (33.53%), Postives = 366/683 (53.59%), Query Frame = 0
Query: 16 LLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFSLMLVR 75
LL C + ELR +I +NGL+ + + T LV + R+ +V + RVF + +
Sbjct: 43 LLERCSSLKELR---QILPLVFKNGLY-QEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK 102
Query: 76 NIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLH 135
V ++ ++ GF V D KAL+ + M + ++ +++ C + LR+G ++H
Sbjct: 103 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 162
Query: 136 QLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHA 195
L +K DLF + L NMY+ + + +F+ +P D WN++++ Y G
Sbjct: 163 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 222
Query: 196 EAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNAL 255
A+ + M E +K TI +L + L S+ G+ +H +AM+SG + + AL
Sbjct: 223 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV-GKEIHGYAMRSGFDSLVNISTAL 282
Query: 256 LSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNS 315
+ MY K + A+ +F+ M +V+SWN+MI A+ Q+ +A +F M + +K
Sbjct: 283 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 342
Query: 316 YTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTR 375
+++ L C D DL GR IH +++ GL+ N S+ SL MY C + A +MF +
Sbjct: 343 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 402
Query: 376 CPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLPLG 435
R LVSWN++I + +N AL F+ M S ++P++ T ++++T+ +L+
Sbjct: 403 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 462
Query: 436 QCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYG 495
+ +H R L+ + + A + MYA+CG + A IF + R + +WNAMI GYG
Sbjct: 463 KWIHGVVMRS--CLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 522
Query: 496 MHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQL 555
HG G+ A F +M KPN V+F SV+SACSHSGL GL+ F+ M ++ I +
Sbjct: 523 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 582
Query: 556 THYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVE 615
HYG MVDLLGR G +EA FI MP++P +++ A+L +CQI N E +L E
Sbjct: 583 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 642
Query: 616 LEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQVHHFTATDV 675
L P + G +LL+NIY AA +W +V Q+R + +GL K PG S + I N+VH F +
Sbjct: 643 LNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGST 702
Query: 676 LHPQSERIYENLNSLTSLIRDLG 697
HP S++IY L L I++ G
Sbjct: 703 AHPDSKKIYAFLEKLICHIKEAG 718
BLAST of CsaV3_4G024260 vs. TAIR10
Match:
AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 393.3 bits (1009), Expect = 3.2e-109
Identity = 223/698 (31.95%), Postives = 366/698 (52.44%), Query Frame = 0
Query: 1 MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRF- 60
M++ + + VAL+ C G +++ L + + + +G A + ++RF
Sbjct: 85 MQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL-SSMSSLGVELGNAFLAMFVRFG 144
Query: 61 DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSML-IEGIKFDAVTMLVVI 120
+ V + VF M RN+ SWN ++ G+ G +A+ LY ML + G+K D T V+
Sbjct: 145 NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVL 204
Query: 121 QACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAA 180
+ C L G ++H +++ D+ ++NAL+ MY G ++S+ LF+ +P D
Sbjct: 205 RTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDII 264
Query: 181 LWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAH 240
WN+MIS Y G E + LF MR + D+ T+ ++S C L D + GR +HA+
Sbjct: 265 SWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL-GRDIHAY 324
Query: 241 AMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKA 300
+ +G +D + N+L MY+ A+ +F +M D++SW TMIS + + KA
Sbjct: 325 VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKA 384
Query: 301 FELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEM 360
+ + MM + +K + T+ ++L+ C DL G +H AIK L + +L M
Sbjct: 385 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINM 444
Query: 361 YINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTII 420
Y C A ++F P+++++SW S+I+ N+ +AL+ M L+PN++T+
Sbjct: 445 YSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLT 504
Query: 421 NILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQ 480
L +C ++ L G+ +HA+ R V L D L NA + MY RCG++ A F Q
Sbjct: 505 AALAACARIGALMCGKEIHAHVLRTGVGL--DDFLPNALLDMYVRCGRMNTAWSQF-NSQ 564
Query: 481 TRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQ 540
+ + SWN ++TGY G+G F +M+ +P+ ++F S+L CS S + GL
Sbjct: 565 KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLM 624
Query: 541 LFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIK 600
