CsaV3_7G027380 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G027380
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionethylene-responsive transcription factor 1B-like
Locationchr7 : 16919258 .. 16920118 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCCCACCCACAATCACATTAAACTAAAACCCCATTTATCCAAAACATGTCAATTCTTAGTGATTTCTTTGGTAATTACCAAGAAAATTTCTTGTGGAACAATGATCACAATCAGAGTTTTATTTCCGGGGAAGAGACTTCATTTGACTTCAATTACTTGAACGATATGTTGTTTGATGATATGGTTTTCGCCGAAGAGACGATGTCGTCTTCGGATTCAAGCTCTTGCTCGTCTCCGATTGAGTTGCAAGTTAAGGAGGAGGTGGTGGAGGTGGAGGTGGAGGAAGGGAGTGTTTGTGATGAGGTCGTTGTGGAGGAAGATCAATCACATAAGGAGGAGAGGGTTTACCGAGGGGTACGGAGGCGGCCATGGGGGAAGTATGCAGCCGAGATTAGGGATTCGACACGACAAGGGGTGAGAGTGTGGTTAGGGACGTTTGATAGCGCCGAGGCGGCTGCGTTGGCATATGACCAAGCCGCATTTTGTATGAGAGGAGGGTTAGCCACGCTCAACTTTCCGATCGAGGTTGTTCGAGAGTCGCTTCGGGAAATGAAGTATCGGTGGGAGGTCGGGAGCTCACCGGTCTTGGCGCTTAAGCGGCGCCACTCCATACAGAGGAAGAGGATGGCTGAAGTGGAGAAGATGGAGAAGAAGATGATGAAGAAGAAGAAGAAAAGTGTAGTTGTTTTTGAGGATTTGGGTGTTGAGTACTTGGAAGAACTTTTAAGTTTGACTTCTTAAATTGTGGGTGGTCATTAGGGATTAGGGATGATTGTTAATTCTTTTGCCCTCTATTCTTTCCTTCTTTTCTTCATTTTATTGTAATACCTCAACTAGTTATTAATGTTTTAATAATACTT

mRNA sequence

ATGTCAATTCTTAGTGATTTCTTTGGTAATTACCAAGAAAATTTCTTGTGGAACAATGATCACAATCAGAGTTTTATTTCCGGGGAAGAGACTTCATTTGACTTCAATTACTTGAACGATATGTTGTTTGATGATATGGTTTTCGCCGAAGAGACGATGTCGTCTTCGGATTCAAGCTCTTGCTCGTCTCCGATTGAGTTGCAAGTTAAGGAGGAGGTGGTGGAGGTGGAGGTGGAGGAAGGGAGTGTTTGTGATGAGGTCGTTGTGGAGGAAGATCAATCACATAAGGAGGAGAGGGTTTACCGAGGGGTACGGAGGCGGCCATGGGGGAAGTATGCAGCCGAGATTAGGGATTCGACACGACAAGGGGTGAGAGTGTGGTTAGGGACGTTTGATAGCGCCGAGGCGGCTGCGTTGGCATATGACCAAGCCGCATTTTGTATGAGAGGAGGGTTAGCCACGCTCAACTTTCCGATCGAGGTTGTTCGAGAGTCGCTTCGGGAAATGAAGTATCGGTGGGAGGTCGGGAGCTCACCGGTCTTGGCGCTTAAGCGGCGCCACTCCATACAGAGGAAGAGGATGGCTGAAGTGGAGAAGATGGAGAAGAAGATGATGAAGAAGAAGAAGAAAAGTGTAGTTGTTTTTGAGGATTTGGGTGTTGAGTACTTGGAAGAACTTTTAAGTTTGACTTCTTAA

Coding sequence (CDS)

ATGTCAATTCTTAGTGATTTCTTTGGTAATTACCAAGAAAATTTCTTGTGGAACAATGATCACAATCAGAGTTTTATTTCCGGGGAAGAGACTTCATTTGACTTCAATTACTTGAACGATATGTTGTTTGATGATATGGTTTTCGCCGAAGAGACGATGTCGTCTTCGGATTCAAGCTCTTGCTCGTCTCCGATTGAGTTGCAAGTTAAGGAGGAGGTGGTGGAGGTGGAGGTGGAGGAAGGGAGTGTTTGTGATGAGGTCGTTGTGGAGGAAGATCAATCACATAAGGAGGAGAGGGTTTACCGAGGGGTACGGAGGCGGCCATGGGGGAAGTATGCAGCCGAGATTAGGGATTCGACACGACAAGGGGTGAGAGTGTGGTTAGGGACGTTTGATAGCGCCGAGGCGGCTGCGTTGGCATATGACCAAGCCGCATTTTGTATGAGAGGAGGGTTAGCCACGCTCAACTTTCCGATCGAGGTTGTTCGAGAGTCGCTTCGGGAAATGAAGTATCGGTGGGAGGTCGGGAGCTCACCGGTCTTGGCGCTTAAGCGGCGCCACTCCATACAGAGGAAGAGGATGGCTGAAGTGGAGAAGATGGAGAAGAAGATGATGAAGAAGAAGAAGAAAAGTGTAGTTGTTTTTGAGGATTTGGGTGTTGAGTACTTGGAAGAACTTTTAAGTTTGACTTCTTAA

