CmaCh05G004770 (gene) Cucurbita maxima (Rimu)

NameCmaCh05G004770
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTransmembrane protein, putative
LocationCma_Chr05 : 2245960 .. 2248453 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCACTCCTCGTGCAATTGAGCTCTTCTAATGGAGTCGTCGTCTTCCTCGTTTTCATCTTTCGAGAATTCTCTTTCTCAATGGGATTATCTCAGTCTATTCATATTACGCCCGATCCTTGCCGTTGTGTTCACGTTCTCCTTGATTTCTCTTGGTAATTTATTCTCCTTTCCCTTGATTATTTCGTGCAATTCCTGTATTTCTGATGTCTATTTCTACTTATGTTTTGTAATCGGAAATCCGATCTCTATTTCTGTAGTATTTATTTAATCCTGCGCTGCACTGTTAATTGGAGTGATTGCGTAGGTTGGTTTTTGGCGTGGAAGCTCGTTCTTGTTCACGTCCCTCTGGTGCAAGAAATTTTTGGTTTGCGTAAGAAATCAGTCAAGCCGAAGCCTCCAACCCGCCGACTATCGAAATTTTATAATAATTTGGATTCCCAAACTTCAGCATCTGGCTGGTGAGTTCTTTTTGTTGTCGTTGTTTTATACCTGCAATTTGTTTGCTAAGCTCATCTGGAATTGTTTACTAAGGTTTAACCGTCGAATGGGAAATTTGTATTCGTCTTGTGTTATTACACTTTACTTCCATGTGAAATCTCATATCAGAAACTTGGTCACCTTGTAACTTAATTACATGGAAGGGGAAAAAAGTACAAAAATCAACGCCACTCATCAAGAGTCGCTGTCTTGGTTTCTTTCATCTGCTGGAAGATTCTTCTTGTCGTGTATTATGTGCTTGAGGTGATCGGTATAATATAGATGTTTGTGTGTCCTGCTTCATGCAATACCGAGTATAGAAGGGAAGATCATGGTAACATTATCATTTTCTTAGAGAATATTATCTCTGCATGTTTTATTTTGCCTTGCCTGCCCATGTGTCTGCGTTTAGGGCGCAAATATGAGCATGCAGACCGTATTCTTTTGTTAGACAATTTCAAGTATACTGCTTTTGGGCTCCCCAATGTGGCACGAGTTTGGGTTTTCTTAATATTTAGATATCCAGAATAGGCTTTAGCATATATGATTACAAGAACACCGTTGGATTTTCTGTGATATAGATAAAATCCTCAACTTTATTTACTAAAGATAGAATTTTGAACTCAATCTTTCGTCATCCATCTTGCAACCAATTCGGTTGTGAAATGAACGAACCATCTTCCTCTTGGAGTCTACCATTCCCATGTGCACATTACAACGTATCTACTAGCCAATCTTGGTCGTGCACTTATCTTGCCTACCATCTTTGTGAAATCCCACATCGGTTGGGGAGGAGAATGAAACATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGATGCGTTTTAAAATTTTGAAGACAATTTCTGCTAGGGTGAGTTTGGACTGTTACAATCTTGCAACTCATCTCGTCACTGTTTCCTCCGTGGCTTTCACAATCATTTCCCTATCACTTTTCTTTTGCAGTGCTCTCTTTCCCAAATTTCAACATCTCCCAGACTAGCCAATACCTTTTTGTATAGGAATAAATGTAGTTTCATAAGCAAAAAACTGACGCTTGTATTCAATGAAAAGTAGATCAAAGTCTTGTACCATTATTTTTTGGGTTTGTTTCGTTGAAATCCCTCATTTTTCACTTCTATGTTTTTCCCGGTGATGACACTTCTTCCAAGATGATGTTTTTACTGATAAATGTTATCTGATCACCCATGTATATTTGTTGGATAGTGCAGAAACAACTAAATTTTGGCCTCAGTAATAGATAGGTTTTCTGTCGACAGATGTATGTTTTGAGCTTGGAGGCCATCTTAACTGAAATGCAGAACGTAAACCCAAAAGAAATAGTGCAGTATTGGCCAATTGTTTGAGATGTGTATAGCTCATAGTGAAAGTTCATTTAGGAATGCACGTTTTCTGCCACAACGACGTTCTGACAGAAAATAGGACTAACTACATCTATTAAACTACTCATGTATATATAGTACAAGTTTTAAGTCGATTTGGAATTACTTCTCAAGTGCTTAAAAATTCTTAAAAAGTTGTTCCAAACAAGCCCTTTTAATGCTTGAATTGTTTGATAGTTTAATCAAATGAAGATTGAACAATGTCAAGATCTTGACCACCAAGTCTTGACGATTTGTTGGAATGAACAGTAATTATGGTTGCTATAGCCTTGATGATTTTTAAAATTGCTTTTCAGATGACCGTGATGGTGATTACCTCATTGAGTTCTGACATGAGCAATGGCTTATGCTTTGTTTTATTGTGACTGTAAATTCGGGTTACTCGAGTTCTTCAAGTTGTATATATTCACCTCTCTTCTCAATTTCAAAGTCTTTACTCTTTTCATTGTTACCTGTAAATTTGGGTTACTTGTATTTGTTGGACTAGTTATGGCTATTTTATCTTCATAAAGTTTTTTTTTTTCATTATTAATTGAGTTCATTCTCAAAGAAACTGTGAATAGCATTTATTCAAAAAGTCGGGCTGTTATGGTACGTTGAGTGTGATTGTGG