F S + D+G+ P L HY C+VDLLGR G EA FI MP+ PD ++W ALL++C+I
Sbjct: 625 YF-SKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIH 684
Query: 601 SNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSW 660
L E + EL+ + G +ILL N+YA G W EV ++R+ ++E GL G SW
Sbjct: 685 HKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSW 744
Query: 661 IVIGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
+ + +VH F + D HPQ++ I L + ++G
Sbjct: 745 VEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVG 776
BLAST of CsaV3_4G024260 vs. TAIR10
Match:
AT3G02330.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 390.6 bits (1002), Expect = 2.1e-108
Identity = 241/713 (33.80%), Postives = 370/713 (51.89%), Query Frame = 0
Query: 1 MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFD 60
M + G+ + RT +L C + + LG +IHG +R G D D +AL+ Y +
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC-DTDVVAASALLDMYAKGK 230
Query: 61 A-VLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQ 120
V S RVF + +N VSW+AII G + + ALK + M V++
Sbjct: 231 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 290
Query: 121 ACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAAL 180
+CA LRLG QLH A+K + D + A L+MY+ +++ + LF+ +
Sbjct: 291 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 350
Query: 181 WNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHA 240
+N+MI+ Y +A+ LF ++ + D +++ + C L G G ++ A
Sbjct: 351 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRAC-ALVKGLSEGLQIYGLA 410
Query: 241 MKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAF 300
+KS + LD + NA + MY K + A VF++MR D +SWN +I+A Q+ +
Sbjct: 411 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 470
Query: 301 ELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMY 360
LF+ M S I+ + +T S+L C GS L +G IH +K+G+ N+S+ SL +MY
Sbjct: 471 FLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMY 530
Query: 361 INCGDERAATNMFTRCPQR--------------------DLVSWNSLISSYIKNDNAGKA 420
CG A + +R QR VSWNS+IS Y+ + + A
Sbjct: 531 SKCGMIEEAEKIHSRFFQRANVXXXXXXXXXXXXXXXXXXXVSWNSIISGYVMKEQSEDA 590
Query: 421 LLLFNHMIS-ELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFI 480
+LF M+ + P+ T +L +C LA LG+ +HA ++E L+ D + + +
Sbjct: 591 QMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQSDVYICSTLV 650
Query: 481 TMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNV 540
MY++CG L + +F R V+WNAMI GY HG+G +A F +M+ + KPN+V
Sbjct: 651 DMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHV 710
Query: 541 SFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINS 600
+F S+L AC+H GL GL+ F+ M RD+G+ PQL HY MVD+LG+ G A+ I
Sbjct: 711 TFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIRE 770
Query: 601 MPIEPDASIWRALLSSCQIKSNN-KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSE 660
MP E D IWR LL C I NN ++ E L+ L+P + + LLSN+YA AG+W +
Sbjct: 771 MPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEK 830
Query: 661 VVQIRKWLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTS 691
V +R+ +R L K PG SW+ + +++H F D HP+ E IYE L + S
Sbjct: 831 VSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYS 878
BLAST of CsaV3_4G024260 vs. Swiss-Prot
Match:
sp|Q7Y211|PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 420.2 bits (1079), Expect = 4.4e-116
Identity = 243/713 (34.08%), Postives = 402/713 (56.38%), Query Frame = 0
Query: 5 GLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMR---FDA 64
G+ P++ ALL A ++ ++ LG++IH + + G V LV Y + F A
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 65 VLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQAC 124
V ++VF + RN VSWN++I+ + AL+ + ML E ++ + T++ V+ AC
Sbjct: 152 V--YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC 211
Query: 125 AEYGC---LRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAA 184
+ L +G Q+H ++ +N FI+N L+ MY G L SS L + D
Sbjct: 212 SNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 271
Query: 185 LWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAH 244
WN+++SS EA+ +M LE ++ D TI+ +L C+ L + G+ LHA+
Sbjct: 272 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL-EMLRTGKELHAY 331
Query: 245 AMKSG-IELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAK 304
A+K+G ++ ++++G+AL+ MY Q+ + + VF+ M + WN MI+ ++Q+ +
Sbjct: 332 ALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKE 391
Query: 305 AFELFLMMCESE-IKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLT 364
A LF+ M ES + NS T+ ++ C +IHGF +K GL+ + + +L
