CmoCh08G002920 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G002920
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ethylene-responsive transcription factor 1B, putative
Location	Cmo_Chr08 : 1799748 .. 1800278 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTTTGCCGACATGTCGTTATCGTCGTCGTCGTCTGATTCGAGCCCTTGCTTGTCTCCGGAGATGCACGTTAAGGAGGAGATAGAAGACGGCGATATCATCGTGCAAGACGCTCAGACACAGAAGGAGGAGAGGGCTTATAGAGGGGTGCGGCGGAGGCCGTGGGGGAAGTACGCAGCCGAGATAAGAGACTCGACTCGACAAGGGGTGAGGGTTTGGTTGGGGACGTTTGATAGTGCGGAGGCTGCAGCATTGGCTTATGACCAAGCCGCATTTTGCATGAGAGGTGCATTAGCCACACTCAATTTTCCGGTGGAGGTTGTTCGAGAGTCGCTCTATGAAATGAAGTATCGATGGGAGGTCGGGTGCTCGCCTGTCTTAGCGCTCAAACGACGTCACACGATACGGAGGAAGAAGATGGCAGAAGCCGAGAAGATGGAGAAGAAGATGAAGAAGAAGAAAAATGTAGTTGTTTTTGAGGATTTGGGTGTTGAGTACTTAGAAGAACTATTAAGTTTGACTTCTTAA

mRNA sequence

ATGTTGTTTGCCGACATGTCGTTATCGTCGTCGTCGTCTGATTCGAGCCCTTGCTTGTCTCCGGAGATGCACGTTAAGGAGGAGATAGAAGACGGCGATATCATCGTGCAAGACGCTCAGACACAGAAGGAGGAGAGGGCTTATAGAGGGGTGCGGCGGAGGCCGTGGGGGAAGTACGCAGCCGAGATAAGAGACTCGACTCGACAAGGGGTGAGGGTTTGGTTGGGGACGTTTGATAGTGCGGAGGCTGCAGCATTGGCTTATGACCAAGCCGCATTTTGCATGAGAGGTGCATTAGCCACACTCAATTTTCCGGTGGAGGTTGTTCGAGAGTCGCTCTATGAAATGAAGTATCGATGGGAGGTCGGGTGCTCGCCTGTCTTAGCGCTCAAACGACGTCACACGATACGGAGGAAGAAGATGGCAGAAGCCGAGAAGATGGAGAAGAAGATGAAGAAGAAGAAAAATGTAGTTGTTTTTGAGGATTTGGGTGTTGAGTACTTAGAAGAACTATTAAGTTTGACTTCTTAA

Coding sequence (CDS)

ATGTTGTTTGCCGACATGTCGTTATCGTCGTCGTCGTCTGATTCGAGCCCTTGCTTGTCTCCGGAGATGCACGTTAAGGAGGAGATAGAAGACGGCGATATCATCGTGCAAGACGCTCAGACACAGAAGGAGGAGAGGGCTTATAGAGGGGTGCGGCGGAGGCCGTGGGGGAAGTACGCAGCCGAGATAAGAGACTCGACTCGACAAGGGGTGAGGGTTTGGTTGGGGACGTTTGATAGTGCGGAGGCTGCAGCATTGGCTTATGACCAAGCCGCATTTTGCATGAGAGGTGCATTAGCCACACTCAATTTTCCGGTGGAGGTTGTTCGAGAGTCGCTCTATGAAATGAAGTATCGATGGGAGGTCGGGTGCTCGCCTGTCTTAGCGCTCAAACGACGTCACACGATACGGAGGAAGAAGATGGCAGAAGCCGAGAAGATGGAGAAGAAGATGAAGAAGAAGAAAAATGTAGTTGTTTTTGAGGATTTGGGTGTTGAGTACTTAGAAGAACTATTAAGTTTGACTTCTTAA

Homology

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BLAST of CmoCh08G002920 vs. Swiss-Prot
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=1 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 5.2e-42
Identity = 89/143 (62.24%), Postives = 112/143 (78.32%), Query Frame = 1


Query: 33  DIIVQDAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAA 92
           D+ ++   ++K E++YRGVRRRPWGK+AAEIRDSTR G+RVWLGTF+SAE AALAYDQAA
Sbjct: 67  DLPIKSVSSRKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAA 126

