CmaCh17G013710 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G013710
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cytochrome oxidase complex assembly protein
Location	Cma_Chr17 : 9163107 .. 9166183 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGGAAGTAAGTAGCTGTGATGCAGATGAGGAGTGGGAGACCTAAACCTCACGGGAAAACACCCAAGACTTCCCTTTCCTATGCTTTTCATGATGCTCCCATCTCGAGCTCAAAAATTATTTAAGAAATATTTTATAAATAAATTTTTTTAATTATATTTATTATTCGACGTAATTTTATTTATATTTTGTAATTATAAGGGTTGGAATTTCAAGTTTTGATTTTTATCTTTCATTTGACAAACTGCTCAAAATCAGCCGACACTTTTCCTTTTTTTCTTTTTTCAAAGGAAAATTTCTATCGAGAAAGCGCCGCAGAACCATTTTGGTACTCGGAAGAGTGGAAGCGCTGAGCGGCTGAGGGAGCGAAGAACCCCCCACAAGCTGAAAATGCTGGCGAAAAGGTTCCTTTCCATATTCAAGCGCTCTCCAACTCCGAACGCTTCCAGGTGCGTCCTTCTTGCCATTCCGATTCTCGTTTTTTTCTGCTGTTTGTTCACGCTTCCATTTCTCGGATTGTTACACGAACAATTACTAACTCATCCACGAGCTTCCGTTCAACATGGAATTGATTGCTCGCATTTTTTTCAAAGAGATACATCTAGGTTCTTCACTTTTTACATGTTTTGATCGTATAACAGGTTTAATTTTCGCCTTATATGTTCGTTTAGAACTTGGAACTGTTTTATTTTGTTTTCTATGGAAAAGGAGATGTTGGGCTTTGATTCTTACAAGATTTTTCATCGATCTGTAACGGATAGAATGAAACTTGGCGATCTCTGATTAAGGGTTGCTTGCAGCAGTTCCGTAAGGCCATCGGAGGAAGGGGTGAATAAATCCTGGGGTCGCAAAGCAGTCTCCTTTGTACTTGTTACTGTTACTGGTGGTGTAGCCTTGAGTGCTTTAGATGACCTCGCCATTTATCATAGCTGTAGCAGGTATGTCTGACTTGTTAGGGATTTTCAAAATTTGGATGAATTATATCGTTTATGCTAATGGAAGTCTGAATTTGGAGAAAATAAACTATGTATCTTGGGGTTGCTTTTTATGCAACTGTTTTCTGCCATGTTTCACTTATTAGTGCTTTGAAGTTTTCGGAAACTCTCACCATTGCTATGTTGTTTTCAACCTTTAAAATTGGCTATGGTTTTACATTACTCAGGTCATTGTATTTTTTAAACCAAGCCTTTTCACTTTAGATGAACTAATGAATTGGATAGGATAATATCTCTAATACTCCGTGATGTTTACATCATTGCTACCAAAAGCGTTCAGTTATCAACCTTGGGGACGAGAATGCAAGAATTCTTTTTCTTTGCTTTCTTTTACCCATGCGTACTTTGCTTGCTCTGTTTTTGTTGGGGCTTTAAATCTTTGTCATTGGCCTAGTTACTCAGATTTTGTGAGGTCCCACATCGGTTGGAGAGTGAAATAAAACATTTCTTATAAGGGTGTAGAAACTTTTCCCTAGTAGATGCGTTTTAAAACCTTGAGGGGACGCCCTTGAAGGAAAAGCTCAAAGAGGATAATATTTGCTAACGGTAGACTTACAATGAATACTCACCAGCACACTTTTGGCTTGGTGTATCTATAACCGTTTTGACCTGAAAGCCTTTCTTTTCTTGGCTTGCTGTATTATATATAACTAAGGTCACCATTTTCAATAAGTTAGCTACCTTGTTACAATTAGAACGAGACCCTAGATTTGATCAATATTTTCGGAATGAATAGGAACATGACTTAGAACCAACTGAACTAGGACCAACTTTCCTGTTTGCATATCATTTAAAACTTAAAAGCATTGGAAAGTTCAGACAAGAGAGACGGACTTTGACCCCACACTCTGTCTCCTACCAAATATTTTCTTCACACCATTCGACATAAAGAAATCCCAATCAGCAAATCCAAAAGATCTCGTGCTTCCCTTTAGTGGATAAACTGAGCTTTTCTAATACAGAAGAGCATACAAAAAAGGAGCCAAACTATAACTTGACTAACTATACAAAAAAGGGCTCCACCAATGCAAAAGAATGAGGAATCGAGGTCTGATTGTTTCATGGGTTCTTAGATAAACATTTAATATCCTTGTTTGTATAATATAGATTTAATATATTTTCTCAAGTTATGCTTGCATCTTGCATTGTACCTTAAATACATTGGTTAAGAACTGGTGCTTTGTAATACTTTAAGAATGAGAAGCTTTTACGTGTGTACGTTTGTAGCAATTTTCTTTTAATTGCTGGCATTAGAATAATTTGATTTTATTGTATTACTTTTCCTATTGTATTACTTTTCCAGCAAAGCCATAGAGAAAGCCAAGAACAATAAAGCAATTATAGATGCTATTGGAGAACCCATTGTTAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCATAAGAGACATTCTCTATCCTGCACGTTTCCGGTATCAGGACCACAAGGCACGGGGATCGTCCAACTGAAGGCAGTTCGTAATGGAGGTCCTTGTTCAACTTTTTATTATCTTGTTCTATATTACTCTTTGGGGCGAGAAAGGTCGACCTCGTCTTTATTCTTTTTATAATGCTTTTTGAATTGTATTCTCAACAGAGGACTCCTGGATATCGTTTCTCCGGCCACGAGACTGGGACATCCTGATCATGGATGCTCTCCTACATGTTCCCGAAAACGAAGGTAAGCAGCAAACACTGCGTATTAATCTCACTGAGAAGTTTGCCCCTGCTGCTGCTCCTTGTGTCGCATGCACTGATTGTCAGTCTCCAACGGCAGAGAAGAGATGAAGTCAGCTAGTAAGTTTGCAGCTTCTCATTAGTTTTCTGTCCCGACATGATTTCGAGCTGACCTAAGGATTAAAATATTCGTTATACGCATCAAAATAATATTTTTCTGTGGAACCAGCTTAGAAGATTATTATCCAACAAGATTGCTAACATCAATCACTCTGTTTTTTATTTCATTTTTTTGTATGGATAGCGTTCATGTTATGGGCGCTGACATAAACTTTCATTTATACCACTTTGTGAGATTTCATTATACCCATGAGAAGAACACTTGTTGACATGCCGC