Sbjct: 392 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 451
Query: 365 EMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-------- 424
+MY G A +F + RDLV+WN++I+ Y+ +++ ALLL + M +
Sbjct: 452 DMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 511
Query: 425 ----ELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARC 484
L+PNS+T++ IL SC L+ L G+ +HAY + +L D ++ +A + MYA+C
Sbjct: 512 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN--NLATDVAVGSALVDMYAKC 571
Query: 485 GKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVL 544
G LQ + K+F + +++++WN +I YGMHG G++A M+ G KPN V+F SV
Sbjct: 572 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVF 631
Query: 545 SACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIE-P 604
+ACSHSG+ GL++F+ M D+G+ P HY C+VDLLGR G EA +N MP +
Sbjct: 632 AACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 691
Query: 605 DASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRK 664
A W +LL + +I +N ++ E L++LEP+ +++LL+NIY++AGLW + ++R+
Sbjct: 692 KAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 751
Query: 665 WLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
++E+G+ K PG SWI G++VH F A D HPQSE++ L +L +R G
Sbjct: 752 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEG 798
BLAST of CsaV3_4G024260 vs. Swiss-Prot
Match:
sp|Q9SVP7|PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 404.8 bits (1039), Expect = 1.9e-111
Identity = 226/694 (32.56%), Postives = 373/694 (53.75%), Query Frame = 0
Query: 5 GLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLS 64
G+ P ++L AC ++ L +G+++HG L+ G F D YV ALV Y ++S
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG-FSSDTYVCNALVSLYFHLGNLIS 342
Query: 65 -HRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAE 124
+FS M R+ V++N +I G G KA++L+ M ++G++ D+ T+ ++ AC+
Sbjct: 343 AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA 402
Query: 125 YGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSM 184
G L G QLH K ++ I ALLN+Y+ +E++ F + LWN M
Sbjct: 403 DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM 462
Query: 185 ISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSG 244
+ +Y + +F +M++E I + T +L C L D + G +H+ +K+
Sbjct: 463 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL-GEQIHSQIIKTN 522
Query: 245 IELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFL 304
+L+AY+ + L+ MY K ++ A + + G DV+SW TMI+ + Q F KA F
Sbjct: 523 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 582
Query: 305 MMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCG 364
M + I+ + + + ++ C L G+ IH A +G + +L +Y CG
Sbjct: 583 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 642
Query: 365 DERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILT 424
+ F + D ++WN+L+S + ++ N +AL +F M E ++ N+ T + +
Sbjct: 643 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 702
Query: 425 SCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSI 484
+ ++ A++ G+ +HA T+ + + + NA I+MYA+CG + AEK F + T++
Sbjct: 703 AASETANMKQGKQVHAVITK--TGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 762
Query: 485 VSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHS 544
VSWNA+I Y HG G +A +F QM+ +PN+V+ VLSACSH GL G+ F S
Sbjct: 763 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFES 822
Query: 545 MVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNK 604
M ++G++P+ HY C+VD+L R G S A FI MPI+PDA +WR LLS+C + N +
Sbjct: 823 MNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNME 882
Query: 605 LLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIG 664
+ E L+ELEP + ++LLSN+YA + W R+ ++E+G+ K PG SWI +
Sbjct: 883 IGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVK 942
Query: 665 NQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
N +H F D HP ++ I+E LT ++G
Sbjct: 943 NSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIG 972
BLAST of CsaV3_4G024260 vs. Swiss-Prot
Match:
sp|Q3E6Q1|PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 394.4 bits (1012), Expect = 2.6e-108
Identity = 229/683 (33.53%), Postives = 366/683 (53.59%), Query Frame = 0
Query: 16 LLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFSLMLVR 75
LL C + ELR +I +NGL+ + + T LV + R+ +V + RVF + +
Sbjct: 43 LLERCSSLKELR---QILPLVFKNGLY-QEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK 102
Query: 76 NIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLH 135
V ++ ++ GF V D KAL+ + M + ++ +++ C + LR+G ++H
