Carg05117 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCCTGGATAACCATCTGTTTGGTTACCAAGAAAATTTTGAAAATTTTCCCGGAAAACAGAATTCCCATCTCTCATTTCACTTCAATTACTTGGAAGAGATGTTGTTTGCCGACATGTCGTTATCGTCATCGTCATCGTCGTCTGATTCGAGCCCTTGTTTGTCTCCGGAGATGCACGTTAAGGAGGAGATAGAAGACGGCGATATCATCGTGCAAGACGCTCAGACACAGAAGGAGGAGAGGGCTTATAGAGGGGTGCGGCGGAGGCCGTGGGGGAAGTACGCAGCCGAGATAAGAGACTCGACTCGACAAGGGGTGAGGGTTTGGTTGGGGACGTTTGATAGTGCGGAGGCTGCAGCATTGGCTTATGACCAAGCCGCATTTTGCATGAGAGGTGCATTAGCCACACTCAATTTTCCGGTGGAGGTTGTTCGAGAGTCGCTCTATGAAATGAAGTATCGGTGGGAAGTCGGGTGTTCGCCTGTCTTGGCGCTCAAACGACGTCACACGATACGGAGGAAGAAGATGGCAGAAGCCGAGAAGATGGAGAAGAAGATGAAGAAGAAGAAAAATGTAGTTGTTTTTGAGGATTTGGGTGTCGAGTACTTAGAAGAACTCTTAAGTTTGACTTCTTAA ATGTCCCTGGATAACCATCTGTTTGGTTACCAAGAAAATTTTGAAAATTTTCCCGGAAAACAGAATTCCCATCTCTCATTTCACTTCAATTACTTGGAAGAGATGTTGTTTGCCGACATGTCGTTATCGTCATCGTCATCGTCGTCTGATTCGAGCCCTTGTTTGTCTCCGGAGATGCACGTTAAGGAGGAGATAGAAGACGGCGATATCATCGTGCAAGACGCTCAGACACAGAAGGAGGAGAGGGCTTATAGAGGGGTGCGGCGGAGGCCGTGGGGGAAGTACGCAGCCGAGATAAGAGACTCGACTCGACAAGGGGTGAGGGTTTGGTTGGGGACGTTTGATAGTGCGGAGGCTGCAGCATTGGCTTATGACCAAGCCGCATTTTGCATGAGAGGTGCATTAGCCACACTCAATTTTCCGGTGGAGGTTGTTCGAGAGTCGCTCTATGAAATGAAGTATCGGTGGGAAGTCGGGTGTTCGCCTGTCTTGGCGCTCAAACGACGTCACACGATACGGAGGAAGAAGATGGCAGAAGCCGAGAAGATGGAGAAGAAGATGAAGAAGAAGAAAAATGTAGTTGTTTTTGAGGATTTGGGTGTCGAGTACTTAGAAGAACTCTTAAGTTTGACTTCTTAA ATGTCCCTGGATAACCATCTGTTTGGTTACCAAGAAAATTTTGAAAATTTTCCCGGAAAACAGAATTCCCATCTCTCATTTCACTTCAATTACTTGGAAGAGATGTTGTTTGCCGACATGTCGTTATCGTCATCGTCATCGTCGTCTGATTCGAGCCCTTGTTTGTCTCCGGAGATGCACGTTAAGGAGGAGATAGAAGACGGCGATATCATCGTGCAAGACGCTCAGACACAGAAGGAGGAGAGGGCTTATAGAGGGGTGCGGCGGAGGCCGTGGGGGAAGTACGCAGCCGAGATAAGAGACTCGACTCGACAAGGGGTGAGGGTTTGGTTGGGGACGTTTGATAGTGCGGAGGCTGCAGCATTGGCTTATGACCAAGCCGCATTTTGCATGAGAGGTGCATTAGCCACACTCAATTTTCCGGTGGAGGTTGTTCGAGAGTCGCTCTATGAAATGAAGTATCGGTGGGAAGTCGGGTGTTCGCCTGTCTTGGCGCTCAAACGACGTCACACGATACGGAGGAAGAAGATGGCAGAAGCCGAGAAGATGGAGAAGAAGATGAAGAAGAAGAAAAATGTAGTTGTTTTTGAGGATTTGGGTGTCGAGTACTTAGAAGAACTCTTAAGTTTGACTTCTTAA MSLDNHLFGYQENFENFPGKQNSHLSFHFNYLEEMLFADMSLSSSSSSSDSSPCLSPEMHVKEEIEDGDIIVQDAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKRRHTIRRKKMAEAEKMEKKMKKKKNVVVFEDLGVEYLEELLSLTS
BLAST of Carg05117 vs. NCBI nr
Match: XP_022959670.1 (ethylene-responsive transcription factor 1B-like [Cucurbita moschata]) HSP 1 Score: 379.8 bits (974), Expect = 6.1e-102 Identity = 202/212 (95.28%), Postives = 202/212 (95.28%), Query Frame = 0
BLAST of Carg05117 vs. NCBI nr
Match: XP_023514563.1 (ethylene-responsive transcription factor 1B-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 375.9 bits (964), Expect = 8.8e-101 Identity = 206/212 (97.17%), Postives = 209/212 (98.58%), Query Frame = 0
BLAST of Carg05117 vs. NCBI nr
Match: XP_023004364.1 (ethylene-responsive transcription factor 1B-like [Cucurbita maxima]) HSP 1 Score: 359.4 bits (921), Expect = 8.5e-96 Identity = 191/212 (90.09%), Postives = 195/212 (91.98%), Query Frame = 0
BLAST of Carg05117 vs. NCBI nr
Match: XP_004148976.1 (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis sativus] >KGN44740.1 hypothetical protein Csa_7G375820 [Cucumis sativus]) HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62 Identity = 153/231 (66.23%), Postives = 170/231 (73.59%), Query Frame = 0
BLAST of Carg05117 vs. NCBI nr
Match: XP_008451254.1 (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo]) HSP 1 Score: 233.8 bits (595), Expect = 5.4e-58 Identity = 157/237 (66.24%), Postives = 175/237 (73.84%), Query Frame = 0