Protein sequence

MSILSDFFGNYQENFLWNNDHNQSFISGEETSFDFNYLNDMLFDDMVFAEETMSSSDSSSCSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGSSPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKSVVVFEDLGVEYLEELLSLTS
Homology
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BLAST of CsaV3_7G027380 vs. NCBI nr
Match: XP_004148976.1 (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis sativus] >KGN44740.1 hypothetical protein Csa_7G375820 [Cucumis sativus])

HSP 1 Score: 418.3 bits (1074), Expect = 1.7e-113
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 

Query: 1   MSILSDFFGNYQENFLWNNDHNQSFISGEETSFDFNYLNDMLFDDMVFAEETMSSSDSSS 60
           MSILSDFFGNYQENFLWNNDHNQSFISGEETSFDFNYLNDMLFDDMVFAEETMSSSDSSS
Sbjct: 1   MSILSDFFGNYQENFLWNNDHNQSFISGEETSFDFNYLNDMLFDDMVFAEETMSSSDSSS 60

Query: 61  CSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDST 120
           CSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDST
Sbjct: 61  CSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDST 120

Query: 121 RQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGSSPV 180
           RQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGSSPV
Sbjct: 121 RQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGSSPV 180

Query: 181 LALKRRHSIQRKRMAEVEKMXXXXXXXXXXXXXXFEDLGVEYLEELLSLTS 232
           LALKRRHSIQRKRMAEVEKMXXXXXXXXXXXXXXFEDLGVEYLEELLSLTS
Sbjct: 181 LALKRRHSIQRKRMAEVEKMXXXXXXXXXXXXXXFEDLGVEYLEELLSLTS 231

[Close]
BLAST of CsaV3_7G027380 vs. NCBI nr
Match: XP_008451254.1 (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo])

HSP 1 Score: 316.6 bits (810), Expect = 6.9e-83
Identity = 193/235 (82.13%), Postives = 198/235 (84.26%), Query Frame = 0 

Query: 1   MSILSDFFGNYQENFLWNNDHNQSFISG-EETSFDFNYLNDMLFDDMVFA--EETMSSSD 60
           MSI+SD FGNYQENFLWNNDH  S ISG EE+SFDFNYLN MLFDDMV            
Sbjct: 1   MSIVSDLFGNYQENFLWNNDHCGSLISGQEESSFDFNYLNKMLFDDMVSVAXXXXXXXXX 60

Query: 61  SSSCSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIR 120
                          VVEVEV+EGS  ++VVVEEDQSHKEERVYRGVRRRPWGKYAAEIR
Sbjct: 61  XXXXXXXXXXXXXXXVVEVEVDEGSFSEDVVVEEDQSHKEERVYRGVRRRPWGKYAAEIR 120

Query: 121 DSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGS 180
           DSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYR EVGS
Sbjct: 121 DSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRREVGS 180

Query: 181 SPVLALKRRHSIQRKRMAEVEKM-XXXXXXXXXXXXXXFEDLGVEYLEELLSLTS 232
           SPVLALKRRHSIQRKRMAEVEKM XXXXXXXXXXXXXXFEDLGVEYLEELLSLTS
Sbjct: 181 SPVLALKRRHSIQRKRMAEVEKMXXXXXXXXXXXXXXXFEDLGVEYLEELLSLTS 235

[Close]
BLAST of CsaV3_7G027380 vs. NCBI nr
Match: XP_022959670.1 (ethylene-responsive transcription factor 1B-like [Cucurbita moschata])

HSP 1 Score: 258.1 bits (658), Expect = 2.9e-65
Identity = 159/231 (68.83%), Postives = 176/231 (76.19%), Query Frame = 0 

Query: 1   MSILSDFFGNYQENFLWNNDHNQSFISGEETSFDFNYLNDMLFDDMVFAEETMSSSDSSS 60
           MS+ +  FG YQENF      N         SF FNYL +MLF DM  +    SSSDSS 
Sbjct: 1   MSLHNHLFG-YQENF-----ENFPGKQNSHLSFHFNYLEEMLFADMSLSS---SSSDSSP 60