Sbjct: 103 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 162
Query: 136 QLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHA 195
L +K DLF + L NMY+ + + +F+ +P D WN++++ Y G
Sbjct: 163 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 222
Query: 196 EAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNAL 255
A+ + M E +K TI +L + L S+ G+ +H +AM+SG + + AL
Sbjct: 223 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV-GKEIHGYAMRSGFDSLVNISTAL 282
Query: 256 LSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNS 315
+ MY K + A+ +F+ M +V+SWN+MI A+ Q+ +A +F M + +K
Sbjct: 283 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 342
Query: 316 YTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTR 375
+++ L C D DL GR IH +++ GL+ N S+ SL MY C + A +MF +
Sbjct: 343 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 402
Query: 376 CPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLPLG 435
R LVSWN++I + +N AL F+ M S ++P++ T ++++T+ +L+
Sbjct: 403 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 462
Query: 436 QCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYG 495
+ +H R L+ + + A + MYA+CG + A IF + R + +WNAMI GYG
Sbjct: 463 KWIHGVVMRS--CLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 522
Query: 496 MHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQL 555
HG G+ A F +M KPN V+F SV+SACSHSGL GL+ F+ M ++ I +
Sbjct: 523 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 582
Query: 556 THYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVE 615
HYG MVDLLGR G +EA FI MP++P +++ A+L +CQI N E +L E
Sbjct: 583 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 642
Query: 616 LEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQVHHFTATDV 675
L P + G +LL+NIY AA +W +V Q+R + +GL K PG S + I N+VH F +
Sbjct: 643 LNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGST 702
Query: 676 LHPQSERIYENLNSLTSLIRDLG 697
HP S++IY L L I++ G
Sbjct: 703 AHPDSKKIYAFLEKLICHIKEAG 718
BLAST of CsaV3_4G024260 vs. Swiss-Prot
Match:
sp|Q9M9E2|PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)
HSP 1 Score: 393.3 bits (1009), Expect = 5.7e-108
Identity = 223/698 (31.95%), Postives = 366/698 (52.44%), Query Frame = 0
Query: 1 MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRF- 60
M++ + + VAL+ C G +++ L + + + +G A + ++RF
Sbjct: 85 MQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL-SSMSSLGVELGNAFLAMFVRFG 144
Query: 61 DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSML-IEGIKFDAVTMLVVI 120
+ V + VF M RN+ SWN ++ G+ G +A+ LY ML + G+K D T V+
Sbjct: 145 NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVL 204
Query: 121 QACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAA 180
+ C L G ++H +++ D+ ++NAL+ MY G ++S+ LF+ +P D
Sbjct: 205 RTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDII 264
Query: 181 LWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAH 240
WN+MIS Y G E + LF MR + D+ T+ ++S C L D + GR +HA+
Sbjct: 265 SWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL-GRDIHAY 324
Query: 241 AMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKA 300
+ +G +D + N+L MY+ A+ +F +M D++SW TMIS + + KA
Sbjct: 325 VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKA 384
Query: 301 FELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEM 360
+ + MM + +K + T+ ++L+ C DL G +H AIK L + +L M
Sbjct: 385 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINM 444
Query: 361 YINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTII 420
Y C A ++F P+++++SW S+I+ N+ +AL+ M L+PN++T+
Sbjct: 445 YSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLT 504
Query: 421 NILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQ 480
L +C ++ L G+ +HA+ R V L D L NA + MY RCG++ A F Q
Sbjct: 505 AALAACARIGALMCGKEIHAHVLRTGVGL--DDFLPNALLDMYVRCGRMNTAWSQF-NSQ 564
Query: 481 TRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQ 540
+ + SWN ++TGY G+G F +M+ +P+ ++F S+L CS S + GL
Sbjct: 565 KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLM 624
Query: 541 LFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIK 600
F S + D+G+ P L HY C+VDLLGR G EA FI MP+ PD ++W ALL++C+I
Sbjct: 625 YF-SKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIH 684
Query: 601 SNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSW 660
L E + EL+ + G +ILL N+YA G W EV ++R+ ++E GL G SW
Sbjct: 685 HKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSW 744
Query: 661 IVIGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