mRNA sequence

ATGGAAGAGGAAGTAAGTAGCTGTGATGCAGATGAGGAGAAAATTTCTATCGAGAAAGCGCCGCAGAACCATTTTGGTACTCGGAAGAGTGGAAGCGCTGAGCGGCTGAGGGAGCGAAGAACCCCCCACAAGCTGAAAATGCTGGCGAAAAGGTTCCTTTCCATATTCAAGCGCTCTCCAACTCCGAACGCTTCCAGCAGTTCCGTAAGGCCATCGGAGGAAGGGGTGAATAAATCCTGGGGTCGCAAAGCAGTCTCCTTTGTACTTGTTACTGTTACTGGTGGTGTAGCCTTGAGTGCTTTAGATGACCTCGCCATTTATCATAGCTGTAGCAGCAAAGCCATAGAGAAAGCCAAGAACAATAAAGCAATTATAGATGCTATTGGAGAACCCATTGTTAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCATAAGAGACATTCTCTATCCTGCACGTTTCCGGTATCAGGACCACAAGGCACGGGGATCGTCCAACTGAAGGCAGTTCGTAATGGAGAGGACTCCTGGATATCGTTTCTCCGGCCACGAGACTGGGACATCCTGATCATGGATGCTCTCCTACATGTTCCCGAAAACGAAGGTAAGCAGCAAACACTGCGTATTAATCTCACTGAGAAGTTTGCCCCTGCTGCTGCTCCTTGTGTCGCATGCACTGATTGTCAGTCTCCAACGGCAGAGAAGAGATGAAGTCAGCTAGTAAGTTTGCAGCTTCTCATTAGTTTTCTGTCCCGACATGATTTCGAGCTGACCTAAGGATTAAAATATTCGTTATACGCATCAAAATAATATTTTTCTGTGGAACCAGCTTAGAAGATTATTATCCAACAAGATTGCTAACATCAATCACTCTGTTTTTTATTTCATTTTTTTGTATGGATAGCGTTCATGTTATGGGCGCTGACATAAACTTTCATTTATACCACTTTGTGAGATTTCATTATACCCATGAGAAGAACACTTGTTGACATGCCGC

Coding sequence (CDS)

ATGGAAGAGGAAGTAAGTAGCTGTGATGCAGATGAGGAGAAAATTTCTATCGAGAAAGCGCCGCAGAACCATTTTGGTACTCGGAAGAGTGGAAGCGCTGAGCGGCTGAGGGAGCGAAGAACCCCCCACAAGCTGAAAATGCTGGCGAAAAGGTTCCTTTCCATATTCAAGCGCTCTCCAACTCCGAACGCTTCCAGCAGTTCCGTAAGGCCATCGGAGGAAGGGGTGAATAAATCCTGGGGTCGCAAAGCAGTCTCCTTTGTACTTGTTACTGTTACTGGTGGTGTAGCCTTGAGTGCTTTAGATGACCTCGCCATTTATCATAGCTGTAGCAGCAAAGCCATAGAGAAAGCCAAGAACAATAAAGCAATTATAGATGCTATTGGAGAACCCATTGTTAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCATAAGAGACATTCTCTATCCTGCACGTTTCCGGTATCAGGACCACAAGGCACGGGGATCGTCCAACTGAAGGCAGTTCGTAATGGAGAGGACTCCTGGATATCGTTTCTCCGGCCACGAGACTGGGACATCCTGATCATGGATGCTCTCCTACATGTTCCCGAAAACGAAGGTAAGCAGCAAACACTGCGTATTAATCTCACTGAGAAGTTTGCCCCTGCTGCTGCTCCTTGTGTCGCATGCACTGATTGTCAGTCTCCAACGGCAGAGAAGAGATGA

Protein sequence

MEEEVSSCDADEEKISIEKAPQNHFGTRKSGSAERLRERRTPHKLKMLAKRFLSIFKRSPTPNASSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTLRINLTEKFAPAAAPCVACTDCQSPTAEKR

Homology

[Close]

BLAST of CmaCh17G013710 vs. TrEMBL
Match: A0A0A0KF26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087990 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 3.7e-90
Identity = 165/191 (86.39%), Postives = 180/191 (94.24%), Query Frame = 1


Query: 47  MLAKRFLSIFKRSPTPNASSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAI 106
           MLAKRF SIFKRS TP+ASS+S++P+E  VNKSWGRKAVSFVL+TVTGGVALSALDDLAI
Sbjct: 1   MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI 60

Query: 107 YHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIV 166
           YHSCSSKAIEK +NN+A+IDAIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI+
Sbjct: 61  YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL 120

Query: 167 QLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTLRINLTEKFAPAAAPCVAC 226
           QLKAVRNGEDSWISFLRPRDWDIL+MDALL+VPENEGKQ+TLRINL+EKFAPAA  CV+C
Sbjct: 121 QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAA--CVSC 180

Query: 227 TDCQSPTAEKR 238
           TDCQ P  EKR
Sbjct: 181 TDCQPPETEKR 189

[Close]

BLAST of CmaCh17G013710 vs. TrEMBL
Match: W9RB84_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015872 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 7.7e-72
Identity = 132/186 (70.97%), Postives = 154/186 (82.80%), Query Frame = 1


Query: 47  MLAKRFLSIFKRSPTPNASSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAI 106
           ML +RF+S FK SP    SSS   P +E ++KS+GRKAVSF+L+TVTGGVALSALDDLA+
Sbjct: 1   MLGRRFISFFKNSPKSKLSSSK-NPVDEEIDKSFGRKAVSFILITVTGGVALSALDDLAL 60

Query: 107 YHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIV 166
           YHSCS KA+EK  NN+ I DA+GEPIVKGPWYNASLAVAHKR S+SCTFPVSGPQGTG++
Sbjct: 61  YHSCSRKALEKIGNNQQIKDALGEPIVKGPWYNASLAVAHKRQSVSCTFPVSGPQGTGVL 120

Query: 167 QLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTLRINLTEKFAPAAAPCVAC 226
           QLKAVRNGED+W SFLRPRDWDI+IMDALLHVP N+ K QT RI++++ F P    C AC
Sbjct: 121 QLKAVRNGEDTWFSFLRPRDWDIIIMDALLHVPGNDEKHQTFRISVSDYFPPPPQACTAC 180