Query: 93  FCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKRRHTIRRK---KMAEAEKMEK 152
           F MRG+ A LNF  E V+ESL E+KY +E GCSPV+ALKR+H++RR+   K  +    + 
Sbjct: 127 FSMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNKKTKDSDFDH 186

Query: 153 KMKKKKNVVVFEDLGVEYLEELL 173
           +  K  NVVVFEDLG +YLEELL
Sbjct: 187 RSVKLDNVVVFEDLGEQYLEELL 209

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BLAST of CmoCh08G002920 vs. Swiss-Prot
Match: ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana GN=ERF15 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-38
Identity = 94/185 (50.81%), Postives = 120/185 (64.86%), Query Frame = 1


Query: 20  SPEMHVKEEIEDGDIIVQDAQTQ---KEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLG 79
           SPEM +KEEI++GD+   + + +    EER+YRGVR+RPWGK+AAEIRDSTR G+RVWLG
Sbjct: 55  SPEMMIKEEIQNGDVSNSEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLG 114

Query: 80  TFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMK-YRWEVGCSPVLALKRRHT 139
           TFD AE AALAYDQAAF  +G+LATLNFPVEVVRESL +M+      G SPV+ALKR+H+
Sbjct: 115 TFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHS 174

Query: 140 IRRKKMAE----------------------------AEKMEKKMKKKKNVVVFEDLGVEY 173
           +R +   +                            + K     ++   +VVFEDLG EY
Sbjct: 175 LRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFEDLGAEY 234

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BLAST of CmoCh08G002920 vs. Swiss-Prot
Match: ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana GN=ERF094 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.2e-32
Identity = 86/182 (47.25%), Postives = 116/182 (63.74%), Query Frame = 1


Query: 25  VKEEIEDGDIIVQDAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAA 84
           +KEE ++  +  ++     EE++YRGVR+RPWGK+AAEIRDSTR+G+RVWLGTFD+AEAA
Sbjct: 64  IKEEGKEATVAAEE-----EEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAA 123

Query: 85  ALAYDQAAFCMRGALATLNFPVEVVRESLYEMK-YRWEVGCSPVLALKRRHTIR-----R 144
           ALAYDQAAF ++G+LA LNFP +VV ESL +M+      G SPV+ALKR+H++R     +
Sbjct: 124 ALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHSMRNRPRGK 183

Query: 145 KKMAEAE--------------------------KMEKKMKKKKN--VVVFEDLGVEYLEE 173
           KK + +                           K    M ++ N  +VV EDLG EYLEE
Sbjct: 184 KKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLEDLGAEYLEE 240

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BLAST of CmoCh08G002920 vs. Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.0e-22
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 1


Query: 46  RAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLNFP 105
           + YRGVRRRPWGKYAAEIRDS R G RVWLGTF++AE AALAYD+AAF MRGA A LNFP
Sbjct: 57  KKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFP 116

Query: 106 VEVVRESL 114
            E+V  S+
Sbjct: 117 SEIVNASV 124

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BLAST of CmoCh08G002920 vs. Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.2e-20
Identity = 48/64 (75.00%), Postives = 51/64 (79.69%), Query Frame = 1


Query: 44  EERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLN 103
           E   YRGVRRRPWGKYAAEIRDS + G RVWLGTFD+AE AA AYDQAA+ MRG  A LN
Sbjct: 11  EHGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILN 70

Query: 104 FPVE 108
           FP E
Sbjct: 71  FPHE 74

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BLAST of CmoCh08G002920 vs. TrEMBL
Match: A0A0A0K4U4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375820 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 5.5e-67
Identity = 147/191 (76.96%), Postives = 162/191 (84.82%), Query Frame = 1


Query: 1   MLFADMSLSS---SSSDSSPCLSP-EMHVKEEI-----EDG----DIIVQDAQTQKEERA 60
           MLF DM  +    SSSDSS C SP E+ VKEE+     E+G    +++V++ Q+ KEER 
Sbjct: 41  MLFDDMVFAEETMSSSDSSSCSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERV 100

Query: 61  YRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLNFPVE 120
           YRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRG LATLNFP+E
Sbjct: 101 YRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIE 160

