CSPI01G13200 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G13200
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Chaperone DnaJ
Location	Chr1 : 8661929 .. 8666419 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAATCATAAAGCAAAATGCGTCGGTCTCTGCTGCTTCTTGAAAATATCTGTGAAAAGATAAGCAGGGACCCAAGACTTTGGGAGCGCCAAGCAACTACATACTGGAGTTTGTTTCTCAATGGAGCTAACTCTGCCTACCCCCTTGTTTGTCTCCATCCCCAAGAGTACGCTTTAATTCTTTATCTCATTTCCATTTCTCTGTTTCCCAATTCATATCATCACACACTTAACTTACCCATGTTTCCAATTTGGGTTTTTTCCCATTGAAGTTTATGCTCGAGACTCATATTAAGTTTCAGAGATTGATGTAATTCAATTATCCGTTCTTTCTCTTTCGTCTTTCTGCAAGAGGGGTTCAGTCAGTTTCTTTGTCTATATGGGGATTTTCAATGATTATGTGACTTTTGTTTTATTGGAGTTGTTTTGCATAATTTGGTTGTGCTGGACAGCTTTGAGAGACTAGACTTTGTTGGTCTGCTATTATTAATGTGATTGTTTAGTTGCTTACTCATCTATATTGTAGTTTAATTAAGATGAATATTGGTTGGCTGTTCGCTAGCAGTTTTTAGTTGTTTGAAACGTTTGGAATAAGACTCTTGAGTGATATGATGGTTGACAGTGAAGAGTGTTGTATCACATTGCTGGAATTAACGTCATATACTAGTTCATGATTAAGATCTTCTATATCTAGTAAATTATGGTGAAGGGAATATAACCAAATTTGCGAAATCTAGATCATAAAGTAGTGCAGTGTGCCACTCTTGAAGACATTGGTTTTGTATTGAGGGTGCTTTAAGAGCACTTTGTAAGGAGAAGCCCTTTAGTTTCTCTTGAGGATGACAAGGTGTCATTGATGTTGTGATCCAGAACAATGTCTCAAATTCATGTGGAAGACACAATCTAAAGTTGCCTTTAGGAGGTTGTGGCATGTTATTTATGACATGCTGGCGGAGCCATCTATTTGAATATGGTTGGTTGTTTAGAAAGTTTTCATAGCTGTTACGTCGTAGTTCTTTTCGTTACATTCCATTAGAAGGCCACATTTGATGTGTGTGTGCTAGTGTCACAAATTGAACATGATCTATTTTTAGGAGGATGTGTGGTAGTTCTTTTACAACCTTACTTGAACATGATCTATTTTTTAGTTTATACAACTGTGTCCTTGAGTTCTACCAACTAAATTTTATCTATAAGATGACCTTCCTCACCTAAGTGCTACTGCTGACTACCTTGGAAAGAAACTCTGTATCTCATTTTGTTTAGCCACATATTTGGCTCTCCTCTTCCCAAAGTTCAACTTTAGTCGGTTTCATCATTGATCCATTGCTCATGCTATTGAACAACTTTTTGTCAATTCCTTCGTAAGCATCCAATGTTTATTTGGGAATGCTTACGTAAGTGTTTACAAGCTTCAATATGACAAGTTGAAATTGTAGCAAAATCCGGGAGATCAGTCATTTTGATGCTTCTACTTGGTCCACCACTAGTTAATTATGATACCTTTTTATACCCGTTCGTATATTTTCTTCAATAAGTGTCCTACTGATAATTTACTTCACGTAGACCTCACTTTTTTTTCATTTATTTTATTTTTTTTCCTTCCTTTTTATATTTCTGTTATTATTTTAACAGGTTATGCTCACAAGACCATCTTCTTTACCTGTTGCATTTAGAATTAAAAATTAGATTTGACAAATTTTATTAAATCATCTCTCTGAAATTAGGGGATAAAAATTTGTTGGTTAAAGCTCTAAAATCGAAATATGCAAACCATGCGTGAATTTATTATTTCTTTCCTCTAGACTTGTTAGAATCTACATTATGAACTTATGCTATTACGTCAAAACTTTCTGCTGATTGGAATGCTGTTCATGTGAAGTCGTTAGGAATTCTAAACCCAACAACAATGGCCTTTGCTTGTTGGACTCCAATCCTCTTTCAGCTGATGTGAAACTACAAGGAGGAAGAAGAACATTGACTATAGCTTCTTCTCTACCTGAAACCGCTGCTTCTGTGGCAATTGCTGCTACAGTTGTAGGTGCAGCAGCCACCTTTCTTTCCAGAAGAAACAAAAATTCTGAGGCAGTGGAGGTGTGCTTTTACATATGAAACACTGTTTTTTGCCATTACCTTATCGTCAAGTTTCTGGAATCTGTATCTTGTCAGTTACACTGTTTTTGTGTCATTATCTAAGAAGCACGGGCACTTGCATTTAGCTTACATGTCCACGTACATGTTTGTTACTTGGACACTCCAACACTTGTTTGACACACATCAAATACTTGTTGGCACAATAGACATGTTAGACTTTAAAAGTTGGGTCAAATATTTGTTAGACATGTATCGAACACTTGTTTCATGCTAAATAGACACATAGTAGTTTAAGATAAAAATAATAAAATTTGAGGGTAAAATACATCAAGTTCAATTTTTAAGCATATAGATGCGCTTATTGGATTTGAATTTCTTTCTTATATAGAAAGGATATATATTTTAGACACTAAAAAGTGTTTTTCTTATCATGTTCACATCCTATTTTTAAAATAATGTGTCACCATGTCTGTGTTATGTCTTACTCATGACTCAAGTTCATATTTGAGTTTCTTATCTACCAGATTTTGGTTATTGAACTACCCCTATGCTCAAATGCTTAAGTTGATATGTGCATTTGATCTTTTATTCATATTCTTAATAGAGTAGATTACTTGCGGACTTGAAAATCAACACAATACCTGAACCTGACTAGCAATATATTTTTAGGAAGAAATAGTGTTAAAGAGGTTCATACATTGAATTTCCAGTCATAACATGCTAAATGGCCACTTTTCTTTTCTTTTGTGTCTTTTAAAGAAGCAATTGAATTGAAGTATGAAAATTATAAAAGGGAAGAAAGTTAAGTCTTGGGGCTTTTTAACCTAATGAAATTTTTTTTAAAGAAAATCCTTAATTCTTGCAATCTTTTAAAAATAATGAAAAAGTCCCCCTGGCTCAGGGCTTTAAGCCTTGGGGCTTCACAAAAGGCGTGTGCTTGAGGCACACCTTATTTAGTTAGCCTCACCTTTCCAAGGTGAGGTTCTAGACCTGCCTTGAGCTAGGCACACGCCCAAAAGGGGTTTTTAAAGCACTAGGTCATCTTAAAGAGTTTTTACTTCTTTCTGAAAAGATGACCCAAAAGAGCAGTGGAGAGGAGAGCTTTTGGATTCTTTGGGAGAGCCAGAGACCAATTGAAAGCATATCCTTCTGAAAAGATGATGCACCGTTTGAGGATGTAAGATCATGGATGGGTTCCTTCTTTGGAGCTCATTTTGCGTGTTTGTTGCCATATTTATCTTTCCATATATAATATATATTTTAAAATCTCTTTTTAAGTACAACTTGAAGGTGGGGAAATTAGAACTTGGAACCTCTTGTCCTTGGGAACATACAGAAGCCAGTTAAGCTAAACTCATGTTGGCTTATCTCTCTATATTGCCTCTGTTAAAAGAGTTTGCAGAGCATCTCCCTTTTGTTCTGAATCACTAAACTTGGATTTAGTGGAAAACATACCATTGGATTCCAAAAGGATTAAGGTGTAAGGCAGACAAGTAATTTTTTTTAAACAACAAATGTGGAGTATGGTGATTTGGACCTCTAACCTAGAAAGAATTACATGCCAATTAACTAAGCTAGGCTCATATTGCTTATGTTGGTGATAGAAAGTGGTTTAATTCTGCCTATTCGGCTATGTCCTCACTCTTAAGAATTTTTAGTTTTATGTTCCAAATGTCAAGATCTATTGGCAACAAATCCTTTACAGCAGCATTTTTCTGGTTTCCATAAACCTTACAGTACTACTACTAAACTCAAATATTTTAAATTGGTGTGGTTGTGTTACATTAGATCTTTTCTTTTCTACTGACTTATTTTGTGGATTGTCTGAAATTAATGCAATGGTTTCCCTTTAAATTTCAGGTTCCTTTGATAACATGTGAAGATTGTGGTGGTTCAGGCTTATGTTCTGAATGCAAAGGTGAAGGATTTGTGCTTAAGAAACTGTCAGATGAAAATGCAGAGCGGGCGAGGTTGGCTGCGAAGAATATGGCCACTCGATTCACCGCAGCGTATAATTTTCTTGACACACTCTCCTCTTTTTAGGAAGCTTCTACTTTCAACTAATAATCTGACTTTAATCTTTCTCAGGCTTCCTAAAAAATGGAGTTACTGTTCCAAGTGCTCTTCTGCTCGTTCTTGTAGTACTTGTGGTGGCAGTGGGACGTTGAACTCTTAGTTAGAAATTTTAATAAAGTGATGAATTCTTTACAAATGTACATGAGAGTTTAGATCACAAACGCTGGTCTTATTGTTTAAAGGAAATTTGACTTTGTTCTTTTATGAGTTTGCTGAATCAGTTTAGAGTTAAACATATTGTAAATAGTAACATTGACAAATAGGTGAATCTAATGCACAAGTCTTACAATGTTAAAAACAACATGAAAGGCAGCAAGTC