Query: 227 TDCQSP 233
           TDC  P
Sbjct: 181 TDCSKP 185

[Close]

BLAST of CmaCh17G013710 vs. TrEMBL
Match: V4TYY0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022455mg PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.3e-68
Identity = 132/185 (71.35%), Postives = 153/185 (82.70%), Query Frame = 1


Query: 47  MLAKRFLSIFKRSPTPNASSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAI 106
           MLA+R  S FK  PT  ASS++    EE  +KS+GRKAVSFVL+TVTGGVALSALDDLAI
Sbjct: 1   MLARRLSSFFKSPPTSKASSAAKSVDEEK-SKSFGRKAVSFVLITVTGGVALSALDDLAI 60

Query: 107 YHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIV 166
           YHSCSSKA+EKA  N+A+IDAIGEPI KGPWYNASLAV H+RHS+SCTFPVSGPQG GI 
Sbjct: 61  YHSCSSKAMEKASKNQAVIDAIGEPIKKGPWYNASLAVTHQRHSVSCTFPVSGPQGNGIF 120

Query: 167 QLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTLRINLTEKFAPAAAPCVAC 226
           QLKAVRNG+  W +FL PRDW+ILIMDA  HVP NEG+QQTL+INL + F+P  + C AC
Sbjct: 121 QLKAVRNGDPGWFAFLGPRDWEILIMDARFHVPGNEGQQQTLKINLLDPFSP--SDCKAC 180

Query: 227 TDCQS 232
           TDC++
Sbjct: 181 TDCKT 182

[Close]

BLAST of CmaCh17G013710 vs. TrEMBL
Match: A9PGI1_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.9e-68
Identity = 131/191 (68.59%), Postives = 153/191 (80.10%), Query Frame = 1


Query: 47  MLAKRFLSIFKRSPTPNASSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAI 106
           MLA+RF+S+FK SP+   SS      E   NKS+GRKAV+FVLVTVTGGVALSALDDLAI
Sbjct: 1   MLARRFISLFKNSPSSQTSSGGKYLDEGKSNKSFGRKAVTFVLVTVTGGVALSALDDLAI 60

Query: 107 YHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIV 166
           YH CSSKA+EKA N++AI DAIGEPIVKGPWYNASLAVAHKR S+SCTFPVSGP G G+ 
Sbjct: 61  YHGCSSKAMEKASNSQAIKDAIGEPIVKGPWYNASLAVAHKRQSVSCTFPVSGPHGNGVF 120

Query: 167 QLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTLRINLTEKF-APAAAPCVA 226
           QLKAVRNG+DSW SF  PRDW+ILIM+ALLH+P NE +QQT+RI+L++ F +PA   C  
Sbjct: 121 QLKAVRNGDDSWFSFFLPRDWEILIMEALLHIPSNEERQQTMRISLSDSFSSPACNTCTE 180

Query: 227 CTDCQSPTAEK 237
           C   +S   EK
Sbjct: 181 CPQQESQNPEK 191

[Close]

BLAST of CmaCh17G013710 vs. TrEMBL
Match: B9GRD3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s25850g PE=4 SV=2)

HSP 1 Score: 264.6 bits (675), Expect = 1.1e-67
Identity = 130/192 (67.71%), Postives = 154/192 (80.21%), Query Frame = 1


Query: 47  MLAKRFLSIFKRSPTPNASSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAI 106
           MLA+RF+S+FK SP+   SS      E   NKS+GRKAV+FVLVTVTGGVALSALDDLAI
Sbjct: 1   MLARRFISLFKNSPSSQTSSRGKYLDEGKSNKSFGRKAVTFVLVTVTGGVALSALDDLAI 60

Query: 107 YHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIV 166
           YH CSSKA+EKA N++AI DAIGEPIVKGPWYNASLAVAHKR S+SCTFPVSGP G G+ 
Sbjct: 61  YHGCSSKAMEKASNSQAIKDAIGEPIVKGPWYNASLAVAHKRQSVSCTFPVSGPHGNGVF 120

Query: 167 QLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTLRINLTEKF-APAAAPCVA 226
           QLKAVRNG+DSW SF  PR+W+ILIM+ALLH+P NE +QQT+RI+L++ F +PA   C  
Sbjct: 121 QLKAVRNGDDSWFSFFLPRNWEILIMEALLHIPSNEERQQTMRISLSDSFSSPACNTCTE 180

Query: 227 CTDCQSPTAEKR 238
           C   +S   EK+
Sbjct: 181 CPQQESQNPEKK 192

[Close]

BLAST of CmaCh17G013710 vs. TAIR10
Match: AT2G20390.2 (AT2G20390.2 unknown protein)

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-56
Identity = 117/209 (55.98%), Postives = 138/209 (66.03%), Query Frame = 1


Query: 47  MLAKRFLSIFKRSPTPNASSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAI 106
           M A+RF S FK S T +   ++      G   S+GRKAVSFVL+TVTGGVALSALDDL+I
Sbjct: 1   MFARRFTSFFKGSSTSSPDKTA------GTLGSFGRKAVSFVLITVTGGVALSALDDLSI 60

Query: 107 YHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIV 166
           Y  CSSKA+EK  N+K +I+AIGEPI KGPWYNASLAV+H+RHS+SC+FPV GPQGTGI+
Sbjct: 61  YRGCSSKAMEKVMNSKVMIEAIGEPIEKGPWYNASLAVSHQRHSVSCSFPVIGPQGTGIL 120

Query: 167 QLKAVRNG------------------------------------EDSWISFLRPRDWDIL 220
            LKAVRNG                                    EDS   FL+ RDWDIL
Sbjct: 121 HLKAVRNGGKHSQTRTVTQRQNICVRYLHLPFFLLIGSPFLLGIEDSMFGFLQQRDWDIL 180

[Close]

BLAST of CmaCh17G013710 vs. NCBI nr
Match: gi|659120019|ref|XP_008459968.1| (PREDICTED: uncharacterized protein LOC103498925 isoform X1 [Cucumis melo])

HSP 1 Score: 345.9 bits (886), Expect = 5.6e-92
Identity = 172/206 (83.50%), Postives = 190/206 (92.23%), Query Frame = 1


Query: 32  SAERLRERRTPHKLKMLAKRFLSIFKRSPTPNASSSSVRPSEEGVNKSWGRKAVSFVLVT 91
           +++RL+E+ +P KLKMLAKRF SIFKRS TP ASS+S++PSE  VNKSWGRKAVSFVL+T
Sbjct: 6   NSQRLKEQGSP-KLKMLAKRFASIFKRSSTPYASSNSIKPSENEVNKSWGRKAVSFVLIT 65

Query: 92  VTGGVALSALDDLAIYHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSL 151
           VTGGVALSALDDLAIYHSCSSKAIEKA+NN+A+ DAIGEPI KGPWYNASLAVAHKRHSL
Sbjct: 66  VTGGVALSALDDLAIYHSCSSKAIEKARNNQAVKDAIGEPIAKGPWYNASLAVAHKRHSL 125

Query: 152 SCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTLRIN 211
           SCTFPVSGPQG GI+QLKAVRNGEDSWISFLRPRDWDIL+MDALL+VPENEGKQ+TLRIN
Sbjct: 126 SCTFPVSGPQGAGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRIN 185

Query: 212 LTEKFAPAAAPCVACTDCQSPTAEKR 238
           LTEKFAPAA  CV+CT CQ P  EKR
Sbjct: 186 LTEKFAPAA--CVSCTGCQPPETEKR 208

[Close]

BLAST of CmaCh17G013710 vs. NCBI nr
Match: gi|449445634|ref|XP_004140577.1| (PREDICTED: uncharacterized protein LOC101206927 [Cucumis sativus])

HSP 1 Score: 339.3 bits (869), Expect = 5.2e-90
Identity = 165/191 (86.39%), Postives = 180/191 (94.24%), Query Frame = 1


Query: 47  MLAKRFLSIFKRSPTPNASSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAI 106
           MLAKRF SIFKRS TP+ASS+S++P+E  VNKSWGRKAVSFVL+TVTGGVALSALDDLAI
Sbjct: 1   MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI 60

Query: 107 YHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIV 166
           YHSCSSKAIEK +NN+A+IDAIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI+
Sbjct: 61  YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL 120

Query: 167 QLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTLRINLTEKFAPAAAPCVAC 226
           QLKAVRNGEDSWISFLRPRDWDIL+MDALL+VPENEGKQ+TLRINL+EKFAPAA  CV+C
Sbjct: 121 QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAA--CVSC 180

Query: 227 TDCQSPTAEKR 238
           TDCQ P  EKR
Sbjct: 181 TDCQPPETEKR 189

[Close]

BLAST of CmaCh17G013710 vs. NCBI nr
Match: gi|659120021|ref|XP_008459969.1| (PREDICTED: uncharacterized protein LOC103498925 isoform X2 [Cucumis melo])

HSP 1 Score: 307.8 bits (787), Expect = 1.7e-80
Identity = 148/171 (86.55%), Postives = 160/171 (93.57%), Query Frame = 1


Query: 67  SSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAIYHSCSSKAIEKAKNNKAIID 126
           +S++PSE  VNKSWGRKAVSFVL+TVTGGVALSALDDLAIYHSCSSKAIEKA+NN+A+ D
Sbjct: 9   NSIKPSENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVKD 68

Query: 127 AIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIVQLKAVRNGEDSWISFLRPRD 186
           AIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQG GI+QLKAVRNGEDSWISFLRPRD
Sbjct: 69  AIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGAGILQLKAVRNGEDSWISFLRPRD 128

Query: 187 WDILIMDALLHVPENEGKQQTLRINLTEKFAPAAAPCVACTDCQSPTAEKR 238
           WDIL+MDALL+VPENEGKQ+TLRINLTEKFAPAA  CV+CT CQ P  EKR
Sbjct: 129 WDILMMDALLYVPENEGKQKTLRINLTEKFAPAA--CVSCTGCQPPETEKR 177

[Close]

BLAST of CmaCh17G013710 vs. NCBI nr
Match: gi|703081872|ref|XP_010091804.1| (hypothetical protein L484_015872 [Morus notabilis])

HSP 1 Score: 278.5 bits (711), Expect = 1.1e-71
Identity = 132/186 (70.97%), Postives = 154/186 (82.80%), Query Frame = 1


Query: 47  MLAKRFLSIFKRSPTPNASSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAI 106
           ML +RF+S FK SP    SSS   P +E ++KS+GRKAVSF+L+TVTGGVALSALDDLA+
Sbjct: 1   MLGRRFISFFKNSPKSKLSSSK-NPVDEEIDKSFGRKAVSFILITVTGGVALSALDDLAL 60

Query: 107 YHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIV 166
           YHSCS KA+EK  NN+ I DA+GEPIVKGPWYNASLAVAHKR S+SCTFPVSGPQGTG++
Sbjct: 61  YHSCSRKALEKIGNNQQIKDALGEPIVKGPWYNASLAVAHKRQSVSCTFPVSGPQGTGVL 120

Query: 167 QLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTLRINLTEKFAPAAAPCVAC 226
           QLKAVRNGED+W SFLRPRDWDI+IMDALLHVP N+ K QT RI++++ F P    C AC
Sbjct: 121 QLKAVRNGEDTWFSFLRPRDWDIIIMDALLHVPGNDEKHQTFRISVSDYFPPPPQACTAC 180

Query: 227 TDCQSP 233
           TDC  P
Sbjct: 181 TDCSKP 185

[Close]

BLAST of CmaCh17G013710 vs. NCBI nr
Match: gi|1009165641|ref|XP_015901150.1| (PREDICTED: uncharacterized protein LOC107434225 [Ziziphus jujuba])

HSP 1 Score: 273.1 bits (697), Expect = 4.6e-70
Identity = 130/184 (70.65%), Postives = 157/184 (85.33%), Query Frame = 1


Query: 47  MLAKRFLSIFKRSPTPNASSSSVRPSEEGVNKSWGRKAVSFVLVTVTGGVALSALDDLAI 106
           ML ++F+S FKRSP    SSS+    +EG NKS+GRKAVSFVL+TVTGG+ALSALDDLAI
Sbjct: 1   MLGRKFISFFKRSPKLQVSSSA--SPDEGNNKSFGRKAVSFVLITVTGGIALSALDDLAI 60

Query: 107 YHSCSSKAIEKAKNNKAIIDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIV 166
           YH CSSKA+EKA  N+AI DAIGEPI+KGPWYNASLAVAHKR+S+SC+FPVSGP GTG++
Sbjct: 61  YHGCSSKAMEKASENQAIKDAIGEPIMKGPWYNASLAVAHKRNSVSCSFPVSGPHGTGVL 120