Query: 121 VVRESLYEMKYRWEVGCSPVLALKRRHTIRRKKMAEAEKMEKKM--KKKKNVVVFEDLGV 177
           VVRESL EMKYRWEVG SPVLALKRRH+I+RK+MAE EKMEKKM  KKKK+VVVFEDLGV
Sbjct: 161 VVRESLREMKYRWEVGSSPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKSVVVFEDLGV 220

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BLAST of CmoCh08G002920 vs. TrEMBL
Match: A0A0A0L7G2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G389850 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.0e-48
Identity = 108/157 (68.79%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 25  VKEEIEDGDI-IVQDAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEA 84
           VKEEIE   I   ++ Q +  E++YRGVRRRPWGKYAAEIRDSTR GVRVWLGTFDSAEA
Sbjct: 61  VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120

Query: 85  AALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKRRHTIRRKKMAE 144
           AALAYDQAAF MRG +A LNFPVE+VRESL +++Y  E GCSPV+ALKR+H++RRK +A 
Sbjct: 121 AALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA 180

Query: 145 AEKM----EKKMKKKKNVVVFEDLGVEYLEELLSLTS 177
           A       +KKMKKK NVV+ EDLG EYLEELL L+S
Sbjct: 181 ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 217

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BLAST of CmoCh08G002920 vs. TrEMBL
Match: A0A067JRM4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17700 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.0e-45
Identity = 96/138 (69.57%), Postives = 119/138 (86.23%), Query Frame = 1


Query: 39  AQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGA 98
           ++ +++E++YRGVR+RPWGKYAAEIRDSTR G+RVWLGTFDSAEAAALAYDQAAF MRG+
Sbjct: 77  SKEERKEKSYRGVRKRPWGKYAAEIRDSTRNGIRVWLGTFDSAEAAALAYDQAAFSMRGS 136

Query: 99  LATLNFPVEVVRESLYEMKYRWEVGCSPVLALKRRHTIRRK---KMAEAEKMEKKMKKKK 158
           +A LNFPVEVVRESL ++KYR+E GCSPV+ALK++H++RRK   K ++ E  E    +K+
Sbjct: 137 MAILNFPVEVVRESLQDIKYRFEDGCSPVIALKKKHSMRRKSTSKKSKKETNEVNTSRKQ 196

Query: 159 NVVVFEDLGVEYLEELLS 174
           NVVV EDLG EYLEELLS
Sbjct: 197 NVVVLEDLGAEYLEELLS 214

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BLAST of CmoCh08G002920 vs. TrEMBL
Match: B9T293_RICCO (Ethylene-responsive transcription factor 1B, putative (Fragment) OS=Ricinus communis GN=RCOM_0463380 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.5e-45
Identity = 106/174 (60.92%), Postives = 132/174 (75.86%), Query Frame = 1


Query: 1   MLFADMSLSSSSSDSSPCLSPEMHVKEEIEDGDIIVQDAQTQKEERAYRGVRRRPWGKYA 60
           +LF  +S +++   SS   S    VKEE E      ++  T K+E++YRGVR+RPWGKYA
Sbjct: 51  ILFDVLSKATNRDQSSESNSTSSRVKEE-EVSSSKEEEVSTGKKEKSYRGVRKRPWGKYA 110

Query: 61  AEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRW 120
           AEIRDSTR G+RVWLGTFDSAEAAALAYDQAAF MRG++A LNFPVE+VRES+ E+KYR 
Sbjct: 111 AEIRDSTRNGIRVWLGTFDSAEAAALAYDQAAFSMRGSMAILNFPVEMVRESMQEIKYRC 170

Query: 121 EVGCSPVLALKRRHTIRRKKMA-EAEKMEKKMKKKKNVVVFEDLGVEYLEELLS 174
           E GCSPV+ALKRRH++RR   + E++  E    + ++VVV EDLG EYLEELLS
Sbjct: 171 EDGCSPVVALKRRHSMRRNSSSTESKGKEVNNNRTQHVVVLEDLGAEYLEELLS 223

[Close]

