Carg06904 (gene) Silver-seed gourd

Overview
NameCarg06904
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein
LocationCucurbita_argyrosperma_scaffold_065 : 243407 .. 245944 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATTTCAGCCACCCTAAGCATTCATGGACGCTCTCCGACTCCTAAACAAGCCATCATTGTCTCAAAGGACTGGAACTTGATTATAAAGCACCAAACCAAGCTTAAGAATGACCATGCCATTCTTTCTACATATACCCAGATGGAGTCTCTTGGTATTGCACCCGATTCTGCTACAATGCCTCTTGTTCTAAAGGCTTGCGGGAGGCTCAGCGCCATTGAAAAAGGGGTACGAATTCATTCTTGTATTAGGGATTCGGATTTGATTAGAGATGTTCGGGTTGGGACTGCCTTGGTCGATTTCTATAGTAAATGTGGGCTTGTTGGAGAGGCCAGTAAAGTGTTCGATGAAATGCCTGAAAGAGATTTGGTGTCGTGGAATGCATTGATTTCGGGATATGTGGGCTGTTCCTGCTATAAAGAAGCAGTGTTGTTGTTTATAGAGATGCAAAAGGCAGGCCTCACACCCAATTCTCGTACTGTAGTGCCTCTGCTTTTGGCTTGTGCTGAGATGTTGGAACTGCGATTAGGACATGAGATTCATGGTTATTGTTTGAGAAATGGGTTGTTTGATATGGATGCACATGTTGGTACTGCTTTGATAGGATTTTATATGAGATTTGATGCAGCAGTTTCTCACCGAGTTTTTAGCTCGATGGAGGTGAGAAATGTAGTGAGTTGGAATGCAATGATAACCGGATATCTCAATATTGGAGATTACACAAAAGCTTTGAAGCTTTTTAGTAGTATGCTGACTGAGGGTATAAAGTTTGATGCTGTTACAATGCTGCTGGTTATTCAAGCCTGTGCAGAATCTGAGTCTCTCCAATTAGGCATGCAACTGCATCAGTTGGCTATCAAGTTCAATTTCATTGGTGACTTGTTCGTATTAAATGCACTGTTGAATATGTATAGTGATAATGGACGTCTGGAGTCATCATGTGCGTTGTTTAATGCCGTTCCCACCTCTGATGCCGCCTTATGGAATTCTATGATATCTGCATACATTGCCTTCGGATTTCATGCTGAAGCTATAGCTTTGTATATTAAAATGCGTTTGGAAGGCTTAAAAGAAGACAAAAGAACCGTTGAGATTATGCTGTCTTTATGCGAAGATCTAAATGATGGTTCTATTTGGGGTAGAGGCTTACATGCTCATGCCATGAAAAGTGGAATGGAACTAGATGTATTTCTGGGCAATGCATTGTTAAGCATGTATGTTGAGCACAATCAAATTGATGCTGCACAGAAACTTTTTGATAAGATGAGAGGTTTGGACGTCATCTCCTGTAACACAATGATATTAGCACTTGCTCGGAGTAAGTTTCGAGCCAAAGCATTTGAACTCTTTATGACGATGTGTGAATCAGAAATCAAGTTCAATTCATACACAATGATATCTCTCCTTGCATTATGTAAAGATGGAAGTGATTTGGTGTTTGGGCGATCGATCCATGGTTTTGCAATAAAAAATGGTCTTGAAATAAATACTTCTTTGAACACTTCACTGACTGAAATGTACATAAACTGTAGAGATGAAGGATCGGCTACAACTCTGTTTATTAGATGTCCTCAAAGAGATTTAATTTCATGGAATTCCCTAATTTCGAGCTATATAAAGAATGACAATGCAGGAAAAGCTCTATTACTTTTTAACCATATGATTTCTGAGCTGGAGCCTAACTCCGTGACAATCATAAGTATTCTCACATCTTGTACCCAGCTTGCCCATCTACCACTAGGACAGTGCTTGCATGCTTACACAACTAGAAGGGGAGAATCTTTTGAATTGGATGCTTCTCTAGCAAATGCTTTTATAACTATGTATGCACGATGTGGTAAAATGCAATATGCAGAAAAGATTTTTAGCACCCTGAAGGCAAGAAATATTGTCTCATGGAATGCCATGATAACAGGGTATGGCATGCACGGACGTGGACACGATGCTACTCTAGCCTTTGCACAGATGTTGGATGATGGTTTCAAGCCAAACAATATATCTTTTGTATCTGTTTTATCTGCCTGCAGCCATTCTGGTCTGACCAAGACCGGTTTGCAGCTTTTTAGTTCCATGGTGCGGGACTTTGGTATTGCTCCTCAACTTGCTCACTATGGTTGTATAGTTGATCTGCTTGGTCGTGGGGGCCATTTTGCTGAAGCTATAGCTCTCATCAGCTCAATGCCCGTTGAGCCTGATGCATCAATTTGGAGAGCTTTGCTCAGTTCATGTCAGGTTAAAAGCAATAAAAAACTAGTCGAAACCATCTTTAGAAAGCTTGTTGAATTAGAACCAAGCAATCCAGGGAATTTTGTTTTGCTTTCAAATATCTACGCAGCAGCAGGTCTTTGGTCAGAGGTTTCACAGATAAGAAAGTGGCTTAGAGATAAAGGTCTAGTGAAGCCTCCAGGAACTAGCTGGATTGTAATCGGAAGTCAGGTCCACTATTTCACTGCAACTGACGTATCACACCCTCAATCAGAAGAAATTTACGAAAATTTGAATTCTTTGACATCATTGATCCAAGATATGGGCTGA

mRNA sequence

ATGGAGATTTCAGCCACCCTAAGCATTCATGGACGCTCTCCGACTCCTAAACAAGCCATCATTGTCTCAAAGGACTGGAACTTGATTATAAAGCACCAAACCAAGCTTAAGAATGACCATGCCATTCTTTCTACATATACCCAGATGGAGTCTCTTGTGCCTCTGCTTTTGGCTTGTGCTGAGATGTTGGAACTGCGATTAGGACATGAGATTCATGGTTATTGTTTGAGAAATGGGTTGTTTGATATGGATGCACATGTTGGTACTGCTTTGATAGGATTTTATATGAGATTTGATGCAGCAGTTTCTCACCGAGTTTTTAGCTCGATGGAGGTGAGAAATGTAGTGAGTTGGAATGCAATGATAACCGGATATCTCAATATTGGAGATTACACAAAAGCTTTGAAGCTTTTTAGTAGTATGCTGACTGAGGGTATAAAGTTTGATGCTGTTACAATGCTGCTGGTTATTCAAGCCTGTGCAGAATCTGAGTCTCTCCAATTAGGCATGCAACTGCATCAGTTGGCTATCAAGTTCAATTTCATTGGTGACTTGTTCGTATTAAATGCACTGTTGAATATGTATAGTGATAATGGACGTCTGGAGTCATCATGTGCGTTGTTTAATGCCGTTCCCACCTCTGATGCCGCCTTATGGAATTCTATGATATCTGCATACATTGCCTTCGGATTTCATGCTGAAGCTATAGCTTTGTATATTAAAATGCGTTTGGAAGGCTTAAAAGAAGACAAAAGAACCGTTGAGATTATGCTGTCTTTATGCGAAGATCTAAATGATGGTTCTATTTGGGGTAGAGGCTTACATGCTCATGCCATGAAAAGTGGAATGGAACTAGATGTATTTCTGGGCAATGCATTGTTAAGCATGTATGTTGAGCACAATCAAATTGATGCTGCACAGAAACTTTTTGATAAGATGAGAGGTTTGGACGTCATCTCCTGTAACACAATGATATTAGCACTTGCTCGGAGTAAGTTTCGAGCCAAAGCATTTGAACTCTTTATGACGATGTGTGAATCAGAAATCAAGTTCAATTCATACACAATGATATCTCTCCTTGCATTATGTAAAGATGGAAGTGATTTGGTGTTTGGGCGATCGATCCATGGTTTTGCAATAAAAAATGGTCTTGAAATAAATACTTCTTTGAACACTTCACTGACTGAAATGTACATAAACTGTAGAGATGAAGGATCGGCTACAACTCTGTTTATTAGATGTCCTCAAAGAGATTTAATTTCATGGAATTCCCTAATTTCGAGCTATATAAAGAATGACAATGCAGGAAAAGCTCTATTACTTTTTAACCATATGATTTCTGAGCTGGAGCCTAACTCCGTGACAATCATAAGTATTCTCACATCTTGTACCCAGCTTGCCCATCTACCACTAGGACAGTGCTTGCATGCTTACACAACTAGAAGGGGAGAATCTTTTGAATTGGATGCTTCTCTAGCAAATGCTTTTATAACTATGTATGCACGATGTGGTAAAATGCAATATGCAGAAAAGATTTTTAGCACCCTGAAGGCAAGAAATATTGTCTCATGGAATGCCATGATAACAGGGTATGGCATGCACGGACGTGGACACGATGCTACTCTAGCCTTTGCACAGATGTTGGATGATGGTTTCAAGCCAAACAATATATCTTTTGTATCTGTTTTATCTGCCTGCAGCCATTCTGGTCTGACCAAGACCGGTTTGCAGCTTTTTAGTTCCATGGTGCGGGACTTTGGTATTGCTCCTCAACTTGCTCACTATGGTTGTATAGTTGATCTGCTTGGTCGTGGGGGCCATTTTGCTGAAGCTATAGCTCTCATCAGCTCAATGCCCGTTGAGCCTGATGCATCAATTTGGAGAGCTTTGCTCAGTTCATGTCAGGTTAAAAGCAATAAAAAACTAGTCGAAACCATCTTTAGAAAGCTTGTTGAATTAGAACCAAGCAATCCAGGGAATTTTGTTTTGCTTTCAAATATCTACGCAGCAGCAGGTCTTTGGTCAGAGGTTTCACAGATAAGAAAGTGGCTTAGAGATAAAGGTCTAGTGAAGCCTCCAGGAACTAGCTGGATTGTAATCGGAAGTCAGGTCCACTATTTCACTGCAACTGACGTATCACACCCTCAATCAGAAGAAATTTACGAAAATTTGAATTCTTTGACATCATTGATCCAAGATATGGGCTGA

Coding sequence (CDS)

