Carg12297 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12297
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Chaperone DnaJ
Location	Cucurbita_argyrosperma_scaffold_074 : 142676 .. 145447 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAATAGCGGAACAAGAAGCAGGTAGAGAATTTTCTTTGTTCTGCGCGAAAGAACTCACAATTCCTTCTCAATGGAGCTGACTCTGCCTACACCCTTGTTTGCCTCCTCCTCCAAGAGTACGCTTGAATTCTGTTTGCTTTGAATTTCGTTCCATTTCTCTGTTCCCCATGTTGCCAGATTGGGATTTTCCATTGATATCTGTTCATGTGGGTTCTTAGAGCTCGAACTTTCTTTCGCCATTTCTTTTCTTGCGATTGCCCTTTCGTTGTTTTCGGTCTTTCTGCAACAGGGTTTTGGTGGGTTTATCCATCAGTGTTGGGATTTTCCATGCCGGCGTGTTGTTTGACAAAAGTCGTTTGCCATAATTTGGTTGTTTTTGAAAGGTTTGAGGCCTGAGAGACTAGATTTGTGGGTTTGCTATGATTCATGTGATTGTTTGGTTGCTTACTCATCTTTAGTAATGGTTAATTAAGATGAATCTTTGGTTGGCGAGCATTGCTTAGTTGTTTGGACGGGATGGATTAGGACTATTGAGTGTTATGACGGGTGACAACAAAGGGGTTGTATACCATATTGCTGAAACCAAGGAGGCTTATGATTAAGGTCTTTTAGTTCATGTAAATTTGAGAAATGTAGGTCACGAAGTAGTGCAATGTACCACTATTGAAGACGTTGGTTTTGTATTGGGGTGGTTTAAGGGCACTCTGTAGCCTCAAGGTACCGATTGTCACAAAGAGGAGCCCTTAACATGCCTTGAGAAGAAATTTTGTCAACGATATCGTGCCCCTGGAGCGATATTGTGAGATCTCACATTAGTTGGAGAGAAGAACGAAACATTTTTTGTAAAGGTGTGGAAACCTCTCCCTAGCATATGCATTTTAAAAACCTTGAGGGGAAGCCTGAAAAGAACAATATATGCTAGCGGTGGGCTTGAGTCGTTACAAATGGTATAAGAACCAGATACCAGGCGGTGTGCTAGCGAGGACACTGGGCCGTGAAAGGATGTGAATTGTGAGATCCCACATCGATTGAAGAGGCGAACGAGTCTAGTGTTCGGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAAGGGAACGAAACATTCTTTATAAGGGTGTGGAAACGTCTCCCTAGCAAATGTGTTTTAAAAACCTTGAGAGGAAGCCCTTAAGCAATCGTGACATGTTATTTCCGCTAGCTATTTGACTGTGATTGTTTACACAACTGTTTGATGCAACTCTTAGCAGAAAAGTGGTGTCAAAGCTGTTGATCATTGTTCTTTGCCTAACATTACAATGTCTTGTTAAAGCTCTACATTATGAATTTATGATGTGACATGTAAACTTTCTGCTGATTGAAATTCTGTTATTGTGAAGTAATTAGGGATCCTAAGCTAATCAACCATGGACTTCGGTTGTTGGACACCAATCCTATTTCAGCCGATTTGAAGCTACAAGGAGGGAGAAGAACACTGCCTATAGCTTCTTCCCTACCTGAAACAGCTGCTTCTGTGGCCATTGCTGCTACAGTTGTAGGTGCAGCAGCCACCTTCCTTTCCAGAAGAAACAAAGATTCTGAGGCGAAGGAGGTTGGCTTCAGATCTAAAACACCATTTATATGCCATTATCATATAGAATCAAGTGTTTGAAACCTGCATCTTGTCAGTTACTACACCGTTTTTGTTTTTGTGTCGTTACTGAAAAAGCACGGAAGCTTTAGTTTGGCTAACATGCTCGTGTCTAACACATATAGACACTTGGATGCTTGTTAGACATGTGCTAGATACTTGATAGCACAATAAACGTGAGACCCCACATTGATTAGAAAGGGGAACGAGTGTCAGCCAGAACGTTGGGCGGTGGGATTGTGGGATCTCACATCGGTTGGAGAGGAGAACAAAATATTCTTTATAAGGGTGTGGAAACCCTCCTTAGTAGACGCGTTTTTAAAACCTCAAGGGAAACCTCAAAGAGGACAATATCTGTTACTAATGAACTTGAGCTGTTACAAATGGTATCTGAGTCAATCACCTGGTCGGAGTAGAGCTAGACCCTCTCTATAGTAGATGTGTTTTGAAAACCGTGAGGTTGACAGTGATATGTAACGAGCCAAAACAGACAATATATACTAGCGGTGGGCTTGAGCTGTTATAATAAATACGTTAGACACATGCATAGGTTACTTATTTCGAATTCAAAACTTGTTCTTATCGTATTTGTATCATGTCATATCGATGTCTCGTGTCCATATCCTTGCTTCTTTTATTCGTATCTTTGTATGCAACTCTTGTGCTGATTTTGTCCATAAAATTCAGATTCCTTTGAGACCATGTGAAGACTGTGGAGGTTCAGGCCTGTGTTCTGAATGCAAAGGTGAAGGGTTTGTGCTGAAGAAACTGTCGGATGAAAATGCAGAGCGGGCACGGTTGGCTGCGAAGAACATGGCCACTCGGTTCACCGCAGCGTACAAATTTCTTGTCTTGTCTCTCTTTTTCTTGTTAGAAACCTTCAACTTTCAACTTATATCTGATCTTAATCCTTTCTCAGGCTTCCTAAAAAATGGAGCTACTGTTCCAAGTGTTCTTCTGCTCGTTCTTGTAGTACTTGTGGTGGCACGGGGACGTTCAACTCTTAGTCTTACAACCCGACAAACTCCTTATATCTCCGCATATTTTTCTGTCTCGTAAATTTCTCTCATTAGGAGTGTTCAAAGAATTCGATGACTCACAAAATTTAATCAACCCAATCTAATTCGTATGACTCGGATGGGG