BLAST of CmoCh08G002920 vs. TrEMBL
Match: A0A061DQT7_THECC (Ethylene response factor 1 OS=Theobroma cacao GN=TCM_004056 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.2e-44
Identity = 102/175 (58.29%), Postives = 134/175 (76.57%), Query Frame = 1


Query: 1   MLFADMSLSSSSSDSSPCLSPEMHVKEEIEDGDIIVQDAQTQ--KEERAYRGVRRRPWGK 60
           ML+ D+ L+    +SS   S +   +EE+        DA+ +  K+++ YRGVR+RPWGK
Sbjct: 104 MLWMDL-LAQGPKESSESNSTDGLKEEEV------TSDAKQEEPKKDKTYRGVRKRPWGK 163

Query: 61  YAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKY 120
           YAAEIRDSTR GVRVWLGTFDSAEAAALAYDQAAF MRG+LATLNFP+EVVRESL ++KY
Sbjct: 164 YAAEIRDSTRNGVRVWLGTFDSAEAAALAYDQAAFSMRGSLATLNFPIEVVRESLQDIKY 223

Query: 121 RWEVGCSPVLALKRRHTIRRKKMAEAEKMEKKMKKKKNVVVFEDLGVEYLEELLS 174
           R E GCSPV+ALK+RH++R++   +  K  +  ++++N+VV EDLG +YLE+LLS
Sbjct: 224 RCEDGCSPVVALKKRHSLRKRSKNKKSKQNEAARQQQNLVVLEDLGADYLEQLLS 271

[Close]

BLAST of CmoCh08G002920 vs. TAIR10
Match: AT3G23240.1 (AT3G23240.1 ethylene response factor 1)

HSP 1 Score: 172.2 bits (435), Expect = 2.9e-43
Identity = 89/143 (62.24%), Postives = 112/143 (78.32%), Query Frame = 1


Query: 33  DIIVQDAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAA 92
           D+ ++   ++K E++YRGVRRRPWGK+AAEIRDSTR G+RVWLGTF+SAE AALAYDQAA
Sbjct: 67  DLPIKSVSSRKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAA 126

Query: 93  FCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKRRHTIRRK---KMAEAEKMEK 152
           F MRG+ A LNF  E V+ESL E+KY +E GCSPV+ALKR+H++RR+   K  +    + 
Sbjct: 127 FSMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNKKTKDSDFDH 186

Query: 153 KMKKKKNVVVFEDLGVEYLEELL 173
           +  K  NVVVFEDLG +YLEELL
Sbjct: 187 RSVKLDNVVVFEDLGEQYLEELL 209

[Close]

BLAST of CmoCh08G002920 vs. TAIR10
Match: AT2G31230.1 (AT2G31230.1 ethylene-responsive element binding factor 15)

HSP 1 Score: 161.0 bits (406), Expect = 6.7e-40
Identity = 94/185 (50.81%), Postives = 120/185 (64.86%), Query Frame = 1


Query: 20  SPEMHVKEEIEDGDIIVQDAQTQ---KEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLG 79
           SPEM +KEEI++GD+   + + +    EER+YRGVR+RPWGK+AAEIRDSTR G+RVWLG
Sbjct: 55  SPEMMIKEEIQNGDVSNSEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLG 114

Query: 80  TFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMK-YRWEVGCSPVLALKRRHT 139
           TFD AE AALAYDQAAF  +G+LATLNFPVEVVRESL +M+      G SPV+ALKR+H+
Sbjct: 115 TFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHS 174

Query: 140 IRRKKMAE----------------------------AEKMEKKMKKKKNVVVFEDLGVEY 173
           +R +   +                            + K     ++   +VVFEDLG EY
Sbjct: 175 LRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFEDLGAEY 234

[Close]

BLAST of CmoCh08G002920 vs. TAIR10
Match: AT1G06160.1 (AT1G06160.1 octadecanoid-responsive Arabidopsis AP2/ERF 59)

HSP 1 Score: 140.2 bits (352), Expect = 1.2e-33
Identity = 86/182 (47.25%), Postives = 116/182 (63.74%), Query Frame = 1


Query: 25  VKEEIEDGDIIVQDAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAA 84
           +KEE ++  +  ++     EE++YRGVR+RPWGK+AAEIRDSTR+G+RVWLGTFD+AEAA
Sbjct: 64  IKEEGKEATVAAEE-----EEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAA 123