ATGGAGATTTCAGCCACCCTAAGCATTCATGGACGCTCTCCGACTCCTAAACAAGCCATCATTGTCTCAAAGGACTGGAACTTGATTATAAAGCACCAAACCAAGCTTAAGAATGACCATGCCATTCTTTCTACATATACCCAGATGGAGTCTCTTGTGCCTCTGCTTTTGGCTTGTGCTGAGATGTTGGAACTGCGATTAGGACATGAGATTCATGGTTATTGTTTGAGAAATGGGTTGTTTGATATGGATGCACATGTTGGTACTGCTTTGATAGGATTTTATATGAGATTTGATGCAGCAGTTTCTCACCGAGTTTTTAGCTCGATGGAGGTGAGAAATGTAGTGAGTTGGAATGCAATGATAACCGGATATCTCAATATTGGAGATTACACAAAAGCTTTGAAGCTTTTTAGTAGTATGCTGACTGAGGGTATAAAGTTTGATGCTGTTACAATGCTGCTGGTTATTCAAGCCTGTGCAGAATCTGAGTCTCTCCAATTAGGCATGCAACTGCATCAGTTGGCTATCAAGTTCAATTTCATTGGTGACTTGTTCGTATTAAATGCACTGTTGAATATGTATAGTGATAATGGACGTCTGGAGTCATCATGTGCGTTGTTTAATGCCGTTCCCACCTCTGATGCCGCCTTATGGAATTCTATGATATCTGCATACATTGCCTTCGGATTTCATGCTGAAGCTATAGCTTTGTATATTAAAATGCGTTTGGAAGGCTTAAAAGAAGACAAAAGAACCGTTGAGATTATGCTGTCTTTATGCGAAGATCTAAATGATGGTTCTATTTGGGGTAGAGGCTTACATGCTCATGCCATGAAAAGTGGAATGGAACTAGATGTATTTCTGGGCAATGCATTGTTAAGCATGTATGTTGAGCACAATCAAATTGATGCTGCACAGAAACTTTTTGATAAGATGAGAGGTTTGGACGTCATCTCCTGTAACACAATGATATTAGCACTTGCTCGGAGTAAGTTTCGAGCCAAAGCATTTGAACTCTTTATGACGATGTGTGAATCAGAAATCAAGTTCAATTCATACACAATGATATCTCTCCTTGCATTATGTAAAGATGGAAGTGATTTGGTGTTTGGGCGATCGATCCATGGTTTTGCAATAAAAAATGGTCTTGAAATAAATACTTCTTTGAACACTTCACTGACTGAAATGTACATAAACTGTAGAGATGAAGGATCGGCTACAACTCTGTTTATTAGATGTCCTCAAAGAGATTTAATTTCATGGAATTCCCTAATTTCGAGCTATATAAAGAATGACAATGCAGGAAAAGCTCTATTACTTTTTAACCATATGATTTCTGAGCTGGAGCCTAACTCCGTGACAATCATAAGTATTCTCACATCTTGTACCCAGCTTGCCCATCTACCACTAGGACAGTGCTTGCATGCTTACACAACTAGAAGGGGAGAATCTTTTGAATTGGATGCTTCTCTAGCAAATGCTTTTATAACTATGTATGCACGATGTGGTAAAATGCAATATGCAGAAAAGATTTTTAGCACCCTGAAGGCAAGAAATATTGTCTCATGGAATGCCATGATAACAGGGTATGGCATGCACGGACGTGGACACGATGCTACTCTAGCCTTTGCACAGATGTTGGATGATGGTTTCAAGCCAAACAATATATCTTTTGTATCTGTTTTATCTGCCTGCAGCCATTCTGGTCTGACCAAGACCGGTTTGCAGCTTTTTAGTTCCATGGTGCGGGACTTTGGTATTGCTCCTCAACTTGCTCACTATGGTTGTATAGTTGATCTGCTTGGTCGTGGGGGCCATTTTGCTGAAGCTATAGCTCTCATCAGCTCAATGCCCGTTGAGCCTGATGCATCAATTTGGAGAGCTTTGCTCAGTTCATGTCAGGTTAAAAGCAATAAAAAACTAGTCGAAACCATCTTTAGAAAGCTTGTTGAATTAGAACCAAGCAATCCAGGGAATTTTGTTTTGCTTTCAAATATCTACGCAGCAGCAGGTCTTTGGTCAGAGGTTTCACAGATAAGAAAGTGGCTTAGAGATAAAGGTCTAGTGAAGCCTCCAGGAACTAGCTGGATTGTAATCGGAAGTCAGGTCCACTATTTCACTGCAACTGACGTATCACACCCTCAATCAGAAGAAATTTACGAAAATTTGAATTCTTTGACATCATTGATCCAAGATATGGGCTGA

Protein sequence

MEISATLSIHGRSPTPKQAIIVSKDWNLIIKHQTKLKNDHAILSTYTQMESLVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFTATDVSHPQSEEIYENLNSLTSLIQDMG
Homology
[Close]
BLAST of Carg06904 vs. NCBI nr
Match: XP_022944564.1 (pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Cucurbita moschata] >XP_022944565.1 pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 1405.6 bits (3637), Expect = 0.0e+00
Identity = 731/845 (86.51%), Postives = 732/845 (86.63%), Query Frame = 0 

Query: 1   MEISATLSIHGRSPTPKQAIIVSKDWNLIIKHQTKLKNDHAILSTYTQMESL-------- 60
           MEISATLSIHGRSPTPKQAI VSKDWNLIIKHQTKLKNDHAILSTYTQMESL        
Sbjct: 1   MEISATLSIHGRSPTPKQAINVSKDWNLIIKHQTKLKNDHAILSTYTQMESLGIAPDSAT 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  MPLVLKACGRLNAIEKGVRIHSCIRDSDLIRDVRVGTALVDFYSKCGLVGEASKVFDEMP 120

Query: 121 ------------------------------------------VPLLLACAEMLELRLGHE 180
                                                     VPLLLACAEMLELRLGHE
Sbjct: 121 ERDLVSWNALISGYVGCSCYKEAVLLFIEMQKAGLTPNSRTVVPLLLACAEMLELRLGHE 180

Query: 181 IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNIGD 240
           IHGYCLRNGLFDMDAHVGTALIGFYMRFDA VSHRVFSSMEVRNVVSWNAMITGYLNIGD
Sbjct: 181 IHGYCLRNGLFDMDAHVGTALIGFYMRFDATVSHRVFSSMEVRNVVSWNAMITGYLNIGD 240

Query: 241 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNA 300
           YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNA
Sbjct: 241 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNA 300

Query: 301 LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED 360
           LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED
Sbjct: 301 LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED 360

Query: 361 KRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF 420
           KRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF
Sbjct: 361 KRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF 420

Query: 421 DKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV 480
           DKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV
Sbjct: 421 DKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV 480

Query: 481 FGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISSYI 540
           FGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSAT LFIRCPQRDL+SWNSLISSYI
Sbjct: 481 FGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATNLFIRCPQRDLVSWNSLISSYI 540

Query: 541 KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA 600
           KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA
Sbjct: 541 KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA 600

Query: 601 SLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD 660
           SLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD
Sbjct: 601 SLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD 660

Query: 661 GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE 720
           GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE
Sbjct: 661 GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE 720

Query: 721 AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA 736
           AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA
Sbjct: 721 AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA 780

[Close]
BLAST of Carg06904 vs. NCBI nr
Match: XP_023512048.1 (pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512049.1 pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512050.1 pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1386.3 bits (3587), Expect = 0.0e+00
Identity = 721/845 (85.33%), Postives = 728/845 (86.15%), Query Frame = 0 

Query: 1   MEISATLSIHGRSPTPKQAIIVSKDWNLIIKHQTKLKNDHAILSTYTQMESL-------- 60
           MEISATLSIHGRSPTPKQAI VSKDWNLIIKHQTKLKNDHAILSTYTQMESL        
Sbjct: 1   MEISATLSIHGRSPTPKQAINVSKDWNLIIKHQTKLKNDHAILSTYTQMESLGIAPDSAT 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  MPLVLKACGRLNAIEKGVRIHSCIRDSDLIRDVRVGTALVDFYSKCGLVGEASKVFDEMP 120

Query: 121 ------------------------------------------VPLLLACAEMLELRLGHE 180
                                                     VPLLLACAEMLELRLGHE
Sbjct: 121 ERDLVSWNALISGYVGCSCYKEAVLLFMEMQKAGLTPNSRTVVPLLLACAEMLELRLGHE 180

Query: 181 IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNIGD 240
           IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFS MEVRNVVSWNAMITGYLNIGD
Sbjct: 181 IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSLMEVRNVVSWNAMITGYLNIGD 240

Query: 241 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNA 300
           YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNF+ DLFVLNA
Sbjct: 241 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFVDDLFVLNA 300

Query: 301 LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED 360
           LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED
Sbjct: 301 LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED 360

Query: 361 KRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF 420
           KRTV IMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF
Sbjct: 361 KRTVAIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF 420

Query: 421 DKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV 480
           DKMRGLDVIS NTMILALA+SKFRAKAF+LFMTMCESEIKFNSYTMISLLALCKDGSDLV
Sbjct: 421 DKMRGLDVISWNTMILALAQSKFRAKAFQLFMTMCESEIKFNSYTMISLLALCKDGSDLV 480

Query: 481 FGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISSYI 540
           FGRSIHGFAIKNGLEINTSLNTSLTEMYINC DEGSAT LFIRCPQRDLISWNSLISSYI
Sbjct: 481 FGRSIHGFAIKNGLEINTSLNTSLTEMYINCSDEGSATNLFIRCPQRDLISWNSLISSYI 540

Query: 541 KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA 600
           KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA
Sbjct: 541 KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA 600

Query: 601 SLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD 660
           SLANAFITMYARCGKMQYAEKIF+TL+ARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD
Sbjct: 601 SLANAFITMYARCGKMQYAEKIFNTLQARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD 660

Query: 661 GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE 720
           GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE
Sbjct: 661 GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE 720

Query: 721 AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA 736
           AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSN+YAA
Sbjct: 721 AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNVYAA 780

[Close]
BLAST of Carg06904 vs. NCBI nr
Match: XP_022986695.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita maxima] >XP_022986696.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 1375.9 bits (3560), Expect = 0.0e+00
Identity = 717/845 (84.85%), Postives = 725/845 (85.80%), Query Frame = 0 

Query: 1   MEISATLSIHGRSPTPKQAIIVSKDWNLIIKHQTKLKNDHAILSTYTQMESL-------- 60
           MEISATLSIHGRSPTPKQAI VSKDWNLIIKHQTKLKNDHAILSTYTQMESL        
Sbjct: 1   MEISATLSIHGRSPTPKQAINVSKDWNLIIKHQTKLKNDHAILSTYTQMESLGIAPDSAT 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  MPLVLKACGRLNAIEKGARIHSCIRDSDLIRDVRVGTALVDFYSKCGLVREASKVFDEMP 120

Query: 121 ------------------------------------------VPLLLACAEMLELRLGHE 180
                                                     VPLLLACAEMLELRLGHE
Sbjct: 121 ERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLTPNSRTVVPLLLACAEMLELRLGHE 180

Query: 181 IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNIGD 240
           IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFS ME+RNVVSWNAMITGYLNIGD
Sbjct: 181 IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSLMEMRNVVSWNAMITGYLNIGD 240

Query: 241 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNA 300
           Y KALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFI DLFVLNA
Sbjct: 241 YPKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIDDLFVLNA 300

Query: 301 LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED 360
           LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED
Sbjct: 301 LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED 360

Query: 361 KRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF 420
           KRTV IMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF
Sbjct: 361 KRTVAIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF 420