Query: 61  CSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDST 120
           C SP E+ VKE     E+E+G    +++V++ Q+ KEER YRGVRRRPWGKYAAEIRDST
Sbjct: 61  CLSP-EMHVKE-----EIEDG----DIIVQDAQTQKEERAYRGVRRRPWGKYAAEIRDST 120

Query: 121 RQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGSSPV 180
           RQGVRVWLGTFDSAEAAALAYDQAAFCMRG LATLNFP+EVVRESL EMKYRWEVG SPV
Sbjct: 121 RQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPV 180

Query: 181 LALKRRHSIQRKRMAEVEKMXXXXXXXXXXXXXXFEDLGVEYLEELLSLTS 232
           LALKRRH+I+RK+MAE EKM   XXXXXXX    FEDLGVEYLEELLSLTS
Sbjct: 181 LALKRRHTIRRKKMAEAEKM--EXXXXXXXNVVVFEDLGVEYLEELLSLTS 210

[Close]
BLAST of CsaV3_7G027380 vs. NCBI nr
Match: XP_023514563.1 (ethylene-responsive transcription factor 1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247.7 bits (631), Expect = 3.9e-62
Identity = 155/231 (67.10%), Postives = 171/231 (74.03%), Query Frame = 0 

Query: 1   MSILSDFFGNYQENFLWNNDHNQSFISGEETSFDFNYLNDMLFDDMVFAEETMSSSDSSS 60
           MS+ +  FG YQENF      N         SF FNYL +MLF DM  +           
Sbjct: 1   MSLHNHLFG-YQENF-----ENFPGKQNSHLSFHFNYLEEMLFADMSLS-XXXXXXXXXP 60

Query: 61  CSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDST 120
           C SP E+ VKE     E+E+G    ++VV+ED++ KEER YRGVRRRPWGKYAAEIRDST
Sbjct: 61  CLSP-EMHVKE-----EIEDG----DIVVQEDRTPKEERAYRGVRRRPWGKYAAEIRDST 120

Query: 121 RQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGSSPV 180
           RQGVRVWLGTFDSAEAAALAYDQAAFCMRG LATLNFP+EVVRESL EMKYRWEVG SPV
Sbjct: 121 RQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPV 180

Query: 181 LALKRRHSIQRKRMAEVEKMXXXXXXXXXXXXXXFEDLGVEYLEELLSLTS 232
           LALKRRH+I+RK+MAE EKM   XXXXXXX    FEDLGVEYLEELLSLTS
Sbjct: 181 LALKRRHTIRRKKMAEAEKM--EXXXXXXXNVVVFEDLGVEYLEELLSLTS 212

[Close]
BLAST of CsaV3_7G027380 vs. NCBI nr
Match: XP_023004364.1 (ethylene-responsive transcription factor 1B-like [Cucurbita maxima])

HSP 1 Score: 246.9 bits (629), Expect = 6.7e-62
Identity = 149/233 (63.95%), Postives = 169/233 (72.53%), Query Frame = 0 

Query: 1   MSILSDFFGNYQENFLWNNDHNQSFISGEET--SFDFNYLNDMLFDDMVFAEETMSSSDS 60
           MS+ +  FG YQENF       ++F   E +  SFDFNYL +MLF DM  +         
Sbjct: 1   MSLDNHLFG-YQENF-------RTFPGKENSHLSFDFNYLEEMLFADM-SSLSXXXXXXX 60

Query: 61  SSCSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRD 120
           S C SP E+ VKE     E+E+G    ++VV++D++ KEER YRGVRRRPWGKYAAEIRD
Sbjct: 61  SPCLSP-EMHVKE-----EIEDG----DIVVQDDRTPKEERAYRGVRRRPWGKYAAEIRD 120

Query: 121 STRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGSS 180
           STRQGVRVWLGTFDSAEAAALAYDQAAFCMRG LATLNFP EVVRESL EMKYRWEVG S
Sbjct: 121 STRQGVRVWLGTFDSAEAAALAYDQAAFCMRGALATLNFPAEVVRESLYEMKYRWEVGCS 180

Query: 181 PVLALKRRHSIQRKRMAEVEKMXXXXXXXXXXXXXXFEDLGVEYLEELLSLTS 232
           PVLALKRRH+I+RK++AE EKM              FEDLGVEYLEELLSLTS
Sbjct: 181 PVLALKRRHTIRRKKIAEAEKM---EKKMKKKNVVVFEDLGVEYLEELLSLTS 211