+ + +VH F + D HPQ++ I L + ++G
Sbjct: 745 VEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVG 776
BLAST of CsaV3_4G024260 vs. Swiss-Prot
Match:
sp|Q9FWA6|PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E90 PE=2 SV=2)
HSP 1 Score: 390.6 bits (1002), Expect = 3.7e-107
Identity = 241/713 (33.80%), Postives = 370/713 (51.89%), Query Frame = 0
Query: 1 MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFD 60
M + G+ + RT +L C + + LG +IHG +R G D D +AL+ Y +
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC-DTDVVAASALLDMYAKGK 230
Query: 61 A-VLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQ 120
V S RVF + +N VSW+AII G + + ALK + M V++
Sbjct: 231 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 290
Query: 121 ACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAAL 180
+CA LRLG QLH A+K + D + A L+MY+ +++ + LF+ +
Sbjct: 291 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 350
Query: 181 WNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHA 240
+N+MI+ Y +A+ LF ++ + D +++ + C L G G ++ A
Sbjct: 351 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRAC-ALVKGLSEGLQIYGLA 410
Query: 241 MKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAF 300
+KS + LD + NA + MY K + A VF++MR D +SWN +I+A Q+ +
Sbjct: 411 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 470
Query: 301 ELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMY 360
LF+ M S I+ + +T S+L C GS L +G IH +K+G+ N+S+ SL +MY
Sbjct: 471 FLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMY 530
Query: 361 INCGDERAATNMFTRCPQR--------------------DLVSWNSLISSYIKNDNAGKA 420
CG A + +R QR VSWNS+IS Y+ + + A
Sbjct: 531 SKCGMIEEAEKIHSRFFQRANVXXXXXXXXXXXXXXXXXXXVSWNSIISGYVMKEQSEDA 590
Query: 421 LLLFNHMIS-ELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFI 480
+LF M+ + P+ T +L +C LA LG+ +HA ++E L+ D + + +
Sbjct: 591 QMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQSDVYICSTLV 650
Query: 481 TMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNV 540
MY++CG L + +F R V+WNAMI GY HG+G +A F +M+ + KPN+V
Sbjct: 651 DMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHV 710
Query: 541 SFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINS 600
+F S+L AC+H GL GL+ F+ M RD+G+ PQL HY MVD+LG+ G A+ I
Sbjct: 711 TFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIRE 770
Query: 601 MPIEPDASIWRALLSSCQIKSNN-KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSE 660
MP E D IWR LL C I NN ++ E L+ L+P + + LLSN+YA AG+W +
Sbjct: 771 MPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEK 830
Query: 661 VVQIRKWLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTS 691
V +R+ +R L K PG SW+ + +++H F D HP+ E IYE L + S
Sbjct: 831 VSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYS 878
BLAST of CsaV3_4G024260 vs. TrEMBL
Match:
tr|A0A1S4DXL9|A0A1S4DXL9_CUCME (pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491511 PE=4 SV=1)
HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 655/696 (94.11%), Postives = 675/696 (96.98%), Query Frame = 0
Query: 1 MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFD 60
MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY+RFD
Sbjct: 32 MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYLRFD 91
Query: 61 AVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQA 120
AVLSHRVFSLM+VRNIVSWNAIITGFLNVGD KALKL+SSMLIEGIKFDAVTMLVVIQA
Sbjct: 92 AVLSHRVFSLMVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQA 151
Query: 121 CAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALW 180
CAEYGCLRLGMQLHQLAIKFNLIND+F+LNALLNMYSDNGSLESS LFNAVPTSDAALW
Sbjct: 152 CAEYGCLRLGMQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALW 211
Query: 181 NSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAM 240
NSMIS YIGFGFHAEAIALFIKMRLERIKEDVRTI IMLSLCNDLNDGS+WGRGLHAHAM
Sbjct: 212 NSMISCYIGFGFHAEAIALFIKMRLERIKEDVRTIVIMLSLCNDLNDGSLWGRGLHAHAM 271
Query: 241 KSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFE 300
KSGIELDA+LGNALLSMYVKHNQI AAQ VFEK RGLDVISWNTMISA AQSMFRAKAFE
Sbjct: 272 KSGIELDAFLGNALLSMYVKHNQINAAQNVFEKTRGLDVISWNTMISALAQSMFRAKAFE 331
Query: 301 LFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYI 360
LF MMCESEIKFNSYTI+SLLA CKDG+DLVFGRSIHGFAIKNGLEINTSLNTSLTEMYI
Sbjct: 332 LFFMMCESEIKFNSYTIISLLALCKDGNDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYI 391
Query: 361 NCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINI 420