Query: 421 DKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV 480
           DK RGLDVIS NTMILALA+SKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV
Sbjct: 421 DKTRGLDVISWNTMILALAQSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV 480

Query: 481 FGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISSYI 540
           FGRSIHGFAIKNGLEINTSLNTSLTEMYIN  DEGSAT LFIRCP+RDLISWNSLISSYI
Sbjct: 481 FGRSIHGFAIKNGLEINTSLNTSLTEMYINSSDEGSATNLFIRCPERDLISWNSLISSYI 540

Query: 541 KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA 600
           KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA
Sbjct: 541 KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA 600

Query: 601 SLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD 660
           SLANAFITMYARCGKMQYAEKIF+TL+ARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD
Sbjct: 601 SLANAFITMYARCGKMQYAEKIFNTLQARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD 660

Query: 661 GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE 720
           GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCI+DLLGRGGHF+E
Sbjct: 661 GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIIDLLGRGGHFSE 720

Query: 721 AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA 736
           AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA
Sbjct: 721 AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA 780

[Close]
BLAST of Carg06904 vs. NCBI nr
Match: XP_008449715.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like isoform X1 [Cucumis melo])

HSP 1 Score: 1219.9 bits (3155), Expect = 0.0e+00
Identity = 631/847 (74.50%), Postives = 676/847 (79.81%), Query Frame = 0 

Query: 1   MEISATLSIHGRSPTPKQA--IIVSKDWNLIIKHQTKLKNDHAILSTYTQMESL------ 60
           MEI+  LS HG S TPKQ   I VSKDWN IIKH TKLKNDHAILSTYTQMESL      
Sbjct: 1   MEIAVNLSYHGLSSTPKQTHLINVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDS 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  ATMPLVLKACGRLNAIDKGVRIHSCIRGSDLINDVRVGTALVDFYCKCGLVAEASKVFVE 120

Query: 121 --------------------------------------------VPLLLACAEMLELRLG 180
                                                       V LLLAC EMLELRLG
Sbjct: 121 MPERDLVSWNALISGXXXXXXXXXXXXXXXXXKKAGLTPNSRTVVALLLACGEMLELRLG 180

Query: 181 HEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNI 240
            EIHGYCLRNGLFDMDA+VGTAL+GFY+RFDA +SHRVFS M VRN+VSWNA+ITG+LN+
Sbjct: 181 QEIHGYCLRNGLFDMDAYVGTALVGFYLRFDAVLSHRVFSLMVVRNIVSWNAIITGFLNV 240

Query: 241 GDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVL 300
           GDYTKALKLFSSML EGIKFDAVTML+VIQACAE   L+LGMQLHQLAIKFN I D+FVL
Sbjct: 241 GDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDVFVL 300

Query: 301 NALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLK 360
           NALLNMYSDNG LESSC LFNAVPTSDAALWNSMIS YI FGFHAEAIAL+IKMRLE +K
Sbjct: 301 NALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGFHAEAIALFIKMRLERIK 360

Query: 361 EDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQK 420
           ED RT+ IMLSLC DLNDGS+WGRGLHAHAMKSG+ELD FLGNALLSMYV+HNQI+AAQ 
Sbjct: 361 EDVRTIVIMLSLCNDLNDGSLWGRGLHAHAMKSGIELDAFLGNALLSMYVKHNQINAAQN 420

Query: 421 LFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSD 480
           +F+K RGLDVIS NTMI ALA+S FRAKAFELF  MCESEIKFNSYT+ISLLALCKDG+D
Sbjct: 421 VFEKTRGLDVISWNTMISALAQSMFRAKAFELFFMMCESEIKFNSYTIISLLALCKDGND 480

Query: 481 LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISS 540
           LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINC DE +A  +F RCPQRDLISWNSLI S
Sbjct: 481 LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAIDMFTRCPQRDLISWNSLILS 540

Query: 541 YIKNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFEL 600
           YIKNDNAGKALLLFNHMISELEPNSVTII+ILTSCTQLAHLPLGQCLHAY TRR ES E+
Sbjct: 541 YIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHLPLGQCLHAYATRREESLEM 600

Query: 601 DASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQML 660
           DASLANAFITMYARCGKMQYAE+IF TL+ RNIVSWNAMITGYGMHGRG DATLAFAQML
Sbjct: 601 DASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMITGYGMHGRGRDATLAFAQML 660

Query: 661 DDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHF 720
           DDGFKPNN+SF SVLSACSHSGLT+TGL LF SMVRDFG+APQL HYGC+VDLLGRGGHF
Sbjct: 661 DDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLAPQLTHYGCMVDLLGRGGHF 720

Query: 721 AEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIY 736
           +EAIA I++MP+EPDASIWRALLSS Q+KSNKKL+ETIF KLVELEPSNPGNF+LLSNIY
Sbjct: 721 SEAIAFINTMPIEPDASIWRALLSSWQIKSNKKLLETIFGKLVELEPSNPGNFILLSNIY 780

[Close]
BLAST of Carg06904 vs. NCBI nr
Match: XP_004142223.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g01580 [Cucumis sativus])

HSP 1 Score: 1213.4 bits (3138), Expect = 0.0e+00
Identity = 626/847 (73.91%), Postives = 675/847 (79.69%), Query Frame = 0 

Query: 1   MEISATLSIHGRSPTPKQA--IIVSKDWNLIIKHQTKLKNDHAILSTYTQMESL------ 60
           MEI+  LS HG S TP+Q   + VSKDWN IIKH TKLKNDHAILSTYTQMESL      
Sbjct: 1   MEIAVNLSFHGLSSTPEQTHLVNVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDS 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  ATMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVE 120

Query: 121 --------------------------------------------VPLLLACAEMLELRLG 180
                                                       V LLLAC EMLELRLG
Sbjct: 121 MPERDLVSWNALISGXXXXXXXXXXXXXXXXXKKAGLTPNSRTVVALLLACGEMLELRLG 180

Query: 181 HEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNI 240
            EIHGYCLRNGLFDMDA+VGTAL+GFYMRFDA +SHRVFS M VRN+VSWNA+ITG+LN+
Sbjct: 181 QEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHRVFSLMLVRNIVSWNAIITGFLNV 240

Query: 241 GDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVL 300
           GD  KALKL+SSML EGIKFDAVTML+VIQACAE   L+LGMQLHQLAIKFN I DLF+L
Sbjct: 241 GDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFIL 300

Query: 301 NALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLK 360
           NALLNMYSDNG LESS ALFNAVPTSDAALWNSMIS+YI FGFHAEAIAL+IKMRLE +K
Sbjct: 301 NALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIK 360

Query: 361 EDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQK 420
           ED RT+ IMLSLC DLNDGSIWGRGLHAHAMKSG+ELD +LGNALLSMYV+HNQI AAQ 
Sbjct: 361 EDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQY 420

Query: 421 LFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSD 480
           +F+KMRGLDVIS NTMI A A+S FRAKAFELF+ MCESEIKFNSYT++SLLA CKDGSD
Sbjct: 421 VFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSD 480

Query: 481 LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISS 540
           LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINC DE +AT +F RCPQRDL+SWNSLISS
Sbjct: 481 LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISS 540

Query: 541 YIKNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFEL 600
           YIKNDNAGKALLLFNHMISELEPNSVTII+ILTSCTQLAHLPLGQCLHAYTTRR  S E+
Sbjct: 541 YIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEM 600

Query: 601 DASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQML 660
           DASLANAFITMYARCGK+QYAEKIF TL+ R+IVSWNAMITGYGMHGRG DATLAFAQML
Sbjct: 601 DASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQML 660

Query: 661 DDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHF 720
           DDGFKPNN+SF SVLSACSHSGLT TGLQLF SMVRDFGIAPQL HYGC+VDLLGRGGHF
Sbjct: 661 DDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHF 720

Query: 721 AEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIY 736
           +EAIA I+SMP+EPDASIWRALLSSCQ+KSN KL+ETIF KLVELEPSNPGNF+LLSNIY
Sbjct: 721 SEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIY 780

[Close]
BLAST of Carg06904 vs. TAIR10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 414.8 bits (1065), Expect = 1.1e-115
Identity = 239/743 (32.17%), Postives = 410/743 (55.18%), Query Frame = 0 

Query: 12  RSPTPKQAIIVSKDWNLIIKHQTKLKNDHAILSTYTQMESLVPLLLACAEMLELRLGHEI 71
           RSP     ++ SK  + +++       D  +L       +   LL A A++ ++ LG +I
Sbjct: 60  RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119

Query: 72  HGYCLRNGLFDMDAHVGTALIGFYMRF-DAAVSHRVFSSMEVRNVVSWNAMITGYLNIGD 131
           H +  + G       V   L+  Y +  D    ++VF  +  RN VSWN++I+   +   
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179

Query: 132 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAE---SESLQLGMQLHQLAIKFNFIGDLFV 191
           +  AL+ F  ML E ++  + T++ V+ AC+     E L +G Q+H   ++   +   F+
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FI 239

Query: 192 LNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGL 251
           +N L+ MY   G+L SS  L  +    D   WN+++S+        EA+    +M LEG+
Sbjct: 240 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 299

Query: 252 KEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSG-MELDVFLGNALLSMYVEHNQIDAA 311
           + D+ T+  +L  C  L +    G+ LHA+A+K+G ++ + F+G+AL+ MY    Q+ + 
Sbjct: 300 EPDEFTISSVLPACSHL-EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 359

Query: 312 QKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESE-IKFNSYTMISLLALCKD 371
           +++FD M    +   N MI   ++++   +A  LF+ M ES  +  NS TM  ++  C  
Sbjct: 360 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 419

Query: 372 GSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSL 431
                   +IHGF +K GL+ +  +  +L +MY        A  +F +   RDL++WN++
Sbjct: 420 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 479

Query: 432 ISSYIKNDNAGKALLLFNHMIS------------ELEPNSVTIISILTSCTQLAHLPLGQ 491
           I+ Y+ +++   ALLL + M +             L+PNS+T+++IL SC  L+ L  G+
Sbjct: 480 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 539

Query: 492 CLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGM 551
            +HAY  +   +   D ++ +A + MYA+CG +Q + K+F  +  +N+++WN +I  YGM
Sbjct: 540 EIHAYAIK--NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 599

Query: 552 HGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLA 611
           HG G +A      M+  G KPN ++F+SV +ACSHSG+   GL++F  M  D+G+ P   
Sbjct: 600 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 659

Query: 612 HYGCIVDLLGRGGHFAEAIALISSMPVE-PDASIWRALLSSCQVKSNKKLVETIFRKLVE 671
           HY C+VDLLGR G   EA  L++ MP +   A  W +LL + ++ +N ++ E   + L++
Sbjct: 660 HYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ 719

Query: 672 LEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFTATDV 731
           LEP+   ++VLL+NIY++AGLW + +++R+ ++++G+ K PG SWI  G +VH F A D 
Sbjct: 720 LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDS 779