[Close]
BLAST of CsaV3_7G027380 vs. TAIR10
Match: AT3G23240.1 (ethylene response factor 1)

HSP 1 Score: 154.8 bits (390), Expect = 6.3e-38
Identity = 93/186 (50.00%), Postives = 119/186 (63.98%), Query Frame = 0 

Query: 51  ETMSSSDSSSCSSPIELQVKEE-----VVEVEVEE---GSVCDEVVVEEDQSHKEERVYR 110
           ++ SSS S++ S P      EE     ++E   ++    S   ++ ++   S K E+ YR
Sbjct: 24  DSFSSSSSNNYSLPFNENDSEEMFLYGLIEQSTQQTYIDSDSQDLPIKSVSSRKSEKSYR 83

Query: 111 GVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVV 170
           GVRRRPWGK+AAEIRDSTR G+RVWLGTF+SAE AALAYDQAAF MRG  A LNF  E V
Sbjct: 84  GVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAERV 143

Query: 171 RESLREMKYRWEVGSSPVLALKRRHSIQRKRMAEVEK-MXXXXXXXXXXXXXXFEDLGVE 228
           +ESL E+KY +E G SPV+ALKR+HS++R+   +  K                FEDLG +
Sbjct: 144 QESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNKKTKDSDFDHRSVKLDNVVVFEDLGEQ 203

[Close]
BLAST of CsaV3_7G027380 vs. TAIR10
Match: AT2G31230.1 (ethylene-responsive element binding factor 15)

HSP 1 Score: 142.9 bits (359), Expect = 2.5e-34
Identity = 89/182 (48.90%), Postives = 112/182 (61.54%), Query Frame = 0 

Query: 12  QENFLWNNDHNQSFISGEETSFDFNYLNDMLFDDMVFAEETMSSSDSSSCSSPIELQVKE 71
           QE+ LWN        S  +  F  NY                 S D  S  SP E+ +KE
Sbjct: 19  QESLLWNESCFLDQSSEPQAFFCPNY---------------DYSDDFFSFESP-EMMIKE 78

Query: 72  EVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTF 131
           E+   +V      ++V ++      EER YRGVR+RPWGK+AAEIRDSTR G+RVWLGTF
Sbjct: 79  EIQNGDVSNSEEEEKVGID------EERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTF 138

Query: 132 DSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMK-YRWEVGSSPVLALKRRHSIQ 191
           D AE AALAYDQAAF  +G LATLNFP+EVVRESL++M+      G SPV+ALKR+HS++
Sbjct: 139 DKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHSLR 178

Query: 192 RK 193
            +
Sbjct: 199 NR 178

[Close]
BLAST of CsaV3_7G027380 vs. TAIR10
Match: AT1G06160.1 (octadecanoid-responsive Arabidopsis AP2/ERF 59)

HSP 1 Score: 138.3 bits (347), Expect = 6.1e-33
Identity = 85/182 (46.70%), Postives = 115/182 (63.19%), Query Frame = 0 

Query: 12  QENFLWNNDHNQSFISGEETSFDFNYLNDMLFDDMVFAEETMSSSDSSSCSSPIELQVKE 71
           QE+FLW     +SF+     SFD ++L              +SS   + C      +   
Sbjct: 25  QESFLW----EESFL---HQSFDQSFL--------------LSSPTDNYCDDFFAFE--S 84

Query: 72  EVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTF 131
            +++ E +E +V  E         +EE+ YRGVR+RPWGK+AAEIRDSTR+G+RVWLGTF
Sbjct: 85  SIIKEEGKEATVAAE---------EEEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTF 144

Query: 132 DSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMK-YRWEVGSSPVLALKRRHSIQ 191
           D+AEAAALAYDQAAF ++G LA LNFP +VV ESLR+M+      G SPV+ALKR+HS++
Sbjct: 145 DTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHSMR 174

Query: 192 RK 193
            +
Sbjct: 205 NR 174

[Close]
BLAST of CsaV3_7G027380 vs. TAIR10
Match: AT5G51190.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 99.8 bits (247), Expect = 2.4e-21
Identity = 50/74 (67.57%), Postives = 56/74 (75.68%), Query Frame = 0 

Query: 87  VVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAF 146
           VV E DQ H     YRGVRRRPWGKYAAEIRD  ++GVRVWLGTFD+A  AA  YD+AAF
Sbjct: 63  VVQENDQRH-----YRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAF 122