NCGDERAA +MFTRCPQRDL+SWNSLI SYIKNDNAGKALLLFNHMISELEPNSVTIINI
Sbjct: 392 NCGDERAAIDMFTRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINI 451
Query: 421 LTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTR 480
LTSCTQLAHLPLGQCLHAY TRRE SLEMDASLANAFITMYARCGK+QYAE+IF TLQTR
Sbjct: 452 LTSCTQLAHLPLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTR 511
Query: 481 SIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLF 540
+IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLT TGL LF
Sbjct: 512 NIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLF 571
Query: 541 HSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSN 600
HSMVRDFG+APQLTHYGCMVDLLGRGGHFSEAIAFIN+MPIEPDASIWRALLSS QIKSN
Sbjct: 572 HSMVRDFGLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSN 631
Query: 601 NKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIV 660
KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIV
Sbjct: 632 KKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIV 691
Query: 661 IGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
IGNQVH+FTATDVLHPQSE+IYENLNSLTSLI+D+G
Sbjct: 692 IGNQVHYFTATDVLHPQSEKIYENLNSLTSLIQDMG 727
BLAST of CsaV3_4G024260 vs. TrEMBL
Match:
tr|A0A1S3BNK9|A0A1S3BNK9_CUCME (pentatricopeptide repeat-containing protein At2g13600-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491511 PE=4 SV=1)
HSP 1 Score: 1311.2 bits (3392), Expect = 0.0e+00
Identity = 654/695 (94.10%), Postives = 674/695 (96.98%), Query Frame = 0
Query: 2 KKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDA 61
KKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY+RFDA
Sbjct: 153 KKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYLRFDA 212
Query: 62 VLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQAC 121
VLSHRVFSLM+VRNIVSWNAIITGFLNVGD KALKL+SSMLIEGIKFDAVTMLVVIQAC
Sbjct: 213 VLSHRVFSLMVVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQAC 272
Query: 122 AEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWN 181
AEYGCLRLGMQLHQLAIKFNLIND+F+LNALLNMYSDNGSLESS LFNAVPTSDAALWN
Sbjct: 273 AEYGCLRLGMQLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWN 332
Query: 182 SMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMK 241
SMIS YIGFGFHAEAIALFIKMRLERIKEDVRTI IMLSLCNDLNDGS+WGRGLHAHAMK
Sbjct: 333 SMISCYIGFGFHAEAIALFIKMRLERIKEDVRTIVIMLSLCNDLNDGSLWGRGLHAHAMK 392
Query: 242 SGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFEL 301
SGIELDA+LGNALLSMYVKHNQI AAQ VFEK RGLDVISWNTMISA AQSMFRAKAFEL
Sbjct: 393 SGIELDAFLGNALLSMYVKHNQINAAQNVFEKTRGLDVISWNTMISALAQSMFRAKAFEL 452
Query: 302 FLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYIN 361
F MMCESEIKFNSYTI+SLLA CKDG+DLVFGRSIHGFAIKNGLEINTSLNTSLTEMYIN
Sbjct: 453 FFMMCESEIKFNSYTIISLLALCKDGNDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYIN 512
Query: 362 CGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINIL 421
CGDERAA +MFTRCPQRDL+SWNSLI SYIKNDNAGKALLLFNHMISELEPNSVTIINIL
Sbjct: 513 CGDERAAIDMFTRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINIL 572
Query: 422 TSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRS 481
TSCTQLAHLPLGQCLHAY TRRE SLEMDASLANAFITMYARCGK+QYAE+IF TLQTR+
Sbjct: 573 TSCTQLAHLPLGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRN 632
Query: 482 IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFH 541
IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLT TGL LFH
Sbjct: 633 IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFH 692
Query: 542 SMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNN 601
SMVRDFG+APQLTHYGCMVDLLGRGGHFSEAIAFIN+MPIEPDASIWRALLSS QIKSN
Sbjct: 693 SMVRDFGLAPQLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSNK 752
Query: 602 KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVI 661
KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVI
Sbjct: 753 KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVI 812
Query: 662 GNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
GNQVH+FTATDVLHPQSE+IYENLNSLTSLI+D+G
Sbjct: 813 GNQVHYFTATDVLHPQSEKIYENLNSLTSLIQDMG 847
BLAST of CsaV3_4G024260 vs. TrEMBL
Match:
tr|A0A2N9IVN7|A0A2N9IVN7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56003 PE=4 SV=1)
HSP 1 Score: 916.4 bits (2367), Expect = 3.9e-263
Identity = 449/696 (64.51%), Postives = 553/696 (79.45%), Query Frame = 0
Query: 1 MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFD 60
M++ G PNSRTVVALLLA E+LELR+GQEIHGYCLRNGLFD+D +VGTAL+GFY+RFD