Query: 732 SHPQSEEIYENLNSLTSLIQDMG 736
           SHPQSE++   L +L   ++  G
Sbjct: 780 SHPQSEKLSGYLETLWERMRKEG 798

[Close]
BLAST of Carg06904 vs. TAIR10
Match: AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 401.4 bits (1030), Expect = 1.2e-111
Identity = 227/708 (32.06%), Postives = 373/708 (52.68%), Query Frame = 0 

Query: 30  IKHQTKLKNDHAILSTYTQMESLVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGT 89
           ++   KL N    L      +  V L+  C        G +++   L + +  +   +G 
Sbjct: 75  LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL-SSMSSLGVELGN 134

Query: 90  ALIGFYMRFDAAV-SHRVFSSMEVRNVVSWNAMITGYLNIGDYTKALKLFSSML-TEGIK 149
           A +  ++RF   V +  VF  M  RN+ SWN ++ GY   G + +A+ L+  ML   G+K
Sbjct: 135 AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVK 194

Query: 150 FDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNALLNMYSDNGRLESSCAL 209
            D  T   V++ C     L  G ++H   +++ +  D+ V+NAL+ MY   G ++S+  L
Sbjct: 195 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 254

Query: 210 FNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDG 269
           F+ +P  D   WN+MIS Y   G   E + L+  MR   +  D  T+  ++S CE L D 
Sbjct: 255 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDR 314

Query: 270 SIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILA 329
            + GR +HA+ + +G  +D+ + N+L  MY+       A+KLF +M   D++S  TMI  
Sbjct: 315 RL-GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 374

Query: 330 LARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEIN 389
              +    KA + +  M +  +K +  T+ ++L+ C    DL  G  +H  AIK  L   
Sbjct: 375 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 434

Query: 390 TSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHMIS 449
             +  +L  MY  C+    A  +F   P++++ISW S+I+    N+   +AL+    M  
Sbjct: 435 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 494

Query: 450 ELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQ 509
            L+PN++T+ + L +C ++  L  G+ +HA+  R G    LD  L NA + MY RCG+M 
Sbjct: 495 TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVG--LDDFLPNALLDMYVRCGRMN 554

Query: 510 YAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACS 569
            A   F++ K +++ SWN ++TGY   G+G      F +M+    +P+ I+F+S+L  CS
Sbjct: 555 TAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 614

Query: 570 HSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIW 629
            S + + GL  FS M  D+G+ P L HY C+VDLLGR G   EA   I  MPV PD ++W
Sbjct: 615 KSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 674

Query: 630 RALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDK 689
            ALL++C++     L E   + + EL+  + G ++LL N+YA  G W EV+++R+ +++ 
Sbjct: 675 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKEN 734

Query: 690 GLVKPPGTSWIVIGSQVHYFTATDVSHPQSEEIYENLNSLTSLIQDMG 736
           GL    G SW+ +  +VH F + D  HPQ++EI   L      + ++G
Sbjct: 735 GLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVG 776

[Close]
BLAST of Carg06904 vs. TAIR10
Match: AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 401.4 bits (1030), Expect = 1.2e-111
Identity = 240/687 (34.93%), Postives = 382/687 (55.60%), Query Frame = 0 

Query: 57  LACAEMLELRL--GHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRN 116
           L  A+ L  RL    +I   C+   L ++  ++G          + A++   F  ++ R+
Sbjct: 67  LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLG----------NVALARHTFDHIQNRD 126

Query: 117 VVSWNAMITGYLNIGDYTKALKLFS-SMLTEGIKFDAVTMLLVIQACAESESLQLGMQLH 176
           V +WN MI+GY   G+ ++ ++ FS  ML+ G+  D  T   V++AC    ++  G ++H
Sbjct: 127 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIH 186

Query: 177 QLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHA 236
            LA+KF F+ D++V  +L+++YS    + ++  LF+ +P  D   WN+MIS Y   G   
Sbjct: 187 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 246

Query: 237 EAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRG--LHAHAMKSGMELDVFLGN 296
           EA+ L   +R      D  TV  +LS C +  D   + RG  +H++++K G+E ++F+ N
Sbjct: 247 EALTLSNGLR----AMDSVTVVSLLSACTEAGD---FNRGVTIHSYSIKHGLESELFVSN 306

Query: 297 ALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKF 356
            L+ +Y E  ++   QK+FD+M   D+IS N++I A   ++   +A  LF  M  S I+ 
Sbjct: 307 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 366

Query: 357 NSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEI-NTSLNTSLTEMYINCRDEGSATTL 416
           +  T+ISL ++     D+   RS+ GF ++ G  + + ++  ++  MY       SA  +
Sbjct: 367 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 426

Query: 417 FIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHM--ISELEPNSVTIISILTSCTQLAH 476
           F   P  D+ISWN++IS Y +N  A +A+ ++N M    E+  N  T +S+L +C+Q   
Sbjct: 427 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 486

Query: 477 LPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMI 536
           L  G  LH    + G    LD  +  +   MY +CG+++ A  +F  +   N V WN +I
Sbjct: 487 LRQGMKLHGRLLKNG--LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLI 546

Query: 537 TGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGI 596
             +G HG G  A + F +MLD+G KP++I+FV++LSACSHSGL   G   F  M  D+GI
Sbjct: 547 ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGI 606

Query: 597 APQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFR 656
            P L HYGC+VD+ GR G    A+  I SM ++PDASIW ALLS+C+V  N  L +    
Sbjct: 607 TPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASE 666

Query: 657 KLVELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFT 716
            L E+EP + G  VLLSN+YA+AG W  V +IR     KGL K PG S + + ++V  F 
Sbjct: 667 HLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFY 726

Query: 717 ATDVSHPQSEEIYENLNSLTSLIQDMG 736
             + +HP  EE+Y  L +L + ++ +G
Sbjct: 727 TGNQTHPMYEEMYRELTALQAKLKMIG 731

[Close]
BLAST of Carg06904 vs. TAIR10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 394.0 bits (1011), Expect = 2.0e-109
Identity = 218/683 (31.92%), Postives = 367/683 (53.73%), Query Frame = 0 

Query: 55  LLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVS-HRVFSSMEVR 114
           +L AC ++  L +G ++HG  L+ G F  D +V  AL+  Y      +S   +FS+M  R
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLG-FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 353

Query: 115 NVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLH 174
           + V++N +I G    G   KA++LF  M  +G++ D+ T+  ++ AC+   +L  G QLH
Sbjct: 354 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 413

Query: 175 QLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHA 234
               K  F  +  +  ALLN+Y+    +E++   F      +  LWN M+ AY       
Sbjct: 414 AYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLR 473

Query: 235 EAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNAL 294
            +  ++ +M++E +  ++ T   +L  C  L D  + G  +H+  +K+  +L+ ++ + L
Sbjct: 474 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL-GEQIHSQIIKTNFQLNAYVCSVL 533

Query: 295 LSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNS 354
           + MY +  ++D A  +  +  G DV+S  TMI    +  F  KA   F  M +  I+ + 
Sbjct: 534 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 593

Query: 355 YTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIR 414
             + + ++ C     L  G+ IH  A  +G   +     +L  +Y  C     +   F +
Sbjct: 594 VGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 653

Query: 415 CPQRDLISWNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIISILTSCTQLAHLPLG 474
               D I+WN+L+S + ++ N  +AL +F  M  E ++ N+ T  S + + ++ A++  G
Sbjct: 654 TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 713

Query: 475 QCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYG 534
           + +HA  T+ G  ++ +  + NA I+MYA+CG +  AEK F  +  +N VSWNA+I  Y 
Sbjct: 714 KQVHAVITKTG--YDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 773

Query: 535 MHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQL 594
            HG G +A  +F QM+    +PN+++ V VLSACSH GL   G+  F SM  ++G++P+ 
Sbjct: 774 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 833

Query: 595 AHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVE 654
            HY C+VD+L R G  + A   I  MP++PDA +WR LLS+C V  N ++ E     L+E
Sbjct: 834 EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 893

Query: 655 LEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFTATDV 714
           LEP +   +VLLSN+YA +  W      R+ +++KG+ K PG SWI + + +H F   D 
Sbjct: 894 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 953

Query: 715 SHPQSEEIYENLNSLTSLIQDMG 736
           +HP ++EI+E    LT    ++G
Sbjct: 954 NHPLADEIHEYFQDLTKRASEIG 972

[Close]
BLAST of Carg06904 vs. TAIR10
Match: AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 391.7 bits (1005), Expect = 9.7e-109
Identity = 220/688 (31.98%), Postives = 383/688 (55.67%), Query Frame = 0 

Query: 49  MESLVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMR-FDAAVSHRVF 108
           + S   LL ACA++ ++R G E+H   ++ G +     +  AL+  Y +  D + + R+F
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLG-YHSTGFIVNALVSMYAKNDDLSAARRLF 241

Query: 109 SSMEVR-NVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESL 168
              + + + V WN++++ Y   G   + L+LF  M   G   ++ T++  + AC      
Sbjct: 242 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 301

Query: 169 QLGMQLHQLAIKFN-FIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISA 228
           +LG ++H   +K +    +L+V NAL+ MY+  G++  +  +   +  +D   WNS+I  
Sbjct: 302 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 361

Query: 229 YIAFGFHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMEL 288
           Y+    + EA+  +  M   G K D+ ++  +++    L++  + G  LHA+ +K G + 
Sbjct: 362 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN-LLAGMELHAYVIKHGWDS 421

Query: 289 DVFLGNALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMC 348
           ++ +GN L+ MY + N      + F +M   D+IS  T+I   A++    +A ELF  + 
Sbjct: 422 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 481

Query: 349 ESEIKFNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEG 408
           +  ++ +   + S+L        ++  + IH   ++ GL ++T +   L ++Y  CR+ G
Sbjct: 482 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMG 541

Query: 409 SATTLFIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHMI-SELEPNSVTIISILTSCT 468
            AT +F     +D++SW S+ISS   N N  +A+ LF  M+ + L  +SV ++ IL++  
Sbjct: 542 YATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 601

Query: 469 QLAHLPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSW 528
            L+ L  G+ +H Y  R+G  F L+ S+A A + MYA CG +Q A+ +F  ++ + ++ +
Sbjct: 602 SLSALNKGREIHCYLLRKG--FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQY 661

Query: 529 NAMITGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVR 588
            +MI  YGMHG G  A   F +M  +   P++ISF+++L ACSH+GL   G      M  
Sbjct: 662 TSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEH 721

Query: 589 DFGIAPQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVE 648
           ++ + P   HY C+VD+LGR     EA   +  M  EP A +W ALL++C+  S K++ E
Sbjct: 722 EYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGE 781

Query: 649 TIFRKLVELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQV 708
              ++L+ELEP NPGN VL+SN++A  G W++V ++R  ++  G+ K PG SWI +  +V
Sbjct: 782 IAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKV 841

Query: 709 HYFTATDVSHPQSEEIYENLNSLTSLIQ 733
           H FTA D SHP+S+EIYE L+ +T  ++
Sbjct: 842 HKFTARDKSHPESKEIYEKLSEVTRKLE 864