mRNA sequence

ATGGAGCTAACTCTGCCTACCCCCTTGTTTGTCTCCATCCCCAAGATCGTTAGGAATTCTAAACCCAACAACAATGGCCTTTGCTTGTTGGACTCCAATCCTCTTTCAGCTGATGTGAAACTACAAGGAGGAAGAAGAACATTGACTATAGCTTCTTCTCTACCTGAAACCGCTGCTTCTGTGGCAATTGCTGCTACAGTTGTAGGTGCAGCAGCCACCTTTCTTTCCAGAAGAAACAAAAATTCTGAGGCAGTGGAGGTTCCTTTGATAACATGTGAAGATTGTGGTGGTTCAGGCTTATGTTCTGAATGCAAAGGTGAAGGATTTGTGCTTAAGAAACTGTCAGATGAAAATGCAGAGCGGGCGAGGTTGGCTGCGAAGAATATGGCCACTCGATTCACCGCAGCGCTTCCTAAAAAATGGAGTTACTGTTCCAAGTGCTCTTCTGCTCGTTCTTGTAGTACTTGTGGTGGCAGTGGGACGTTGAACTCTTAG

Coding sequence (CDS)

ATGGAGCTAACTCTGCCTACCCCCTTGTTTGTCTCCATCCCCAAGATCGTTAGGAATTCTAAACCCAACAACAATGGCCTTTGCTTGTTGGACTCCAATCCTCTTTCAGCTGATGTGAAACTACAAGGAGGAAGAAGAACATTGACTATAGCTTCTTCTCTACCTGAAACCGCTGCTTCTGTGGCAATTGCTGCTACAGTTGTAGGTGCAGCAGCCACCTTTCTTTCCAGAAGAAACAAAAATTCTGAGGCAGTGGAGGTTCCTTTGATAACATGTGAAGATTGTGGTGGTTCAGGCTTATGTTCTGAATGCAAAGGTGAAGGATTTGTGCTTAAGAAACTGTCAGATGAAAATGCAGAGCGGGCGAGGTTGGCTGCGAAGAATATGGCCACTCGATTCACCGCAGCGCTTCCTAAAAAATGGAGTTACTGTTCCAAGTGCTCTTCTGCTCGTTCTTGTAGTACTTGTGGTGGCAGTGGGACGTTGAACTCTTAG

Homology

[Close]

BLAST of CSPI01G13200 vs. TrEMBL
Match: A0A0A0LVE3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097700 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 7.9e-84
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60
           MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 164

[Close]

BLAST of CSPI01G13200 vs. TrEMBL
Match: B9HQM1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s01400g PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-47
Identity = 112/165 (67.88%), Postives = 125/165 (75.76%), Query Frame = 1


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSA-DVKLQG-GRRTLTIASSLPETA 60
           MEL +    F S  K   N +    G  + D    S+ DVKLQ  GR+T T+  SLPETA
Sbjct: 1   MELAVHALSFTSFSK---NRESKLQGRTIPDPATCSSIDVKLQEQGRKTSTVCYSLPETA 60

Query: 61  ASVAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDEN 120
           ASVAIAAT VGAA T L RRNK SEA E+PL TCEDCGGSG+CSEC GEGFVLKKLS+E+
Sbjct: 61  ASVAIAATAVGAAITLLVRRNKPSEADEIPLKTCEDCGGSGICSECSGEGFVLKKLSEES 120

Query: 121 AERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLN 164
           AERARL+AKNMATR+TA LPKKWSYC+KCSSARSCS CGGSG LN
Sbjct: 121 AERARLSAKNMATRYTAGLPKKWSYCTKCSSARSCSACGGSGKLN 162

[Close]

BLAST of CSPI01G13200 vs. TrEMBL
Match: F6GWA4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00330 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.8e-46
Identity = 111/167 (66.47%), Postives = 131/167 (78.44%), Query Frame = 1


Query: 1   MELTLPT-PLFVSIPKIVRNSKPNNNGLCLLDSNPLSA-DVKLQGGRRTLT-IASSLPET 60
           MEL L T PL     K  R+ KP+ +     D +P+S+ DVKLQ  RR +  ++ +LPET
Sbjct: 1   MELALHTLPL-----KTSRDFKPHIHNA--FDPDPISSTDVKLQAQRRKICRVSYALPET 60

Query: 61  AASVAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDE 120
           AASVAIAATVVGAAAT L RR++ SEA E+PL  CEDCGGSG+CSEC GEGFVLKKLS+ 
Sbjct: 61  AASVAIAATVVGAAATLLVRRSRPSEATEIPLKICEDCGGSGICSECNGEGFVLKKLSEA 120

Query: 121 NAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           +AE+ARL AKNMATR+TA LPKKWSYC+KCSSARSCSTCGGSG L+S
Sbjct: 121 SAEKARLTAKNMATRYTAGLPKKWSYCTKCSSARSCSTCGGSGKLSS 160

[Close]

BLAST of CSPI01G13200 vs. TrEMBL
Match: A0A067L693_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05463 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.9e-45
Identity = 109/165 (66.06%), Postives = 126/165 (76.36%), Query Frame = 1


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSA-DVKLQGGRRTLT-IASSLPETA 60
           M L +PT  F S+ K +R S P      +LD    S+ DVKLQ  +R  + I S+LPETA
Sbjct: 1   MVLAVPTLSFASLAKTIRLSNPEVQ--YILDPVAWSSIDVKLQKQQRKASMIPSALPETA 60

Query: 61  ASVAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDEN 120
           ASVAIAATVVGAAAT L RR K SE  E+ L TCE+CGGSG+CSEC GEGFVLKKLS+E+
Sbjct: 61  ASVAIAATVVGAAATLLVRRTKESETNEIQLKTCEECGGSGICSECNGEGFVLKKLSEES 120

Query: 121 AERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLN 164
           AERARL AKNMATR+TAALPKKWSYC+KCSSARSC TCGG G ++
Sbjct: 121 AERARLNAKNMATRYTAALPKKWSYCTKCSSARSCVTCGGRGKVS 163

[Close]

BLAST of CSPI01G13200 vs. TrEMBL
Match: V4RT28_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029423mg PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.2e-45
Identity = 97/129 (75.19%), Postives = 109/129 (84.50%), Query Frame = 1


Query: 36  SADVKLQGGRRTL-TIASSLPETAASVAIAATVVGAAATFLSRRNKNSEAVEVPLITCED 95
           S D+K Q   R L T++S+LPETAASVAIAATVVGAAAT L RR K SE  E+PL TCED
Sbjct: 35  SIDIKSQEQERKLPTVSSALPETAASVAIAATVVGAAATLLVRRTKGSEETEIPLKTCED 94

Query: 96  CGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCS 155
           CGGSG+C ECKGEGFVLKKLS+E AERARL AKNMATR+TA LPKKWSYC+KCSS+RSC+
Sbjct: 95  CGGSGICPECKGEGFVLKKLSEETAERARLTAKNMATRYTAGLPKKWSYCTKCSSSRSCA 154

Query: 156 TCGGSGTLN 164
           TCGG G L+
Sbjct: 155 TCGGRGKLS 163

[Close]

BLAST of CSPI01G13200 vs. TAIR10
Match: AT3G45050.2 (AT3G45050.2 unknown protein)

HSP 1 Score: 160.6 bits (405), Expect = 8.2e-40
Identity = 96/163 (58.90%), Postives = 110/163 (67.48%), Query Frame = 1


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKL--QGGRRTLTIASSLPETA 60
           MEL+L      S P  V + K         D   L+ D+K   Q  +R+ T+  +L ETA
Sbjct: 1   MELSLIKLQSFSFPSSVSSVK---------DVRFLNLDLKSSHQRAKRSSTVVPALAETA 60

Query: 61  ASVAIAATVVGAAATFLSRRN-KNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDE 120
            S+AIAATVVG AAT L RRN K SE  E  +  CE C GSG+C ECKGEGFVLKKLSD 
Sbjct: 61  VSIAIAATVVGTAATILVRRNNKASEEAEASMKECEACLGSGICPECKGEGFVLKKLSDA 120

Query: 121 NAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSG 161
           NAE+ARLAAKNMATR+TA LPKKWSYC+KCSS RSC  CGGSG
Sbjct: 121 NAEKARLAAKNMATRYTAGLPKKWSYCTKCSSTRSCMICGGSG 154

[Close]

BLAST of CSPI01G13200 vs. NCBI nr
Match: gi|449459098|ref|XP_004147283.1| (PREDICTED: uncharacterized protein LOC101218484 isoform X1 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 1.1e-83
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60
           MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 164

[Close]

BLAST of CSPI01G13200 vs. NCBI nr
Match: gi|659072055|ref|XP_008463215.1| (PREDICTED: uncharacterized protein LOC103501412 isoform X2 [Cucumis melo])

HSP 1 Score: 303.5 bits (776), Expect = 2.2e-79
Identity = 157/164 (95.73%), Postives = 163/164 (99.39%), Query Frame = 1


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60
           MELTLPTPLFVSIPKIVR+SKPNN+GLCLL+S PLSAD+KLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPKIVRSSKPNNHGLCLLNSIPLSADMKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNK+SEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 164

[Close]

BLAST of CSPI01G13200 vs. NCBI nr
Match: gi|659072053|ref|XP_008463206.1| (PREDICTED: uncharacterized protein LOC103501412 isoform X1 [Cucumis melo])

HSP 1 Score: 296.6 bits (758), Expect = 2.7e-77
Identity = 156/170 (91.76%), Postives = 163/170 (95.88%), Query Frame = 1


Query: 1   MELTLPTPLFVSIPK------IVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSL 60
           MELTLPTPLFVSIPK      +VR+SKPNN+GLCLL+S PLSAD+KLQGGRRTLTIASSL
Sbjct: 1   MELTLPTPLFVSIPKKCSSCEVVRSSKPNNHGLCLLNSIPLSADMKLQGGRRTLTIASSL 60

Query: 61  PETAASVAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL 120
           PETAASVAIAATVVGAAATFLSRRNK+SEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL
Sbjct: 61  PETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL 120

Query: 121 SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Sbjct: 121 SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 170

[Close]

BLAST of CSPI01G13200 vs. NCBI nr
Match: gi|778659062|ref|XP_011653737.1| (PREDICTED: uncharacterized protein LOC101218484 isoform X2 [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 9.7e-67
Identity = 142/164 (86.59%), Postives = 142/164 (86.59%), Query Frame = 1