Query: 147 CMRGGLATLNFPIE 161
            +RG  A LNFP+E
Sbjct: 123 KLRGSKAILNFPLE 131

[Close]
BLAST of CsaV3_7G027380 vs. TAIR10
Match: AT5G43410.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 5.4e-21
Identity = 48/64 (75.00%), Postives = 51/64 (79.69%), Query Frame = 0 

Query: 97  EERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLN 156
           E   YRGVRRRPWGKYAAEIRDS + G RVWLGTFD+AE AA AYDQAA+ MRG  A LN
Sbjct: 11  EHGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILN 70

Query: 157 FPIE 161
           FP E
Sbjct: 71  FPHE 74

[Close]
BLAST of CsaV3_7G027380 vs. Swiss-Prot
Match: sp|Q8LDC8|ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-36
Identity = 93/186 (50.00%), Postives = 119/186 (63.98%), Query Frame = 0 

Query: 51  ETMSSSDSSSCSSPIELQVKEE-----VVEVEVEE---GSVCDEVVVEEDQSHKEERVYR 110
           ++ SSS S++ S P      EE     ++E   ++    S   ++ ++   S K E+ YR
Sbjct: 24  DSFSSSSSNNYSLPFNENDSEEMFLYGLIEQSTQQTYIDSDSQDLPIKSVSSRKSEKSYR 83

Query: 111 GVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVV 170
           GVRRRPWGK+AAEIRDSTR G+RVWLGTF+SAE AALAYDQAAF MRG  A LNF  E V
Sbjct: 84  GVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAERV 143

Query: 171 RESLREMKYRWEVGSSPVLALKRRHSIQRKRMAEVEK-MXXXXXXXXXXXXXXFEDLGVE 228
           +ESL E+KY +E G SPV+ALKR+HS++R+   +  K                FEDLG +
Sbjct: 144 QESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNKKTKDSDFDHRSVKLDNVVVFEDLGEQ 203

[Close]
BLAST of CsaV3_7G027380 vs. Swiss-Prot
Match: sp|Q8VYM0|ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.5e-33
Identity = 89/182 (48.90%), Postives = 112/182 (61.54%), Query Frame = 0 

Query: 12  QENFLWNNDHNQSFISGEETSFDFNYLNDMLFDDMVFAEETMSSSDSSSCSSPIELQVKE 71
           QE+ LWN        S  +  F  NY                 S D  S  SP E+ +KE
Sbjct: 19  QESLLWNESCFLDQSSEPQAFFCPNY---------------DYSDDFFSFESP-EMMIKE 78

Query: 72  EVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTF 131
           E+   +V      ++V ++      EER YRGVR+RPWGK+AAEIRDSTR G+RVWLGTF
Sbjct: 79  EIQNGDVSNSEEEEKVGID------EERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTF 138

Query: 132 DSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMK-YRWEVGSSPVLALKRRHSIQ 191
           D AE AALAYDQAAF  +G LATLNFP+EVVRESL++M+      G SPV+ALKR+HS++
Sbjct: 139 DKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHSLR 178

Query: 192 RK 193
            +
Sbjct: 199 NR 178

[Close]
BLAST of CsaV3_7G027380 vs. Swiss-Prot
Match: sp|Q9LND1|ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31
Identity = 85/182 (46.70%), Postives = 115/182 (63.19%), Query Frame = 0 

Query: 12  QENFLWNNDHNQSFISGEETSFDFNYLNDMLFDDMVFAEETMSSSDSSSCSSPIELQVKE 71
           QE+FLW     +SF+     SFD ++L              +SS   + C      +   
Sbjct: 25  QESFLW----EESFL---HQSFDQSFL--------------LSSPTDNYCDDFFAFE--S 84

Query: 72  EVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTF 131
            +++ E +E +V  E         +EE+ YRGVR+RPWGK+AAEIRDSTR+G+RVWLGTF
Sbjct: 85  SIIKEEGKEATVAAE---------EEEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTF 144

Query: 132 DSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMK-YRWEVGSSPVLALKRRHSIQ 191
           D+AEAAALAYDQAAF ++G LA LNFP +VV ESLR+M+      G SPV+ALKR+HS++
Sbjct: 145 DTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHSMR 174

Query: 192 RK 193
            +
Sbjct: 205 NR 174

[Close]
BLAST of CsaV3_7G027380 vs. Swiss-Prot
Match: sp|O04681|PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.1e-22
Identity = 50/66 (75.76%), Postives = 55/66 (83.33%), Query Frame = 0 

Query: 101 YRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIE 160
           YRGVRRRPWGKYAAEIRDS R G RVWLGTF++AE AALAYD+AAF MRG  A LNFP E
Sbjct: 59  YRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSE 118