[Close]
BLAST of Carg06904 vs. Swiss-Prot
Match: sp|Q7Y211|PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 414.8 bits (1065), Expect = 1.9e-114
Identity = 239/743 (32.17%), Postives = 410/743 (55.18%), Query Frame = 0 

Query: 12  RSPTPKQAIIVSKDWNLIIKHQTKLKNDHAILSTYTQMESLVPLLLACAEMLELRLGHEI 71
           RSP     ++ SK  + +++       D  +L       +   LL A A++ ++ LG +I
Sbjct: 60  RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119

Query: 72  HGYCLRNGLFDMDAHVGTALIGFYMRF-DAAVSHRVFSSMEVRNVVSWNAMITGYLNIGD 131
           H +  + G       V   L+  Y +  D    ++VF  +  RN VSWN++I+   +   
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179

Query: 132 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAE---SESLQLGMQLHQLAIKFNFIGDLFV 191
           +  AL+ F  ML E ++  + T++ V+ AC+     E L +G Q+H   ++   +   F+
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FI 239

Query: 192 LNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGL 251
           +N L+ MY   G+L SS  L  +    D   WN+++S+        EA+    +M LEG+
Sbjct: 240 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 299

Query: 252 KEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSG-MELDVFLGNALLSMYVEHNQIDAA 311
           + D+ T+  +L  C  L +    G+ LHA+A+K+G ++ + F+G+AL+ MY    Q+ + 
Sbjct: 300 EPDEFTISSVLPACSHL-EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 359

Query: 312 QKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESE-IKFNSYTMISLLALCKD 371
           +++FD M    +   N MI   ++++   +A  LF+ M ES  +  NS TM  ++  C  
Sbjct: 360 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 419

Query: 372 GSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSL 431
                   +IHGF +K GL+ +  +  +L +MY        A  +F +   RDL++WN++
Sbjct: 420 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 479

Query: 432 ISSYIKNDNAGKALLLFNHMIS------------ELEPNSVTIISILTSCTQLAHLPLGQ 491
           I+ Y+ +++   ALLL + M +             L+PNS+T+++IL SC  L+ L  G+
Sbjct: 480 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 539

Query: 492 CLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGM 551
            +HAY  +   +   D ++ +A + MYA+CG +Q + K+F  +  +N+++WN +I  YGM
Sbjct: 540 EIHAYAIK--NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 599

Query: 552 HGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLA 611
           HG G +A      M+  G KPN ++F+SV +ACSHSG+   GL++F  M  D+G+ P   
Sbjct: 600 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 659

Query: 612 HYGCIVDLLGRGGHFAEAIALISSMPVE-PDASIWRALLSSCQVKSNKKLVETIFRKLVE 671
           HY C+VDLLGR G   EA  L++ MP +   A  W +LL + ++ +N ++ E   + L++
Sbjct: 660 HYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ 719

Query: 672 LEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFTATDV 731
           LEP+   ++VLL+NIY++AGLW + +++R+ ++++G+ K PG SWI  G +VH F A D 
Sbjct: 720 LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDS 779

Query: 732 SHPQSEEIYENLNSLTSLIQDMG 736
           SHPQSE++   L +L   ++  G
Sbjct: 780 SHPQSEKLSGYLETLWERMRKEG 798

[Close]
BLAST of Carg06904 vs. Swiss-Prot
Match: sp|O81767|PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 401.4 bits (1030), Expect = 2.2e-110
Identity = 240/687 (34.93%), Postives = 382/687 (55.60%), Query Frame = 0 

Query: 57  LACAEMLELRL--GHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRN 116
           L  A+ L  RL    +I   C+   L ++  ++G          + A++   F  ++ R+
Sbjct: 67  LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLG----------NVALARHTFDHIQNRD 126

Query: 117 VVSWNAMITGYLNIGDYTKALKLFS-SMLTEGIKFDAVTMLLVIQACAESESLQLGMQLH 176
           V +WN MI+GY   G+ ++ ++ FS  ML+ G+  D  T   V++AC    ++  G ++H
Sbjct: 127 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIH 186

Query: 177 QLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHA 236
            LA+KF F+ D++V  +L+++YS    + ++  LF+ +P  D   WN+MIS Y   G   
Sbjct: 187 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 246

Query: 237 EAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRG--LHAHAMKSGMELDVFLGN 296
           EA+ L   +R      D  TV  +LS C +  D   + RG  +H++++K G+E ++F+ N
Sbjct: 247 EALTLSNGLR----AMDSVTVVSLLSACTEAGD---FNRGVTIHSYSIKHGLESELFVSN 306

Query: 297 ALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKF 356
            L+ +Y E  ++   QK+FD+M   D+IS N++I A   ++   +A  LF  M  S I+ 
Sbjct: 307 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 366

Query: 357 NSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEI-NTSLNTSLTEMYINCRDEGSATTL 416
           +  T+ISL ++     D+   RS+ GF ++ G  + + ++  ++  MY       SA  +
Sbjct: 367 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 426

Query: 417 FIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHM--ISELEPNSVTIISILTSCTQLAH 476
           F   P  D+ISWN++IS Y +N  A +A+ ++N M    E+  N  T +S+L +C+Q   
Sbjct: 427 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 486

Query: 477 LPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMI 536
           L  G  LH    + G    LD  +  +   MY +CG+++ A  +F  +   N V WN +I
Sbjct: 487 LRQGMKLHGRLLKNG--LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLI 546

Query: 537 TGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGI 596
             +G HG G  A + F +MLD+G KP++I+FV++LSACSHSGL   G   F  M  D+GI
Sbjct: 547 ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGI 606

Query: 597 APQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFR 656
            P L HYGC+VD+ GR G    A+  I SM ++PDASIW ALLS+C+V  N  L +    
Sbjct: 607 TPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASE 666

Query: 657 KLVELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFT 716
            L E+EP + G  VLLSN+YA+AG W  V +IR     KGL K PG S + + ++V  F 
Sbjct: 667 HLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFY 726

Query: 717 ATDVSHPQSEEIYENLNSLTSLIQDMG 736
             + +HP  EE+Y  L +L + ++ +G
Sbjct: 727 TGNQTHPMYEEMYRELTALQAKLKMIG 731

[Close]
BLAST of Carg06904 vs. Swiss-Prot
Match: sp|Q9M9E2|PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.2e-110
Identity = 227/708 (32.06%), Postives = 373/708 (52.68%), Query Frame = 0 

Query: 30  IKHQTKLKNDHAILSTYTQMESLVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGT 89
           ++   KL N    L      +  V L+  C        G +++   L + +  +   +G 
Sbjct: 75  LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL-SSMSSLGVELGN 134

Query: 90  ALIGFYMRFDAAV-SHRVFSSMEVRNVVSWNAMITGYLNIGDYTKALKLFSSML-TEGIK 149
           A +  ++RF   V +  VF  M  RN+ SWN ++ GY   G + +A+ L+  ML   G+K
Sbjct: 135 AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVK 194

Query: 150 FDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNALLNMYSDNGRLESSCAL 209
            D  T   V++ C     L  G ++H   +++ +  D+ V+NAL+ MY   G ++S+  L
Sbjct: 195 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 254

Query: 210 FNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDG 269
           F+ +P  D   WN+MIS Y   G   E + L+  MR   +  D  T+  ++S CE L D 
Sbjct: 255 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDR 314

Query: 270 SIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILA 329
            + GR +HA+ + +G  +D+ + N+L  MY+       A+KLF +M   D++S  TMI  
Sbjct: 315 RL-GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 374

Query: 330 LARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEIN 389
              +    KA + +  M +  +K +  T+ ++L+ C    DL  G  +H  AIK  L   
Sbjct: 375 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 434

Query: 390 TSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHMIS 449
             +  +L  MY  C+    A  +F   P++++ISW S+I+    N+   +AL+    M  
Sbjct: 435 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 494

Query: 450 ELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQ 509
            L+PN++T+ + L +C ++  L  G+ +HA+  R G    LD  L NA + MY RCG+M 
Sbjct: 495 TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVG--LDDFLPNALLDMYVRCGRMN 554

Query: 510 YAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACS 569
            A   F++ K +++ SWN ++TGY   G+G      F +M+    +P+ I+F+S+L  CS
Sbjct: 555 TAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 614

Query: 570 HSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIW 629
            S + + GL  FS M  D+G+ P L HY C+VDLLGR G   EA   I  MPV PD ++W
Sbjct: 615 KSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 674

Query: 630 RALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDK 689
            ALL++C++     L E   + + EL+  + G ++LL N+YA  G W EV+++R+ +++ 
Sbjct: 675 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKEN 734

Query: 690 GLVKPPGTSWIVIGSQVHYFTATDVSHPQSEEIYENLNSLTSLIQDMG 736
           GL    G SW+ +  +VH F + D  HPQ++EI   L      + ++G
Sbjct: 735 GLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVG 776

[Close]
BLAST of Carg06904 vs. Swiss-Prot
Match: sp|Q9SVP7|PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 394.0 bits (1011), Expect = 3.5e-108
Identity = 218/683 (31.92%), Postives = 367/683 (53.73%), Query Frame = 0 

Query: 55  LLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVS-HRVFSSMEVR 114
           +L AC ++  L +G ++HG  L+ G F  D +V  AL+  Y      +S   +FS+M  R
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLG-FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 353

Query: 115 NVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLH 174
           + V++N +I G    G   KA++LF  M  +G++ D+ T+  ++ AC+   +L  G QLH
Sbjct: 354 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 413

Query: 175 QLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHA 234
               K  F  +  +  ALLN+Y+    +E++   F      +  LWN M+ AY       
Sbjct: 414 AYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLR 473

Query: 235 EAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNAL 294
            +  ++ +M++E +  ++ T   +L  C  L D  + G  +H+  +K+  +L+ ++ + L
Sbjct: 474 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL-GEQIHSQIIKTNFQLNAYVCSVL 533

Query: 295 LSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNS 354
           + MY +  ++D A  +  +  G DV+S  TMI    +  F  KA   F  M +  I+ + 
Sbjct: 534 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 593

Query: 355 YTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIR 414
             + + ++ C     L  G+ IH  A  +G   +     +L  +Y  C     +   F +
Sbjct: 594 VGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 653

Query: 415 CPQRDLISWNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIISILTSCTQLAHLPLG 474
               D I+WN+L+S + ++ N  +AL +F  M  E ++ N+ T  S + + ++ A++  G
Sbjct: 654 TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 713

Query: 475 QCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYG 534
           + +HA  T+ G  ++ +  + NA I+MYA+CG +  AEK F  +  +N VSWNA+I  Y 
Sbjct: 714 KQVHAVITKTG--YDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 773

Query: 535 MHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQL 594
            HG G +A  +F QM+    +PN+++ V VLSACSH GL   G+  F SM  ++G++P+ 
Sbjct: 774 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 833

Query: 595 AHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVE 654
            HY C+VD+L R G  + A   I  MP++PDA +WR LLS+C V  N ++ E     L+E
Sbjct: 834 EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 893

Query: 655 LEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFTATDV 714
           LEP +   +VLLSN+YA +  W      R+ +++KG+ K PG SWI + + +H F   D 
Sbjct: 894 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 953

Query: 715 SHPQSEEIYENLNSLTSLIQDMG 736
           +HP ++EI+E    LT    ++G
Sbjct: 954 NHPLADEIHEYFQDLTKRASEIG 972

[Close]
BLAST of Carg06904 vs. Swiss-Prot
Match: sp|Q9M1V3|PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 391.7 bits (1005), Expect = 1.8e-107
Identity = 220/688 (31.98%), Postives = 383/688 (55.67%), Query Frame = 0 

Query: 49  MESLVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMR-FDAAVSHRVF 108
           + S   LL ACA++ ++R G E+H   ++ G +     +  AL+  Y +  D + + R+F
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLG-YHSTGFIVNALVSMYAKNDDLSAARRLF 241

Query: 109 SSMEVR-NVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESL 168
              + + + V WN++++ Y   G   + L+LF  M   G   ++ T++  + AC      
Sbjct: 242 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 301

Query: 169 QLGMQLHQLAIKFN-FIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISA 228
           +LG ++H   +K +    +L+V NAL+ MY+  G++  +  +   +  +D   WNS+I  
Sbjct: 302 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 361

Query: 229 YIAFGFHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMEL 288
           Y+    + EA+  +  M   G K D+ ++  +++    L++  + G  LHA+ +K G + 
Sbjct: 362 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN-LLAGMELHAYVIKHGWDS 421

Query: 289 DVFLGNALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMC 348
           ++ +GN L+ MY + N      + F +M   D+IS  T+I   A++    +A ELF  + 
Sbjct: 422 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 481

Query: 349 ESEIKFNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEG 408
           +  ++ +   + S+L        ++  + IH   ++ GL ++T +   L ++Y  CR+ G
Sbjct: 482 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMG 541

Query: 409 SATTLFIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHMI-SELEPNSVTIISILTSCT 468
            AT +F     +D++SW S+ISS   N N  +A+ LF  M+ + L  +SV ++ IL++  
Sbjct: 542 YATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 601

Query: 469 QLAHLPLGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSW 528
            L+ L  G+ +H Y  R+G  F L+ S+A A + MYA CG +Q A+ +F  ++ + ++ +
Sbjct: 602 SLSALNKGREIHCYLLRKG--FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQY 661

Query: 529 NAMITGYGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVR 588
            +MI  YGMHG G  A   F +M  +   P++ISF+++L ACSH+GL   G      M  
Sbjct: 662 TSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEH 721

Query: 589 DFGIAPQLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVE 648
           ++ + P   HY C+VD+LGR     EA   +  M  EP A +W ALL++C+  S K++ E
Sbjct: 722 EYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGE 781

Query: 649 TIFRKLVELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQV 708
              ++L+ELEP NPGN VL+SN++A  G W++V ++R  ++  G+ K PG SWI +  +V
Sbjct: 782 IAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKV 841

Query: 709 HYFTATDVSHPQSEEIYENLNSLTSLIQ 733
           H FTA D SHP+S+EIYE L+ +T  ++
Sbjct: 842 HKFTARDKSHPESKEIYEKLSEVTRKLE 864

[Close]
BLAST of Carg06904 vs. TrEMBL
Match: tr|A0A1S3BNK9|A0A1S3BNK9_CUCME (pentatricopeptide repeat-containing protein At2g13600-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491511 PE=4 SV=1)

HSP 1 Score: 1219.9 bits (3155), Expect = 0.0e+00
Identity = 631/847 (74.50%), Postives = 676/847 (79.81%), Query Frame = 0 

Query: 1   MEISATLSIHGRSPTPKQA--IIVSKDWNLIIKHQTKLKNDHAILSTYTQMESL------ 60
           MEI+  LS HG S TPKQ   I VSKDWN IIKH TKLKNDHAILSTYTQMESL      
Sbjct: 1   MEIAVNLSYHGLSSTPKQTHLINVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDS 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  ATMPLVLKACGRLNAIDKGVRIHSCIRGSDLINDVRVGTALVDFYCKCGLVAEASKVFVE 120

Query: 121 --------------------------------------------VPLLLACAEMLELRLG 180
                                                       V LLLAC EMLELRLG
Sbjct: 121 MPERDLVSWNALISGXXXXXXXXXXXXXXXXXKKAGLTPNSRTVVALLLACGEMLELRLG 180

Query: 181 HEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNI 240
            EIHGYCLRNGLFDMDA+VGTAL+GFY+RFDA +SHRVFS M VRN+VSWNA+ITG+LN+
Sbjct: 181 QEIHGYCLRNGLFDMDAYVGTALVGFYLRFDAVLSHRVFSLMVVRNIVSWNAIITGFLNV 240

Query: 241 GDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVL 300
           GDYTKALKLFSSML EGIKFDAVTML+VIQACAE   L+LGMQLHQLAIKFN I D+FVL
Sbjct: 241 GDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDVFVL 300

Query: 301 NALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLK 360
           NALLNMYSDNG LESSC LFNAVPTSDAALWNSMIS YI FGFHAEAIAL+IKMRLE +K
Sbjct: 301 NALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFGFHAEAIALFIKMRLERIK 360

Query: 361 EDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQK 420
           ED RT+ IMLSLC DLNDGS+WGRGLHAHAMKSG+ELD FLGNALLSMYV+HNQI+AAQ 
Sbjct: 361 EDVRTIVIMLSLCNDLNDGSLWGRGLHAHAMKSGIELDAFLGNALLSMYVKHNQINAAQN 420

Query: 421 LFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSD 480
           +F+K RGLDVIS NTMI ALA+S FRAKAFELF  MCESEIKFNSYT+ISLLALCKDG+D
Sbjct: 421 VFEKTRGLDVISWNTMISALAQSMFRAKAFELFFMMCESEIKFNSYTIISLLALCKDGND 480

Query: 481 LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISS 540
           LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINC DE +A  +F RCPQRDLISWNSLI S
Sbjct: 481 LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAIDMFTRCPQRDLISWNSLILS 540

Query: 541 YIKNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFEL 600
           YIKNDNAGKALLLFNHMISELEPNSVTII+ILTSCTQLAHLPLGQCLHAY TRR ES E+
Sbjct: 541 YIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHLPLGQCLHAYATRREESLEM 600

Query: 601 DASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQML 660
           DASLANAFITMYARCGKMQYAE+IF TL+ RNIVSWNAMITGYGMHGRG DATLAFAQML
Sbjct: 601 DASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMITGYGMHGRGRDATLAFAQML 660

Query: 661 DDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHF 720
           DDGFKPNN+SF SVLSACSHSGLT+TGL LF SMVRDFG+APQL HYGC+VDLLGRGGHF
Sbjct: 661 DDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLAPQLTHYGCMVDLLGRGGHF 720

Query: 721 AEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIY 736
           +EAIA I++MP+EPDASIWRALLSS Q+KSNKKL+ETIF KLVELEPSNPGNF+LLSNIY
Sbjct: 721 SEAIAFINTMPIEPDASIWRALLSSWQIKSNKKLLETIFGKLVELEPSNPGNFILLSNIY 780

[Close]
BLAST of Carg06904 vs. TrEMBL
Match: tr|A0A1S4DXL9|A0A1S4DXL9_CUCME (pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491511 PE=4 SV=1)

HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 589/685 (85.99%), Postives = 635/685 (92.70%), Query Frame = 0 

Query: 51  SLVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSM 110
           ++V LLLAC EMLELRLG EIHGYCLRNGLFDMDA+VGTAL+GFY+RFDA +SHRVFS M
Sbjct: 43  TVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYLRFDAVLSHRVFSLM 102

Query: 111 EVRNVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGM 170
            VRN+VSWNA+ITG+LN+GDYTKALKLFSSML EGIKFDAVTML+VIQACAE   L+LGM
Sbjct: 103 VVRNIVSWNAIITGFLNVGDYTKALKLFSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGM 162

Query: 171 QLHQLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFG 230
           QLHQLAIKFN I D+FVLNALLNMYSDNG LESSC LFNAVPTSDAALWNSMIS YI FG
Sbjct: 163 QLHQLAIKFNLINDVFVLNALLNMYSDNGSLESSCVLFNAVPTSDAALWNSMISCYIGFG 222

Query: 231 FHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLG 290
           FHAEAIAL+IKMRLE +KED RT+ IMLSLC DLNDGS+WGRGLHAHAMKSG+ELD FLG
Sbjct: 223 FHAEAIALFIKMRLERIKEDVRTIVIMLSLCNDLNDGSLWGRGLHAHAMKSGIELDAFLG 282

Query: 291 NALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIK 350
           NALLSMYV+HNQI+AAQ +F+K RGLDVIS NTMI ALA+S FRAKAFELF  MCESEIK
Sbjct: 283 NALLSMYVKHNQINAAQNVFEKTRGLDVISWNTMISALAQSMFRAKAFELFFMMCESEIK 342

Query: 351 FNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTL 410
           FNSYT+ISLLALCKDG+DLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINC DE +A  +
Sbjct: 343 FNSYTIISLLALCKDGNDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAIDM 402

Query: 411 FIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLP 470
           F RCPQRDLISWNSLI SYIKNDNAGKALLLFNHMISELEPNSVTII+ILTSCTQLAHLP
Sbjct: 403 FTRCPQRDLISWNSLILSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHLP 462

Query: 471 LGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITG 530
           LGQCLHAY TRR ES E+DASLANAFITMYARCGKMQYAE+IF TL+ RNIVSWNAMITG
Sbjct: 463 LGQCLHAYATRREESLEMDASLANAFITMYARCGKMQYAEQIFRTLQTRNIVSWNAMITG 522

Query: 531 YGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAP 590
           YGMHGRG DATLAFAQMLDDGFKPNN+SF SVLSACSHSGLT+TGL LF SMVRDFG+AP
Sbjct: 523 YGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTETGLLLFHSMVRDFGLAP 582

Query: 591 QLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKL 650
           QL HYGC+VDLLGRGGHF+EAIA I++MP+EPDASIWRALLSS Q+KSNKKL+ETIF KL
Sbjct: 583 QLTHYGCMVDLLGRGGHFSEAIAFINTMPIEPDASIWRALLSSWQIKSNKKLLETIFGKL 642

Query: 651 VELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFTAT 710
           VELEPSNPGNF+LLSNIYAAAGLWSEV QIRKWLR++GL KPPGTSWIVIG+QVHYFTAT
Sbjct: 643 VELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWIVIGNQVHYFTAT 702

Query: 711 DVSHPQSEEIYENLNSLTSLIQDMG 736
           DV HPQSE+IYENLNSLTSLIQDMG
Sbjct: 703 DVLHPQSEKIYENLNSLTSLIQDMG 727

[Close]
BLAST of Carg06904 vs. TrEMBL
Match: tr|A0A2N9IVN7|A0A2N9IVN7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56003 PE=4 SV=1)

HSP 1 Score: 921.0 bits (2379), Expect = 1.7e-264
Identity = 474/848 (55.90%), Postives = 584/848 (68.87%), Query Frame = 0 

Query: 3   ISATLSIHGRS--PTPKQAIIVS---KDWNLIIKHQTKLKNDHAILSTYTQMESL----- 62
           +S TLS+  +     P+Q +I +   K WN IIKH TKLK+DHAIL+TYTQM SL     
Sbjct: 8   VSVTLSLQNQKVPSIPRQGLIKNPPKKQWNSIIKHHTKLKDDHAILTTYTQMASLGLAPD 67

Query: 63  ------------------------------------------------------------ 122
                                                                       
Sbjct: 68  NATLPLVLKACARLNAIESGKTIHFSILGTSLIQDVRVRTALVDFYCKCGLIEEARKVFD 127

Query: 123 ---------------------------------------------VPLLLACAEMLELRL 182
                                                        V LLLA  E+LELR+
Sbjct: 128 EMCERDVVSWNALISGYVGCCYHEEAVFLFREMEREGFKPNSRTVVALLLASEEVLELRI 187

Query: 183 GHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLN 242
           G EIHGYCLRNGLFD+D HVGTALIGFY+RFD  +S  VF  M VR++VSWNAMITGY++
Sbjct: 188 GQEIHGYCLRNGLFDLDPHVGTALIGFYLRFDVRISRLVFDLMVVRSIVSWNAMITGYVD 247

Query: 243 IGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFV 302
           +G+Y +ALKLF SML  G+ FD+VTML+VIQAC E  SLQLGMQ+HQ+AIK  ++GDL++
Sbjct: 248 VGNYLEALKLFMSMLENGVPFDSVTMLVVIQACVEFGSLQLGMQIHQMAIKLKYVGDLYI 307

Query: 303 LNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGL 362
           +NALLNMYS+NG L SSCALF+ +P  D ALWNSMISAYI FG + EA+ L+I MR EG+
Sbjct: 308 VNALLNMYSENGSLASSCALFDTIPACDVALWNSMISAYIGFGCYEEALRLFISMRTEGI 367

Query: 363 KEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQ 422
           KED+RT+ I+LS C    DG   G+ LHAHA KS M++D+ LGNALLSMY + N ++A Q
Sbjct: 368 KEDERTIAIILSSCAKFTDGLRKGKSLHAHATKSRMKIDISLGNALLSMYADLNCVEAVQ 427

Query: 423 KLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGS 482
           K+F ++R LD++S NT+ILALA ++ R +A++LF  M ESE K NSYT+IS+LA C+D +
Sbjct: 428 KVFAELRSLDIVSWNTLILALAHNRMRIEAWKLFGVMRESEFKPNSYTIISILATCEDET 487

Query: 483 DLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLIS 542
            L  GRSIHGF +K+G+E+N SLNT+LT+MY+NC DE SA  LF  CP RDLISWNS+I+
Sbjct: 488 CLNVGRSIHGFVVKHGIEVNLSLNTTLTDMYMNCGDEASARILFEGCPNRDLISWNSMIA 547

Query: 543 SYIKNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFE 602
           +YI ++   +ALLLFN MI E+EPNSVTII++L+SCT LA+LP GQCLHAY  RR     
Sbjct: 548 NYINDNQVREALLLFNRMIQEVEPNSVTIINVLSSCTDLANLPQGQCLHAYVIRRHSYLS 607

Query: 603 LDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQM 662
            + SLANAFITMYARCG MQ AEKIF TL  RNI+SWNAMITGY MHGRG DA LAF QM
Sbjct: 608 FNLSLANAFITMYARCGSMQKAEKIFKTLPRRNIISWNAMITGYRMHGRGDDAILAFLQM 667

Query: 663 LDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGH 722
           L++G++PN ++F+SV+SACSHSGL + GL+LF SMV+DF I P+L HYGC+VDLLGRGG 
Sbjct: 668 LEEGYQPNGVTFLSVISACSHSGLIEKGLELFHSMVKDFKITPELVHYGCVVDLLGRGGR 727

Query: 723 FAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNI 736
             EA   I SMP+EPDAS+WRALLSSC+V ++ KL E IF KLVELEP NPGN+VLLSNI
Sbjct: 728 LDEAREFIQSMPIEPDASVWRALLSSCRVNNDTKLAENIFEKLVELEPMNPGNYVLLSNI 787

[Close]
BLAST of Carg06904 vs. TrEMBL
Match: tr|A0A2I4FH18|A0A2I4FH18_9ROSI (putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic isoform X1 OS=Juglans regia OX=51240 GN=LOC108998716 PE=4 SV=1)

HSP 1 Score: 884.4 bits (2284), Expect = 1.7e-253
Identity = 465/845 (55.03%), Postives = 570/845 (67.46%), Query Frame = 0 

Query: 1   MEISATLSIHGRSPTPKQAIIVSKDWNLIIKHQTKLKNDHAILSTYTQMES--------- 60
           ME+  TLSI     TPK+     K+WN IIKH+TKLK+D +IL+TYTQM S         
Sbjct: 1   MELPVTLSIREVPLTPKRN--HPKEWNSIIKHRTKLKDDLSILTTYTQMASRGIAADSDT 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LPLVLKACSRLNAVESGKSIHSSIRGTILIRDVRVGTALVDFYCKCGLIEEARKVFDEMG 120

Query: 121 -----------------------------------------LVPLLLACAEMLELRLGHE 180
                                                    +V LLLAC E+LEL+LG E
Sbjct: 121 EKDVVSWXXXXXXXXXXXXXXXXXXXXXXXEREGFRPNSRTVVALLLACEEVLELKLGQE 180

Query: 181 IHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSMEVRNVVSWNAMITGYLNIGD 240
           +HGYCLRNGL D++ HVGTALIGFY+RFDA +S  VF  M VR++VSWNAMI GY+++GD
Sbjct: 181 MHGYCLRNGLLDLNPHVGTALIGFYLRFDARISRLVFDLMVVRSIVSWNAMINGYVDVGD 240

Query: 241 YTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGMQLHQLAIKFNFIGDLFVLNA 300
           Y +ALKLF SML +G+ FD+VT L  IQACAE   L LG QLHQ+AIK  +  DL+V+NA
Sbjct: 241 YLEALKLFLSMLMDGVHFDSVTTLGCIQACAELGYLGLGTQLHQMAIKLKYANDLYVINA 300

Query: 301 LLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFGFHAEAIALYIKMRLEGLKED 360
           LL MYS+NG L+S+  LF   P  D ALWNSMISAYI FG   EA++L+  MR +G+KED
Sbjct: 301 LLTMYSENGSLDSAYKLFGGTPARDVALWNSMISAYINFGDFEEALSLFSSMRTKGIKED 360

Query: 361 KRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLGNALLSMYVEHNQIDAAQKLF 420
           +RT+  +LS C  L DG   G+ LHAHA KSGM++DV LGNALLSMY E N ++A QK+F
Sbjct: 361 ERTIVTVLSSCSKLADGLRKGKSLHAHATKSGMKMDVSLGNALLSMYAELNCVEAVQKVF 420

Query: 421 DKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIKFNSYTMISLLALCKDGSDLV 480
            K+R  D+IS NT+ILALA +K R++A++LF  M ESE K N YT+IS+LA C D + L 
Sbjct: 421 AKLRDSDIISWNTVILALAHNKMRSEAWKLFGLMRESEFKPNPYTIISILATCDDETCLN 480

Query: 481 FGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTLFIRCPQRDLISWNSLISSYI 540
            GRSIHGF +K+ +EIN SLNT+LT+MY+   DE SA TLF  CP+RDLISWN++I+ YI
Sbjct: 481 IGRSIHGFVVKHAIEINLSLNTALTDMYMKSGDEASARTLFDCCPKRDLISWNAMITGYI 540

Query: 541 KNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLPLGQCLHAYTTRRGESFELDA 600
            ++ A KAL LFNHMI E+EPNSVTI+S+L+SCT LA+LP G+CLHAY TRR   F  + 
Sbjct: 541 NDNQAIKALYLFNHMILEVEPNSVTIMSVLSSCTDLANLPQGKCLHAYATRRDSYFGFNL 600

Query: 601 SLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITGYGMHGRGHDATLAFAQMLDD 660
           SLANAFI MYARCG MQ A+ IF TL  RNI++WNAMI GY MHGRG+DA  +F QML+D
Sbjct: 601 SLANAFIMMYARCGSMQSAKNIFETLPRRNIIAWNAMINGYRMHGRGYDAIHSFLQMLED 660

Query: 661 GFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAPQLAHYGCIVDLLGRGGHFAE 720
           G+ PN  +F+SV+SACSHSG  + GL+LF SMV+DF I P+L HYGC+VDLLGRGG   E
Sbjct: 661 GYTPNGATFLSVISACSHSGFIEKGLELFHSMVQDFKIEPELVHYGCVVDLLGRGGRLDE 720

Query: 721 AIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKLVELEPSNPGNFVLLSNIYAA 736
           A   I SMP++PDAS+WRALLS+C+V S+ KL E IF KL+ELEP NPGN++LLSNIYAA
Sbjct: 721 AREFIESMPIKPDASVWRALLSACRVNSDIKLAENIFEKLIELEPMNPGNYILLSNIYAA 780

[Close]
BLAST of Carg06904 vs. TrEMBL
Match: tr|A0A061GS93|A0A061GS93_THECC (Pentatricopeptide repeat-containing protein OS=Theobroma cacao OX=3641 GN=TCM_040700 PE=4 SV=1)

HSP 1 Score: 857.8 bits (2215), Expect = 1.7e-245
Identity = 421/685 (61.46%), Postives = 528/685 (77.08%), Query Frame = 0 

Query: 51  SLVPLLLACAEMLELRLGHEIHGYCLRNGLFDMDAHVGTALIGFYMRFDAAVSHRVFSSM 110
           +LV +LLAC E+ E+RLG EIHGYCLRNGLFD+D HVGTALIGFY+ F+   SH VF  M
Sbjct: 161 TLVAMLLACQEVAEVRLGKEIHGYCLRNGLFDLDPHVGTALIGFYLSFNVRASHTVFDLM 220

Query: 111 EVRNVVSWNAMITGYLNIGDYTKALKLFSSMLTEGIKFDAVTMLLVIQACAESESLQLGM 170
            VRN V WNAMI GY +IG+  KALKLF  ML +G++FD+VTML +IQACAE  SL+LG 
Sbjct: 221 AVRNTVCWNAMIKGYFDIGESLKALKLFEKMLMDGVEFDSVTMLALIQACAEFGSLELGS 280

Query: 171 QLHQLAIKFNFIGDLFVLNALLNMYSDNGRLESSCALFNAVPTSDAALWNSMISAYIAFG 230
           Q+HQ+AIK ++  DLF++NALLNMY+D G L+S+C LF+  P  D ALWNSMISAY  + 
Sbjct: 281 QIHQMAIKCSYSNDLFIVNALLNMYADIGSLKSACKLFDVTPRRDVALWNSMISAYFEYS 340

Query: 231 FHAEAIALYIKMRLEGLKEDKRTVEIMLSLCEDLNDGSIWGRGLHAHAMKSGMELDVFLG 290
            + EA +L++ MR EG KED RT+ IM SLC +  DG   G+ LHA+A KSGM +DV LG
Sbjct: 341 CNEEATSLFVHMRTEGNKEDDRTIVIMFSLCAESADGLRKGKSLHAYASKSGMRMDVNLG 400

Query: 291 NALLSMYVEHNQIDAAQKLFDKMRGLDVISCNTMILALARSKFRAKAFELFMTMCESEIK 350
           NA+L+MY + N ID+ QK+F +M  +DVIS NT+ILALAR+K  ++A+E+F  M E +++
Sbjct: 401 NAMLNMYAQQNCIDSVQKVFSEMSNVDVISFNTVILALARNKLGSEAWEVFGLMWELDVE 460

Query: 351 FNSYTMISLLALCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCRDEGSATTL 410
            NSYT+IS+LA CKD + L  GRS+HGF IK G+E+N SLNT+LT+MYINC DE +A  L
Sbjct: 461 PNSYTIISILAACKDETCLNIGRSLHGFVIKQGIEVNVSLNTALTDMYINCGDEATARNL 520

Query: 411 FIRCPQRDLISWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIISILTSCTQLAHLP 470
           F  CP RDLISWN+LI++Y+KN+ A +A L+F+ MISE+EPNSVTII+IL+SCT LAHLP
Sbjct: 521 FESCPGRDLISWNALIATYVKNNLAHEAFLVFSRMISEVEPNSVTIINILSSCTHLAHLP 580

Query: 471 LGQCLHAYTTRRGESFELDASLANAFITMYARCGKMQYAEKIFSTLKARNIVSWNAMITG 530
            GQC HAY  R+  S   + SL NAFITMYARCG MQ AE+IF TL  RNI+SWNA+ITG
Sbjct: 581 QGQCFHAYMLRQESSLGHNLSLGNAFITMYARCGSMQSAERIFKTLPRRNIISWNAIITG 640

Query: 531 YGMHGRGHDATLAFAQMLDDGFKPNNISFVSVLSACSHSGLTKTGLQLFSSMVRDFGIAP 590
           YGMHGRG DA LAF+QML+DG+ PN ++F+SVLSACSHSG+ + GL+LF SMV DF I P
Sbjct: 641 YGMHGRGSDAILAFSQMLEDGYYPNEVTFISVLSACSHSGMIEEGLRLFDSMVHDFHITP 700

Query: 591 QLAHYGCIVDLLGRGGHFAEAIALISSMPVEPDASIWRALLSSCQVKSNKKLVETIFRKL 650
           QLAHYGC+VDLLGR G   EA   I SMP++PDAS+WRALLS+ +     K  + IF K+
Sbjct: 701 QLAHYGCVVDLLGRAGCLDEARGFIESMPIKPDASVWRALLSAYRDHCYTKEAKAIFEKI 760

Query: 651 VELEPSNPGNFVLLSNIYAAAGLWSEVSQIRKWLRDKGLVKPPGTSWIVIGSQVHYFTAT 710
           VEL+P NPGN+VL+ N YAAAGLWS+V QIR  L+ KGL KPPG SWIV+ SQ+H F A 
Sbjct: 761 VELDPMNPGNYVLVCNAYAAAGLWSDVRQIRTCLKAKGLRKPPGMSWIVVRSQIHSFAAG 820

Query: 711 DVSHPQSEEIYENLNSLTSLIQDMG 736
           D SHP +++IY NLNSL   ++++G
Sbjct: 821 DRSHPMADKIYANLNSLLHSMKEIG 845

The following BLAST results are available for this feature:
BLAST of Carg06904 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022944564.10.0e+0086.51pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Cucur... [more]
XP_023512048.10.0e+0085.33pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isofor... [more]
XP_022986695.10.0e+0084.85pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... [more]
XP_008449715.10.0e+0074.50PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like isoform X1... [more]
XP_004142223.10.0e+0073.91PREDICTED: putative pentatricopeptide repeat-containing protein At3g01580 [Cucum... [more]
BLAST of Carg06904 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G57430.11.1e-11532.17Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G15510.11.2e-11132.06Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G33990.11.2e-11134.93Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G13650.12.0e-10931.92Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G63370.19.7e-10931.98Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Carg06904 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q7Y211|PP285_ARATH1.9e-11432.17Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
sp|O81767|PP348_ARATH2.2e-11034.93Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX... [more]
sp|Q9M9E2|PPR45_ARATH2.2e-11032.06Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop... [more]
sp|Q9SVP7|PP307_ARATH3.5e-10831.92Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... [more]
sp|Q9M1V3|PP296_ARATH1.8e-10731.98Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... [more]
BLAST of Carg06904 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BNK9|A0A1S3BNK9_CUCME0.0e+0074.50pentatricopeptide repeat-containing protein At2g13600-like isoform X1 OS=Cucumis... [more]
tr|A0A1S4DXL9|A0A1S4DXL9_CUCME0.0e+0085.99pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isofor... [more]
tr|A0A2N9IVN7|A0A2N9IVN7_FAGSY1.7e-26455.90Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56003 PE=4 SV=1[more]
tr|A0A2I4FH18|A0A2I4FH18_9ROSI1.7e-25355.03putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic is... [more]
tr|A0A061GS93|A0A061GS93_THECC1.7e-24561.46Pentatricopeptide repeat-containing protein OS=Theobroma cacao OX=3641 GN=TCM_04... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06904-RACarg06904-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 116..149
e-value: 1.4E-7
score: 29.2
coord: 420..447
e-value: 8.7E-5
score: 20.5
coord: 522..555
e-value: 6.8E-7
score: 27.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 520..567
e-value: 8.6E-9
score: 35.4
coord: 317..364
e-value: 8.9E-8
score: 32.1
coord: 113..161
e-value: 7.3E-12
score: 45.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 420..447
e-value: 2.8E-5
score: 24.0
coord: 291..316
e-value: 0.0088
score: 16.1
coord: 219..247
e-value: 1.3E-4
score: 21.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 321..351
score: 5.24
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 215..249
score: 9.767
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 520..554
score: 11.301
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 657..691
score: 6.533
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 114..148
score: 11.575
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 418..448
score: 9.065
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 623..653
score: 5.229
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 149..183
score: 5.667
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 591..621
score: 5.985
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 489..519
score: 7.541
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 286..320
score: 8.747
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 184..214
score: 7.125
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 555..590
score: 8.342
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 471..571
e-value: 2.1E-20
score: 74.8
coord: 370..470
e-value: 1.4E-10
score: 42.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 219..369
e-value: 2.3E-24
score: 88.3
coord: 35..214
e-value: 1.6E-21
score: 79.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 572..723
e-value: 5.9E-12
score: 47.7
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 252..342
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 53..163
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 288..445
coord: 406..716
NoneNo IPR availablePANTHERPTHR24015:SF148SUBFAMILY NOT NAMEDcoord: 104..254
NoneNo IPR availablePANTHERPTHR24015:SF148SUBFAMILY NOT NAMEDcoord: 252..342
NoneNo IPR availablePANTHERPTHR24015:SF148SUBFAMILY NOT NAMEDcoord: 406..716
NoneNo IPR availablePANTHERPTHR24015:SF148SUBFAMILY NOT NAMEDcoord: 288..445
coord: 53..163
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 104..254

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg06904Cla008547Watermelon (97103) v1carwmB0520
Carg06904Csa4G291910Cucumber (Chinese Long) v2carcuB0552
Carg06904MELO3C014594Melon (DHL92) v3.5.1carmeB0528
Carg06904ClCG02G023220Watermelon (Charleston Gray)carwcgB0503
Carg06904CSPI04G13920Wild cucumber (PI 183967)carcpiB0559
Carg06904Cucsa.065570Cucumber (Gy14) v1carcgyB0594
Carg06904CmaCh20G000840Cucurbita maxima (Rimu)carcmaB0732
Carg06904CmoCh20G000880Cucurbita moschata (Rifu)carcmoB0709
Carg06904Lsi10G010620Bottle gourd (USVL1VR-Ls)carlsiB471
Carg06904Cp4.1LG16g08940Cucurbita pepo (Zucchini)carcpeB0733
Carg06904CsGy4G013500Cucumber (Gy14) v2carcgybB0529
Carg06904MELO3C014594.2Melon (DHL92) v3.6.1carmedB0533
Carg06904CsaV3_4G024260Cucumber (Chinese Long) v3carcucB0559
Carg06904Cla97C02G049320Watermelon (97103) v2carwmbB0543
Carg06904Bhi10G000233Wax gourdcarwgoB0629
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg06904Wax gourdcarwgoB0634
Carg06904Silver-seed gourdcarcarB209
Carg06904Silver-seed gourdcarcarB381
Carg06904Silver-seed gourdcarcarB452
Carg06904Silver-seed gourdcarcarB463
Carg06904Silver-seed gourdcarcarB498
Carg06904Cucumber (Gy14) v2carcgybB0527
Carg06904Cucumber (Gy14) v1carcgyB0599
Carg06904Cucurbita maxima (Rimu)carcmaB0726
Carg06904Cucurbita maxima (Rimu)carcmaB0727
Carg06904Cucurbita maxima (Rimu)carcmaB0730
Carg06904Cucurbita maxima (Rimu)carcmaB0733
Carg06904Cucurbita maxima (Rimu)carcmaB0734
Carg06904Cucurbita moschata (Rifu)carcmoB0703
Carg06904Cucurbita moschata (Rifu)carcmoB0704
Carg06904Cucurbita moschata (Rifu)carcmoB0707
Carg06904Cucurbita moschata (Rifu)carcmoB0710
Carg06904Cucurbita moschata (Rifu)carcmoB0711
Carg06904Cucurbita pepo (Zucchini)carcpeB0732
Carg06904Cucurbita pepo (Zucchini)carcpeB0734
Carg06904Cucurbita pepo (Zucchini)carcpeB0735
Carg06904Cucurbita pepo (Zucchini)carcpeB0740
Carg06904Cucurbita pepo (Zucchini)carcpeB0741
Carg06904Wild cucumber (PI 183967)carcpiB0558
Carg06904Wild cucumber (PI 183967)carcpiB0561
Carg06904Cucumber (Chinese Long) v2carcuB0551
Carg06904Cucumber (Chinese Long) v2carcuB0554
Carg06904Cucumber (Chinese Long) v3carcucB0557
Carg06904Cucumber (Chinese Long) v3carcucB0561
Carg06904Bottle gourd (USVL1VR-Ls)carlsiB473
Carg06904Bottle gourd (USVL1VR-Ls)carlsiB477
Carg06904Melon (DHL92) v3.5.1carmeB0526
Carg06904Melon (DHL92) v3.5.1carmeB0527
Carg06904Melon (DHL92) v3.6.1carmedB0532
Carg06904Watermelon (Charleston Gray)carwcgB0505
Carg06904Watermelon (97103) v1carwmB0514
Carg06904Watermelon (97103) v1carwmB0516
Carg06904Watermelon (97103) v2carwmbB0546