Query: 85  ALAYDQAAFCMRGALATLNFPVEVVRESLYEMK-YRWEVGCSPVLALKRRHTIR-----R 144
           ALAYDQAAF ++G+LA LNFP +VV ESL +M+      G SPV+ALKR+H++R     +
Sbjct: 124 ALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHSMRNRPRGK 183

Query: 145 KKMAEAE--------------------------KMEKKMKKKKN--VVVFEDLGVEYLEE 173
           KK + +                           K    M ++ N  +VV EDLG EYLEE
Sbjct: 184 KKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLEDLGAEYLEE 240

[Close]

BLAST of CmoCh08G002920 vs. TAIR10
Match: AT5G43410.1 (AT5G43410.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 4.1e-21
Identity = 48/64 (75.00%), Postives = 51/64 (79.69%), Query Frame = 1


Query: 44  EERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLN 103
           E   YRGVRRRPWGKYAAEIRDS + G RVWLGTFD+AE AA AYDQAA+ MRG  A LN
Sbjct: 11  EHGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILN 70

Query: 104 FPVE 108
           FP E
Sbjct: 71  FPHE 74

[Close]

BLAST of CmoCh08G002920 vs. TAIR10
Match: AT5G61600.1 (AT5G61600.1 ethylene response factor 104)

HSP 1 Score: 97.8 bits (242), Expect = 7.0e-21
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 1


Query: 40  QTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGAL 99
           + ++EER YRGVRRRPWGKYAAEIRD  ++G R+WLGT+D+A  A  AYDQAAF +RG  
Sbjct: 80  EKEEEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRK 139

Query: 100 ATLNFPVEV 109
           A LNFP++V
Sbjct: 140 AILNFPLDV 148

[Close]

BLAST of CmoCh08G002920 vs. NCBI nr
Match: gi|449462495|ref|XP_004148976.1| (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 7.9e-67
Identity = 147/191 (76.96%), Postives = 162/191 (84.82%), Query Frame = 1


Query: 1   MLFADMSLSS---SSSDSSPCLSP-EMHVKEEI-----EDG----DIIVQDAQTQKEERA 60
           MLF DM  +    SSSDSS C SP E+ VKEE+     E+G    +++V++ Q+ KEER 
Sbjct: 41  MLFDDMVFAEETMSSSDSSSCSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERV 100

Query: 61  YRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLNFPVE 120
           YRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRG LATLNFP+E
Sbjct: 101 YRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIE 160

Query: 121 VVRESLYEMKYRWEVGCSPVLALKRRHTIRRKKMAEAEKMEKKM--KKKKNVVVFEDLGV 177
           VVRESL EMKYRWEVG SPVLALKRRH+I+RK+MAE EKMEKKM  KKKK+VVVFEDLGV
Sbjct: 161 VVRESLREMKYRWEVGSSPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKSVVVFEDLGV 220

[Close]

BLAST of CmoCh08G002920 vs. NCBI nr
Match: gi|659100760|ref|XP_008451254.1| (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo])

HSP 1 Score: 250.4 bits (638), Expect = 2.4e-63
Identity = 145/194 (74.74%), Postives = 159/194 (81.96%), Query Frame = 1


Query: 1   MLFADM-----SLSSSSSDSSPCLSP-EMHVKEEI-----EDG----DIIVQDAQTQKEE 60
           MLF DM       + SSSDSS C S   M VKEE+     ++G    D++V++ Q+ KEE
Sbjct: 42  MLFDDMVSVAAEETMSSSDSSSCSSSIVMQVKEEVVEVEVDEGSFSEDVVVEEDQSHKEE 101

Query: 61  RAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLNFP 120
           R YRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRG LATLNFP
Sbjct: 102 RVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFP 161

Query: 121 VEVVRESLYEMKYRWEVGCSPVLALKRRHTIRRKKMAEAEKMEKKM---KKKKNVVVFED 177
           +EVVRESL EMKYR EVG SPVLALKRRH+I+RK+MAE EKMEKKM   KKKK+VVVFED
Sbjct: 162 IEVVRESLREMKYRREVGSSPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKKSVVVFED 221

[Close]

BLAST of CmoCh08G002920 vs. NCBI nr
Match: gi|449468546|ref|XP_004151982.1| (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis sativus])

HSP 1 Score: 200.3 bits (508), Expect = 2.8e-48
Identity = 108/157 (68.79%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 25  VKEEIEDGDI-IVQDAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEA 84
           VKEEIE   I   ++ Q +  E++YRGVRRRPWGKYAAEIRDSTR GVRVWLGTFDSAEA
Sbjct: 61  VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120

Query: 85  AALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKRRHTIRRKKMAE 144
           AALAYDQAAF MRG +A LNFPVE+VRESL +++Y  E GCSPV+ALKR+H++RRK +A 
Sbjct: 121 AALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA 180

Query: 145 AEKM----EKKMKKKKNVVVFEDLGVEYLEELLSLTS 177
           A       +KKMKKK NVV+ EDLG EYLEELL L+S
Sbjct: 181 ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 217

[Close]

BLAST of CmoCh08G002920 vs. NCBI nr
Match: gi|659093226|ref|XP_008447432.1| (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo])

HSP 1 Score: 199.1 bits (505), Expect = 6.3e-48
Identity = 107/155 (69.03%), Postives = 126/155 (81.29%), Query Frame = 1


Query: 25  VKEEIEDGDI-IVQDAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEA 84
           VKEEIE   I   ++ Q +  E+ YRGVRRRPWGKYAAEIRDSTR GVRVWLGTFDSAEA
Sbjct: 61  VKEEIEVNSIDFKEEKQRKTTEKNYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120

Query: 85  AALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKRRHTIRRKKMAE 144
           AALAYDQAAF MRG +A LNFPVE+VRESL +++Y+ E GCSPV+ALK++H++RRK +A 
Sbjct: 121 AALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYQLEEGCSPVVALKKKHSMRRKSVAA 180

Query: 145 AEKM--EKKMKKKKNVVVFEDLGVEYLEELLSLTS 177
           A     +KKMKKK NVV+ EDLG EYLEELL L+S
Sbjct: 181 ATAAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 215

[Close]

BLAST of CmoCh08G002920 vs. NCBI nr
Match: gi|1009173946|ref|XP_015868087.1| (PREDICTED: ethylene-responsive transcription factor 1B-like [Ziziphus jujuba])

HSP 1 Score: 193.0 bits (489), Expect = 4.5e-46
Identity = 98/154 (63.64%), Postives = 125/154 (81.17%), Query Frame = 1


Query: 23  MHVKEEIEDGDIIVQDAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAE 82
           + +KEE E    + ++ +  ++E++YRGVR+RPWGKYAAEIRDSTR G+RVWLGTFD+AE
Sbjct: 79  VEIKEE-EVTSSVAKEERVCEKEKSYRGVRKRPWGKYAAEIRDSTRHGIRVWLGTFDTAE 138

Query: 83  AAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKRRHTIRRKKMA 142
           AAALAYDQAAF MRG+LA LNFPVE VR+SL EMKY+WE GCSPV+ LK++H++RRK+++
Sbjct: 139 AAALAYDQAAFSMRGSLAVLNFPVETVRQSLQEMKYQWEEGCSPVMTLKKKHSMRRKRIS 198

Query: 143 EAEKMEKKMKKKKNVVVFEDLGVEYLEELLSLTS 177
              K+     KK+ VVV EDLG  YLEELLSL+S
Sbjct: 199 RKSKV-----KKEEVVVLEDLGAAYLEELLSLSS 226

The following BLAST results are available for this feature:

BLAST of CmoCh08G002920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF92_ARATH	5.2e-42	62.24	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=...	[more]
ERF93_ARATH	1.2e-38	50.81	Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana GN=ERF15 PE=...	[more]
ERF94_ARATH	2.2e-32	47.25	Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana GN=ERF09...	[more]
PTI5_SOLLC	2.0e-22	75.00	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]
ERF96_ARATH	7.2e-20	75.00	Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF09...	[more]