mRNA sequence

TCACTCCTCGTGCAATTGAGCTCTTCTAATGGAGTCGTCGTCTTCCTCGTTTTCATCTTTCGAGAATTCTCTTTCTCAATGGGATTATCTCAGTCTATTCATATTACGCCCGATCCTTGCCGTTGTGTTCACGTTCTCCTTGATTTCTCTTGGTTGGTTTTTGGCGTGGAAGCTCGTTCTTGTTCACGTCCCTCTGGTGCAAGAAATTTTTGGTTTGCGTAAGAAATCAGTCAAGCCGAAGCCTCCAACCCGCCGACTATCGAAATTTTATAATAATTTGGATTCCCAAACTTCAGCATCTGGCTGATGACCGTGATGGTGATTACCTCATTGAGTTCTGACATGAGCAATGGCTTATGCTTTGTTTTATTGTGACTGTAAATTCGGGTTACTCGAGTTCTTCAAGTTGTATATATTCACCTCTCTTCTCAATTTCAAAGTCTTTACTCTTTTCATTGTTACCTGTAAATTTGGGTTACTTGTATTTGTTGGACTAGTTATGGCTATTTTATCTTCATAAAGTTTTTTTTTTTCATTATTAATTGAGTTCATTCTCAAAGAAACTGTGAATAGCATTTATTCAAAAAGTCGGGCTGTTATGGTACGTTGAGTGTGATTGTGG

Coding sequence (CDS)

ATGGAGTCGTCGTCTTCCTCGTTTTCATCTTTCGAGAATTCTCTTTCTCAATGGGATTATCTCAGTCTATTCATATTACGCCCGATCCTTGCCGTTGTGTTCACGTTCTCCTTGATTTCTCTTGGTTGGTTTTTGGCGTGGAAGCTCGTTCTTGTTCACGTCCCTCTGGTGCAAGAAATTTTTGGTTTGCGTAAGAAATCAGTCAAGCCGAAGCCTCCAACCCGCCGACTATCGAAATTTTATAATAATTTGGATTCCCAAACTTCAGCATCTGGCTGA

Protein sequence

MESSSSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG
BLAST of CmaCh05G004770 vs. TrEMBL
Match: A0A0A0KH75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G399720 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 8.4e-35
Identity = 80/92 (86.96%), Postives = 87/92 (94.57%), Query Frame = 1

Query: 1  MESSSSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEI 60
          MESSSSSFSSFE SLS WDYL+L+ILRPILA++FTFSLISLGWFLAWKLVLVHVPLVQEI
Sbjct: 1  MESSSSSFSSFEYSLSHWDYLNLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEI 60

Query: 61 FGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG 93
          FGLRKK  K KPPTRRLSKFY++L+SQTSASG
Sbjct: 61 FGLRKKPAKSKPPTRRLSKFYDSLNSQTSASG 92

BLAST of CmaCh05G004770 vs. TrEMBL
Match: A0A061FGG1_THECC (Uncharacterized protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_035000 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.0e-24
Identity = 63/91 (69.23%), Postives = 78/91 (85.71%), Query Frame = 1

Query: 1   MESSSSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEI 60
           MESSSSS SS  N LS W+YL+L ++RPI+A+ F  S I L W+LAWKLVLVHVPLVQEI
Sbjct: 29  MESSSSSTSS--NFLSFWNYLNLLLVRPIIAIFFVLSFIFLWWWLAWKLVLVHVPLVQEI 88

Query: 61  FGLRKKSVKPKPPTRRLSKFYNNLDSQTSAS 92
           FGLRKK VKPKPPTRRLS++YN++++Q+S+S
Sbjct: 89  FGLRKKPVKPKPPTRRLSRYYNSINAQSSSS 117

BLAST of CmaCh05G004770 vs. TrEMBL
Match: A0A061FNP2_THECC (Uncharacterized protein isoform 5 (Fragment) OS=Theobroma cacao GN=TCM_035000 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.0e-24
Identity = 63/91 (69.23%), Postives = 78/91 (85.71%), Query Frame = 1