Sbjct: 160 MEREGFKPNSRTVVALLLASEEVLELRIGQEIHGYCLRNGLFDLDPHVGTALIGFYLRFD 219
Query: 61 AVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQA 120
+S VF LM+VR+IVSWNA+ITG+++VG+ +ALKL+ SML G+ FD+VTMLVVIQA
Sbjct: 220 VRISRLVFDLMVVRSIVSWNAMITGYVDVGNYLEALKLFMSMLENGVPFDSVTMLVVIQA 279
Query: 121 CAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALW 180
C E+G L+LGMQ+HQ+AIK + DL+I+NALLNMYS+NGSL SS ALF+ +P D ALW
Sbjct: 280 CVEFGSLQLGMQIHQMAIKLKYVGDLYIVNALLNMYSENGSLASSCALFDTIPACDVALW 339
Query: 181 NSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAM 240
NSMIS+YIGFG + EA+ LFI MR E IKED RTIAI+LS C DG G+ LHAHA
Sbjct: 340 NSMISAYIGFGCYEEALRLFISMRTEGIKEDERTIAIILSSCAKFTDGLRKGKSLHAHAT 399
Query: 241 KSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFE 300
KS +++D LGNALLSMY N + A Q VF ++R LD++SWNT+I A A + R +A++
Sbjct: 400 KSRMKIDISLGNALLSMYADLNCVEAVQKVFAELRSLDIVSWNTLILALAHNRMRIEAWK 459
Query: 301 LFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYI 360
LF +M ESE K NSYTI+S+LA C+D + L GRSIHGF +K+G+E+N SLNT+LT+MY+
Sbjct: 460 LFGVMRESEFKPNSYTIISILATCEDETCLNVGRSIHGFVVKHGIEVNLSLNTTLTDMYM 519
Query: 361 NCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINI 420
NCGDE +A +F CP RDL+SWNS+I++YI ++ +ALLLFN MI E+EPNSVTIIN+
Sbjct: 520 NCGDEASARILFEGCPNRDLISWNSMIANYINDNQVREALLLFNRMIQEVEPNSVTIINV 579
Query: 421 LTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTR 480
L+SCT LA+LP GQCLHAY RR L + SLANAFITMYARCG +Q AEKIF TL R
Sbjct: 580 LSSCTDLANLPQGQCLHAYVIRRHSYLSFNLSLANAFITMYARCGSMQKAEKIFKTLPRR 639
Query: 481 SIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLF 540
+I+SWNAMITGY MHGRG DA LAF QML++G++PN V+F SV+SACSHSGL GL+LF
Sbjct: 640 NIISWNAMITGYRMHGRGDDAILAFLQMLEEGYQPNGVTFLSVISACSHSGLIEKGLELF 699
Query: 541 HSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSN 600
HSMV+DF I P+L HYGC+VDLLGRGG EA FI SMPIEPDAS+WRALLSSC++ ++
Sbjct: 700 HSMVKDFKITPELVHYGCVVDLLGRGGRLDEAREFIQSMPIEPDASVWRALLSSCRVNND 759
Query: 601 NKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIV 660
KL E IF KLVELEP NPGN++LLSNIYAAA W EV +IR WL+E+GL KPPG SWIV
Sbjct: 760 TKLAENIFEKLVELEPMNPGNYVLLSNIYAAADCWLEVTRIRTWLKEKGLHKPPGISWIV 819
Query: 661 IGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
+ +QV +FTA D+ HPQS +IY NLNSL I++ G
Sbjct: 820 VRSQVQYFTAGDLSHPQSGQIYANLNSLLCTIKENG 855
BLAST of CsaV3_4G024260 vs. TrEMBL
Match:
tr|A0A2I4FH18|A0A2I4FH18_9ROSI (putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic isoform X1 OS=Juglans regia OX=51240 GN=LOC108998716 PE=4 SV=1)
HSP 1 Score: 882.9 bits (2280), Expect = 4.8e-253
Identity = 433/695 (62.30%), Postives = 542/695 (77.99%), Query Frame = 0
Query: 2 KKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDA 61
++ G PNSRTVVALLLAC E+LEL+LGQE+HGYCLRNGL D++ +VGTAL+GFY+RFDA
Sbjct: 149 EREGFRPNSRTVVALLLACEEVLELKLGQEMHGYCLRNGLLDLNPHVGTALIGFYLRFDA 208
Query: 62 VLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQAC 121
+S VF LM+VR+IVSWNA+I G+++VGD +ALKL+ SML++G+ FD+VT L IQAC
Sbjct: 209 RISRLVFDLMVVRSIVSWNAMINGYVDVGDYLEALKLFLSMLMDGVHFDSVTTLGCIQAC 268
Query: 122 AEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWN 181
AE G L LG QLHQ+AIK NDL+++NALL MYS+NGSL+S++ LF P D ALWN
Sbjct: 269 AELGYLGLGTQLHQMAIKLKYANDLYVINALLTMYSENGSLDSAYKLFGGTPARDVALWN 328
Query: 182 SMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMK 241
SMIS+YI FG EA++LF MR + IKED RTI +LS C+ L DG G+ LHAHA K
Sbjct: 329 SMISAYINFGDFEEALSLFSSMRTKGIKEDERTIVTVLSSCSKLADGLRKGKSLHAHATK 388
Query: 242 SGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFEL 301
SG+++D LGNALLSMY + N + A Q VF K+R D+ISWNT+I A A + R++A++L
Sbjct: 389 SGMKMDVSLGNALLSMYAELNCVEAVQKVFAKLRDSDIISWNTVILALAHNKMRSEAWKL 448
Query: 302 FLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYIN 361
F +M ESE K N YTI+S+LA C D + L GRSIHGF +K+ +EIN SLNT+LT+MY+
Sbjct: 449 FGLMRESEFKPNPYTIISILATCDDETCLNIGRSIHGFVVKHAIEINLSLNTALTDMYMK 508
Query: 362 CGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINIL 421
GDE +A +F CP+RDL+SWN++I+ YI ++ A KAL LFNHMI E+EPNSVTI+++L
Sbjct: 509 SGDEASARTLFDCCPKRDLISWNAMITGYINDNQAIKALYLFNHMILEVEPNSVTIMSVL 568
Query: 422 TSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRS 481
+SCT LA+LP G+CLHAY TRR+ + SLANAFI MYARCG +Q A+ IF TL R+
Sbjct: 569 SSCTDLANLPQGKCLHAYATRRDSYFGFNLSLANAFIMMYARCGSMQSAKNIFETLPRRN 628
Query: 482 IVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFH 541
I++WNAMI GY MHGRG DA +F QML+DG+ PN +F SV+SACSHSG GL+LFH