mRNA sequence

AAGAATAGCGGAACAAGAAGCAGGTAGAGAATTTTCTTTGTTCTGCGCGAAAGAACTCACAATTCCTTCTCAATGGAGCTGACTCTGCCTACACCCTTGTTTGCCTCCTCCTCCAAGATAATTAGGGATCCTAAGCTAATCAACCATGGACTTCGGTTGTTGGACACCAATCCTATTTCAGCCGATTTGAAGCTACAAGGAGGGAGAAGAACACTGCCTATAGCTTCTTCCCTACCTGAAACAGCTGCTTCTGTGGCCATTGCTGCTACAGTTGTAGGTGCAGCAGCCACCTTCCTTTCCAGAAGAAACAAAGATTCTGAGGCGAAGGAGATTCCTTTGAGACCATGTGAAGACTGTGGAGGTTCAGGCCTGTGTTCTGAATGCAAAGGTGAAGGGTTTGTGCTGAAGAAACTGTCGGATGAAAATGCAGAGCGGGCACGGTTGGCTGCGAAGAACATGGCCACTCGGTTCACCGCAGCGCTTCCTAAAAAATGGAGCTACTGTTCCAAGTGTTCTTCTGCTCGTTCTTGTAGTACTTGTGGTGGCACGGGGACGTTCAACTCTTAGTCTTACAACCCGACAAACTCCTTATATCTCCGCATATTTTTCTGTCTCGTAAATTTCTCTCATTAGGAGTGTTCAAAGAATTCGATGACTCACAAAATTTAATCAACCCAATCTAATTCGTATGACTCGGATGGGG

Coding sequence (CDS)

ATGGAGCTGACTCTGCCTACACCCTTGTTTGCCTCCTCCTCCAAGATAATTAGGGATCCTAAGCTAATCAACCATGGACTTCGGTTGTTGGACACCAATCCTATTTCAGCCGATTTGAAGCTACAAGGAGGGAGAAGAACACTGCCTATAGCTTCTTCCCTACCTGAAACAGCTGCTTCTGTGGCCATTGCTGCTACAGTTGTAGGTGCAGCAGCCACCTTCCTTTCCAGAAGAAACAAAGATTCTGAGGCGAAGGAGATTCCTTTGAGACCATGTGAAGACTGTGGAGGTTCAGGCCTGTGTTCTGAATGCAAAGGTGAAGGGTTTGTGCTGAAGAAACTGTCGGATGAAAATGCAGAGCGGGCACGGTTGGCTGCGAAGAACATGGCCACTCGGTTCACCGCAGCGCTTCCTAAAAAATGGAGCTACTGTTCCAAGTGTTCTTCTGCTCGTTCTTGTAGTACTTGTGGTGGCACGGGGACGTTCAACTCTTAG