Query: 1  MESSSSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEI 60
          MESSSSS SS  N LS W+YL+L ++RPI+A+ F  S I L W+LAWKLVLVHVPLVQEI
Sbjct: 1  MESSSSSTSS--NFLSFWNYLNLLLVRPIIAIFFVLSFIFLWWWLAWKLVLVHVPLVQEI 60

Query: 61 FGLRKKSVKPKPPTRRLSKFYNNLDSQTSAS 92
          FGLRKK VKPKPPTRRLS++YN++++Q+S+S
Sbjct: 61 FGLRKKPVKPKPPTRRLSRYYNSINAQSSSS 89

BLAST of CmaCh05G004770 vs. TrEMBL
Match: A0A061FHH4_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_035000 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.0e-24
Identity = 63/91 (69.23%), Postives = 78/91 (85.71%), Query Frame = 1

Query: 1  MESSSSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEI 60
          MESSSSS SS  N LS W+YL+L ++RPI+A+ F  S I L W+LAWKLVLVHVPLVQEI
Sbjct: 1  MESSSSSTSS--NFLSFWNYLNLLLVRPIIAIFFVLSFIFLWWWLAWKLVLVHVPLVQEI 60

Query: 61 FGLRKKSVKPKPPTRRLSKFYNNLDSQTSAS 92
          FGLRKK VKPKPPTRRLS++YN++++Q+S+S
Sbjct: 61 FGLRKKPVKPKPPTRRLSRYYNSINAQSSSS 89

BLAST of CmaCh05G004770 vs. TrEMBL
Match: W9S1C6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007383 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.5e-23
Identity = 60/87 (68.97%), Postives = 71/87 (81.61%), Query Frame = 1

Query: 5  SSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLR 64
          +SSFS  E +LS+WDYL+L +LRP LA+ F   LI LGW  AWKLVLVHVPLVQEIFGLR
Sbjct: 3  ASSFS--ELALSRWDYLNLLVLRPALAIAFVLFLIFLGWLSAWKLVLVHVPLVQEIFGLR 62

Query: 65 KKSVKPKPPTRRLSKFYNNLDSQTSAS 92
          KK+ KPKPP+RRLSK YN +D++ SAS
Sbjct: 63 KKNAKPKPPSRRLSKIYNTIDARNSAS 87

BLAST of CmaCh05G004770 vs. TAIR10
Match: AT1G36380.1 (AT1G36380.1 unknown protein)

HSP 1 Score: 82.4 bits (202), Expect = 1.6e-16
Identity = 41/65 (63.08%), Postives = 52/65 (80.00%), Query Frame = 1

Query: 24 FILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKSVKPKPPTR-RLSKFYN 83
          F++RP+LA+ F    I+L WFLAWKLVL HVPLVQEIFGLRKK+  PKP +R R++KFY 
Sbjct: 15 FLIRPLLAISFVICFIALWWFLAWKLVLSHVPLVQEIFGLRKKTFIPKPESRGRIAKFYK 74

Query: 84 NLDSQ 88
          ++ SQ
Sbjct: 75 SISSQ 79

BLAST of CmaCh05G004770 vs. NCBI nr
Match: gi|778715738|ref|XP_011657443.1| (PREDICTED: uncharacterized protein LOC101215134 isoform X1 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-34
Identity = 80/92 (86.96%), Postives = 87/92 (94.57%), Query Frame = 1

Query: 1  MESSSSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEI 60
          MESSSSSFSSFE SLS WDYL+L+ILRPILA++FTFSLISLGWFLAWKLVLVHVPLVQEI
Sbjct: 1  MESSSSSFSSFEYSLSHWDYLNLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEI 60

Query: 61 FGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG 93
          FGLRKK  K KPPTRRLSKFY++L+SQTSASG
Sbjct: 61 FGLRKKPAKSKPPTRRLSKFYDSLNSQTSASG 92

BLAST of CmaCh05G004770 vs. NCBI nr
Match: gi|659089177|ref|XP_008445367.1| (PREDICTED: uncharacterized protein LOC103488423 isoform X2 [Cucumis melo])

HSP 1 Score: 151.8 bits (382), Expect = 6.0e-34
Identity = 79/92 (85.87%), Postives = 85/92 (92.39%), Query Frame = 1

Query: 1  MESSSSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEI 60
          MESSSSSF SFE SLS WDYL L+ILRPILA++FTFSLISLGWFLAWKLVLVHVPLVQEI
Sbjct: 1  MESSSSSFPSFEYSLSHWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEI 60

