Carg09233 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTGCGTGACTCACTCCTCGTGCAATTGAGCTCTTCTAATGGAGTCGTCGTCTTCCTCGTTTTCATCTTTCGAGAATTCTTTTTCTCAATGGGATTATCTCAATCTATTCATACTACGCCCGATCCTTGCCGTCGTGTTCACGTTCTCCTTGATTTCTCTTGGTAATTTATTCTCCTTTCTCTTGATTATTTCGTGCAATTCCTGTATTTCTGATGTCTATTTCTGCTTAGGTTTTGTAATCGGAAGTCCGATCTCTATTTCTGTAGTATTTATTTAATCCTGCGCTGCACTGTTAATTGGAGTGATTGCGTAGGTTGGTTTTTGGCGTGGAAGCTCGTTCTTGTTCACGTCCCTCTGGTGCAAGAAATTTTTGGTTTGCGTAAGAAATCCGTCAAACCGAAGCCTCCAACCCGCCGACTATCGAAATTTTATAATAATTTGGATTCCCAAACTTCAGCTTCTGGCTGGTGAGTTCTTTTTGTTGTCGTTGTTTTATACCTGCAATTTGTTTGCTAAGCTCATCTGGAATTGTTTACTAAGGTTTAACCGTCGAATGTGAAATTTGTATTCGTCTTCTGTTATTATACTTTTCTTCCATGTGAAATCTCATATCAGAAATTTGATCACCTTGTAACTTAATTACATGGAAGGGGAAAAAAGTACAAAAATCAACGCCACTCATGAAGAGTCGCTATCTTGGTTTCTTTCATCTGCTGGAAGATTCTTCTTGTCGTGTATTTATGTGCTTGAGGTGATCGGTATAATATAGATGTTTGTGTATCCTGCTTCATGCAATACCGAGTATAGAAGGGAAGATCATGATAACATTATCATTTTCTTAGAGAATATTATCTCTGCATGTTTTATTTTGCCTTGCCTGCCCATGATCTGCGTTTAGAGCGCAAATATGAGCATGTAGACCGTATTCTTTTGTTAGACAATTTCAAGTATACTGCTTTTGGGCTCCCAATGTGGCACGAGTTTGGGGTTTCTTAATATTTAGATATCCAGAATAGGCTTTAGCATATATGATTACAAGAACACCATTCTATTTTCTGTGATATAGATAAAATCCTCAACTTTATTTACTAAAGATAGAATTTTGAACTCGATCTTTTGTCATCCATCTTGCAACCAATTTGGTTGTGAAACGTACGAACCATCTTCCTTCCACATGCCCCATCTTGGAGTCTACCATTACCATGTGCACATTACAACTTATCTACCAGCCAATCTTGGTCGTGCACTTATCTTGCCTACCATCTTTGTGAAATCTCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTACAAGGGTGTGGAAACCTCTCCCTAACAGACGCGTTTTAAAACTTTGAGGTGAAGCCCGAGAAGGAAAAACCCAAAGAGGACAATTTCTGCTAGCTGTGGGTTTGGGCCGTTATAATCTTGCAACTCATCTCGTCTGTTTCCTCCGTGGCTTTCACAATCATTTCCCTATCACTATTCTTTTGCAGTGCTCTCTTTTCCAAATTTCAACATCTCAGTCCAGCACTACCTTTTTGTATAGGAATAAATGTAGTTTCACTAAGCAAAAAACCGATGCTTGTATTCAGTAAAAAGTAGATCAAAGTCTTATACCATTCTTTTTTGGGTTTGTTTCGGTTAAATCCCTCATTTTTCACTTCTATATTGTTCCCGTTGATGACACTTCTTCCAAGATGATGTTTTTACTGATAAATGTTATCTGATCACCCATGGATATTTGTTGGATAGTGCAGAAACAACTAAATTTTGGCCTCAGTAATAGATAGGTTTTCTGTCGACAGATGTATGTTTTGAGCTTGGAGGCCATCTTAACTGAAATGTAGAATGTAAACCCAAAAGAAATAGTGCAGTATTGGCCAATTGTTTGAGATGTGTATAGCTCAAAGTGAAAGTTCACTTAGGAATGCACGTTTTCTGCCAGAACGACGTTCTGACCGAAAATAAGACTAATTACATCTATTAAACGACTCCTGTATATAGTACAAGTTTTAAGTCGATTTGGAATTACTTCTCAAGTGCTTAAAAATACTTAAAAAGTTGTTCCAAACAAGCCCTTTTAATGCTTGAATTGTTTGATAGTTTGATAGTTTGATCAAATGAAGGTGGAACAATGTCAAGATCTTGACCACCAAGCCTTGATGATTTGTTGGAATGAACAGTAATTATGGTTGCTATAGCCTTGATGATTTTTAAAATTGCTTTTCAGATGACTGTGATGGTGATTGCCTCATCGAGTTCTGACATGAGCAATGGCTTATGCTTTGTTTTATTGTGACTGTAAATTCGGGTTACTCGAGTTCTTCAAGTTGTATATATTCACCTCTCTTCTCAATTTCAAAGTCTTTACTCCTGTAAATTTGGGTTACTTGTATTTGTTGGACTAGTTATGGCTATTTTATCTTCATAAAGTTCTTTTTTTTTTCATTATTAATTGAGTTTATTCTTAAAGAAACTATGAATAGCATTTATTCGAAAAGGCGGGCTGTTACGGTACGAGTGTGATTGTGGGGTTTTGTCGTCATTTGGATTGGGGTGGAGTGCTCTGGTTTGTGAGTTTCCCAGGTTGGTTTAGTAATTAGGGGTCGTCTTGAGATTGATTGAAAAGGCAGCCCAGCTGCCCCTCTCCTTAGTCGCCTACCTACTCGTGCTCGTAACTCGATCAGAGGTCAACAAGT GATTGCGTGACTCACTCCTCGTGCAATTGAGCTCTTCTAATGGAGTCGTCGTCTTCCTCGTTTTCATCTTTCGAGAATTCTTTTTCTCAATGGGATTATCTCAATCTATTCATACTACGCCCGATCCTTGCCGTCGTGTTCACGTTCTCCTTGATTTCTCTTGGTTGGTTTTTGGCGTGGAAGCTCGTTCTTGTTCACGTCCCTCTGGTGCAAGAAATTTTTGGTTTGCGTAAGAAATCCGTCAAACCGAAGCCTCCAACCCGCCGACTATCGAAATTTTATAATAATTTGGATTCCCAAACTTCAGCTTCTGGCTGATGACTGTGATGGTGATTGCCTCATCGAGTTCTGACATGAGCAATGGCTTATGCTTTGTTTTATTGTGACTGTAAATTCGGGTTACTCGAGTTCTTCAAGTTGTATATATTCACCTCTCTTCTCAATTTCAAAGTCTTTACTCCTGTAAATTTGGGTTACTTGTATTTGTTGGACTAGTTATGGCTATTTTATCTTCATAAAGTTCTTTTTTTTTTCATTATTAATTGAGTTTATTCTTAAAGAAACTATGAATAGCATTTATTCGAAAAGGCGGGCTGTTACGGTACGAGTGTGATTGTGGGGTTTTGTCGTCATTTGGATTGGGGTGGAGTGCTCTGGTTTGTGAGTTTCCCAGGTTGGTTTAGTAATTAGGGGTCGTCTTGAGATTGATTGAAAAGGCAGCCCAGCTGCCCCTCTCCTTAGTCGCCTACCTACTCGTGCTCGTAACTCGATCAGAGGTCAACAAGT ATGGAGTCGTCGTCTTCCTCGTTTTCATCTTTCGAGAATTCTTTTTCTCAATGGGATTATCTCAATCTATTCATACTACGCCCGATCCTTGCCGTCGTGTTCACGTTCTCCTTGATTTCTCTTGGTTGGTTTTTGGCGTGGAAGCTCGTTCTTGTTCACGTCCCTCTGGTGCAAGAAATTTTTGGTTTGCGTAAGAAATCCGTCAAACCGAAGCCTCCAACCCGCCGACTATCGAAATTTTATAATAATTTGGATTCCCAAACTTCAGCTTCTGGCTGA MESSSSSFSSFENSFSQWDYLNLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG
BLAST of Carg09233 vs. NCBI nr
Match: XP_022961695.1 (uncharacterized protein LOC111462391 isoform X2 [Cucurbita moschata] >XP_022961696.1 uncharacterized protein LOC111462391 isoform X3 [Cucurbita moschata]) HSP 1 Score: 176.8 bits (447), Expect = 3.4e-41 Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of Carg09233 vs. NCBI nr
Match: XP_022961694.1 (uncharacterized protein LOC111462391 isoform X1 [Cucurbita moschata]) HSP 1 Score: 176.8 bits (447), Expect = 3.4e-41 Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of Carg09233 vs. NCBI nr
Match: XP_023545613.1 (uncharacterized protein LOC111804995 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545614.1 uncharacterized protein LOC111804995 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 175.3 bits (443), Expect = 9.9e-41 Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0
BLAST of Carg09233 vs. NCBI nr
Match: XP_022997299.1 (uncharacterized protein LOC111492244 isoform X2 [Cucurbita maxima] >XP_022997300.1 uncharacterized protein LOC111492244 isoform X3 [Cucurbita maxima]) HSP 1 Score: 173.3 bits (438), Expect = 3.8e-40 Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0
BLAST of Carg09233 vs. NCBI nr
Match: XP_022997298.1 (uncharacterized protein LOC111492244 isoform X1 [Cucurbita maxima]) HSP 1 Score: 173.3 bits (438), Expect = 3.8e-40 Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0
BLAST of Carg09233 vs. TAIR10
Match: AT1G36380.1 (unknown protein) HSP 1 Score: 82.8 bits (203), Expect = 1.2e-16 Identity = 41/65 (63.08%), Postives = 52/65 (80.00%), Query Frame = 0
BLAST of Carg09233 vs. TrEMBL
Match: tr|A0A0A0KH75|A0A0A0KH75_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G399720 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 7.0e-35 Identity = 80/92 (86.96%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of Carg09233 vs. TrEMBL
Match: tr|A0A1S3BCI8|A0A1S3BCI8_CUCME (uncharacterized protein LOC103488423 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488423 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.0e-33 Identity = 78/92 (84.78%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Carg09233 vs. TrEMBL
Match: tr|A0A1S3BC25|A0A1S3BC25_CUCME (uncharacterized protein LOC103488423 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103488423 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.0e-33 Identity = 78/92 (84.78%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Carg09233 vs. TrEMBL
Match: tr|A0A1S3BDD8|A0A1S3BDD8_CUCME (uncharacterized protein LOC103488423 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488423 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.0e-33 Identity = 78/92 (84.78%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Carg09233 vs. TrEMBL
Match: tr|A0A2I4DYK4|A0A2I4DYK4_9ROSI (uncharacterized protein LOC108984653 isoform X2 OS=Juglans regia OX=51240 GN=LOC108984653 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 3.5e-26 Identity = 66/91 (72.53%), Postives = 78/91 (85.71%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|