Protein sequence

MELTLPTPLFASSSKIIRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS

Homology

[Close]

BLAST of Carg12297 vs. NCBI nr
Match: XP_022948420.1 (uncharacterized protein LOC111452109 [Cucurbita moschata])

HSP 1 Score: 320.1 bits (819), Expect = 4.4e-84
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MELTLPTPLFASSSKIIRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSLPETAAS 60
           MELTLPTPLFASSSKIIRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSLPETAAS
Sbjct: 1   MELTLPTPLFASSSKIIRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS 164

[Close]

BLAST of Carg12297 vs. NCBI nr
Match: XP_023525360.1 (uncharacterized protein LOC111788983 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.3 bits (804), Expect = 2.4e-82
Identity = 161/164 (98.17%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MELTLPTPLFASSSKIIRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSLPETAAS 60
           MELTLPTPLFASSSKIIRDPK INHGLRL D+NPISADLKLQGGRRTLPIASSLPETAAS
Sbjct: 1   MELTLPTPLFASSSKIIRDPKPINHGLRLFDSNPISADLKLQGGRRTLPIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS 164

[Close]

BLAST of Carg12297 vs. NCBI nr
Match: XP_022998903.1 (uncharacterized protein LOC111493423 [Cucurbita maxima])

HSP 1 Score: 309.7 bits (792), Expect = 6.0e-81
Identity = 159/164 (96.95%), Postives = 161/164 (98.17%), Query Frame = 0


Query: 1   MELTLPTPLFASSSKIIRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSLPETAAS 60
           MELTLPTPLFASSSKIIRDPK INHGLRL D+NPISADLKLQGGRRTL IASSLPETAAS
Sbjct: 1   MELTLPTPLFASSSKIIRDPKPINHGLRLFDSNPISADLKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKDSEA+EIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAEEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS 164

[Close]

BLAST of Carg12297 vs. NCBI nr
Match: XP_023522425.1 (uncharacterized protein LOC111786358, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.2 bits (731), Expect = 7.1e-74
Identity = 145/150 (96.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 15  KIIRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSLPETAASVAIAATVVGAAATF 74
           ++IRDPK INHGLRL D+NPISADLKLQGGRRTLPIASSLPETAASVAIAATVVGAAATF
Sbjct: 2   EVIRDPKPINHGLRLFDSNPISADLKLQGGRRTLPIASSLPETAASVAIAATVVGAAATF 61

Query: 75  LSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFT 134
           LSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFT
Sbjct: 62  LSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFT 121

Query: 135 AALPKKWSYCSKCSSARSCSTCGGTGTFNS 165
           AALPKKWSYCSKCSSARSCSTCGGTGTFNS
Sbjct: 122 AALPKKWSYCSKCSSARSCSTCGGTGTFNS 151

[Close]

BLAST of Carg12297 vs. NCBI nr
Match: XP_023522036.1 (uncharacterized protein LOC111785907, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.6 bits (727), Expect = 2.1e-73
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 17  IRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSLPETAASVAIAATVVGAAATFLS 76
           IRDPK INHGLRL D+NPISADLKLQGGRRTLPIASSLPETAASVAIAATVVGAAATFLS
Sbjct: 1   IRDPKPINHGLRLFDSNPISADLKLQGGRRTLPIASSLPETAASVAIAATVVGAAATFLS 60

Query: 77  RRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAA 136
           RRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAA
Sbjct: 61  RRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAA 120

Query: 137 LPKKWSYCSKCSSARSCSTCGGTGTFNS 165
           LPKKWSYCSKCSSARSCSTCGGTGTFNS
Sbjct: 121 LPKKWSYCSKCSSARSCSTCGGTGTFNS 148

[Close]

BLAST of Carg12297 vs. TAIR10
Match: AT3G45050.2 (unknown protein)