Query: 61 FGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG 93
          FGLRKK  K KPPTRRLSKFY++L+SQTSASG
Sbjct: 61 FGLRKKPAKSKPPTRRLSKFYDSLNSQTSASG 92

BLAST of CmaCh05G004770 vs. NCBI nr
Match: gi|659089179|ref|XP_008445368.1| (PREDICTED: uncharacterized protein LOC103488423 isoform X3 [Cucumis melo])

HSP 1 Score: 151.8 bits (382), Expect = 6.0e-34
Identity = 79/92 (85.87%), Postives = 85/92 (92.39%), Query Frame = 1

Query: 1  MESSSSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEI 60
          MESSSSSF SFE SLS WDYL L+ILRPILA++FTFSLISLGWFLAWKLVLVHVPLVQEI
Sbjct: 1  MESSSSSFPSFEYSLSHWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEI 60

Query: 61 FGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG 93
          FGLRKK  K KPPTRRLSKFY++L+SQTSASG
Sbjct: 61 FGLRKKPAKSKPPTRRLSKFYDSLNSQTSASG 92

BLAST of CmaCh05G004770 vs. NCBI nr
Match: gi|659089174|ref|XP_008445365.1| (PREDICTED: uncharacterized protein LOC103488423 isoform X1 [Cucumis melo])

HSP 1 Score: 151.8 bits (382), Expect = 6.0e-34
Identity = 79/92 (85.87%), Postives = 85/92 (92.39%), Query Frame = 1

Query: 1  MESSSSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEI 60
          MESSSSSF SFE SLS WDYL L+ILRPILA++FTFSLISLGWFLAWKLVLVHVPLVQEI
Sbjct: 1  MESSSSSFPSFEYSLSHWDYLDLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEI 60

Query: 61 FGLRKKSVKPKPPTRRLSKFYNNLDSQTSASG 93
          FGLRKK  K KPPTRRLSKFY++L+SQTSASG
Sbjct: 61 FGLRKKPAKSKPPTRRLSKFYDSLNSQTSASG 92

BLAST of CmaCh05G004770 vs. NCBI nr
Match: gi|1009136541|ref|XP_015885581.1| (PREDICTED: uncharacterized protein LOC107420988 [Ziziphus jujuba])

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-26
Identity = 68/88 (77.27%), Postives = 75/88 (85.23%), Query Frame = 1

Query: 5  SSSFSSFENSLSQWDYLSLFILRPILAVVFTFSLISLGWFLAWKLVLVHVPLVQEIFGLR 64
          SSS SS E S S WDYLSLF+LRP+ AV+F F LISLGW LAWKLVLVHVPLVQEIFGLR
Sbjct: 3  SSSLSS-EASFSPWDYLSLFLLRPVSAVLFVFLLISLGWLLAWKLVLVHVPLVQEIFGLR 62

Query: 65 KKSVKPKPPTRRLSKFYNNLDSQTSASG 93
          KK VKPKP TRRLSK Y+N+DS+ +ASG
Sbjct: 63 KKPVKPKPLTRRLSKIYSNIDSRKNASG 89

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KH75_CUCSA8.4e-3586.96Uncharacterized protein OS=Cucumis sativus GN=Csa_6G399720 PE=4 SV=1[more]
A0A061FGG1_THECC3.0e-2469.23Uncharacterized protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_035000 PE... [more]
A0A061FNP2_THECC3.0e-2469.23Uncharacterized protein isoform 5 (Fragment) OS=Theobroma cacao GN=TCM_035000 PE... [more]
A0A061FHH4_THECC3.0e-2469.23Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_035000 PE=4 SV=1[more]
W9S1C6_9ROSA2.5e-2368.97Uncharacterized protein OS=Morus notabilis GN=L484_007383 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G36380.11.6e-1663.08 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778715738|ref|XP_011657443.1|1.2e-3486.96PREDICTED: uncharacterized protein LOC101215134 isoform X1 [Cucumis sativus][more]
gi|659089177|ref|XP_008445367.1|6.0e-3485.87PREDICTED: uncharacterized protein LOC103488423 isoform X2 [Cucumis melo][more]
gi|659089179|ref|XP_008445368.1|6.0e-3485.87PREDICTED: uncharacterized protein LOC103488423 isoform X3 [Cucumis melo][more]
gi|659089174|ref|XP_008445365.1|6.0e-3485.87PREDICTED: uncharacterized protein LOC103488423 isoform X1 [Cucumis melo][more]
gi|1009136541|ref|XP_015885581.1|2.7e-2677.27PREDICTED: uncharacterized protein LOC107420988 [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G004770.1CmaCh05G004770.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37192FAMILY NOT NAMEDcoord: 4..91
score: 7.2
NoneNo IPR availablePANTHERPTHR37192:SF1SUBFAMILY NOT NAMEDcoord: 4..91
score: 7.2