Query: 161 VVRESL 167
           +V  S+
Sbjct: 119 IVNASV 124

[Close]
BLAST of CsaV3_7G027380 vs. Swiss-Prot
Match: sp|Q8VY90|EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 GN=ERF105 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.4e-20
Identity = 50/74 (67.57%), Postives = 56/74 (75.68%), Query Frame = 0 

Query: 87  VVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAAALAYDQAAF 146
           VV E DQ H     YRGVRRRPWGKYAAEIRD  ++GVRVWLGTFD+A  AA  YD+AAF
Sbjct: 63  VVQENDQRH-----YRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAF 122

Query: 147 CMRGGLATLNFPIE 161
            +RG  A LNFP+E
Sbjct: 123 KLRGSKAILNFPLE 131

[Close]
BLAST of CsaV3_7G027380 vs. TrEMBL
Match: tr|A0A0A0K4U4|A0A0A0K4U4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375820 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.1e-113
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 

Query: 1   MSILSDFFGNYQENFLWNNDHNQSFISGEETSFDFNYLNDMLFDDMVFAEETMSSSDSSS 60
           MSILSDFFGNYQENFLWNNDHNQSFISGEETSFDFNYLNDMLFDDMVFAEETMSSSDSSS
Sbjct: 1   MSILSDFFGNYQENFLWNNDHNQSFISGEETSFDFNYLNDMLFDDMVFAEETMSSSDSSS 60

Query: 61  CSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDST 120
           CSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDST
Sbjct: 61  CSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDST 120

Query: 121 RQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGSSPV 180
           RQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGSSPV
Sbjct: 121 RQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGSSPV 180

Query: 181 LALKRRHSIQRKRMAEVEKMXXXXXXXXXXXXXXFEDLGVEYLEELLSLTS 232
           LALKRRHSIQRKRMAEVEKMXXXXXXXXXXXXXXFEDLGVEYLEELLSLTS
Sbjct: 181 LALKRRHSIQRKRMAEVEKMXXXXXXXXXXXXXXFEDLGVEYLEELLSLTS 231

[Close]
BLAST of CsaV3_7G027380 vs. TrEMBL
Match: tr|A0A1S3BQG1|A0A1S3BQG1_CUCME (ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC103492600 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 4.6e-83
Identity = 193/235 (82.13%), Postives = 198/235 (84.26%), Query Frame = 0 

Query: 1   MSILSDFFGNYQENFLWNNDHNQSFISG-EETSFDFNYLNDMLFDDMVFA--EETMSSSD 60
           MSI+SD FGNYQENFLWNNDH  S ISG EE+SFDFNYLN MLFDDMV            
Sbjct: 1   MSIVSDLFGNYQENFLWNNDHCGSLISGQEESSFDFNYLNKMLFDDMVSVAXXXXXXXXX 60

Query: 61  SSSCSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIR 120
                          VVEVEV+EGS  ++VVVEEDQSHKEERVYRGVRRRPWGKYAAEIR
Sbjct: 61  XXXXXXXXXXXXXXXVVEVEVDEGSFSEDVVVEEDQSHKEERVYRGVRRRPWGKYAAEIR 120

Query: 121 DSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGS 180
           DSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYR EVGS
Sbjct: 121 DSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRREVGS 180

Query: 181 SPVLALKRRHSIQRKRMAEVEKM-XXXXXXXXXXXXXXFEDLGVEYLEELLSLTS 232
           SPVLALKRRHSIQRKRMAEVEKM XXXXXXXXXXXXXXFEDLGVEYLEELLSLTS
Sbjct: 181 SPVLALKRRHSIQRKRMAEVEKMXXXXXXXXXXXXXXXFEDLGVEYLEELLSLTS 235

[Close]
BLAST of CsaV3_7G027380 vs. TrEMBL
Match: tr|A0A2N9IRW2|A0A2N9IRW2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54745 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 8.7e-42
Identity = 111/214 (51.87%), Postives = 132/214 (61.68%), Query Frame = 0 

Query: 24  SFISGEETSFDFNYLNDMLFDDM------VFAEETMSSSDSSSCSSPIELQVKEEVVEVE 83
           S  S +E  F  N L   L D        V A+    +S+++S        VKEE V   
Sbjct: 14  SSFSWDELLFHHNSLPFNLDDSQEMQLLDVLAKGAKETSEANSIG-----MVKEEEVTSN 73

Query: 84  VEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFDSAEAA 143
             +   CD+          +E+ YRGVRRRPWGKYAAEIRDSTR G+RVWLGTFDSAEAA
Sbjct: 74  TAKEEACDQ----------KEKSYRGVRRRPWGKYAAEIRDSTRHGIRVWLGTFDSAEAA 133