Sbjct: 629 IIAWNAMINGYRMHGRGYDAIHSFLQMLEDGYTPNGATFLSVISACSHSGFIEKGLELFH 688
Query: 542 SMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNN 601
SMV+DF I P+L HYGC+VDLLGRGG EA FI SMPI+PDAS+WRALLS+C++ S+
Sbjct: 689 SMVQDFKIEPELVHYGCVVDLLGRGGRLDEAREFIESMPIKPDASVWRALLSACRVNSDI 748
Query: 602 KLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVI 661
KL E IF KL+ELEP NPGN+ILLSNIYAA G WSEV IR WLRE+GL KPPG SWIV+
Sbjct: 749 KLAENIFEKLIELEPMNPGNYILLSNIYAAVGRWSEVRHIRTWLREKGLNKPPGFSWIVV 808
Query: 662 GNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
+Q H+FTA+DV HPQSE+IYENLNSL SLI++ G
Sbjct: 809 RSQPHYFTASDVSHPQSEKIYENLNSLLSLIKENG 843
BLAST of CsaV3_4G024260 vs. TrEMBL
Match:
tr|A0A061GS93|A0A061GS93_THECC (Pentatricopeptide repeat-containing protein OS=Theobroma cacao OX=3641 GN=TCM_040700 PE=4 SV=1)
HSP 1 Score: 854.7 bits (2207), Expect = 1.4e-244
Identity = 417/696 (59.91%), Postives = 535/696 (76.87%), Query Frame = 0
Query: 1 MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFD 60
M++ G PNSRT+VA+LLAC E+ E+RLG+EIHGYCLRNGLFD+D +VGTAL+GFY+ F+
Sbjct: 150 MQREGFRPNSRTLVAMLLACQEVAEVRLGKEIHGYCLRNGLFDLDPHVGTALIGFYLSFN 209
Query: 61 AVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQA 120
SH VF LM VRN V WNA+I G+ ++G+ KALKL+ ML++G++FD+VTML +IQA
Sbjct: 210 VRASHTVFDLMAVRNTVCWNAMIKGYFDIGESLKALKLFEKMLMDGVEFDSVTMLALIQA 269
Query: 121 CAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALW 180
CAE+G L LG Q+HQ+AIK + NDLFI+NALLNMY+D GSL+S+ LF+ P D ALW
Sbjct: 270 CAEFGSLELGSQIHQMAIKCSYSNDLFIVNALLNMYADIGSLKSACKLFDVTPRRDVALW 329
Query: 181 NSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAM 240
NSMIS+Y + + EA +LF+ MR E KED RTI IM SLC + DG G+ LHA+A
Sbjct: 330 NSMISAYFEYSCNEEATSLFVHMRTEGNKEDDRTIVIMFSLCAESADGLRKGKSLHAYAS 389
Query: 241 KSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFE 300
KSG+ +D LGNA+L+MY + N I + Q VF +M +DVIS+NT+I A A++ ++A+E
Sbjct: 390 KSGMRMDVNLGNAMLNMYAQQNCIDSVQKVFSEMSNVDVISFNTVILALARNKLGSEAWE 449
Query: 301 LFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYI 360
+F +M E +++ NSYTI+S+LA CKD + L GRS+HGF IK G+E+N SLNT+LT+MYI
Sbjct: 450 VFGLMWELDVEPNSYTIISILAACKDETCLNIGRSLHGFVIKQGIEVNVSLNTALTDMYI 509
Query: 361 NCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINI 420
NCGDE A N+F CP RDL+SWN+LI++Y+KN+ A +A L+F+ MISE+EPNSVTIINI
Sbjct: 510 NCGDEATARNLFESCPGRDLISWNALIATYVKNNLAHEAFLVFSRMISEVEPNSVTIINI 569
Query: 421 LTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTR 480
L+SCT LAHLP GQC HAY R+E SL + SL NAFITMYARCG +Q AE+IF TL R
Sbjct: 570 LSSCTHLAHLPQGQCFHAYMLRQESSLGHNLSLGNAFITMYARCGSMQSAERIFKTLPRR 629
Query: 481 SIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLF 540
+I+SWNA+ITGYGMHGRG DA LAF+QML+DG+ PN V+F SVLSACSHSG+ GL+LF
Sbjct: 630 NIISWNAIITGYGMHGRGSDAILAFSQMLEDGYYPNEVTFISVLSACSHSGMIEEGLRLF 689
Query: 541 HSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSN 600
SMV DF I PQL HYGC+VDLLGR G EA FI SMPI+PDAS+WRALLS+ +
Sbjct: 690 DSMVHDFHITPQLAHYGCVVDLLGRAGCLDEARGFIESMPIKPDASVWRALLSAYRDHCY 749
Query: 601 NKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIV 660
K + IF K+VEL+P NPGN++L+ N YAAAGLWS+V QIR L+ +GL KPPG SWIV
Sbjct: 750 TKEAKAIFEKIVELDPMNPGNYVLVCNAYAAAGLWSDVRQIRTCLKAKGLRKPPGMSWIV 809
Query: 661 IGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 697
+ +Q+H F A D HP +++IY NLNSL ++++G
Sbjct: 810 VRSQIHSFAAGDRSHPMADKIYANLNSLLHSMKEIG 845
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_004142223.1 | 0.0e+00 | 100.00 | PREDICTED: putative pentatricopeptide repeat-containing protein At3g01580 [Cucum... | [more] |
XP_016900722.1 | 0.0e+00 | 94.11 | PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-... | [more] |
XP_008449715.1 | 0.0e+00 | 94.10 | PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like isoform X1... | [more] |
XP_023512048.1 | 0.0e+00 | 86.21 | pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isofor... | [more] |
XP_022944564.1 | 0.0e+00 | 86.21 | pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
AT3G57430.1 | 2.4e-117 | 34.08 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G13650.1 | 1.1e-112 | 32.56 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G11290.1 | 1.4e-109 | 33.53 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G15510.1 | 3.2e-109 | 31.95 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G02330.1 | 2.1e-108 | 33.80 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |