Carg11539 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11539
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Cytochrome oxidase assembly protein
Location	Cucurbita_argyrosperma_scaffold_083 : 541096 .. 544076 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTATTAAATTAAGGGTTGGAATTTCAAGTTTTGATTTTATATCTTTCATTTGACAAGTCTGCTCAAAATCAGCCGACAATTTTTTTAGGGAAGATTTCTATCGAGAAAGCGCGGCAGAACGATTTTGCGGTGAGCGGCTGAGGGAACGAAGAACCCACAAGCTGAAAATGCTGGCGAAGAGGTTGCTTTCCATATTCAAGCGCTCTCCAACTCCGAACGCTTCCAGGTGCGTCCTTCTTGTCATTCCGATTTTCGTTTTTTTCTGCTGTTTGTTCACGCTTCCATTTCTCGGATTGTTACGCGAACAATTACTAACTCATCCACGAGCTTCCGTTCAACATGGAATCGATTGCTCGCATTTTTTTCGAGGAGATACATCTAGGTTCTTCACTTTTTACATGTTTTGATCGTATAGCAGGTTTAATTTCCGCCTTATATGTTCGTTTAGAACTTGGAACTGTTTTATTTTGTTTTCTATGGAATGATTCTTACAAGATATTTCATCGATCTGTAACGGATAGAATGAAACTTGGCGATCTCTGATTAAGGGTTGCTTGCAGCAGTTCCGTAAGGCCATCGGAGGAAGGGGTGAATAAATCCTGGGGTCGCAAAGCAGTCTCCTTTGTACTTGTTACTGTTACTGGTGGTGTAGCCTTGAGTGCTTTAGATGACCTCGCCATTTATCATAGCTGTAGCAGGTATGTCTGACTTGTTAGGGATTTTCAAAATTTGGATGAATTATATCGTTTAAGCAAATGGAAGTTTGAATTTGGAGAAGATAAACTATGTATCTTGGGATTGCTTTTTATGCAACTGTTTTCTGCCATGTTTCACTTATTAGTGCTTTTAAGTTTAAGGAAACTCTCACCATTGCTATGTTGTTTTCAACCTTTAAAATTGGCTATGGTTTTACATCACTCAGGTCATTGTATTTTTTAAACCAAGCCTTTTCACTTTAGATGAACTAATGAATTGGATAGGATAATATCTCTAATACACCGTGATGTTTACATCATTGCTACCAAAAGCGTTCGGTTATCAACCTTGGGGACAAGAGAATGCAAGAATTCTTTTTCTTTGGTTTCTTTTTACCCATACGTACTTTGCTTTCTCTGTTTTTGTTGGGGCTTTAAATCTTTGTCATTGGCCTAGTTACTCAGATTTTGTGAGGTCTCGCATCGGTTGGAGTGGGGAACAAAACATTCCTTATAAGGGTGTACAAACCTCTCCCTAGTAGATGCGTTTTAAAACCTTGAGGGGACGCCCTTGAAGGGAAAGTTCAAAGAGAACAATATTTGCTAATGGCAGGCTTAAGCTGTTACAGGTTTAGTACTTTTATGAATGAAATCGTGGTTTAGTACTTTTATGAATGAAATCGTGCTAATAGATGATAGGGCTTCAGGGGCTTTAAGTGGATGCATTTTTTTCCTTTAATTTTAGAAGCTCAACCGGACTCCTGCTTACAGTGAATAGTCACCAGCACACTTTTGGCTTGGTGTATCTATAACCCGTTTTGACCTGAAAGCCTTTTTTTTTTCTTGGCTTGGTGTATTATATATAACTGAGGTCACCATTTTCAATAAGTTAGCTTCCTTTTTACAATTAGAACGAGACCCTGGATTTGATCAATATTTTCAGAATGAATAGGAACATGACTTAGAACCAACTGAACTAGGACTAACTTTCCTGTTTGCTTATCATTCAAAACTTAAAAGGATTGGAAAGTTCCAACAAGAGAGACGGACTTCGACCCACACTCTATCTCCTACCAAATATTTTCTTCACACCGTTCGACATAAAGAAATCCCAATCAGCGAATCCAAAAGATCTCGTGCTTCCTTTTAGTGGATAAACTGAGCAAGAATACAGAAGAGCATACAAAAAAACGCCCCAGCAAAAGGAGCCAAACTATAACTTGACTAACTATACAAAAAAGGGCTCCAATGCAAAAGAATAAGGCATCGAGGTCTGATTGTTTCATGGTTTCTTAGATAAACATTTAATATCCTTGTTCTTAGAATATGCTTGCATCTTGCATTGTACCTTAAATACATTGGTTAAGAACTGGTGCTTTGTAATACTTCTGAAAAAGAAATTTAGTCTAAGAATGAGAAGCTTTTACATGTACGTTTGTAGCAATTTTCTTTTGCAGTTGCTTGCTGGCATTAGAATTATTTGATTTTATTGTATTACTTTTCCAGCAAAGCCATAGAGAAAGCCAAGAACAATAGAGCAATTATAGATGCTATTGGAGAACCCATTGTTAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCATAAGAGACATTCTCTATCCTGCACGTTTCCGGTATCAGGACCCCAAGGCACGGGGATCGTCCAACTGAAGGCAGTTCGTAATGGAGGTCCTCGTTCAACTTTTTATTATCTTGTTCTATATTAGTCTTCGGGGCGAGTAAAGTTGACCTCGTCTTTATTCTTTTTATAATGCTTTTTGAATTGTAATATCTCAACAGAGGACTCCTGGATATCGTTTCTCCGGCCACGAGACTGGGACATCCTGATCATGGATGCTCTCCTACATGTTCCCGAAAACGAAGGTAAGCAGCAAACAATGCGTATTAATCTCACTGAGAAGTTTGCCCCTGCTGCTGCTGCTTGTGTCGCATGCACTGATTGTCAGTCTCCGGAGGCAGAGAAGAGATGAAGTCAGCTATTAAGTTTGCAGCTTCTTATTAGTTTTCTGTCCCGAAATGATTTCGAGCTGACCGAAGGATTAAAATATTCGTTATATGCATCAAAATAATATTTTTCTGTGGACTGCTTCGTCCAAATGCCTTCTAGTTCTAGGTGGAACCAGCTTAGAAGATTATTATCCAACAAGATTGCTAACATCAATCACTCTGTTTTTTATTTCATTTTTTGTATGGATAGCGTTCATGTTATGGGCGCTGACATAAACTTTCATTTATACCACTTACTGAGATTTCACTATA

