CsaV3_1G013380 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G013380
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Chaperone DnaJ
Location	chr1 : 8661559 .. 8666185 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAAAGAAAAAGAAAAAAAAATCATAAAGCAAAATGCGTCGGTCTCTGCTGCTTCTTGAAAATATCTGTGAAAAGATAAGCAGGGACCCAAGACTTTGGGAGCGCCAAGCAACTACATACTGGAGTTTGTTTCTCAATGGAGCTAACTCTGCCTACCCCCTTGTTTGTCTCCATCCCCAAGAGTACGCTTTAATTCTTTATCTCATTTCCATTTCTCTGTTTCCCAATTCATATCATCACACACTTAACTTACCCATGTTTCCAATTTGGGTTTTTTCCAATTGAAGTTTATGCTCGAGACTCATATTAAGTTTCAGAGATTGATGTAATTCAATTATCCGTTCTTTCTCTCTCGTCTTTCTGCAAGAGGGGTTCAGTCAGTTTCTTTGTCTATATGCGGATTTTCAATGATTATGTGACTTTTGTTTTATTGGAGTTGTTTTGCATAATTTGGTTGTGCTGGACAGCTTTGAGAGACTAGACTTTGTTGGTCTGCTATTATTAATGTGATTGTTTAGTTGCTTACTCATCTATATTGTAGTTTAATCAAGATGAACATTGGTTGGCTGTTCGCTAGCAGTTTTTAGTTGTTTGAAACGTTTGGAATAAGACTCTTCAGTTATATGATGGTTGACAGTGAAGAGTGTTGTATCACATTGCTGGAATTAACGTCATATACTAGTTCATGATTAAGATCTTCTATATCTAGTAAATTATGGTGAAGGGAATATAACCAAATTTGCGAAATCTAGATCATAAAGTAGTGCAGTGTGCCACTCTTGAAGACATTGGTTTTGTATTGAGGGTGCTTTAAGAGCACTTTGTAAGTGCCTGTTGTCACGAGGAGAAGCCCTTTAGTTTCTCTTGAGGATGACAAGGTGTCATTGATGTTGTGATCCAGAACAATGTCTCAAATTCATGTGGAAGACACAATCTAAAGTTGCCTTTAGGAGGTTGTGGCATGTTATTTATGACATGCTGGCGGAGCCAGCTATTTGAAGGTGGTTGGTTGTTTAGAAAGTTTTCGTAGCTGTTACGTCGTAGTTCTTTTCGTTACATTCCATTAGAAGGCCACATTTGATGTGTGTGTGCTAGTGTCACAAATTGAACATGATCTATTTTTAGGAGGATGTGTGGTAGTTCTTTTACAACCTTACTTGAACATGATCTATTTTTTAGCTTGTACAACTGTGTCCTTGCGTTCTACCAACTAAATTTTATCTATAAGATGACCTTCCTCACCTAAGTGCTACTGCTGACTACCTTGGAACGAAACTCTGTATCTCATTTTGTTTAGCCACATATTTGGCTCTCCTCTTCCCAAAGTTCAACTTTAGTCGATTTCATCATTGATCCATTGCTCATGCTATTGAACAACTTTTTGTCAATTCCTTCGTAAGCATCCAATGTTTATTTGGGAATGCTTACGTAAGTGTTTACAAGCTTCAATATGACAAGTTGAAATTGTAGCAAAATCCGGGAGATCAGTCATTTTGATGCTTCTACTTGGTCCACCAATAGTTAATTATGATGCCTTTTTATACCCGTTCGTATATTTTCATCAATAAGTGTCCTACTGATAATTTACTTCACGTAGACCTCACTTTTTTTTCATTTATTTTATTTTTTTTTCCTTCCTTTTTATATTTCTGTTATTATTTTAACAGGTTATGCTCACAAGACCATCTTCTTTACCTGTTGCATTTAGAATTAAAAATTAGATTTGATAAATTTTATTAAATCATCTCTCTGAAATTAGGGGATAAAAATTTGTTGGTTAAAGCTCTAAAATCGAAACATGTGAGCAAACCATGCGTGAATTTATTATTTCTTTCCTCTAGACTTGTTAGTTCACACAGTGCTGTACTGGAATCTACATTATGAACTTATGCTATTACGTCAAAACTTTCTGCTGATTGGAATGCTGTTCATGTGAAGTCGTTAGGAATTCTAAACCCAACAACAATGGCCTTTGCTTGTTGGACTCCAATCCTCTTTCAGCTGATGTGAAACTACAAGGAGGAAGAAGAACATTGACTATAGCTTCTTCTCTACCTGAAACCGCTGCTTCTGTGGCAATTGCTGCTACAGTTGTAGGTGCAGCAGCCACCTTTCTTTCCAGAAGAAACAAAAATTCTGAGGCAGTGGAGGTGTGCTTTTACATATGAAACACTGTTTTTTGCCATTACCTTATTGTCAAGTTTCTGGAATCTGCATCTTGTCAGTTACACTGTTTTTGTGTCATTATCTAAGAAGCACGGGCACTTGCATTTAGCTTACATGTCCACGTACATGTTTGTTACTTGGACACTCCAACACTTGTTTGACACACATCAAATACTTGTTGGCACAATAGACATGTTAGACTTTAAAAGTTGGGTCAAATATTTGTTAGACATGTATCGAACACTTGTTTCATGCTAAATAGACACATAGTAGTTTAAGATAAAAATAATAAAATTTGAGGGTAAAATACATCAAGTTCATTTTTTAAGCATATAGATGCGCTTATTGGATTTGAATTTCTTTCTTATATAGAAAGGATATATATTTTAGACACTAAAAAGTGTTTTCTTATCATGTTCACATCCTATTTTTAAAATAATGTGTCACCATGTCTGTGTTATGTCTTACTCATGACTCAAGTTCATATTTGAGTTTCTTATCTACCAGATTTTGGTTATTGAACTACCCCTATGCTCAAATGCTTAAGTTGATATGTGCATTTGATCTTTTATTCATATTCTTAATAGAGTAGATTACTTGCGGACTTGAAAATCAACACAATACCTGAACCTGACTAGCAATATATTTTTAGGAAGAAATAGTGTTAAAGAGGTTCGTACATTGAATTTCCAGTCATAACATGCTAAATGGCCATTTTTCTTTTCTTTTGTGTCTTTTAAAGAAGCAATTGAATTGAAGTATGAAAATTATAAAAGGGAAGAAAGTTAAGTCTTGGGGCTTTTTAACCTAATGAATTTTTTTTTAAAGAAAATCCTTAATTCTTGCAATCTTTTAAAAATAATGAAACAGCCCCCTGGCTCAGGGCTTTAAGCCTTGGGGCTTCACAAAAGGCGTGTGCTTGAGGCACACCTTATTTAATGAGCCTCACCTTTCCAAGGCGAGGTTCTAGACCTGCCTTGAGCTAGGCACACGCCCAAAAGGGGTTTTTAAAGCACTAGGTCATCTTAAAGAGTTTTTACTTCTTTCTGAAAAGATGACCCAAAAGAGCAGTGGAGAGGAGAGCTTTTGGATTCTTTGGGAGAGCCAGAGACCAATTGAAAGCATATCCTTCTGAAAAGATGATGCACCGTTTGAGGATGTAAGATCATGGATGGGATCCTTCTTTGGAGCTCATTTTGCGTGTTTGTTGCCATATTTATCTTTCCATATATATAATATATATTTTAAAATCTCTTTTTAAGTACAACTTGAAGGTGGGGAAATTAGAACTTGGAACCTCTTGTCCTTGGGAACATACAGAAGCCAGTTAAGCTAAACTCATGTTGGCTTATCTCTCTATATTGCCTCTGTTAAAAGAGTTTGCAGAGCATCTCCCTTTTGTTCTGAATCACTAAACATGGATTTAGTGGAAAACATACCATTGGATTCCAAAAGGATTAAGGTGTAAGGCAGACAAGTAATTTTTTTTAAACAACAAATGTGGAGTATGGTGATTTGGACCTCTAACCTAGAAAGAATTACATGCCAATTAACTAAGCTAGGCTCATATTGCTTATGTTGGTGATAGAAAGTGGTTTAATTCTGCCTATTCGGCTATGTCCTCACTCTTAAGATTTTTTAGTTTTATGTTCCAAATGTCAAGATCTATTGGCAACAAATCCTTTACAGCAGCATTTTTCTGGTTTCCATAAACCTTACAGTACTACTACTAAACTCAAATATTTTAAATTGGTGTGGTTGTGTTACATTAGATCTTTTCTTTTCTACTGACTTATTTTGTGGATTGTCTGAAATTAATGCAATGGTTTCCCTTTAAATTTCAGGTTCCTTTGATAACATGCGAAGATTGTGGTGGTTCAGGCTTATGTTCTGAATGCAAAGGTGAAGGATTTGTGCTTAAGAAACTGTCAGATGAAAATGCAGAGCGGGCGAGGTTGGCTGCGAAGAATATGGCCACTCGATTCACCGCAGCGTATGATTTTCTTGACACACTCTCCTCTTTTTAGGAAGCTTCTACTTTCAACTAATAATCTGACTTTAATCTTTCTCAGGCTTCCTAAAAAATGGAGTTACTGTTCCAAGTGCTCTTCTGCTCGTTCTTGTAGTACTTGTGGTGGCAGTGGGACGTTGAACTCTTAGTTAGAAATTTTAATAAAGTGATGAATTCTTTACAAATGTACATGAGAGTTTAGATCACAAACGCTGGTCTTATTGTTTAAAGGAAATTTGACTTTGTTCTTTTATGAGTTTGCTGAATCAGTTTAGAGTTAAACATATTGTAAATATTAACATTGACAAATAGGTGAATCTAATGCACAAGTCTTACAATGTTAAAAACAACATGAAAGACAGCAAGTCAAATTAATTAAGAGAAAAATTACAATGATGTATCTATTTGCGTTAGACATTCTCTATATTGATTGTTAAATAGCTTATT

mRNA sequence

ATGGAGCTAACTCTGCCTACCCCCTTGTTTGTCTCCATCCCCAAGATCGTTAGGAATTCTAAACCCAACAACAATGGCCTTTGCTTGTTGGACTCCAATCCTCTTTCAGCTGATGTGAAACTACAAGGAGGAAGAAGAACATTGACTATAGCTTCTTCTCTACCTGAAACCGCTGCTTCTGTGGCAATTGCTGCTACAGTTGTAGGTGCAGCAGCCACCTTTCTTTCCAGAAGAAACAAAAATTCTGAGGCAGTGGAGGTTCCTTTGATAACATGCGAAGATTGTGGTGGTTCAGGCTTATGTTCTGAATGCAAAGGTGAAGGATTTGTGCTTAAGAAACTGTCAGATGAAAATGCAGAGCGGGCGAGGTTGGCTGCGAAGAATATGGCCACTCGATTCACCGCAGCGCTTCCTAAAAAATGGAGTTACTGTTCCAAGTGCTCTTCTGCTCGTTCTTGTAGTACTTGTGGTGGCAGTGGGACGTTGAACTCTTAG

Coding sequence (CDS)

ATGGAGCTAACTCTGCCTACCCCCTTGTTTGTCTCCATCCCCAAGATCGTTAGGAATTCTAAACCCAACAACAATGGCCTTTGCTTGTTGGACTCCAATCCTCTTTCAGCTGATGTGAAACTACAAGGAGGAAGAAGAACATTGACTATAGCTTCTTCTCTACCTGAAACCGCTGCTTCTGTGGCAATTGCTGCTACAGTTGTAGGTGCAGCAGCCACCTTTCTTTCCAGAAGAAACAAAAATTCTGAGGCAGTGGAGGTTCCTTTGATAACATGCGAAGATTGTGGTGGTTCAGGCTTATGTTCTGAATGCAAAGGTGAAGGATTTGTGCTTAAGAAACTGTCAGATGAAAATGCAGAGCGGGCGAGGTTGGCTGCGAAGAATATGGCCACTCGATTCACCGCAGCGCTTCCTAAAAAATGGAGTTACTGTTCCAAGTGCTCTTCTGCTCGTTCTTGTAGTACTTGTGGTGGCAGTGGGACGTTGAACTCTTAG

Protein sequence

MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS

Homology

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BLAST of CsaV3_1G013380 vs. NCBI nr
Match: XP_004147283.1 (PREDICTED: uncharacterized protein LOC101218484 isoform X1 [Cucumis sativus] >KGN64792.1 hypothetical protein Csa_1G097700 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 2.2e-83
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60
           MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 164

[Close]

BLAST of CsaV3_1G013380 vs. NCBI nr
Match: XP_008463215.1 (PREDICTED: uncharacterized protein LOC103501412 isoform X2 [Cucumis melo])

HSP 1 Score: 303.5 bits (776), Expect = 4.3e-79
Identity = 157/164 (95.73%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60
           MELTLPTPLFVSIPKIVR+SKPNN+GLCLL+S PLSAD+KLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPKIVRSSKPNNHGLCLLNSIPLSADMKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNK+SEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 164

[Close]

BLAST of CsaV3_1G013380 vs. NCBI nr
Match: XP_008463206.1 (PREDICTED: uncharacterized protein LOC103501412 isoform X1 [Cucumis melo])

HSP 1 Score: 296.6 bits (758), Expect = 5.3e-77
Identity = 156/170 (91.76%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MELTLPTPLFVSIPK------IVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSL 60
           MELTLPTPLFVSIPK      +VR+SKPNN+GLCLL+S PLSAD+KLQGGRRTLTIASSL
Sbjct: 1   MELTLPTPLFVSIPKKCSSCEVVRSSKPNNHGLCLLNSIPLSADMKLQGGRRTLTIASSL 60

Query: 61  PETAASVAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL 120
           PETAASVAIAATVVGAAATFLSRRNK+SEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL
Sbjct: 61  PETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL 120

Query: 121 SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Sbjct: 121 SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 170

[Close]

BLAST of CsaV3_1G013380 vs. NCBI nr
Match: XP_022998903.1 (uncharacterized protein LOC111493423 [Cucurbita maxima])

HSP 1 Score: 280.8 bits (717), Expect = 3.0e-72
Identity = 145/164 (88.41%), Postives = 153/164 (93.29%), Query Frame = 0


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60
           MELTLPTPLF S  KI+R+ KP N+GL L DSNP+SAD+KLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFASSSKIIRDPKPINHGLRLFDSNPISADLKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNK+SEA E+PL  CEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAEEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGG+GT NS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS 164

[Close]

BLAST of CsaV3_1G013380 vs. NCBI nr
Match: XP_022152827.1 (uncharacterized protein LOC111020449 [Momordica charantia])

HSP 1 Score: 280.4 bits (716), Expect = 3.9e-72
Identity = 145/164 (88.41%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60
           MELTLPTP   S PKI+R  KP N GLC LDSNPL ADVKLQGG+RTLT+ASSLPETAAS
Sbjct: 1   MELTLPTPFSTSFPKIIRGPKPINLGLCSLDSNPLLADVKLQGGKRTLTVASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAAT LSRRNK SEA E+PL TCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATLLSRRNKASEAEEIPLRTCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSC+TCGGSGTLNS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCTTCGGSGTLNS 164

[Close]

BLAST of CsaV3_1G013380 vs. TAIR10
Match: AT3G45050.2 (unknown protein)

HSP 1 Score: 160.6 bits (405), Expect = 8.2e-40
Identity = 96/163 (58.90%), Postives = 110/163 (67.48%), Query Frame = 0


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKL--QGGRRTLTIASSLPETA 60
           MEL+L      S P  V + K         D   L+ D+K   Q  +R+ T+  +L ETA
Sbjct: 1   MELSLIKLQSFSFPSSVSSVK---------DVRFLNLDLKSSHQRAKRSSTVVPALAETA 60

Query: 61  ASVAIAATVVGAAATFLSRR-NKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDE 120
            S+AIAATVVG AAT L RR NK SE  E  +  CE C GSG+C ECKGEGFVLKKLSD 
Sbjct: 61  VSIAIAATVVGTAATILVRRNNKASEEAEASMKECEACLGSGICPECKGEGFVLKKLSDA 120

Query: 121 NAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSG 161
           NAE+ARLAAKNMATR+TA LPKKWSYC+KCSS RSC  CGGSG
Sbjct: 121 NAEKARLAAKNMATRYTAGLPKKWSYCTKCSSTRSCMICGGSG 154

[Close]

BLAST of CsaV3_1G013380 vs. TrEMBL
Match: tr|A0A0A0LVE3|A0A0A0LVE3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097700 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.5e-83
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60
           MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 164

[Close]

BLAST of CsaV3_1G013380 vs. TrEMBL
Match: tr|A0A1S3CIP4|A0A1S3CIP4_CUCME (uncharacterized protein LOC103501412 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501412 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 2.9e-79
Identity = 157/164 (95.73%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60
           MELTLPTPLFVSIPKIVR+SKPNN+GLCLL+S PLSAD+KLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPKIVRSSKPNNHGLCLLNSIPLSADMKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNK+SEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 164

[Close]

BLAST of CsaV3_1G013380 vs. TrEMBL
Match: tr|A0A1S3CJ25|A0A1S3CJ25_CUCME (uncharacterized protein LOC103501412 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501412 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.5e-77
Identity = 156/170 (91.76%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MELTLPTPLFVSIPK------IVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSL 60
           MELTLPTPLFVSIPK      +VR+SKPNN+GLCLL+S PLSAD+KLQGGRRTLTIASSL
Sbjct: 1   MELTLPTPLFVSIPKKCSSCEVVRSSKPNNHGLCLLNSIPLSADMKLQGGRRTLTIASSL 60

Query: 61  PETAASVAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL 120
           PETAASVAIAATVVGAAATFLSRRNK+SEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL
Sbjct: 61  PETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL 120

Query: 121 SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Sbjct: 121 SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 170

[Close]

BLAST of CsaV3_1G013380 vs. TrEMBL
Match: tr|A0A1S3CJ40|A0A1S3CJ40_CUCME (uncharacterized protein LOC103501412 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103501412 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.0e-65
Identity = 139/164 (84.76%), Postives = 142/164 (86.59%), Query Frame = 0


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60
           MELTLPTPLFVSIPK                      D+KLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPK---------------------TDMKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNK+SEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 143

[Close]

BLAST of CsaV3_1G013380 vs. TrEMBL
Match: tr|A0A2K1Z0S6|A0A2K1Z0S6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G008400v3 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.6e-48
Identity = 115/165 (69.70%), Postives = 127/165 (76.97%), Query Frame = 0


Query: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSA-DVKLQ-GGRRTLTIASSLPETA 60
           MEL +    F S  K  R SKP   G  + D    S+ DVKLQ  GR+T T+  SLPETA
Sbjct: 1   MELAVHALSFTSFSK-NRESKP--QGRTIPDPATCSSIDVKLQEQGRKTSTVCYSLPETA 60

Query: 61  ASVAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDEN 120
           ASVAIAAT VGAA T L RRNK SEA E+PL TCEDCGGSG+CSEC GEGFVLKKLS+E+
Sbjct: 61  ASVAIAATAVGAAITLLVRRNKTSEADEIPLKTCEDCGGSGICSECSGEGFVLKKLSEES 120