BLAST of CmoCh08G002920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4U4_CUCSA	5.5e-67	76.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375820 PE=4 SV=1	[more]
A0A0A0L7G2_CUCSA	2.0e-48	68.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G389850 PE=4 SV=1	[more]
A0A067JRM4_JATCU	2.0e-45	69.57	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17700 PE=4 SV=1	[more]
B9T293_RICCO	3.5e-45	60.92	Ethylene-responsive transcription factor 1B, putative (Fragment) OS=Ricinus comm...	[more]
A0A061DQT7_THECC	2.2e-44	58.29	Ethylene response factor 1 OS=Theobroma cacao GN=TCM_004056 PE=4 SV=1	[more]

BLAST of CmoCh08G002920 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23240.1	2.9e-43	62.24	ethylene response factor 1	[more]
AT2G31230.1	6.7e-40	50.81	ethylene-responsive element binding factor 15	[more]
AT1G06160.1	1.2e-33	47.25	octadecanoid-responsive Arabidopsis AP2/ERF 59	[more]
AT5G43410.1	4.1e-21	75.00	Integrase-type DNA-binding superfamily protein	[more]
AT5G61600.1	7.0e-21	65.22	ethylene response factor 104	[more]

BLAST of CmoCh08G002920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462495\|ref\|XP_004148976.1\|	7.9e-67	76.96	PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis sativus]	[more]
gi\|659100760\|ref\|XP_008451254.1\|	2.4e-63	74.74	PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo]	[more]
gi\|449468546\|ref\|XP_004151982.1\|	2.8e-48	68.79	PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis sativus]	[more]
gi\|659093226\|ref\|XP_008447432.1\|	6.3e-48	69.03	PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo]	[more]
gi\|1009173946\|ref\|XP_015868087.1\|	4.5e-46	63.64	PREDICTED: ethylene-responsive transcription factor 1B-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0050896	response to stimulus
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G002920.1	CmoCh08G002920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 71..87 score: 2.0E-10coord: 48..59 score: 2.0
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 47..106 score: 2.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 48..97 score: 8.5
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 47..111 score: 1.2
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 47..105 score: 2
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 47..107 score: 7.85
None	No IPR available	unknown	Coil	Coil	coord: 137..157 scor
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 1..176 score: 3.7
None	No IPR available	PANTHER	PTHR31190:SF3	SUBFAMILY NOT NAMED	coord: 1..176 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G002920	Cucsa.388530	Cucumber (Gy14) v1	cgycmoB1078
CmoCh08G002920	CmaCh08G002940	Cucurbita maxima (Rimu)	cmacmoB913
CmoCh08G002920	Cla014832	Watermelon (97103) v1	cmowmB843
CmoCh08G002920	Csa7G375820	Cucumber (Chinese Long) v2	cmocuB900
CmoCh08G002920	MELO3C015737	Melon (DHL92) v3.5.1	cmomeB809
CmoCh08G002920	ClCG09G007770	Watermelon (Charleston Gray)	cmowcgB785
CmoCh08G002920	CSPI07G15610	Wild cucumber (PI 183967)	cmocpiB913
CmoCh08G002920	Lsi02G022150	Bottle gourd (USVL1VR-Ls)	cmolsiB809
CmoCh08G002920	Cp4.1LG17g06120	Cucurbita pepo (Zucchini)	cmocpeB853
CmoCh08G002920	MELO3C015737.2	Melon (DHL92) v3.6.1	cmomedB912
CmoCh08G002920	CsaV3_7G027380	Cucumber (Chinese Long) v3	cmocucB1066
CmoCh08G002920	Cla97C09G170380	Watermelon (97103) v2	cmowmbB916
CmoCh08G002920	CsGy7G014120	Cucumber (Gy14) v2	cgybcmoB955
CmoCh08G002920	Carg06215	Silver-seed gourd	carcmoB1290
CmoCh08G002920	Carg05117	Silver-seed gourd	carcmoB0119

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G002920	Silver-seed gourd	carcmoB0022
CmoCh08G002920	Cucumber (Chinese Long) v3	cmocucB1075
CmoCh08G002920	Wax gourd	cmowgoB1128
CmoCh08G002920	Wax gourd	cmowgoB1131
CmoCh08G002920	Cucurbita moschata (Rifu)	cmocmoB311
CmoCh08G002920	Cucurbita maxima (Rimu)	cmacmoB366