Query: 167 QLKAVRNGEDSWISFLRPRDWDILIMDALLHVPENEGKQQTLRINLTEKFAPAAAPCVAC 226
           QLKA+RNGED+W SF RPRDWDI+IMDALLH+P NE KQQT+R+++++ F P A  C AC
Sbjct: 121 QLKAIRNGEDTWFSFFRPRDWDIIIMDALLHIPGNEEKQQTMRVSVSDYFPPPA--CTAC 180

Query: 227 TDCQ 231
           T C+
Sbjct: 181 TGCE 180

The following BLAST results are available for this feature:

BLAST of CmaCh17G013710 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh17G013710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF26_CUCSA	3.7e-90	86.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087990 PE=4 SV=1	[more]
W9RB84_9ROSA	7.7e-72	70.97	Uncharacterized protein OS=Morus notabilis GN=L484_015872 PE=4 SV=1	[more]
V4TYY0_9ROSI	2.3e-68	71.35	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022455mg PE=4 SV=1	[more]
A9PGI1_POPTR	3.9e-68	68.59	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
B9GRD3_POPTR	1.1e-67	67.71	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s25850g PE=4 SV=2	[more]

BLAST of CmaCh17G013710 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20390.2	1.1e-56	55.98	unknown protein	[more]

BLAST of CmaCh17G013710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120019\|ref\|XP_008459968.1\|	5.6e-92	83.50	PREDICTED: uncharacterized protein LOC103498925 isoform X1 [Cucumis melo]	[more]
gi\|449445634\|ref\|XP_004140577.1\|	5.2e-90	86.39	PREDICTED: uncharacterized protein LOC101206927 [Cucumis sativus]	[more]
gi\|659120021\|ref\|XP_008459969.1\|	1.7e-80	86.55	PREDICTED: uncharacterized protein LOC103498925 isoform X2 [Cucumis melo]	[more]
gi\|703081872\|ref\|XP_010091804.1\|	1.1e-71	70.97	hypothetical protein L484_015872 [Morus notabilis]	[more]
gi\|1009165641\|ref\|XP_015901150.1\|	4.6e-70	70.65	PREDICTED: uncharacterized protein LOC107434225 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014807	Cyt_oxidase_assembly-1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G013710.1	CmaCh17G013710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014807	Cytochrome oxidase assembly protein 1	PFAM	PF08695	Coa1	coord: 90..176 score: 5.
None	No IPR available	PANTHER	PTHR35114	FAMILY NOT NAMED	coord: 37..235 score: 2.1
None	No IPR available	PANTHER	PTHR35114:SF1	SUBFAMILY NOT NAMED	coord: 37..235 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G013710	Cucsa.348860	Cucumber (Gy14) v1	cgycmaB0951
CmaCh17G013710	Cla007063	Watermelon (97103) v1	cmawmB352
CmaCh17G013710	Csa6G087990	Cucumber (Chinese Long) v2	cmacuB367
CmaCh17G013710	MELO3C022392	Melon (DHL92) v3.5.1	cmameB315
CmaCh17G013710	ClCG06G001410	Watermelon (Charleston Gray)	cmawcgB322
CmaCh17G013710	CSPI06G06980	Wild cucumber (PI 183967)	cmacpiB371
CmaCh17G013710	CmoCh17G013250	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G013710	Lsi09G018000	Bottle gourd (USVL1VR-Ls)	cmalsiB333
CmaCh17G013710	Cp4.1LG12g10170	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G013710	MELO3C022392.2	Melon (DHL92) v3.6.1	cmamedB367
CmaCh17G013710	CsaV3_6G007350	Cucumber (Chinese Long) v3	cmacucB0439
CmaCh17G013710	Cla97C06G110710	Watermelon (97103) v2	cmawmbB369
CmaCh17G013710	Bhi12G002084	Wax gourd	cmawgoB0456
CmaCh17G013710	CsGy6G007000	Cucumber (Gy14) v2	cgybcmaB751
CmaCh17G013710	Carg11539	Silver-seed gourd	carcmaB0020

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G013710	Cucumber (Chinese Long) v3	cmacucB0429
CmaCh17G013710	Cucurbita maxima (Rimu)	cmacmaB384
CmaCh17G013710	Cucurbita moschata (Rifu)	cmacmoB376
CmaCh17G013710	Cucurbita pepo (Zucchini)	cmacpeB389
CmaCh17G013710	Silver-seed gourd	carcmaB1351