HSP 1 Score: 159.8 bits (403), Expect = 1.4e-39
Identity = 88/152 (57.89%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 10  FASSSKIIRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSLPETAASVAIAATVVG 69
           F SS   ++D + +N  L+             Q  +R+  +  +L ETA S+AIAATVVG
Sbjct: 13  FPSSVSSVKDVRFLNLDLK----------SSHQRAKRSSTVVPALAETAVSIAIAATVVG 72

Query: 70  AAATFLSRR-NKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKN 129
            AAT L RR NK SE  E  ++ CE C GSG+C ECKGEGFVLKKLSD NAE+ARLAAKN
Sbjct: 73  TAATILVRRNNKASEEAEASMKECEACLGSGICPECKGEGFVLKKLSDANAEKARLAAKN 132

Query: 130 MATRFTAALPKKWSYCSKCSSARSCSTCGGTG 161
           MATR+TA LPKKWSYC+KCSS RSC  CGG+G
Sbjct: 133 MATRYTAGLPKKWSYCTKCSSTRSCMICGGSG 154

[Close]

BLAST of Carg12297 vs. TrEMBL
Match: tr|A0A0A0LVE3|A0A0A0LVE3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097700 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.8e-71
Identity = 143/164 (87.20%), Postives = 152/164 (92.68%), Query Frame = 0


Query: 1   MELTLPTPLFASSSKIIRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSLPETAAS 60
           MELTLPTPLF S  KI+R+ K  N+GL LLD+NP+SAD+KLQGGRRTL IASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNK+SEA E+PL  CEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGG+GT NS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 164

[Close]

BLAST of Carg12297 vs. TrEMBL
Match: tr|A0A1S3CIP4|A0A1S3CIP4_CUCME (uncharacterized protein LOC103501412 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501412 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.1e-70
Identity = 142/164 (86.59%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 1   MELTLPTPLFASSSKIIRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSLPETAAS 60
           MELTLPTPLF S  KI+R  K  NHGL LL++ P+SAD+KLQGGRRTL IASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPKIVRSSKPNNHGLCLLNSIPLSADMKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKDSEA E+PL  CEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGG+GT +S
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 164

[Close]

BLAST of Carg12297 vs. TrEMBL
Match: tr|A0A1S3CJ25|A0A1S3CJ25_CUCME (uncharacterized protein LOC103501412 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501412 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.3e-68
Identity = 141/170 (82.94%), Postives = 151/170 (88.82%), Query Frame = 0


Query: 1   MELTLPTPLF------ASSSKIIRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSL 60
           MELTLPTPLF       SS +++R  K  NHGL LL++ P+SAD+KLQGGRRTL IASSL
Sbjct: 1   MELTLPTPLFVSIPKKCSSCEVVRSSKPNNHGLCLLNSIPLSADMKLQGGRRTLTIASSL 60

Query: 61  PETAASVAIAATVVGAAATFLSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKL 120
           PETAASVAIAATVVGAAATFLSRRNKDSEA E+PL  CEDCGGSGLCSECKGEGFVLKKL
Sbjct: 61  PETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL 120

Query: 121 SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS 165
           SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGG+GT +S
Sbjct: 121 SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 170

[Close]

BLAST of Carg12297 vs. TrEMBL
Match: tr|A0A1S3CJ40|A0A1S3CJ40_CUCME (uncharacterized protein LOC103501412 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103501412 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.9e-60
Identity = 130/164 (79.27%), Postives = 134/164 (81.71%), Query Frame = 0


Query: 1   MELTLPTPLFASSSKIIRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSLPETAAS 60
           MELTLPTPLF S  K                      D+KLQGGRRTL IASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPK---------------------TDMKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKDSEA E+PL  CEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGG+GT +S
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 143

[Close]

BLAST of Carg12297 vs. TrEMBL
Match: tr|A0A2I4EK64|A0A2I4EK64_9ROSI (uncharacterized protein LOC108990324 OS=Juglans regia OX=51240 GN=LOC108990324 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.7e-47
Identity = 107/160 (66.88%), Postives = 123/160 (76.88%), Query Frame = 0


