Csa6G087990 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G087990
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative uncharacterized protein P0627E03.19; contains IPR014807 (Cytochrome oxidase assembly protein 1)
Location	Chr6 : 5967629 .. 5970839 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCACGCATTGGTCTCGATGTATTAAGCAAAACATATATACACACACACATATCTATATATATAAACCTAGATCAAATTTCGAGTGGGCTGGCTATACACATTTATGAAATTAAAGGCAAACTCCTAACGATTGAGGAAGGAGCAAGGTAGTCCAAAGTTGAAAATGTTGGCGAAAAGGTTCGCTTCTATATTCAAGCGCTCTTCTACTCCACATGCTTCCAGGTGCGCCCTACGTGTAATGCCCATTTTCGTTATTTTCTCAGAATTTTACACCAACAGTTATTAACTCACTCACGAACTTCAGTTGAACGTGGAATCAATCGATTGCCCGCATCTTTTCAGTGATATAATATCTGGGTTCTTCAAATTTTCGATGTTTTGATCGTACAATAGGCTTAATTTCCCCCTTATTTACTCGTTTAGAACTTGGAATTGCTTTATTTGTTTTTATGAAAAAGGAAACGCTTGAATTGATTATTTCAAATTTTTTCATTGATTTTTAATGGATAGAATGGAATTTGGTAATCTCTGATTAAGGGTTGCTTGCAGCAATTCGATAAAGCCAACGGAGAATGAGGTGAATAAATCCTGGGGTCGGAAAGCCGTCTCCTTTGTGCTTATTACTGTTACTGGTGGTGTAGCTTTGAGTGCTTTAGATGACCTTGCCATTTATCATAGCTGTAGCAGGTATGTATTACTTGTTAGAGATTTCCAAATTTGGATGAATTATATTGTTAAAGCAAATGAATGTCTGAATTTGGCGCTTTGAAGTTCAAGGAAATCCATGTAGTAACACTAAAGTAAATTGGGGAATCTTGGACAAATTCATGATTAATTAGGATTAGAATTAGTTTACTTTTCCGTTTTCTAATAATTAGAGATCATTTTCCTTTGGTCATCTAAGGCTATGTTGTTATGTTGTTTTCAATCTCTGTCTTCTCACTGGATCAAATAATATCTCGTAGTAGTATTCGGTGATGTTACATTATTGTTATTGAACAAGCCTCAGTTGTCAACTTTGGCGGTTAGAGAATGAAAGCATTCTTTTGATCCTTGGGGTTTTTTTACCTATACATTATTTGCTTGTTCTGTTTCTGTTTAGGGGCTTTAAATCTTTGTTATTGCCCCATTTACAAAGGTATGGTAGTTTTCTGGATGAAATTGTGCAAATAGATGATAGATCTTCAGGGCTTTACTTCGATGCATTTTTCTTGATTTTAGAATTAGAAGCCTGACCCGACTCATCCAATTTTATCGGATGTTCCCTAAGGGACCTGACCTGATTCATCCGTTCCACGAAAACTCATCACCACCCTTGTTGGCTTGGTGTACCTATAACCAGCTTTGATCCACACTCTATTTCCAATCAAATATTTTGAGCTAAATATATAAGGTTTAAATCCACAAGATTATTGTCCTTCCTTTGGTGGTTAACTGAGTTTTTTTTAATGAGAGAATACAGAAGGGCAAACAAAAAGACAACCCAGCAAAAGGAGCCAAACTATAACCCAACTAATTGTACAACAAAGGTATCCACCATTGTAAAATAATAAGGCCTAAAGGATAATTCTAATTCTAATTCTAATTCTAATTCAATTTCATATATGAGTGTTTGGAATACATCATCAAGTGTTTAATTTTGGAAAAAAATTGGAGTATTTGACAATCTCTCAAAATAGCTCACATCTTAAAAGGAAATGCTCTCTCCTCTCTACGTAAAATTTTTATCCTATTTTTGTTGTTTTCTTTTATCCCCTGCTTTATTCTTGCAATAATAGTGGAAGGTTTTTTCCAACAAGGTTTTCATGAATCAATGATATTCTTTTGCTGTTGGTAGTTGGCGGGACTTATTTACATTATTTTATTATTTTCTCAGCAAAGCTATAGAGAAAGTCAGAAACAATCAAGCAGTCATAGATGCTATTGGTGAACCCATTGATAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCACAAGAGACACTCTCTATCCTGCACATTTCCAGTATCAGGACCACAAGGCACAGGGATCCTCCAACTGAAGGCAGTTCGTAATGGAGGTCAATACACTTTTCCTATCACCTGGTCCTCATTTCCCTTACTTGATTCAAGTTATAGTTTCAATAGAGAATTAGCAATAGATAAACAATTTTTTCTCGTTTCTTTCTTTTTTGGGGATTAGGAACCAAGCTTTTTTGAAGTTCTCTGTCATACGTATTTTTAGTTCATAAGCTTTTTTTTTAAGTTGAAGTATGGGATGACATTTGTGAAAGTTGTCTCTTTTCCTGAGCGATCCAACTTAGCTGGTGTATCTTCAATCCGATGCATTTGGAAAAGGGTTTTCTGGATTAGTGGATTGTTTTAGGTAAACCGGGAAGATTCTAAAGGTAATGGTAGGTATAAAATGTTTTTCTATTAGTAAAATCTTTTAATTTTCAAACCATAATGGTAACTAGGCAGATTTATTTTCTTATCTATTTTCTACCTGCAATTAGTCTAGTCTGATCCTTATACTCGCGTGTATCAATTCTTTAGATTTTACTTTAGCATCAAGATAATACTCAAAATGAAATCTTGTCGCATTTTGTTCCTTTTACATGAATTATCATCCTCTTTCAGCTTTTACTATTTTGTAATATATATATTTATATATTACCCTTTAGGTGAGAGAAGTCTTTTCGTCTGTTATAAACTTTTTGAATGGTAATACTAAGTTGGAATATCTCTACAGAGGATTCCTGGATTTCTTTTCTCCGGCCTCGGGACTGGGACATTCTGATGATGGATGCTCTCCTTTATGTTCCTGAAAACGAAGGTAAGCAGAAAACTTTGCGTATTAATCTCAGCGAGAAGTTTGCTCCTGCTGCTTGTGTCTCATGCACCGACTGTCAGCCTCCAGAGACAGAGAAGAGATGAAGTTAGCTTTTTATGGATATTATGAAACTATTGTCATAATATCCTTTATGAAGTTGCTTTCTATTAGTTTTCTGTCCCGACATGATTTTGAGCTAACCGAAGGGTCGAAGTATTCGTTATCCCCACCAAAATAATAATTTTCTTTGAGGTTGAGTTCAAACCGCGGTAGAAGATTTGTTATTATACAACCTTGCTGACATTAAATGTGGCAAAGTTATTATGGTTATACCGTAAAATCCAATTTGTAAAAGAAAAACAGTAACTATTTATCTGATTTTTTTGTTCTTA

mRNA sequence

ATGTTGGCGAAAAGGTTCGCTTCTATATTCAAGCGCTCTTCTACTCCACATGCTTCCAGCAATTCGATAAAGCCAACGGAGAATGAGGTGAATAAATCCTGGGGTCGGAAAGCCGTCTCCTTTGTGCTTATTACTGTTACTGGTGGTGTAGCTTTGAGTGCTTTAGATGACCTTGCCATTTATCATAGCTGTAGCAGCAAAGCTATAGAGAAAGTCAGAAACAATCAAGCAGTCATAGATGCTATTGGTGAACCCATTGATAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCACAAGAGACACTCTCTATCCTGCACATTTCCAGTATCAGGACCACAAGGCACAGGGATCCTCCAACTGAAGGCAGTTCGTAATGGAGAGGATTCCTGGATTTCTTTTCTCCGGCCTCGGGACTGGGACATTCTGATGATGGATGCTCTCCTTTATGTTCCTGAAAACGAAGGTAAGCAGAAAACTTTGCGTATTAATCTCAGCGAGAAGTTTGCTCCTGCTGCTTGTGTCTCATGCACCGACTGTCAGCCTCCAGAGACAGAGAAGAGATGA

Coding sequence (CDS)

ATGTTGGCGAAAAGGTTCGCTTCTATATTCAAGCGCTCTTCTACTCCACATGCTTCCAGCAATTCGATAAAGCCAACGGAGAATGAGGTGAATAAATCCTGGGGTCGGAAAGCCGTCTCCTTTGTGCTTATTACTGTTACTGGTGGTGTAGCTTTGAGTGCTTTAGATGACCTTGCCATTTATCATAGCTGTAGCAGCAAAGCTATAGAGAAAGTCAGAAACAATCAAGCAGTCATAGATGCTATTGGTGAACCCATTGATAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCACAAGAGACACTCTCTATCCTGCACATTTCCAGTATCAGGACCACAAGGCACAGGGATCCTCCAACTGAAGGCAGTTCGTAATGGAGAGGATTCCTGGATTTCTTTTCTCCGGCCTCGGGACTGGGACATTCTGATGATGGATGCTCTCCTTTATGTTCCTGAAAACGAAGGTAAGCAGAAAACTTTGCGTATTAATCTCAGCGAGAAGTTTGCTCCTGCTGCTTGTGTCTCATGCACCGACTGTCAGCCTCCAGAGACAGAGAAGAGATGA