Query: 121 AERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLN 164
           AERARL+AKNMATR+TA LPKKWSYC+KCSSARSCS CGGSG LN
Sbjct: 121 AERARLSAKNMATRYTAGLPKKWSYCTKCSSARSCSACGGSGKLN 162

The following BLAST results are available for this feature:

BLAST of CsaV3_1G013380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147283.1	2.2e-83	100.00	PREDICTED: uncharacterized protein LOC101218484 isoform X1 [Cucumis sativus] >KG...	[more]
XP_008463215.1	4.3e-79	95.73	PREDICTED: uncharacterized protein LOC103501412 isoform X2 [Cucumis melo]	[more]
XP_008463206.1	5.3e-77	91.76	PREDICTED: uncharacterized protein LOC103501412 isoform X1 [Cucumis melo]	[more]
XP_022998903.1	3.0e-72	88.41	uncharacterized protein LOC111493423 [Cucurbita maxima]	[more]
XP_022152827.1	3.9e-72	88.41	uncharacterized protein LOC111020449 [Momordica charantia]	[more]

BLAST of CsaV3_1G013380 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G45050.2	8.2e-40	58.90	unknown protein	[more]

BLAST of CsaV3_1G013380 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G013380 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LVE3\|A0A0A0LVE3_CUCSA	1.5e-83	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097700 PE=4 SV=1	[more]
tr\|A0A1S3CIP4\|A0A1S3CIP4_CUCME	2.9e-79	95.73	uncharacterized protein LOC103501412 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3CJ25\|A0A1S3CJ25_CUCME	3.5e-77	91.76	uncharacterized protein LOC103501412 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3CJ40\|A0A1S3CJ40_CUCME	4.0e-65	84.76	uncharacterized protein LOC103501412 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2K1Z0S6\|A0A2K1Z0S6_POPTR	2.6e-48	69.70	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G008400v3 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:0044723	single-organism carbohydrate metabolic process
biological_process	GO:0044763	single-organism cellular process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G013380.1	CsaV3_1G013380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37230	FAMILY NOT NAMED	coord: 38..163

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G013380	CSPI01G13200	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G013380	Cucsa.207690	Cucumber (Gy14) v1	cgycucB332
CsaV3_1G013380	CmaCh01G005200	Cucurbita maxima (Rimu)	cmacucB0518
CsaV3_1G013380	CmoCh01G005510	Cucurbita moschata (Rifu)	cmocucB0505
CsaV3_1G013380	Cp4.1LG02g12700	Cucurbita pepo (Zucchini)	cpecucB0657
CsaV3_1G013380	CsGy1G013320	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G013380	Carg12297	Silver-seed gourd	carcucB0474
CsaV3_1G013380	Cla005081	Watermelon (97103) v1	cucwmB015
CsaV3_1G013380	MELO3C004968	Melon (DHL92) v3.5.1	cucmeB010
CsaV3_1G013380	ClCG03G002650	Watermelon (Charleston Gray)	cucwcgB040
CsaV3_1G013380	Lsi03G000010	Bottle gourd (USVL1VR-Ls)	cuclsiB048
CsaV3_1G013380	MELO3C004968.2	Melon (DHL92) v3.6.1	cucmedB009
CsaV3_1G013380	Cla97C03G053700	Watermelon (97103) v2	cucwmbB032
CsaV3_1G013380	Bhi08G000219	Wax gourd	cucwgoB051

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G013380	Silver-seed gourd	carcucB0363
CsaV3_1G013380	Silver-seed gourd	carcucB1116
CsaV3_1G013380	Cucurbita maxima (Rimu)	cmacucB0234
CsaV3_1G013380	Cucurbita moschata (Rifu)	cmocucB0221
CsaV3_1G013380	Cucurbita pepo (Zucchini)	cpecucB0635
CsaV3_1G013380	Wax gourd	cucwgoB017