Query: 1   MELTLPTPLFASSSKIIRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSLPETAAS 60
           ME  L    F S SK IRD K         ++ P+      + GR+TL ++S+LPETAAS
Sbjct: 1   MEHALHALSFPSFSKTIRDFK--------HNSCPLRDGKSQEPGRKTLTVSSALPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFL RR K SE  EIP++ CEDCGGSG+CSECKGEGFVLKKLS+++AE
Sbjct: 61  VAIAATVVGAAATFLVRRTKASETPEIPMKVCEDCGGSGICSECKGEGFVLKKLSEDSAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTG 161
           RARLAAKNMATR+TA LPKKWSYC+KCSSARSCSTC G G
Sbjct: 121 RARLAAKNMATRYTAGLPKKWSYCTKCSSARSCSTCAGRG 152

The following BLAST results are available for this feature:

BLAST of Carg12297 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948420.1	4.4e-84	100.00	uncharacterized protein LOC111452109 [Cucurbita moschata]	[more]
XP_023525360.1	2.4e-82	98.17	uncharacterized protein LOC111788983 [Cucurbita pepo subsp. pepo]	[more]
XP_022998903.1	6.0e-81	96.95	uncharacterized protein LOC111493423 [Cucurbita maxima]	[more]
XP_023522425.1	7.1e-74	96.67	uncharacterized protein LOC111786358, partial [Cucurbita pepo subsp. pepo]	[more]
XP_023522036.1	2.1e-73	97.97	uncharacterized protein LOC111785907, partial [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg12297 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G45050.2	1.4e-39	57.89	unknown protein	[more]

BLAST of Carg12297 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg12297 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LVE3\|A0A0A0LVE3_CUCSA	4.8e-71	87.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097700 PE=4 SV=1	[more]
tr\|A0A1S3CIP4\|A0A1S3CIP4_CUCME	3.1e-70	86.59	uncharacterized protein LOC103501412 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3CJ25\|A0A1S3CJ25_CUCME	2.3e-68	82.94	uncharacterized protein LOC103501412 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3CJ40\|A0A1S3CJ40_CUCME	3.9e-60	79.27	uncharacterized protein LOC103501412 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2I4EK64\|A0A2I4EK64_9ROSI	3.7e-47	66.88	uncharacterized protein LOC108990324 OS=Juglans regia OX=51240 GN=LOC108990324 P...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12297-RA	Carg12297-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37230	FAMILY NOT NAMED	coord: 34..162

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12297	Cla005081	Watermelon (97103) v1	carwmB0440
Carg12297	Csa1G097700	Cucumber (Chinese Long) v2	carcuB0472
Carg12297	MELO3C004968	Melon (DHL92) v3.5.1	carmeB0449
Carg12297	ClCG03G002650	Watermelon (Charleston Gray)	carwcgB0436
Carg12297	CSPI01G13200	Wild cucumber (PI 183967)	carcpiB0477
Carg12297	Cucsa.207690	Cucumber (Gy14) v1	carcgyB0511
Carg12297	CmaCh01G005200	Cucurbita maxima (Rimu)	carcmaB0613
Carg12297	CmoCh01G005510	Cucurbita moschata (Rifu)	carcmoB0596
Carg12297	Lsi03G000010	Bottle gourd (USVL1VR-Ls)	carlsiB404
Carg12297	Cp4.1LG02g12700	Cucurbita pepo (Zucchini)	carcpeB0622
Carg12297	CsGy1G013320	Cucumber (Gy14) v2	carcgybB0449
Carg12297	MELO3C004968.2	Melon (DHL92) v3.6.1	carmedB0452
Carg12297	CsaV3_1G013380	Cucumber (Chinese Long) v3	carcucB0474
Carg12297	Cla97C03G053700	Watermelon (97103) v2	carwmbB0467
Carg12297	Bhi08G000219	Wax gourd	carwgoB0532

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12297	Silver-seed gourd	carcarB448
Carg12297	Silver-seed gourd	carcarB450
Carg12297	Cucumber (Gy14) v2	carcgybB0451
Carg12297	Cucurbita maxima (Rimu)	carcmaB0611
Carg12297	Cucurbita moschata (Rifu)	carcmoB0594
Carg12297	Cucurbita pepo (Zucchini)	carcpeB0620
Carg12297	Wild cucumber (PI 183967)	carcpiB0479
Carg12297	Cucumber (Chinese Long) v2	carcuB0474
Carg12297	Cucumber (Chinese Long) v3	carcucB0476
Carg12297	Watermelon (Charleston Gray)	carwcgB0432
Carg12297	Watermelon (97103) v1	carwmB0439
Carg12297	Wax gourd	carwgoB0528