Protein sequence

MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR*

Homology

[Close]

BLAST of Csa6G087990 vs. TrEMBL
Match: A0A0A0KF26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087990 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 7.9e-104
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1


Query: 1   MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI 60
           MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI
Sbjct: 1   MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI 60

Query: 61  YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL 120
           YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL
Sbjct: 61  YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL 120

Query: 121 QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTD 180
           QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTD
Sbjct: 121 QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTD 180

Query: 181 CQPPETEKR 190
           CQPPETEKR
Sbjct: 181 CQPPETEKR 189

[Close]

BLAST of Csa6G087990 vs. TrEMBL
Match: W9RB84_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015872 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.1e-68
Identity = 129/186 (69.35%), Postives = 153/186 (82.26%), Query Frame = 1


Query: 1   MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI 60
           ML +RF S FK S     SS+   P + E++KS+GRKAVSF+LITVTGGVALSALDDLA+
Sbjct: 1   MLGRRFISFFKNSPKSKLSSSK-NPVDEEIDKSFGRKAVSFILITVTGGVALSALDDLAL 60

Query: 61  YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL 120
           YHSCS KA+EK+ NNQ + DA+GEPI KGPWYNASLAVAHKR S+SCTFPVSGPQGTG+L
Sbjct: 61  YHSCSRKALEKIGNNQQIKDALGEPIVKGPWYNASLAVAHKRQSVSCTFPVSGPQGTGVL 120

Query: 121 QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKF--APAACVSC 180
           QLKAVRNGED+W SFLRPRDWDI++MDALL+VP N+ K +T RI++S+ F   P AC +C
Sbjct: 121 QLKAVRNGEDTWFSFLRPRDWDIIIMDALLHVPGNDEKHQTFRISVSDYFPPPPQACTAC 180

Query: 181 TDCQPP 185
           TDC  P
Sbjct: 181 TDCSKP 185

[Close]

BLAST of Csa6G087990 vs. TrEMBL
Match: A0A151T5V5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_016943 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.0e-68
Identity = 134/187 (71.66%), Postives = 152/187 (81.28%), Query Frame = 1


Query: 1   MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI 60
           MLAKR +S+ K S  PH S+ S K  + E  K +GRKAVSFVLIT+TGGVALSALDDLAI
Sbjct: 1   MLAKRLSSLLKLSPKPHFST-STKKVDEETGKYYGRKAVSFVLITITGGVALSALDDLAI 60

Query: 61  YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL 120
           YH CSSKA+EKV  NQAVIDAIGEPI KGPWYNASLAVAHKRHSLSC+FPVSGPQGTG+L
Sbjct: 61  YHGCSSKAMEKVSKNQAVIDAIGEPIVKGPWYNASLAVAHKRHSLSCSFPVSGPQGTGVL 120

Query: 121 QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTD 180
           QLKAVRNGED+W SF   RDWDIL+MDALL+VPENE + +TLRINL ++  P +C SC  
Sbjct: 121 QLKAVRNGEDTWSSFFLSRDWDILIMDALLHVPENEERNRTLRINLIDR--PFSCTSCPG 180

Query: 181 CQPPETE 188
             P  +E
Sbjct: 181 STPHPSE 184

[Close]

BLAST of Csa6G087990 vs. TrEMBL
Match: A0A061DNP0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_003906 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 9.2e-68
Identity = 129/189 (68.25%), Postives = 155/189 (82.01%), Query Frame = 1


Query: 1   MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI 60
           M+     S FK S +   SS      E E +KS+ RKAVSFVLITVTGGVALSALDDLAI
Sbjct: 1   MIWSTLVSFFKNSPSSKVSSTGNSVNE-EKSKSFVRKAVSFVLITVTGGVALSALDDLAI 60

Query: 61  YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL 120
           YH CSSKA+EK   NQA+IDAIGEPI+KGPWYNASLAVAHKRHS+SCTFPVSGPQGTG+L
Sbjct: 61  YHGCSSKAMEKASKNQAIIDAIGEPIEKGPWYNASLAVAHKRHSVSCTFPVSGPQGTGVL 120

Query: 121 QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTD 180
           QLKAVRNG+D+W S++ PRDW+IL+M+ALL+VP NE KQ+TLRI+L EK    AC++CT+
Sbjct: 121 QLKAVRNGDDNWYSYILPRDWEILIMEALLHVPGNEEKQQTLRISLLEKTPSPACIACTE 180

Query: 181 CQPPETEKR 190
           C+P ++EK+
Sbjct: 181 CRPQQSEKK 188

[Close]

BLAST of Csa6G087990 vs. TrEMBL
Match: A0A0B2NZG9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_002489 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-67
Identity = 130/187 (69.52%), Postives = 153/187 (81.82%), Query Frame = 1


Query: 1   MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI 60
           MLAKR +S FK S  P  S+ S K  + E  K +G+KAVSF LIT+TGGVALSALDDLAI
Sbjct: 1   MLAKRLSSFFKLSPKPQIST-STKKVDEETGKYYGKKAVSFFLITITGGVALSALDDLAI 60

Query: 61  YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL 120
           YH CS KA+EKV  NQA+IDAIGEPI KGPWYNASL+VAHKRHS+SC+FPVSGPQGTG+L
Sbjct: 61  YHGCSRKAMEKVSKNQALIDAIGEPIVKGPWYNASLSVAHKRHSVSCSFPVSGPQGTGVL 120

Query: 121 QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTD 180
           QLKAVRNG+D+W SF  PRDWDIL+MDALL+VP NE K +TLRINL++K  P +C +CT+
Sbjct: 121 QLKAVRNGDDTWSSFFLPRDWDILIMDALLHVPGNEEKHQTLRINLADK--PLSCTTCTE 180

Query: 181 CQPPETE 188
           C P  +E
Sbjct: 181 CTPHPSE 184

[Close]

BLAST of Csa6G087990 vs. TAIR10
Match: AT2G20390.2 (AT2G20390.2 unknown protein)

HSP 1 Score: 214.2 bits (544), Expect = 7.2e-56
Identity = 120/226 (53.10%), Postives = 145/226 (64.16%), Query Frame = 1


Query: 1   MLAKRFASIFKRSST--PHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDL 60
           M A+RF S FK SST  P  ++ ++         S+GRKAVSFVLITVTGGVALSALDDL
Sbjct: 1   MFARRFTSFFKGSSTSSPDKTAGTLG--------SFGRKAVSFVLITVTGGVALSALDDL 60

Query: 61  AIYHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTG 120
           +IY  CSSKA+EKV N++ +I+AIGEPI+KGPWYNASLAV+H+RHS+SC+FPV GPQGTG
Sbjct: 61  SIYRGCSSKAMEKVMNSKVMIEAIGEPIEKGPWYNASLAVSHQRHSVSCSFPVIGPQGTG 120

Query: 121 ILQLKAVRNG------------------------------------EDSWISFLRPRDWD 180
           IL LKAVRNG                                    EDS   FL+ RDWD
Sbjct: 121 ILHLKAVRNGGKHSQTRTVTQRQNICVRYLHLPFFLLIGSPFLLGIEDSMFGFLQQRDWD 180

Query: 181 ILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEK 189
           IL+MDAL++VP NEG Q+TLRIN+++   P+        +P E EK
Sbjct: 181 ILIMDALVHVPSNEGPQQTLRINVTDIVDPSPGTHDKPLEPLEPEK 218

[Close]

BLAST of Csa6G087990 vs. NCBI nr
Match: gi|449445634|ref|XP_004140577.1| (PREDICTED: uncharacterized protein LOC101206927 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 1.1e-103
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1


Query: 1   MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI 60
           MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI
Sbjct: 1   MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI 60

Query: 61  YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL 120
           YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL
Sbjct: 61  YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL 120

Query: 121 QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTD 180
           QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTD
Sbjct: 121 QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTD 180

Query: 181 CQPPETEKR 190
           CQPPETEKR
Sbjct: 181 CQPPETEKR 189

[Close]

BLAST of Csa6G087990 vs. NCBI nr
Match: gi|659120019|ref|XP_008459968.1| (PREDICTED: uncharacterized protein LOC103498925 isoform X1 [Cucumis melo])

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-98
Identity = 181/189 (95.77%), Postives = 184/189 (97.35%), Query Frame = 1


Query: 1   MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI 60
           MLAKRFASIFKRSSTP+ASSNSIKP+ENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI
Sbjct: 20  MLAKRFASIFKRSSTPYASSNSIKPSENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI 79

Query: 61  YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL 120
           YHSCSSKAIEK RNNQAV DAIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQG GIL
Sbjct: 80  YHSCSSKAIEKARNNQAVKDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGAGIL 139

Query: 121 QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTD 180
           QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINL+EKFAPAACVSCT 
Sbjct: 140 QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLTEKFAPAACVSCTG 199

Query: 181 CQPPETEKR 190
           CQPPETEKR
Sbjct: 200 CQPPETEKR 208

[Close]

BLAST of Csa6G087990 vs. NCBI nr
Match: gi|659120021|ref|XP_008459969.1| (PREDICTED: uncharacterized protein LOC103498925 isoform X2 [Cucumis melo])

HSP 1 Score: 332.4 bits (851), Expect = 5.1e-88
Identity = 162/169 (95.86%), Postives = 164/169 (97.04%), Query Frame = 1


Query: 21  NSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKVRNNQAVID 80
           NSIKP+ENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEK RNNQAV D
Sbjct: 9   NSIKPSENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVKD 68

Query: 81  AIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRD 140
           AIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQG GILQLKAVRNGEDSWISFLRPRD
Sbjct: 69  AIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGAGILQLKAVRNGEDSWISFLRPRD 128

Query: 141 WDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR 190
           WDILMMDALLYVPENEGKQKTLRINL+EKFAPAACVSCT CQPPETEKR
Sbjct: 129 WDILMMDALLYVPENEGKQKTLRINLTEKFAPAACVSCTGCQPPETEKR 177

[Close]

BLAST of Csa6G087990 vs. NCBI nr
Match: gi|703081872|ref|XP_010091804.1| (hypothetical protein L484_015872 [Morus notabilis])

HSP 1 Score: 267.7 bits (683), Expect = 1.6e-68
Identity = 129/186 (69.35%), Postives = 153/186 (82.26%), Query Frame = 1


Query: 1   MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI 60
           ML +RF S FK S     SS+   P + E++KS+GRKAVSF+LITVTGGVALSALDDLA+
Sbjct: 1   MLGRRFISFFKNSPKSKLSSSK-NPVDEEIDKSFGRKAVSFILITVTGGVALSALDDLAL 60

Query: 61  YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL 120
           YHSCS KA+EK+ NNQ + DA+GEPI KGPWYNASLAVAHKR S+SCTFPVSGPQGTG+L
Sbjct: 61  YHSCSRKALEKIGNNQQIKDALGEPIVKGPWYNASLAVAHKRQSVSCTFPVSGPQGTGVL 120

Query: 121 QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKF--APAACVSC 180
           QLKAVRNGED+W SFLRPRDWDI++MDALL+VP N+ K +T RI++S+ F   P AC +C
Sbjct: 121 QLKAVRNGEDTWFSFLRPRDWDIIIMDALLHVPGNDEKHQTFRISVSDYFPPPPQACTAC 180

Query: 181 TDCQPP 185
           TDC  P
Sbjct: 181 TDCSKP 185

[Close]

BLAST of Csa6G087990 vs. NCBI nr
Match: gi|1012351222|gb|KYP62411.1| (hypothetical protein KK1_016943 [Cajanus cajan])

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-67
Identity = 134/187 (71.66%), Postives = 152/187 (81.28%), Query Frame = 1


Query: 1   MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAI 60
           MLAKR +S+ K S  PH S+ S K  + E  K +GRKAVSFVLIT+TGGVALSALDDLAI
Sbjct: 1   MLAKRLSSLLKLSPKPHFST-STKKVDEETGKYYGRKAVSFVLITITGGVALSALDDLAI 60

Query: 61  YHSCSSKAIEKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL 120
           YH CSSKA+EKV  NQAVIDAIGEPI KGPWYNASLAVAHKRHSLSC+FPVSGPQGTG+L
Sbjct: 61  YHGCSSKAMEKVSKNQAVIDAIGEPIVKGPWYNASLAVAHKRHSLSCSFPVSGPQGTGVL 120

Query: 121 QLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTD 180
           QLKAVRNGED+W SF   RDWDIL+MDALL+VPENE + +TLRINL ++  P +C SC  
Sbjct: 121 QLKAVRNGEDTWSSFFLSRDWDILIMDALLHVPENEERNRTLRINLIDR--PFSCTSCPG 180

Query: 181 CQPPETE 188
             P  +E
Sbjct: 181 STPHPSE 184

The following BLAST results are available for this feature:

BLAST of Csa6G087990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF26_CUCSA	7.9e-104	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087990 PE=4 SV=1	[more]
W9RB84_9ROSA	1.1e-68	69.35	Uncharacterized protein OS=Morus notabilis GN=L484_015872 PE=4 SV=1	[more]
A0A151T5V5_CAJCA	7.0e-68	71.66	Uncharacterized protein OS=Cajanus cajan GN=KK1_016943 PE=4 SV=1	[more]
A0A061DNP0_THECC	9.2e-68	68.25	Uncharacterized protein OS=Theobroma cacao GN=TCM_003906 PE=4 SV=1	[more]
A0A0B2NZG9_GLYSO	1.2e-67	69.52	Uncharacterized protein OS=Glycine soja GN=glysoja_002489 PE=4 SV=1	[more]

BLAST of Csa6G087990 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20390.2	7.2e-56	53.10	unknown protein	[more]

BLAST of Csa6G087990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445634\|ref\|XP_004140577.1\|	1.1e-103	100.00	PREDICTED: uncharacterized protein LOC101206927 [Cucumis sativus]	[more]
gi\|659120019\|ref\|XP_008459968.1\|	1.4e-98	95.77	PREDICTED: uncharacterized protein LOC103498925 isoform X1 [Cucumis melo]	[more]
gi\|659120021\|ref\|XP_008459969.1\|	5.1e-88	95.86	PREDICTED: uncharacterized protein LOC103498925 isoform X2 [Cucumis melo]	[more]
gi\|703081872\|ref\|XP_010091804.1\|	1.6e-68	69.35	hypothetical protein L484_015872 [Morus notabilis]	[more]
gi\|1012351222\|gb\|KYP62411.1\|	1.0e-67	71.66	hypothetical protein KK1_016943 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014807	Cyt_oxidase_assembly-1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU095994	cucumber EST collection version 3.0	transcribed_cluster
CU115503	cucumber EST collection version 3.0	transcribed_cluster
CU117546	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G087990.1	Csa6G087990.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU095994	CU095994	transcribed_cluster
CU117546	CU117546	transcribed_cluster
CU115503	CU115503	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014807	Cytochrome oxidase assembly protein 1	PFAM	PF08695	Coa1	coord: 49..130 score: 1.
None	No IPR available	PANTHER	PTHR35114	FAMILY NOT NAMED	coord: 1..187 score: 1.9
None	No IPR available	PANTHER	PTHR35114:SF1	SUBFAMILY NOT NAMED	coord: 1..187 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G087990	Cla007063	Watermelon (97103) v1	cuwmB537
Csa6G087990	MELO3C022392	Melon (DHL92) v3.5.1	cumeB442
Csa6G087990	ClCG06G001410	Watermelon (Charleston Gray)	cuwcgB476
Csa6G087990	Lsi09G018000	Bottle gourd (USVL1VR-Ls)	culsiB402
Csa6G087990	MELO3C022392.2	Melon (DHL92) v3.6.1	cumedB422
Csa6G087990	Cla97C06G110710	Watermelon (97103) v2	cuwmbB468
Csa6G087990	Bhi12G002084	Wax gourd	cuwgoB533
Csa6G087990	CSPI06G06980	Wild cucumber (PI 183967)	cpicuB314
Csa6G087990	Cucsa.348860	Cucumber (Gy14) v1	cgycuB490
Csa6G087990	CmaCh17G013710	Cucurbita maxima (Rimu)	cmacuB367
Csa6G087990	CmoCh17G013250	Cucurbita moschata (Rifu)	cmocuB358
Csa6G087990	Cp4.1LG12g10170	Cucurbita pepo (Zucchini)	cpecuB142
Csa6G087990	CsGy6G007000	Cucumber (Gy14) v2	cgybcuB282
Csa6G087990	Carg11539	Silver-seed gourd	carcuB0012

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G087990	Cucumber (Chinese Long) v2	cucuB118
Csa6G087990	Cucurbita maxima (Rimu)	cmacuB903
Csa6G087990	Cucurbita moschata (Rifu)	cmocuB889
Csa6G087990	Cucurbita pepo (Zucchini)	cpecuB322
Csa6G087990	Silver-seed gourd	carcuB0995