Query: 144 ALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGSSPVLALKRRHSIQRKRMAEV 203
           ALAYDQAAF MRG LA LNFP+EVVRESL++MKYR E G SPV+ALKRRHS++RK +   
Sbjct: 134 ALAYDQAAFSMRGSLAVLNFPVEVVRESLQDMKYRCEEGCSPVVALKRRHSMRRKTITRK 193

Query: 204 EKMXXXXXXXXXXXXXXFEDLGVEYLEELLSLTS 232
            K                EDLG +YLEE+LSL+S
Sbjct: 194 SK----GKEIRPQNVVVLEDLGADYLEEILSLSS 208

[Close]
BLAST of CsaV3_7G027380 vs. TrEMBL
Match: tr|A0A0C5ACY7|A0A0C5ACY7_BETPL (ERF8 protein OS=Betula platyphylla OX=78630 GN=ERF8 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.1e-41
Identity = 116/230 (50.43%), Postives = 144/230 (62.61%), Query Frame = 0 

Query: 18  NNDHNQSFISGEETSFD----------FNYLND----MLFDDMV---FAEETMSSSDSSS 77
           N + +Q  + GE  S+D          FN LND    +L D +     A+ET  S+  +S
Sbjct: 10  NTEFSQESLYGESLSWDELLFHHNSLPFN-LNDSEEMLLLDALAKGSSAKETWESTSPTS 69

Query: 78  CSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDST 137
           C     ++VKEE V                +D+  K+E+ YRGVRRRPWGKYAAEIRDST
Sbjct: 70  C----VVKVKEEEVTSN------------PKDKLCKKEKSYRGVRRRPWGKYAAEIRDST 129

Query: 138 RQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGSSPV 197
           R G+RVWLGTFDSAEAAALAYDQAAF MRG LA LNFP+EVVR SL++MKYR E G SPV
Sbjct: 130 RHGIRVWLGTFDSAEAAALAYDQAAFSMRGSLAVLNFPVEVVRNSLQDMKYRCEDGCSPV 189

Query: 198 LALKRRHSIQRKRMAEVEKMXXXXXXXXXXXXXXFEDLGVEYLEELLSLT 231
           +ALKR+HS++RK + + +K                EDLG +YLEELLSL+
Sbjct: 190 VALKRKHSMRRKSLTK-KKTTKGKKDSTPESVVVLEDLGADYLEELLSLS 221

[Close]
BLAST of CsaV3_7G027380 vs. TrEMBL
Match: tr|A0A067JRM4|A0A067JRM4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17700 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.5e-41
Identity = 110/222 (49.55%), Postives = 142/222 (63.96%), Query Frame = 0 

Query: 8   FGNYQENFLWNNDHNQSFISGEETSFDFNYLNDMLFDDMVFAEETMSSSDSSSCSSPIEL 67
           F +++E+F W NDHN SF+  E  SF  N+   M+  ++    ET +   S S SS    
Sbjct: 16  FDSFEESFSW-NDHN-SFVF-ESNSFSVNHSEKMILFNV--QPETTNKESSESNSS---- 75

Query: 68  QVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIRDSTRQGVRVW 127
                        G+   E V  +++  ++E+ YRGVR+RPWGKYAAEIRDSTR G+RVW
Sbjct: 76  ------------TGATKGEEVTSKEE--RKEKSYRGVRKRPWGKYAAEIRDSTRNGIRVW 135

Query: 128 LGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGSSPVLALKRRH 187
           LGTFDSAEAAALAYDQAAF MRG +A LNFP+EVVRESL+++KYR+E G SPV+ALK++H
Sbjct: 136 LGTFDSAEAAALAYDQAAFSMRGSMAILNFPVEVVRESLQDIKYRFEDGCSPVIALKKKH 195

Query: 188 SIQRKRMA-EVEKMXXXXXXXXXXXXXXFEDLGVEYLEELLS 229
           S++RK  + +                   EDLG EYLEELLS
Sbjct: 196 SMRRKSTSKKXXXETNEVNTSRKQNVVVLEDLGAEYLEELLS 214