mRNA sequence

TCTATTAAATTAAGGGTTGGAATTTCAAGTTTTGATTTTATATCTTTCATTTGACAAGTCTGCTCAAAATCAGCCGACAATTTTTTTAGGGAAGATTTCTATCGAGAAAGCGCGGCAGAACGATTTTGCGGTGAGCGGCTGAGGGAACGAAGAACCCACAAGCTGAAAATGCTGGCGAAGAGGTTGCTTTCCATATTCAAGCGCTCTCCAACTCCGAACGCTTCCAGGGTTGCTTGCAGCAGTTCCGTAAGGCCATCGGAGGAAGGGGTGAATAAATCCTGGGGTCGCAAAGCAGTCTCCTTTGTACTTGTTACTGTTACTGGTGGTGTAGCCTTGAGTGCTTTAGATGACCTCGCCATTTATCATAGCTGTAGCAGCAAAGCCATAGAGAAAGCCAAGAACAATAGAGCAATTATAGATGCTATTGGAGAACCCATTGTTAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCATAAGAGACATTCTCTATCCTGCACGTTTCCGGTATCAGGACCCCAAGGCACGGGGATCGTCCAACTGAAGGCAGTTCGTAATGGAGAGGACTCCTGGATATCGTTTCTCCGGCCACGAGACTGGGACATCCTGATCATGGATGCTCTCCTACATGTTCCCGAAAACGAAGGTAAGCAGCAAACAATGCGTATTAATCTCACTGAGAAGTTTGCCCCTGCTGCTGCTGCTTGTGTCGCATGCACTGATTGTCAGTCTCCGGAGGCAGAGAAGAGATGAAGTCAGCTATTAAGTTTGCAGCTTCTTATTAGTTTTCTGTCCCGAAATGATTTCGAGCTGACCGAAGGATTAAAATATTCGTTATATGCATCAAAATAATATTTTTCTGTGGACTGCTTCGTCCAAATGCCTTCTAGTTCTAGGTGGAACCAGCTTAGAAGATTATTATCCAACAAGATTGCTAACATCAATCACTCTGTTTTTTATTTCATTTTTTGTATGGATAGCGTTCATGTTATGGGCGCTGACATAAACTTTCATTTATACCACTTACTGAGATTTCACTATA

Coding sequence (CDS)

ATGCTGGCGAAGAGGTTGCTTTCCATATTCAAGCGCTCTCCAACTCCGAACGCTTCCAGGGTTGCTTGCAGCAGTTCCGTAAGGCCATCGGAGGAAGGGGTGAATAAATCCTGGGGTCGCAAAGCAGTCTCCTTTGTACTTGTTACTGTTACTGGTGGTGTAGCCTTGAGTGCTTTAGATGACCTCGCCATTTATCATAGCTGTAGCAGCAAAGCCATAGAGAAAGCCAAGAACAATAGAGCAATTATAGATGCTATTGGAGAACCCATTGTTAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCATAAGAGACATTCTCTATCCTGCACGTTTCCGGTATCAGGACCCCAAGGCACGGGGATCGTCCAACTGAAGGCAGTTCGTAATGGAGAGGACTCCTGGATATCGTTTCTCCGGCCACGAGACTGGGACATCCTGATCATGGATGCTCTCCTACATGTTCCCGAAAACGAAGGTAAGCAGCAAACAATGCGTATTAATCTCACTGAGAAGTTTGCCCCTGCTGCTGCTGCTTGTGTCGCATGCACTGATTGTCAGTCTCCGGAGGCAGAGAAGAGATGA

Protein sequence

MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR

Homology

[Close]

BLAST of Carg11539 vs. NCBI nr
Match: XP_022954302.1 (uncharacterized protein LOC111456591 isoform X1 [Cucurbita moschata])

HSP 1 Score: 374.0 bits (959), Expect = 3.1e-100
Identity = 188/195 (96.41%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1   MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD 60
           MLAKRLLSIFKRSPTPNAS    SSSVRPSEEGVNKSWGR AVSFVLVTVTGGVALSALD
Sbjct: 1   MLAKRLLSIFKRSPTPNAS----SSSVRPSEEGVNKSWGRNAVSFVLVTVTGGVALSALD 60

Query: 61  DLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120
           DLAIYHSCSSKAIEKAKNN+AIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG
Sbjct: 61  DLAIYHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120

Query: 121 TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAA 180
           TGIVQLKAVRNGE+SWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAA
Sbjct: 121 TGIVQLKAVRNGEESWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAA 180

Query: 181 CVACTDCQSPEAEKR 196
           CVACTDCQSPEAEKR
Sbjct: 181 CVACTDCQSPEAEKR 191

[Close]

BLAST of Carg11539 vs. NCBI nr
Match: XP_022954303.1 (uncharacterized protein LOC111456591 isoform X2 [Cucurbita moschata])

HSP 1 Score: 372.5 bits (955), Expect = 8.9e-100
Identity = 187/195 (95.90%), Postives = 189/195 (96.92%), Query Frame = 0


Query: 1   MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD 60
           MLAKRLLSIFKRSPTPNA     SSSVRPSEEGVNKSWGR AVSFVLVTVTGGVALSALD
Sbjct: 1   MLAKRLLSIFKRSPTPNA-----SSSVRPSEEGVNKSWGRNAVSFVLVTVTGGVALSALD 60

Query: 61  DLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120
           DLAIYHSCSSKAIEKAKNN+AIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG
Sbjct: 61  DLAIYHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120

Query: 121 TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAA 180
           TGIVQLKAVRNGE+SWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAA
Sbjct: 121 TGIVQLKAVRNGEESWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAA 180

Query: 181 CVACTDCQSPEAEKR 196
           CVACTDCQSPEAEKR
Sbjct: 181 CVACTDCQSPEAEKR 190

[Close]

BLAST of Carg11539 vs. NCBI nr
Match: XP_022991411.1 (uncharacterized protein LOC111488050 isoform X1 [Cucurbita maxima])

HSP 1 Score: 370.5 bits (950), Expect = 3.4e-99
Identity = 186/195 (95.38%), Postives = 188/195 (96.41%), Query Frame = 0


Query: 1   MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD 60
           MLAKR LSIFKRSPTPNAS    SSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD
Sbjct: 1   MLAKRFLSIFKRSPTPNAS----SSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD 60

Query: 61  DLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120
           DLAIYHSCSSKAIEKAKNN+AIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG
Sbjct: 61  DLAIYHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120

Query: 121 TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAA 180
           TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQT+RINLTEKFAPAAA 
Sbjct: 121 TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTLRINLTEKFAPAAAP 180

Query: 181 CVACTDCQSPEAEKR 196
           CVACTDCQSP AEKR
Sbjct: 181 CVACTDCQSPTAEKR 191

[Close]

BLAST of Carg11539 vs. NCBI nr
Match: XP_022991412.1 (uncharacterized protein LOC111488050 isoform X2 [Cucurbita maxima])

HSP 1 Score: 369.0 bits (946), Expect = 9.9e-99
Identity = 185/195 (94.87%), Postives = 187/195 (95.90%), Query Frame = 0


Query: 1   MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD 60
           MLAKR LSIFKRSPTPNA     SSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD
Sbjct: 1   MLAKRFLSIFKRSPTPNA-----SSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD 60

Query: 61  DLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120
           DLAIYHSCSSKAIEKAKNN+AIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG
Sbjct: 61  DLAIYHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120

Query: 121 TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAA 180
           TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQT+RINLTEKFAPAAA 
Sbjct: 121 TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTLRINLTEKFAPAAAP 180

Query: 181 CVACTDCQSPEAEKR 196
           CVACTDCQSP AEKR
Sbjct: 181 CVACTDCQSPTAEKR 190

[Close]

BLAST of Carg11539 vs. NCBI nr
Match: XP_023547892.1 (uncharacterized protein LOC111806704 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 356.3 bits (913), Expect = 6.6e-95
Identity = 183/196 (93.37%), Postives = 185/196 (94.39%), Query Frame = 0


Query: 1   MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD 60
           MLAKR LSIFKRSPTPNAS    SSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD
Sbjct: 35  MLAKRFLSIFKRSPTPNAS----SSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD 94

Query: 61  DLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120
           DLAIYHSCSSKAIEKAKNN+AIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG
Sbjct: 95  DLAIYHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 154

Query: 121 TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAA 180
           TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQT+RINLTEKFAPAAAA
Sbjct: 155 TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTLRINLTEKFAPAAAA 214

Query: 181 -CVACTDCQSPEAEKR 196
                 DCQSPEAEKR
Sbjct: 215 XXXXXXDCQSPEAEKR 226

[Close]

BLAST of Carg11539 vs. TAIR10
Match: AT2G20390.2 (unknown protein)

HSP 1 Score: 213.4 bits (542), Expect = 1.3e-55
Identity = 115/213 (53.99%), Postives = 137/213 (64.32%), Query Frame = 0


Query: 1   MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD 60
           M A+R  S FK S T +  + A          G   S+GRKAVSFVL+TVTGGVALSALD
Sbjct: 1   MFARRFTSFFKGSSTSSPDKTA----------GTLGSFGRKAVSFVLITVTGGVALSALD 60

Query: 61  DLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120
           DL+IY  CSSKA+EK  N++ +I+AIGEPI KGPWYNASLAV+H+RHS+SC+FPV GPQG
Sbjct: 61  DLSIYRGCSSKAMEKVMNSKVMIEAIGEPIEKGPWYNASLAVSHQRHSVSCSFPVIGPQG 120

Query: 121 TGIVQLKAVRNG------------------------------------EDSWISFLRPRD 178
           TGI+ LKAVRNG                                    EDS   FL+ RD
Sbjct: 121 TGILHLKAVRNGGKHSQTRTVTQRQNICVRYLHLPFFLLIGSPFLLGIEDSMFGFLQQRD 180

[Close]

BLAST of Carg11539 vs. TrEMBL
Match: tr|A0A0A0KF26|A0A0A0KF26_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087990 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 6.8e-88
Identity = 164/195 (84.10%), Postives = 180/195 (92.31%), Query Frame = 0


Query: 1   MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD 60
           MLAKR  SIFKRS TP+AS    S+S++P+E  VNKSWGRKAVSFVL+TVTGGVALSALD
Sbjct: 1   MLAKRFASIFKRSSTPHAS----SNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALD 60

Query: 61  DLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120
           DLAIYHSCSSKAIEK +NN+A+IDAIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQG
Sbjct: 61  DLAIYHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120

Query: 121 TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAA 180
           TGI+QLKAVRNGEDSWISFLRPRDWDIL+MDALL+VPENEGKQ+T+RINL+EKFAP  AA
Sbjct: 121 TGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAP--AA 180

Query: 181 CVACTDCQSPEAEKR 196
           CV+CTDCQ PE EKR
Sbjct: 181 CVSCTDCQPPETEKR 189

[Close]

BLAST of Carg11539 vs. TrEMBL
Match: tr|A0A1S3CBF0|A0A1S3CBF0_CUCME (uncharacterized protein LOC103498925 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498925 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 5.7e-87
Identity = 164/195 (84.10%), Postives = 177/195 (90.77%), Query Frame = 0


Query: 1   MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD 60
           MLAKR  SIFKRS TP AS    S+S++PSE  VNKSWGRKAVSFVL+TVTGGVALSALD
Sbjct: 20  MLAKRFASIFKRSSTPYAS----SNSIKPSENEVNKSWGRKAVSFVLITVTGGVALSALD 79

Query: 61  DLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120
           DLAIYHSCSSKAIEKA+NN+A+ DAIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQG
Sbjct: 80  DLAIYHSCSSKAIEKARNNQAVKDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQG 139

Query: 121 TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAA 180
            GI+QLKAVRNGEDSWISFLRPRDWDIL+MDALL+VPENEGKQ+T+RINLTEKFAP  AA
Sbjct: 140 AGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLTEKFAP--AA 199

Query: 181 CVACTDCQSPEAEKR 196
           CV+CT CQ PE EKR
Sbjct: 200 CVSCTGCQPPETEKR 208

[Close]

BLAST of Carg11539 vs. TrEMBL
Match: tr|A0A1S3CBW1|A0A1S3CBW1_CUCME (uncharacterized protein LOC103498925 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498925 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 6.1e-81
Identity = 148/171 (86.55%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 25  SSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNRAIID 84
           +S++PSE  VNKSWGRKAVSFVL+TVTGGVALSALDDLAIYHSCSSKAIEKA+NN+A+ D
Sbjct: 9   NSIKPSENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVKD 68

Query: 85  AIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRD 144
           AIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQG GI+QLKAVRNGEDSWISFLRPRD
Sbjct: 69  AIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGAGILQLKAVRNGEDSWISFLRPRD 128

Query: 145 WDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAACVACTDCQSPEAEKR 196
           WDIL+MDALL+VPENEGKQ+T+RINLTEKFAP  AACV+CT CQ PE EKR
Sbjct: 129 WDILMMDALLYVPENEGKQKTLRINLTEKFAP--AACVSCTGCQPPETEKR 177

[Close]

BLAST of Carg11539 vs. TrEMBL
Match: tr|W9RB84|W9RB84_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015872 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 4.4e-71
Identity = 132/190 (69.47%), Postives = 155/190 (81.58%), Query Frame = 0


Query: 1   MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD 60
           ML +R +S FK SP     +   SSS  P +E ++KS+GRKAVSF+L+TVTGGVALSALD
Sbjct: 1   MLGRRFISFFKNSP-----KSKLSSSKNPVDEEIDKSFGRKAVSFILITVTGGVALSALD 60

Query: 61  DLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120
           DLA+YHSCS KA+EK  NN+ I DA+GEPIVKGPWYNASLAVAHKR S+SCTFPVSGPQG
Sbjct: 61  DLALYHSCSRKALEKIGNNQQIKDALGEPIVKGPWYNASLAVAHKRQSVSCTFPVSGPQG 120

Query: 121 TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAA 180
           TG++QLKAVRNGED+W SFLRPRDWDI+IMDALLHVP N+ K QT RI++++ F P   A
Sbjct: 121 TGVLQLKAVRNGEDTWFSFLRPRDWDIIIMDALLHVPGNDEKHQTFRISVSDYFPPPPQA 180

Query: 181 CVACTDCQSP 191
           C ACTDC  P
Sbjct: 181 CTACTDCSKP 185

[Close]

BLAST of Carg11539 vs. TrEMBL
Match: tr|A0A2P4H2Y6|A0A2P4H2Y6_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_00103 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 9.2e-69
Identity = 133/195 (68.21%), Postives = 162/195 (83.08%), Query Frame = 0


Query: 1   MLAKRLLSIFKRSPTPNASRVACSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALD 60
           ML +RL+S+FK SPTP +     SSS +P +EG +KS+ RKAVSFVL+T+TGGVALSALD
Sbjct: 1   MLGRRLISLFKNSPTPTSQ---LSSSAKPVDEGKSKSFSRKAVSFVLITITGGVALSALD 60

Query: 61  DLAIYHSCSSKAIEKAKNNRAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQG 120
           DL IY+SCSSKA+EKA  N+A++DAIGEPIVKGPWYNASLAVAHKR S+SCTFPV GPQG
Sbjct: 61  DLVIYNSCSSKALEKASKNKALLDAIGEPIVKGPWYNASLAVAHKRKSVSCTFPVFGPQG 120

Query: 121 TGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTMRINLTEKFAPAAAA 180
           +G+ QLKAVRNG+DSW SFLRPRDW+ILIM+ALLHVP N+ K QT+RI+L++    ++ A
Sbjct: 121 SGVFQLKAVRNGDDSWFSFLRPRDWEILIMEALLHVPANDEKHQTLRISLSDFL--SSPA 180

Query: 181 CVACT--DCQSPEAE 194
           C ACT  DC+  E E
Sbjct: 181 CEACTTSDCKPQEPE 190

The following BLAST results are available for this feature:

BLAST of Carg11539 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954302.1	3.1e-100	96.41	uncharacterized protein LOC111456591 isoform X1 [Cucurbita moschata]	[more]
XP_022954303.1	8.9e-100	95.90	uncharacterized protein LOC111456591 isoform X2 [Cucurbita moschata]	[more]
XP_022991411.1	3.4e-99	95.38	uncharacterized protein LOC111488050 isoform X1 [Cucurbita maxima]	[more]
XP_022991412.1	9.9e-99	94.87	uncharacterized protein LOC111488050 isoform X2 [Cucurbita maxima]	[more]
XP_023547892.1	6.6e-95	93.37	uncharacterized protein LOC111806704 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg11539 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20390.2	1.3e-55	53.99	unknown protein	[more]

BLAST of Carg11539 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg11539 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KF26\|A0A0A0KF26_CUCSA	6.8e-88	84.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087990 PE=4 SV=1	[more]
tr\|A0A1S3CBF0\|A0A1S3CBF0_CUCME	5.7e-87	84.10	uncharacterized protein LOC103498925 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3CBW1\|A0A1S3CBW1_CUCME	6.1e-81	86.55	uncharacterized protein LOC103498925 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|W9RB84\|W9RB84_9ROSA	4.4e-71	69.47	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015872 PE=4 SV=1	[more]
tr\|A0A2P4H2Y6\|A0A2P4H2Y6_QUESU	9.2e-69	68.21	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_00103 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014807	Cyt_oxidase_assembly-1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11539-RA	Carg11539-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014807	Cytochrome oxidase assembly protein 1	PFAM	PF08695	Coa1	coord: 48..134 e-value: 7.0E-6 score: 25.7
None	No IPR available	PANTHER	PTHR35114	FAMILY NOT NAMED	coord: 1..194

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11539	Cla007063	Watermelon (97103) v1	carwmB0015
Carg11539	Csa6G087990	Cucumber (Chinese Long) v2	carcuB0012
Carg11539	MELO3C022392	Melon (DHL92) v3.5.1	carmeB0010
Carg11539	ClCG06G001410	Watermelon (Charleston Gray)	carwcgB0013
Carg11539	CSPI06G06980	Wild cucumber (PI 183967)	carcpiB0012
Carg11539	Cucsa.348860	Cucumber (Gy14) v1	carcgyB0012
Carg11539	CmaCh17G013710	Cucurbita maxima (Rimu)	carcmaB0020
Carg11539	CmoCh17G013250	Cucurbita moschata (Rifu)	carcmoB0021
Carg11539	Lsi09G018000	Bottle gourd (USVL1VR-Ls)	carlsiB011
Carg11539	Cp4.1LG12g10170	Cucurbita pepo (Zucchini)	carcpeB0018
Carg11539	CsGy6G007000	Cucumber (Gy14) v2	carcgybB0011
Carg11539	MELO3C022392.2	Melon (DHL92) v3.6.1	carmedB0011
Carg11539	CsaV3_6G007350	Cucumber (Chinese Long) v3	carcucB0012
Carg11539	Cla97C06G110710	Watermelon (97103) v2	carwmbB0011
Carg11539	Bhi12G002084	Wax gourd	carwgoB0013

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11539	Silver-seed gourd	carcarB014
Carg11539	Cucurbita maxima (Rimu)	carcmaB0023
Carg11539	Cucurbita moschata (Rifu)	carcmoB0024
Carg11539	Cucurbita pepo (Zucchini)	carcpeB0022