CsaV3_6G008950 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAACTATTTCTCCATTTGTCAACTTTGTGCAGTTCATTTGTTTCCAACTATAAATATTTCCACACTTCTTGTTTCTTCATATCCATCGTCCCTTTCCATTCCAATTCCCTCACTAATTTTCTCATTGTTTAATTTTTATCATCCATGGCTAGTCAACTCCCACGTCCATGGTTCCGTTTGGGCTCGATGACTCGACCAACCACCGCTCCAAACCCGGAACAATCTCGTCCAGTCCCAGCTCGAGTTCGACCACCCATAATCCGCCCCGCCGCCTTGACAGACCCGGCAGAACCCACCACCCCACAACGCTCAAAATCCCCCCCTCCCTTCTCTCGCCCTGCCTCATTAACTCCTCCCGTGAAAAGCTCACCATCGCCACTGCGTGCTCTTCCGTCGCCATCAACCGGACAGGGTGGTGGGACTGCAATGGCGTCCCCAGCCGTGATTCCTAGTAGCCCGAAGGAAAAAAGTTCTTCAGTTGTAGGGTCTCCAAAGGGAAGAAGTACTTCTTCGGTTGTAGGGTCTCCAAAGGGAAGAAGTACTTCTTCGGTTGTAGGGTCTCCGAAGACGATTAATAGTAAACAGCCAAGTCCGTTTCCGTCTCCTTCGATTCCGAAGTCAATACCGTCGGTTCCAACACCTTATCAGTCTCCGAAACCGAAAACCTTTGTTTCTCCACCGTCACCACTGGTTTTACCGCCGCCGCAGTTGCAGTCTGTTGCTGAGACCAAAGATGAGACTATTCCTCAAGAGGTTAGTGTATGTAACTTTACTATTGAGTTATTTTATTTTATTCCCAAAGGTTCTTTAATTTTGATTGATTGGGATATTGTTAATATTCCTTTAAGATTGTATCCAATAAATTTTTATATGGTTTATATTTTTCCACGTACTTGTTTATCTCCCCTTAATTCCTTACCCATCTTTGTTTTACTTTGTTTTTTAATCTTTAAATACAATTATTGTAACATGTGAGAACATGATTTTGCTAATTGAGGAGAGTGCAAGAACAGTTAATATTACCATGTAAAATAATTTATGAATTTCCCAAATGGTTATTTAAACATTTATTTATTCTTTTTAAAGAGAATGAAGCATTAACATAAACTAAACAAAAAACATCTACATATATTTTGTTTTTGTAATGTTTTAAAGAGTTCAGAAAAGATGGCTTCTTTTTTTAACAAGTTTATAACGTGGTAAATAATAATTAAGTAATATAATGAATTGTATATGTAGTTTGAAATGCATCCAAATGTTATCTTTTTAATTTCAGTTAGATCAATAATTCAAATGCTAATTATTCATAAAAACAAGTTGAAAATTAAAGTGTTGACATTTTTGGAATATGAGTATAGAGGAATAAATTCCAAAGCCATGTAAGTTATTGATATATAAACAAGAAGTGGCGTCTCGATGCCACCTCCTTGAGTCTTGTTGCTTAGCTGCTCCAATCGATACACAGGTAGAACGAAAGACGGTTGTATTCCAAAAAGTGATGGACAAGCCTTCACAAGCGGAAGAACATCATCTCCAGAATATCACAAATTACCGTACTCATACTTCTGAATTTGACAAAAATGGGAAGCAAGAATCAAACAAAGGTGATGATGGGGATCGTGATGAGAAAGAAACTAGCAGCAAAAAGAAAGGAGCAACAATTGGAGGTAATAATAATTATAAAAGAACAGCATTTGATCACGATAACAACACAAGAGTTATAACAATGGCTGGTGAAAACAAAGGAGCTTTCATGGAAATAAATCTATCATCAGAAAAAAACAACAGCCGTCATCAACAGCAACAACAAATTCAAGACAACAACACTGTTGTTAGTGTTAAAGACAGTAACAAAAGTATAAACAAAACTAAGGGGATTAAGACTCGAAATGTTTTGCCTATGAGAGCCTTTTTTAACAGCAATGTTCAAGGGATAAACAATTCTATTCTTATGGACTCCAAATTTAGTCACCATGATCCTGGAATTCATCTTGTTTTTTCATCCCTCCCAACATCTCCTGATGACGAAGATGATCAACAACACCAATGAACAACAACTTCTTTGCTTTTATATTCATAAATTTATGTCTCTTATAAGTTAATTATGTGTCGTTTTTTTAAAAAAATTATATATATTTGCTATTGCTTTGAGAGAATAACATATATGCGAGGTAATTGATAGATATGATTCAGCCTAGAGATTGAGAGTTTGTTCTTGTTTGTTAATTATTGTTTAGTTTAATGCATTTAATAAATGGGCTGACATTTCTATTTAACTTTTATCTATGCACACAACCAAAGTTCAAAACAAAAATTAATGTATCCAGATTTCAATTTATGGAAAATCGACATTTATGGAAATT ATGGCTAGTCAACTCCCACGTCCATGGTTCCGTTTGGGCTCGATGACTCGACCAACCACCGCTCCAAACCCGGAACAATCTCGTCCAGTCCCAGCTCGAGTTCGACCACCCATAATCCGCCCCGCCGCCTTGACAGACCCGGCAGAACCCACCACCCCACAACGCTCAAAATCCCCCCCTCCCTTCTCTCGCCCTGCCTCATTAACTCCTCCCGTGAAAAGCTCACCATCGCCACTGCGTGCTCTTCCGTCGCCATCAACCGGACAGGGTGGTGGGACTGCAATGGCGTCCCCAGCCGTGATTCCTAGTAGCCCGAAGGAAAAAAGTTCTTCAGTTGTAGGGTCTCCAAAGGGAAGAAGTACTTCTTCGGTTGTAGGGTCTCCAAAGGGAAGAAGTACTTCTTCGGTTGTAGGGTCTCCGAAGACGATTAATAGTAAACAGCCAAGTCCGTTTCCGTCTCCTTCGATTCCGAAGTCAATACCGTCGGTTCCAACACCTTATCAGTCTCCGAAACCGAAAACCTTTGTTTCTCCACCGTCACCACTGGTTTTACCGCCGCCGCAGTTGCAGTCTGTTGCTGAGACCAAAGATGAGACTATTCCTCAAGAGGTAGAACGAAAGACGGTTGTATTCCAAAAAGTGATGGACAAGCCTTCACAAGCGGAAGAACATCATCTCCAGAATATCACAAATTACCGTACTCATACTTCTGAATTTGACAAAAATGGGAAGCAAGAATCAAACAAAGGTGATGATGGGGATCGTGATGAGAAAGAAACTAGCAGCAAAAAGAAAGGAGCAACAATTGGAGGTAATAATAATTATAAAAGAACAGCATTTGATCACGATAACAACACAAGAGTTATAACAATGGCTGGTGAAAACAAAGGAGCTTTCATGGAAATAAATCTATCATCAGAAAAAAACAACAGCCGTCATCAACAGCAACAACAAATTCAAGACAACAACACTGTTGTTAGTGTTAAAGACAGTAACAAAAGTATAAACAAAACTAAGGGGATTAAGACTCGAAATGTTTTGCCTATGAGAGCCTTTTTTAACAGCAATGTTCAAGGGATAAACAATTCTATTCTTATGGACTCCAAATTTAGTCACCATGATCCTGGAATTCATCTTGTTTTTTCATCCCTCCCAACATCTCCTGATGACGAAGATGATCAACAACACCAATGA ATGGCTAGTCAACTCCCACGTCCATGGTTCCGTTTGGGCTCGATGACTCGACCAACCACCGCTCCAAACCCGGAACAATCTCGTCCAGTCCCAGCTCGAGTTCGACCACCCATAATCCGCCCCGCCGCCTTGACAGACCCGGCAGAACCCACCACCCCACAACGCTCAAAATCCCCCCCTCCCTTCTCTCGCCCTGCCTCATTAACTCCTCCCGTGAAAAGCTCACCATCGCCACTGCGTGCTCTTCCGTCGCCATCAACCGGACAGGGTGGTGGGACTGCAATGGCGTCCCCAGCCGTGATTCCTAGTAGCCCGAAGGAAAAAAGTTCTTCAGTTGTAGGGTCTCCAAAGGGAAGAAGTACTTCTTCGGTTGTAGGGTCTCCAAAGGGAAGAAGTACTTCTTCGGTTGTAGGGTCTCCGAAGACGATTAATAGTAAACAGCCAAGTCCGTTTCCGTCTCCTTCGATTCCGAAGTCAATACCGTCGGTTCCAACACCTTATCAGTCTCCGAAACCGAAAACCTTTGTTTCTCCACCGTCACCACTGGTTTTACCGCCGCCGCAGTTGCAGTCTGTTGCTGAGACCAAAGATGAGACTATTCCTCAAGAGGTAGAACGAAAGACGGTTGTATTCCAAAAAGTGATGGACAAGCCTTCACAAGCGGAAGAACATCATCTCCAGAATATCACAAATTACCGTACTCATACTTCTGAATTTGACAAAAATGGGAAGCAAGAATCAAACAAAGGTGATGATGGGGATCGTGATGAGAAAGAAACTAGCAGCAAAAAGAAAGGAGCAACAATTGGAGGTAATAATAATTATAAAAGAACAGCATTTGATCACGATAACAACACAAGAGTTATAACAATGGCTGGTGAAAACAAAGGAGCTTTCATGGAAATAAATCTATCATCAGAAAAAAACAACAGCCGTCATCAACAGCAACAACAAATTCAAGACAACAACACTGTTGTTAGTGTTAAAGACAGTAACAAAAGTATAAACAAAACTAAGGGGATTAAGACTCGAAATGTTTTGCCTATGAGAGCCTTTTTTAACAGCAATGTTCAAGGGATAAACAATTCTATTCTTATGGACTCCAAATTTAGTCACCATGATCCTGGAATTCATCTTGTTTTTTCATCCCTCCCAACATCTCCTGATGACGAAGATGATCAACAACACCAATGA MASQLPRPWFRLGSMTRPTTAPNPEQSRPVPARVRPPIIRPAALTDPAEPTTPQRSKSPPPFSRPASLTPPVKSSPSPLRALPSPSTGQGGGTAMASPAVIPSSPKEKSSSVVGSPKGRSTSSVVGSPKGRSTSSVVGSPKTINSKQPSPFPSPSIPKSIPSVPTPYQSPKPKTFVSPPSPLVLPPPQLQSVAETKDETIPQEVERKTVVFQKVMDKPSQAEEHHLQNITNYRTHTSEFDKNGKQESNKGDDGDRDEKETSSKKKGATIGGNNNYKRTAFDHDNNTRVITMAGENKGAFMEINLSSEKNNSRHQQQQQIQDNNTVVSVKDSNKSINKTKGIKTRNVLPMRAFFNSNVQGINNSILMDSKFSHHDPGIHLVFSSLPTSPDDEDDQQHQ
BLAST of CsaV3_6G008950 vs. NCBI nr
Match: XP_004140616.2 (PREDICTED: probable serine/threonine-protein kinase samkC isoform X1 [Cucumis sativus] >KGN46543.1 hypothetical protein Csa_6G107920 [Cucumis sativus]) HSP 1 Score: 444.5 bits (1142), Expect = 3.8e-121 Identity = 380/397 (95.72%), Postives = 380/397 (95.72%), Query Frame = 0
BLAST of CsaV3_6G008950 vs. NCBI nr
Match: XP_008459746.1 (PREDICTED: zyxin isoform X1 [Cucumis melo]) HSP 1 Score: 380.6 bits (976), Expect = 6.7e-102 Identity = 312/398 (78.39%), Postives = 317/398 (79.65%), Query Frame = 0
BLAST of CsaV3_6G008950 vs. NCBI nr
Match: XP_008459747.1 (PREDICTED: zyxin isoform X2 [Cucumis melo]) HSP 1 Score: 373.2 bits (957), Expect = 1.1e-99 Identity = 305/398 (76.63%), Postives = 310/398 (77.89%), Query Frame = 0
BLAST of CsaV3_6G008950 vs. NCBI nr
Match: XP_011656858.1 (PREDICTED: probable serine/threonine-protein kinase samkC isoform X2 [Cucumis sativus]) HSP 1 Score: 366.7 bits (940), Expect = 1.0e-97 Identity = 336/397 (84.63%), Postives = 336/397 (84.63%), Query Frame = 0
BLAST of CsaV3_6G008950 vs. NCBI nr
Match: XP_023006599.1 (probable serine/threonine-protein kinase samkC isoform X2 [Cucurbita maxima]) HSP 1 Score: 205.3 bits (521), Expect = 3.9e-49 Identity = 190/406 (46.80%), Postives = 219/406 (53.94%), Query Frame = 0
BLAST of CsaV3_6G008950 vs. TAIR10
Match: AT2G46630.1 (unknown protein) HSP 1 Score: 67.0 bits (162), Expect = 3.0e-11 Identity = 50/117 (42.74%), Postives = 58/117 (49.57%), Query Frame = 0
BLAST of CsaV3_6G008950 vs. TAIR10
Match: AT1G75260.1 (oxidoreductases, acting on NADH or NADPH) HSP 1 Score: 50.4 bits (119), Expect = 2.9e-06 Identity = 31/99 (31.31%), Postives = 44/99 (44.44%), Query Frame = 0
BLAST of CsaV3_6G008950 vs. TAIR10
Match: AT1G63310.1 (unknown protein) HSP 1 Score: 45.4 bits (106), Expect = 9.3e-05 Identity = 30/102 (29.41%), Postives = 45/102 (44.12%), Query Frame = 0
BLAST of CsaV3_6G008950 vs. TrEMBL
Match: tr|A0A0A0KAP9|A0A0A0KAP9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107920 PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 2.5e-121 Identity = 380/397 (95.72%), Postives = 380/397 (95.72%), Query Frame = 0
BLAST of CsaV3_6G008950 vs. TrEMBL
Match: tr|A0A1S3CC40|A0A1S3CC40_CUCME (zyxin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498789 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 4.4e-102 Identity = 312/398 (78.39%), Postives = 317/398 (79.65%), Query Frame = 0
BLAST of CsaV3_6G008950 vs. TrEMBL
Match: tr|A0A1S3CAE9|A0A1S3CAE9_CUCME (zyxin isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498789 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 7.1e-100 Identity = 305/398 (76.63%), Postives = 310/398 (77.89%), Query Frame = 0
BLAST of CsaV3_6G008950 vs. TrEMBL
Match: tr|A0A2P4KRS4|A0A2P4KRS4_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_37649 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 7.0e-15 Identity = 69/203 (33.99%), Postives = 94/203 (46.31%), Query Frame = 0
BLAST of CsaV3_6G008950 vs. TrEMBL
Match: tr|A0A2P5YBS4|A0A2P5YBS4_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA07677 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.3e-13 Identity = 74/213 (34.74%), Postives = 99/213 (46.48%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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