The following BLAST results are available for this feature:
BLAST of CsaV3_7G027380 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004148976.11.7e-113100.00PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis sativus] >K... [more]
XP_008451254.16.9e-8382.13PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo][more]
XP_022959670.12.9e-6568.83ethylene-responsive transcription factor 1B-like [Cucurbita moschata][more]
XP_023514563.13.9e-6267.10ethylene-responsive transcription factor 1B-like [Cucurbita pepo subsp. pepo][more]
XP_023004364.16.7e-6263.95ethylene-responsive transcription factor 1B-like [Cucurbita maxima][more]
BLAST of CsaV3_7G027380 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G23240.16.3e-3850.00ethylene response factor 1[more]
AT2G31230.12.5e-3448.90ethylene-responsive element binding factor 15[more]
AT1G06160.16.1e-3346.70octadecanoid-responsive Arabidopsis AP2/ERF 59[more]
AT5G51190.12.4e-2167.57Integrase-type DNA-binding superfamily protein[more]
AT5G43410.15.4e-2175.00Integrase-type DNA-binding superfamily protein[more]
BLAST of CsaV3_7G027380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8LDC8|ERF92_ARATH1.1e-3650.00Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=E... [more]
sp|Q8VYM0|ERF93_ARATH4.5e-3348.90Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=E... [more]
sp|Q9LND1|ERF94_ARATH1.1e-3146.70Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|O04681|PTI5_SOLLC6.1e-2275.76Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu... [more]
sp|Q8VY90|EF105_ARATH4.4e-2067.57Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of CsaV3_7G027380 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K4U4|A0A0A0K4U4_CUCSA1.1e-113100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375820 PE=4 SV=1[more]
tr|A0A1S3BQG1|A0A1S3BQG1_CUCME4.6e-8382.13ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC1... [more]
tr|A0A2N9IRW2|A0A2N9IRW2_FAGSY8.7e-4251.87Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54745 PE=4 SV=1[more]
tr|A0A0C5ACY7|A0A0C5ACY7_BETPL1.1e-4150.43ERF8 protein OS=Betula platyphylla OX=78630 GN=ERF8 PE=2 SV=1[more]
tr|A0A067JRM4|A0A067JRM4_JATCU2.5e-4149.55Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17700 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0050896 response to stimulus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G027380.1CsaV3_7G027380.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 124..140
score: 65.88
coord: 101..112
score: 71.67
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 100..164
e-value: 9.5E-37
score: 138.1
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 100..150
e-value: 8.9E-14
score: 51.4
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 100..158
score: 22.787
IPR001471AP2/ERF domainCDDcd00018AP2coord: 101..159
e-value: 5.55571E-20
score: 80.0083
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 99..161
e-value: 3.6E-30
score: 105.6
NoneNo IPR availablePANTHERPTHR31190:SF35SUBFAMILY NOT NAMEDcoord: 14..231
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 14..231
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 100..160

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G027380CSPI07G15610Wild cucumber (PI 183967)cpicucB414
CsaV3_7G027380Cucsa.388530Cucumber (Gy14) v1cgycucB590
CsaV3_7G027380CmaCh08G002940Cucurbita maxima (Rimu)cmacucB1084
CsaV3_7G027380CmaCh02G017510Cucurbita maxima (Rimu)cmacucB0767
CsaV3_7G027380CmoCh08G002920Cucurbita moschata (Rifu)cmocucB1066
CsaV3_7G027380CmoCh08G010620Cucurbita moschata (Rifu)cmocucB1070
CsaV3_7G027380Cp4.1LG17g06120Cucurbita pepo (Zucchini)cpecucB0423
CsaV3_7G027380CsGy7G014120Cucumber (Gy14) v2cgybcucB347
CsaV3_7G027380Carg05117Silver-seed gourdcarcucB0102
CsaV3_7G027380Cla014832Watermelon (97103) v1cucwmB592
CsaV3_7G027380MELO3C015737Melon (DHL92) v3.5.1cucmeB538
CsaV3_7G027380ClCG09G007770Watermelon (Charleston Gray)cucwcgB547
CsaV3_7G027380Lsi02G022150Bottle gourd (USVL1VR-Ls)cuclsiB538
CsaV3_7G027380MELO3C015737.2Melon (DHL92) v3.6.1cucmedB526
CsaV3_7G027380Cla97C09G170380Watermelon (97103) v2cucwmbB593
CsaV3_7G027380Bhi09G000944Wax gourdcucwgoB726
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G027380Silver-seed gourdcarcucB0013
CsaV3_7G027380Cucurbita maxima (Rimu)cmacucB0457
CsaV3_7G027380Cucurbita maxima (Rimu)cmacucB0462
CsaV3_7G027380Cucurbita moschata (Rifu)cmocucB0450
CsaV3_7G027380Cucurbita moschata (Rifu)cmocucB0454
CsaV3_7G027380Cucurbita pepo (Zucchini)cpecucB0182
CsaV3_7G027380Melon (DHL92) v3.5.1cucmeB557
CsaV3_7G027380Melon (DHL92) v3.6.1cucmedB544
CsaV3_7G027380Wax gourdcucwgoB731