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60
           MELTLPTPLFVSIPK                      DVKLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPK---------------------TDVKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 143

[Close]

BLAST of CSPI01G13200 vs. NCBI nr
Match: gi|659072057|ref|XP_008463221.1| (PREDICTED: uncharacterized protein LOC103501412 isoform X3 [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 3.1e-65
Identity = 139/164 (84.76%), Postives = 142/164 (86.59%), Query Frame = 1


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60
           MELTLPTPLFVSIPK                      D+KLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPK---------------------TDMKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNK+SEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 143

The following BLAST results are available for this feature:

BLAST of CSPI01G13200 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G13200 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVE3_CUCSA	7.9e-84	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097700 PE=4 SV=1	[more]
B9HQM1_POPTR	1.2e-47	67.88	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s01400g PE=4 SV=1	[more]
F6GWA4_VITVI	3.8e-46	66.47	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00330 PE=4 SV=...	[more]
A0A067L693_JATCU	1.9e-45	66.06	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05463 PE=4 SV=1	[more]
V4RT28_9ROSI	7.2e-45	75.19	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029423mg PE=4 SV=1	[more]

BLAST of CSPI01G13200 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G45050.2	8.2e-40	58.90	unknown protein	[more]

BLAST of CSPI01G13200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459098\|ref\|XP_004147283.1\|	1.1e-83	100.00	PREDICTED: uncharacterized protein LOC101218484 isoform X1 [Cucumis sativus]	[more]
gi\|659072055\|ref\|XP_008463215.1\|	2.2e-79	95.73	PREDICTED: uncharacterized protein LOC103501412 isoform X2 [Cucumis melo]	[more]
gi\|659072053\|ref\|XP_008463206.1\|	2.7e-77	91.76	PREDICTED: uncharacterized protein LOC103501412 isoform X1 [Cucumis melo]	[more]
gi\|778659062\|ref\|XP_011653737.1\|	9.7e-67	86.59	PREDICTED: uncharacterized protein LOC101218484 isoform X2 [Cucumis sativus]	[more]
gi\|659072057\|ref\|XP_008463221.1\|	3.1e-65	84.76	PREDICTED: uncharacterized protein LOC103501412 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:0044723	single-organism carbohydrate metabolic process
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G13200.1	CSPI01G13200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37230	FAMILY NOT NAMED	coord: 35..163 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G13200	Cla005081	Watermelon (97103) v1	cpiwmB012
CSPI01G13200	Csa1G097700	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G13200	MELO3C004968	Melon (DHL92) v3.5.1	cpimeB011
CSPI01G13200	ClCG03G002650	Watermelon (Charleston Gray)	cpiwcgB040
CSPI01G13200	Lsi03G000010	Bottle gourd (USVL1VR-Ls)	cpilsiB046
CSPI01G13200	MELO3C004968.2	Melon (DHL92) v3.6.1	cpimedB011
CSPI01G13200	CsaV3_1G013380	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G13200	Cla97C03G053700	Watermelon (97103) v2	cpiwmbB034
CSPI01G13200	Bhi08G000219	Wax gourd	cpiwgoB049
CSPI01G13200	Cucsa.207690	Cucumber (Gy14) v1	cgycpiB327
CSPI01G13200	CmaCh01G005200	Cucurbita maxima (Rimu)	cmacpiB434
CSPI01G13200	CmoCh01G005510	Cucurbita moschata (Rifu)	cmocpiB425
CSPI01G13200	Cp4.1LG02g12700	Cucurbita pepo (Zucchini)	cpecpiB530
CSPI01G13200	CsGy1G013320	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G13200	Carg12297	Silver-seed gourd	carcpiB0477

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G13200	Cucurbita maxima (Rimu)	cmacpiB205
CSPI01G13200	Cucurbita moschata (Rifu)	cmocpiB192
CSPI01G13200	Cucurbita pepo (Zucchini)	cpecpiB518
CSPI01G13200	Silver-seed gourd	carcpiB1105
CSPI01G13200	Wax gourd	cpiwgoB017