BLAST of Carg05117 vs. TAIR10
Match: AT3G23240.1 (ethylene response factor 1) HSP 1 Score: 174.1 bits (440), Expect = 9.2e-44 Identity = 88/143 (61.54%), Postives = 110/143 (76.92%), Query Frame = 0
BLAST of Carg05117 vs. TAIR10
Match: AT2G31230.1 (ethylene-responsive element binding factor 15) HSP 1 Score: 161.0 bits (406), Expect = 8.1e-40 Identity = 95/185 (51.35%), Postives = 117/185 (63.24%), Query Frame = 0
BLAST of Carg05117 vs. TAIR10
Match: AT1G06160.1 (octadecanoid-responsive Arabidopsis AP2/ERF 59) HSP 1 Score: 137.9 bits (346), Expect = 7.3e-33 Identity = 88/182 (48.35%), Postives = 114/182 (62.64%), Query Frame = 0
BLAST of Carg05117 vs. TAIR10
Match: AT5G43410.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 98.6 bits (244), Expect = 4.9e-21 Identity = 48/64 (75.00%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of Carg05117 vs. TAIR10
Match: AT5G61600.1 (ethylene response factor 104) HSP 1 Score: 97.8 bits (242), Expect = 8.4e-21 Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 0
BLAST of Carg05117 vs. Swiss-Prot
Match: sp|Q8LDC8|ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2) HSP 1 Score: 174.1 bits (440), Expect = 1.7e-42 Identity = 88/143 (61.54%), Postives = 110/143 (76.92%), Query Frame = 0
BLAST of Carg05117 vs. Swiss-Prot
Match: sp|Q8VYM0|ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.5e-38 Identity = 95/185 (51.35%), Postives = 117/185 (63.24%), Query Frame = 0
BLAST of Carg05117 vs. Swiss-Prot
Match: sp|Q9LND1|ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31 Identity = 88/182 (48.35%), Postives = 114/182 (62.64%), Query Frame = 0
BLAST of Carg05117 vs. Swiss-Prot
Match: sp|O04681|PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.5e-22 Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 0
BLAST of Carg05117 vs. Swiss-Prot
Match: sp|Q9LSX0|ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 GN=ERF096 PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 8.9e-20 Identity = 48/64 (75.00%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of Carg05117 vs. TrEMBL
Match: tr|A0A0A0K4U4|A0A0A0K4U4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375820 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.1e-62 Identity = 153/231 (66.23%), Postives = 170/231 (73.59%), Query Frame = 0
BLAST of Carg05117 vs. TrEMBL
Match: tr|A0A1S3BQG1|A0A1S3BQG1_CUCME (ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC103492600 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 3.6e-58 Identity = 157/237 (66.24%), Postives = 175/237 (73.84%), Query Frame = 0
BLAST of Carg05117 vs. TrEMBL
Match: tr|A0A2N9IRW2|A0A2N9IRW2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54745 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 4.8e-47 Identity = 105/152 (69.08%), Postives = 121/152 (79.61%), Query Frame = 0
BLAST of Carg05117 vs. TrEMBL
Match: tr|A0A0C5ACY7|A0A0C5ACY7_BETPL (ERF8 protein OS=Betula platyphylla OX=78630 GN=ERF8 PE=2 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 3.5e-45 Identity = 112/206 (54.37%), Postives = 139/206 (67.48%), Query Frame = 0
BLAST of Carg05117 vs. TrEMBL
Match: tr|A0A2C9UTA1|A0A2C9UTA1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G031700 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.5e-45 Identity = 108/198 (54.55%), Postives = 133/198 (67.17%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |