Cp4.1LG12g04320 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g04320
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBnaA04g27120D protein
LocationCp4.1LG12 : 3384381 .. 3386561 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGCGGCTAGGTGTTTTGAAATGGAGTTGTGGTTCTTAAACTAACAGAGTTCGCTAAAAGGGAACGTTTTGGAATTCTTATTTTTTCAAAGAATATAATGTGTTTTTGTTGATTATTATTATTTTTTTTTTTTTTATTGTTCATTTGTCAACTTTGTGCTGTTCATTATTTCACCTATAAATAACTCCACACGCCTTAGTTCTTCATCATCGTCCATTATAATAATTTCATTGCTATTCTTAATTTAATGGCTGGTCAGCTCCCACGTCCATGGTTTCGTTTGGGTTCGTTGACTCGACCAACAACCGCCGCAACTACCGGTCCAGGGACGGACCAACCTCGCCCAATTCCAGCCCGGATTCGACCGCCCGTAATCCGGACCGCTTCCTTTACTGAACCGGCGGAACCCACTACCCCACAGCAATCAAAATCGCCACCGCAAACCCCGATGAAAAAGGCAGCATCGCCGCCTCAGTTGCCTCTCCCTGGCTCACTAACCCCTCCGGTGAAAAAGGCCGCATCGCCACCGGCTGCAGCGGTGACGAGACCTGCTCTTCCGTCGCCGGCGAAACATATTAGTCCGACGAAGAATGAGTTGGTTAATAAAGACAGTAGCAAACAGGCAAGTCCGGTTTCATCTCCTTTAGTTCCGAAGTCCATTCCGGCAGTTCCGACGCCATATCAGTCTCCGAAGCCGAAAGCTGCGGCGTCTCCGCCGTCACCACTGACTTTACCGCCGCCACAGTTGCAGTCAATTGATGAGCCTAAACATGAGAGTATTCCTCAAGAGGTAGTGTTAATTAAATTCACTTTTAATTTGATTGATTGCTATATTTTTAGTATTCCTTTATCATATAAATTAGTGAACTTTTAAAAGCTTTAATTAACGGTTAGTATTTGTCCACCTACTTCTTTATTCATTTTTCTTTTCTAAATTTCAAACATATTATAGAAAAATTGGATCTTTGATTTGTAAATTTTTTTTTTTTTTTTTGTACTAACCCATGAATCGAACTTTATATTTTTGAGTTACAATGTCGGGTTGTCTTTTTAATTATTTAAAAGAATTCTACTTATTTATAATACATTAATGATTAAAATTTTATAAAGCTCAAGTATCAAATATTTACGGTCATAATTGCATCATTAATATCAATTACAAATGTCGAATATTCTTAATCTTCGTAAAATAGTTGGGTTGGTCGAGTTGACTCGATAAAAAAAATGAAAAACTTTCGAACAAATTTGAATTTTCAAATTTCTAAAAATTCAATCAAACCCAAATCTTAAAAAAATTTAACTCACCCTAACATTTATGGTTTGATTTGAATAGTTGAGATTGATTGATTCATGGTCACTTCTAATAAAAAAAAGTTATACCTAACTTTTATGATTTGAGTTGAATAGTTGAGATTGATTGATTCATCGTCACTTCTAATAAAAAAAAGTTATTTAAAAAAAAAATTAAGACTACAAAACATAAAGATATTAAACTGTTCGAGGATTTCATAGGCCTCACGGGAGGCTCTATGTATGAGTTTTTTTTGGGAAGTCTAGAAGAAAACCATGAAAGCCTATACTCAAAGTAGACAATATCATACTATTGTGGAGAGTCGTGATTCCTAACATAAACAGGTATTTATCGTGTTTTACAGGTAGAACGGAAGACCGTTGTTTTCCAAAAGGCGATGGACAAGGCATCACAAGGTGAGCATGATATCACAAGCTACCATACTCACGGCGCTGAATTTGGCCAAAATGGGAAGCAAGAACCGAAAAAAAGCGATGAGGATGAAAGCAAAGACAAAGCAATTGGAGCTAAAAAAGCATTATTAGAGTCATCCAATGATAAAGACACAAACACAAACACGAGAGTTCTAACAATGGCAGGAAAAAACAATGGAGCTTCCATGGAAATATTCCTCTCAGACAAAAACAAAAACAAAAACGAAGACACGACCAACAACAATCTTAAAGACAACAAAAGTACAAAGAAAACATTGAGGACTCGCAATGGAGTGCCTATGAAAGCCTTTTTTAACAGCAATGTTCAAGGGATAAACAATTCCATTCTGATGGACTCCAAATTCACCCACCATGACCCTGGGATTCACCTTCTGTTTTCCCCCATGCCGCCGCCGCCATCTGCCGATGGTGAAGATGACAAGGGACACCAATGA

mRNA sequence

TATGCGGCTAGGTGTTTTGAAATGGAGTTGTGGTTCTTAAACTAACAGAGTTCGCTAAAAGGGAACGTTTTGGAATTCTTATTTTTTCAAAGAATATAATGTGTTTTTGTTGATTATTATTATTTTTTTTTTTTTTATTGTTCATTTGTCAACTTTGTGCTGTTCATTATTTCACCTATAAATAACTCCACACGCCTTAGTTCTTCATCATCGTCCATTATAATAATTTCATTGCTATTCTTAATTTAATGGCTGGTCAGCTCCCACGTCCATGGTTTCGTTTGGGTTCGTTGACTCGACCAACAACCGCCGCAACTACCGGTCCAGGGACGGACCAACCTCGCCCAATTCCAGCCCGGATTCGACCGCCCGTAATCCGGACCGCTTCCTTTACTGAACCGGCGGAACCCACTACCCCACAGCAATCAAAATCGCCACCGCAAACCCCGATGAAAAAGGCAGCATCGCCGCCTCAGTTGCCTCTCCCTGGCTCACTAACCCCTCCGGTGAAAAAGGCCGCATCGCCACCGGCTGCAGCGGTGACGAGACCTGCTCTTCCGTCGCCGGCGAAACATATTAGTCCGACGAAGAATGAGTTGGTTAATAAAGACAGTAGCAAACAGGCAAGTCCGGTTTCATCTCCTTTAGTTCCGAAGTCCATTCCGGCAGTTCCGACGCCATATCAGTCTCCGAAGCCGAAAGCTGCGGCGTCTCCGCCGTCACCACTGACTTTACCGCCGCCACAGTTGCAGTCAATTGATGAGCCTAAACATGAGAGTATTCCTCAAGAGGCGATGGACAAGGCATCACAAGGTGAGCATGATATCACAAGCTACCATACTCACGGCGCTGAATTTGGCCAAAATGGGAAGCAAGAACCGAAAAAAAGCGATGAGGATGAAAGCAAAGACAAAGCAATTGGAGCTAAAAAAGCATTATTAGAGTCATCCAATGATAAAGACACAAACACAAACACGAGAGTTCTAACAATGGCAGGAAAAAACAATGGAGCTTCCATGGAAATATTCCTCTCAGACAAAAACAAAAACAAAAACGAAGACACGACCAACAACAATCTTAAAGACAACAAAAGTACAAAGAAAACATTGAGGACTCGCAATGGAGTGCCTATGAAAGCCTTTTTTAACAGCAATGTTCAAGGGATAAACAATTCCATTCTGATGGACTCCAAATTCACCCACCATGACCCTGGGATTCACCTTCTGTTTTCCCCCATGCCGCCGCCGCCATCTGCCGATGGTGAAGATGACAAGGGACACCAATGA

Coding sequence (CDS)

ATGGCTGGTCAGCTCCCACGTCCATGGTTTCGTTTGGGTTCGTTGACTCGACCAACAACCGCCGCAACTACCGGTCCAGGGACGGACCAACCTCGCCCAATTCCAGCCCGGATTCGACCGCCCGTAATCCGGACCGCTTCCTTTACTGAACCGGCGGAACCCACTACCCCACAGCAATCAAAATCGCCACCGCAAACCCCGATGAAAAAGGCAGCATCGCCGCCTCAGTTGCCTCTCCCTGGCTCACTAACCCCTCCGGTGAAAAAGGCCGCATCGCCACCGGCTGCAGCGGTGACGAGACCTGCTCTTCCGTCGCCGGCGAAACATATTAGTCCGACGAAGAATGAGTTGGTTAATAAAGACAGTAGCAAACAGGCAAGTCCGGTTTCATCTCCTTTAGTTCCGAAGTCCATTCCGGCAGTTCCGACGCCATATCAGTCTCCGAAGCCGAAAGCTGCGGCGTCTCCGCCGTCACCACTGACTTTACCGCCGCCACAGTTGCAGTCAATTGATGAGCCTAAACATGAGAGTATTCCTCAAGAGGCGATGGACAAGGCATCACAAGGTGAGCATGATATCACAAGCTACCATACTCACGGCGCTGAATTTGGCCAAAATGGGAAGCAAGAACCGAAAAAAAGCGATGAGGATGAAAGCAAAGACAAAGCAATTGGAGCTAAAAAAGCATTATTAGAGTCATCCAATGATAAAGACACAAACACAAACACGAGAGTTCTAACAATGGCAGGAAAAAACAATGGAGCTTCCATGGAAATATTCCTCTCAGACAAAAACAAAAACAAAAACGAAGACACGACCAACAACAATCTTAAAGACAACAAAAGTACAAAGAAAACATTGAGGACTCGCAATGGAGTGCCTATGAAAGCCTTTTTTAACAGCAATGTTCAAGGGATAAACAATTCCATTCTGATGGACTCCAAATTCACCCACCATGACCCTGGGATTCACCTTCTGTTTTCCCCCATGCCGCCGCCGCCATCTGCCGATGGTGAAGATGACAAGGGACACCAATGA

Protein sequence

MAGQLPRPWFRLGSLTRPTTAATTGPGTDQPRPIPARIRPPVIRTASFTEPAEPTTPQQSKSPPQTPMKKAASPPQLPLPGSLTPPVKKAASPPAAAVTRPALPSPAKHISPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAASPPSPLTLPPPQLQSIDEPKHESIPQEAMDKASQGEHDITSYHTHGAEFGQNGKQEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVLTMAGKNNGASMEIFLSDKNKNKNEDTTNNNLKDNKSTKKTLRTRNGVPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLLFSPMPPPPSADGEDDKGHQ
Homology
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BLAST of Cp4.1LG12g04320 vs. TrEMBL
Match: A0A0A0KAP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107920 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 7.2e-71
Identity = 198/391 (50.64%), Postives = 246/391 (62.92%), Query Frame = 1 

Query: 1   MAGQLPRPWFRLGSLTRPTTAATTGPGTDQPRPIPARIRPPVIRTASFTEPAEPTTPQQS 60
           MA QLPRPWFRLGS+TRPTTA    P  +Q RP+PAR+RPP+IR A+ T+PAEPTTPQ+S
Sbjct: 1   MASQLPRPWFRLGSMTRPTTA----PNPEQSRPVPARVRPPIIRPAALTDPAEPTTPQRS 60

Query: 61  KSP-------PQTPMKKAASPPQLPLPGSLTPPVKKAA-SPPAAAVTRPALPSPAKHISP 120
           KSP         TP  K++  P   LP   T      A + PA   + P   S +   SP
Sbjct: 61  KSPPPFSRPASLTPPVKSSPSPLRALPSPSTGQGGGTAMASPAVIPSSPKEKSSSVVGSP 120

Query: 121 ---TKNELVNKD---SSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAASPPSPLTLPPPQ 180
              + + +V      +SKQ SP  SP +PKSIP+VPTPYQSPKPK   SPPSPL LPPPQ
Sbjct: 121 KGRSTSSVVGSPKTINSKQPSPFPSPSIPKSIPSVPTPYQSPKPKTFVSPPSPLVLPPPQ 180

Query: 181 LQSIDEPKHESIPQE----------AMDKASQGE----HDITSYHTHGAEFGQNGKQEPK 240
           LQS+ E K E+IPQE           MDK SQ E     +IT+Y TH +EF +NGKQE  
Sbjct: 181 LQSVAETKDETIPQEVERKTVVFQKVMDKPSQAEEHHLQNITNYRTHTSEFDKNGKQESN 240

Query: 241 KSDEDESKDKAIGAKK--ALLESSNDK-----DTNTNTRVLTMAGKNNGASMEIFLSDKN 300
           K D+ +  +K   +KK  A +  +N+      D + NTRV+TMAG+N GA MEI LS + 
Sbjct: 241 KGDDGDRDEKETSSKKKGATIGGNNNYKRTAFDHDNNTRVITMAGENKGAFMEINLSSEK 300

Query: 301 KNK--------NEDTTNNNLKD-NKSTKKT--LRTRNGVPMKAFFNSNVQGINNSILMDS 346
            N          ++ T  ++KD NKS  KT  ++TRN +PM+AFFNSNVQGINNSILMDS
Sbjct: 301 NNSRHQQQQQIQDNNTVVSVKDSNKSINKTKGIKTRNVLPMRAFFNSNVQGINNSILMDS 360

[Close]
BLAST of Cp4.1LG12g04320 vs. TrEMBL
Match: V4LHP3_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10001731mg PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.7e-17
Identity = 119/377 (31.56%), Postives = 169/377 (44.83%), Query Frame = 1 

Query: 7   RPWFRLGSLTRPTTAATTGPGTD-QPRPIPAR---IRPPVIRTA--------SFTEPAEP 66
           RPWFRL S+ RPT+  ++ P    QPRP P R   +RPPV + +        S     +P
Sbjct: 5   RPWFRLSSIARPTSQGSSDPPPPPQPRPTPRRQVTVRPPVKQPSPPRQQQPPSPPRQQQP 64

Query: 67  TTPQQSKSPPQTPMKKAASPPQLPLPGSLTPPVKKAASPPAAAVTRPALPSPAKHISPTK 126
            +P + + PP  P  +   PPQ   P   +PP +  + P       P+ P P     P +
Sbjct: 65  PSPPRQQQPPSPPRHQTPPPPQERSPYH-SPPSRHMSPPTPPKAASPSPPPP----QPPR 124

Query: 127 NELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPK------PKAAASPP--SPLTLPPPQ 186
           +  +   S K+      P  P S P+     +S K      P+ AASP   SP +LPP Q
Sbjct: 125 SSYMPPPSPKEVQEALPPRKPTSPPSPAHSTRSMKSESSESPRKAASPRVLSPYSLPPSQ 184

Query: 187 LQSIDEPKHESIPQEAMDKASQ----GEHDITSY-HTHGAEFGQNGK-QEPKKSDEDESK 246
           L S  E   + I     +K SQ      H+  +Y H H      N +    KK+   +S 
Sbjct: 185 LHSERETTQKIIL--TAEKTSQLYEPNHHENQNYNHNHNQNQNHNHQGNNTKKTHHQQS- 244

Query: 247 DKAIGAKKALLESSNDKDTNTNTRVLTMAGKNNGASMEIFLSDKNK-------------- 306
                       S +D +    TRV+T+AG+N GA MEI  S  N               
Sbjct: 245 ------------SFSDSENIMGTRVITIAGENKGAVMEILRSPSNNKTGGTGPHSSRVLN 304

Query: 307 ------NKNEDTTNNNLKDNKSTKKTLRTRN------GVPMKAFFNSNVQGINNSILMDS 332
                  + + +++++  + +  KKT + RN       +PMKAF NSNVQ INNSI+ +S
Sbjct: 305 GAGEKGRRLQSSSSSSSDEGEGKKKTTKNRNNTSNNSNLPMKAFMNSNVQMINNSIVYNS 361

[Close]
BLAST of Cp4.1LG12g04320 vs. TrEMBL
Match: D7LF69_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_904132 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 9.6e-15
Identity = 111/394 (28.17%), Postives = 167/394 (42.39%), Query Frame = 1 

Query: 7   RPWFRLGSLTRPTTAATTGPGTDQPRPIPAR---IRPPVIRTAS---------------- 66
           RPWFRL S+ RPT+  ++ P   QPRP P R   +RPP  + +                 
Sbjct: 5   RPWFRLSSIARPTSQGSSEPPPPQPRPTPRRTVVVRPPAKQPSPPRQRQPPSPPRQQQPP 64

Query: 67  ---------FTEPAE---PTTPQQSKSPPQTPMKKAASPPQLPLPGSLTPPVKKAASPPA 126
                     T P +   PT+P Q +SP  +P  +  SPP  P   +  PP      PP 
Sbjct: 65  SPPRQQQQPLTPPRQQQQPTSPPQERSPYHSPPSRHMSPPTPPKAATPPPP------PPR 124

Query: 127 AAVTRPALPSPAKH-ISPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAA 186
           ++ T P  P   +  + P K       +    S  S  +  +S        ++P P+   
Sbjct: 125 SSYTPPPSPKEVQEALPPRKPNSPRSPAHSSRSTSSESVKTRSASESENHRKAPSPRVL- 184

Query: 187 SPPSPLTLPPPQLQSIDEPKHESIPQEAMDKASQGEHDITSYHTHGAEFGQNGKQEPKKS 246
              SP +LPP QL S  E   ++I     +K SQ      S+H     + QN       +
Sbjct: 185 ---SPYSLPPSQLHSERETTQKNIL--TAEKTSQTHEP--SHHNQNHNYNQNHNYNQNHN 244

Query: 247 DEDESKDKAIGAKKALLESSNDKDTNTNTRVLTMAGKNNGASMEIFLSDKNKNKN----- 306
            +  +  K          S++D +   +TRV+T+AG+N GA MEI  S +          
Sbjct: 245 HQGNNPKKMHRQP-----STSDSENIMSTRVITIAGENKGAVMEILRSPQGNKTGGSGTH 304

Query: 307 ---------------EDTTNNNLKDNKSTKKTLRTRNG----VPMKAFFNSNVQGINNSI 345
                          + +++++  + +  KKT +  N     +PMKAF NSNVQ INNSI
Sbjct: 305 SSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKTTKNPNNGNSNLPMKAFMNSNVQMINNSI 364

[Close]
BLAST of Cp4.1LG12g04320 vs. TrEMBL
Match: A0A059CJ89_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02643 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.8e-14
Identity = 128/410 (31.22%), Postives = 168/410 (40.98%), Query Frame = 1 

Query: 1   MAGQLP--RPWFRLGSLTRPTTA----ATTGPGTDQPRPIPARIRPPVIRTASFTE---- 60
           MA Q P  RPW R+ S+ RP       A   P    P P PA    P I   +F      
Sbjct: 1   MASQPPPSRPWLRMTSIARPVAPPPPPAPQPPPQAPPPPAPAPQPRPTISLPTFRPSAPP 60

Query: 61  -----------PAEPTTPQQSKSPPQTPMKKA--------ASPPQLPL--PGSLTPPVKK 120
                      P+EP TP +    P   +K          ASP +LP   P   +PP K 
Sbjct: 61  PPPPRPRPPSLPSEPRTPPRQPVQPPPDVKTIVAPTSPLPASPAKLPSAPPAVTSPPAKA 120

Query: 121 AASPPAAAVTRPALPSPAKHISPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPK 180
              PPAA    P+ P PA    P             A PV  P +    P   TP QSP 
Sbjct: 121 QLPPPAARSPVPSPPKPATSEPPI------------AMPVPVPSLKVVKPGAQTPPQSPS 180

Query: 181 PKAAASPPSPLTLPPPQLQSIDEPKHES-------IPQEAMDKASQGEH-DITSYHTHGA 240
            K  A PPSPL LPPPQL++ D+P+          + QE +            +      
Sbjct: 181 MKPVAPPPSPLVLPPPQLRADDQPRFPPEAEQKTVLVQETVPVPPPSSRLPSLNGRFPSD 240

Query: 241 EFGQNGKQEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVLTMAGKNNGASMEIFL 300
           E  + G     K+ + E + +    KK L     D       +V+T+AG+N GA+ME+  
Sbjct: 241 EIPKAGIARDTKNGDAE-RHRGPHPKKHL-----DSGEVPGMKVITIAGENKGATMELTR 300

Query: 301 SDKN------------KNKNEDTTNNNLK---------DNKSTKKTLRTR----NGVPMK 346
           S K+            K+  +++ N+ L          D K  KK    +       PM 
Sbjct: 301 SPKHPPPHHLKASPTSKSNGQESRNSTLPGSSSSSDEGDGKMKKKDKSHQWKFFTSPPMS 360

[Close]
BLAST of Cp4.1LG12g04320 vs. TrEMBL
Match: B9T512_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0144270 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.8e-14
Identity = 114/380 (30.00%), Postives = 171/380 (45.00%), Query Frame = 1 

Query: 5   LPRPWFRLGSLTRPTTAATTGPGTDQPR---PIPARIRPPVIR-TASFTEPAEPTTPQQS 64
           LP+   +  +   P T +++   + +PR   P  +    PV++ T +F+ P  P T    
Sbjct: 119 LPKSPVQTATAVGPVTTSSSVQSSPRPRVSAPTSSLPSSPVLKPTQTFSVPTSPAT---- 178

Query: 65  KSPPQTPMKKAASPPQLPLPGSLTPPVKKAASPPAAAVTRPA--LPSPAKHISPTKNELV 124
             P  T +    SP   P+P +++ P   A  P    ++ P   LP PA   S       
Sbjct: 179 -KPMPTTVSLPTSPATKPMPTTVSVPTSPATKPMPTTISVPTSPLPKPAPATSSVPTSPA 238

Query: 125 NKDSSKQASPVSSPLVPKSI-------PAVPTPYQSPKPKAAASPPSPLTLPPPQLQSID 184
           N+  S   +  S+  VP  +       P V +P +SPK    A PPSPL LPP +++S D
Sbjct: 239 NRAVSTTTTATSTARVPSPVQYPRTINPVVQSPPRSPKLNPTAPPPSPLILPPAKIKS-D 298

Query: 185 EPKHESIP----------QEAMDK-----ASQGEHDITSYHTHGAEFGQNGKQEPKKSDE 244
                 IP          Q+ +DK      + G  +    +   +  G NGKQE  K D 
Sbjct: 299 AETEAKIPLVAEQKTVVVQKTIDKPKPWLTNGGNSERDLVNAVKSSIGLNGKQETTK-DH 358

Query: 245 DESKDKAIGAKKALLESSNDKDTNTNTRVLTMAGKNNGASMEIFLSDKNKN--------- 304
            E+K+K +   K +   S D       RV+T+AG+N GA ME+  S   K+         
Sbjct: 359 GETKEKVL--HKKIFSGSED----GGMRVITVAGENKGAFMEVIRSPNKKHVFEGSPHHL 418

Query: 305 --KNEDTTNNNLK-----DNKST-----KKTLRTRNG-------VPMKAFFNSNVQGINN 329
             K+ D  ++ +K      N S+     K  ++ +N        +PM AF NSNVQG+NN
Sbjct: 419 HKKDNDPKSDGIKWISYSSNGSSSEGEGKPKMKDKNHKGKGMNSLPMTAFMNSNVQGVNN 478

[Close]
BLAST of Cp4.1LG12g04320 vs. TAIR10
Match: AT2G46630.1 (AT2G46630.1 unknown protein)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-16
Identity = 114/397 (28.72%), Postives = 164/397 (41.31%), Query Frame = 1 

Query: 7   RPWFRLGSLTRPTTAATTGPGTDQPRPI---------------PARIR------------ 66
           RPWFRL S+ RPT   ++ P   QPRP                P R R            
Sbjct: 5   RPWFRLSSIARPTAQGSSDPPPPQPRPTSRSSLVVRPPAKQPSPPRQRQPRSPPRQQDPP 64

Query: 67  -PPVIRTASFTEP---AEPTTPQQSKSPPQTPMKKAASPPQLPLPGSLTPPVKKAASPPA 126
            PP  +    T P   A PT+P Q +SP  +P  +  SPP  P   +  PP      PP 
Sbjct: 65  SPPRQQQQPLTPPRQKAPPTSPPQERSPYHSPPSRHMSPPTPPKAATPPPP------PPR 124

Query: 127 AAVTRPALPSPAKHISPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAAS 186
           ++ T P  P   +   P +     K +S  +   SS           +P +S   + A S
Sbjct: 125 SSYTSPPSPKEVQEALPPR-----KPNSPPSPAHSSRSTTSESVKTRSPSESENHRKAPS 184

Query: 187 PP--SPLTLPPPQLQSIDEPKHESIPQEAMDKASQGEHDITSYHTHGAEFGQNGKQEPKK 246
           P   SP +LP   L S  E   ++I     +K SQ          H  ++ QN       
Sbjct: 185 PRVLSPYSLPASLLHSERETTQKNIL--TAEKTSQTHETNHHNQNHNHDYNQNHNYNQNH 244

Query: 247 SDEDESKDKAIGAKKALLE-SSNDKDTNTNTRVLTMAGKNNGASMEIFLSDKNKNKN--- 306
           S       +    KK   + SS+D +   +TRV+T+AG+N GA MEI  S +        
Sbjct: 245 SYNQNQNHQGNNPKKMHRQPSSSDSENIMSTRVITIAGENKGAVMEILRSPQGNKTGGSG 304

Query: 307 -----------------EDTTNNNLKDNKSTKKTLRT-----RNGVPMKAFFNSNVQGIN 345
                            + +++++  + +  KKT +       + +PMKAF NSNVQ IN
Sbjct: 305 THSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKTTKNVPNKGNSNLPMKAFMNSNVQMIN 364

[Close]
BLAST of Cp4.1LG12g04320 vs. NCBI nr
Match: gi|778712181|ref|XP_011656858.1| (PREDICTED: probable serine/threonine-protein kinase samkC isoform X2 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 6.3e-76
Identity = 203/390 (52.05%), Postives = 248/390 (63.59%), Query Frame = 1 

Query: 1   MAGQLPRPWFRLGSLTRPTTAATTGPGTDQPRPIPARIRPPVIRTASFTEPAEPTTPQQS 60
           MA QLPRPWFRLGS+TRPTTA    P  +Q RP+PAR+RPP+IR A+ T+PAEPTTPQ+S
Sbjct: 1   MASQLPRPWFRLGSMTRPTTA----PNPEQSRPVPARVRPPIIRPAALTDPAEPTTPQRS 60

Query: 61  KSPPQTPMKKAASPPQLPLPGSLTPPVKKAASPPAA------------AVTRPA-LPSPA 120
           KSPP  P  +         P SLTPPVK + SP  A            A+  PA +PS  
Sbjct: 61  KSPP--PFSR---------PASLTPPVKSSPSPLRALPSPSTGQGGGTAMASPAVIPSSP 120

Query: 121 KHISPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAASPPSPLTLPPPQL 180
           K  S +        +SKQ SP  SP +PKSIP+VPTPYQSPKPK   SPPSPL LPPPQL
Sbjct: 121 KEKSSSVVGSPKTINSKQPSPFPSPSIPKSIPSVPTPYQSPKPKTFVSPPSPLVLPPPQL 180

Query: 181 QSIDEPKHESIPQE----------AMDKASQGE----HDITSYHTHGAEFGQNGKQEPKK 240
           QS+ E K E+IPQE           MDK SQ E     +IT+Y TH +EF +NGKQE  K
Sbjct: 181 QSVAETKDETIPQEVERKTVVFQKVMDKPSQAEEHHLQNITNYRTHTSEFDKNGKQESNK 240

Query: 241 SDEDESKDKAIGAKK--ALLESSNDK-----DTNTNTRVLTMAGKNNGASMEIFLSDKNK 300
            D+ +  +K   +KK  A +  +N+      D + NTRV+TMAG+N GA MEI LS +  
Sbjct: 241 GDDGDRDEKETSSKKKGATIGGNNNYKRTAFDHDNNTRVITMAGENKGAFMEINLSSEKN 300

Query: 301 NK--------NEDTTNNNLKD-NKSTKKT--LRTRNGVPMKAFFNSNVQGINNSILMDSK 346
           N          ++ T  ++KD NKS  KT  ++TRN +PM+AFFNSNVQGINNSILMDSK
Sbjct: 301 NSRHQQQQQIQDNNTVVSVKDSNKSINKTKGIKTRNVLPMRAFFNSNVQGINNSILMDSK 360

[Close]
BLAST of Cp4.1LG12g04320 vs. NCBI nr
Match: gi|659119611|ref|XP_008459747.1| (PREDICTED: zyxin isoform X2 [Cucumis melo])

HSP 1 Score: 290.0 bits (741), Expect = 5.3e-75
Identity = 199/390 (51.03%), Postives = 244/390 (62.56%), Query Frame = 1 

Query: 1   MAGQLPRPWFRLGSLTRPTTAATTGPGTDQPRPIPARIRPPVIRTASFTEPAEPTTPQQS 60
           MA QLPRPWFRLGS+TRPTT     P  +QPRP+PAR+RPP+IR A+ T+PAEPTTPQ+S
Sbjct: 1   MASQLPRPWFRLGSMTRPTTT----PNPEQPRPVPARVRPPIIRPAALTDPAEPTTPQRS 60

Query: 61  KSPPQTPMKKAASPPQLPLPGSLTPPVKKAASP------PAA------AVTRPAL-PSPA 120
           KSPP            LP P +LTPPVK +ASP      P++      A+  PA+ P+  
Sbjct: 61  KSPPP-----------LPRPVTLTPPVKNSASPLRVLPSPSSGQGGGTAMASPAVNPNSP 120

Query: 121 KHISPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAASPPSPLTLPPPQL 180
           K  S +        +SKQ SP  SP +PKSIP+VPTPYQSPKPK   SPPSPL LPPPQL
Sbjct: 121 KEKSSSVVGSPKTINSKQPSPFPSPSIPKSIPSVPTPYQSPKPKTVVSPPSPLVLPPPQL 180

Query: 181 QSIDEPKHESIPQE----------AMDKASQGEH----DITSYHTH-GAEFGQNGKQEPK 240
           QS+ E KHE+IPQE           MDK SQ E     +IT+Y TH    F +NGKQE  
Sbjct: 181 QSVAETKHETIPQEVERKTVVFQKVMDKPSQEEEHHHLNITNYRTHTSGLFDKNGKQESN 240

Query: 241 KSDEDESKDKAIGAKKALLESSNDK------DTNTNTRVLTMAGKNNGASMEIFL-SDKN 300
           K D+ +  +  +   K  +   N        D + + RV+TMAG+N GA MEI L SDKN
Sbjct: 241 KGDDGDHVENGVSKNKGTIFGGNSNFKRTAFDHDNHARVITMAGENKGAFMEINLSSDKN 300

Query: 301 KNKNEDTTNN-------NLKDNKSTK---KTLRTRNGVPMKAFFNSNVQGINNSILMDSK 346
            ++++    N       +LKDN  +K   K   TRN +PM+AFFNSNVQGINNSILMDSK
Sbjct: 301 NSRHQQQQQNQDNNTVVDLKDNNKSKNKTKGSNTRNVLPMRAFFNSNVQGINNSILMDSK 360

[Close]
BLAST of Cp4.1LG12g04320 vs. NCBI nr
Match: gi|659119609|ref|XP_008459746.1| (PREDICTED: uncharacterized protein DDB_G0284459 isoform X1 [Cucumis melo])

HSP 1 Score: 281.2 bits (718), Expect = 2.5e-72
Identity = 196/402 (48.76%), Postives = 241/402 (59.95%), Query Frame = 1 

Query: 1   MAGQLPRPWFRLGSLTRPTTAATTGPGTDQPRPIPARIRPPVIRTASFTEPAEPTTPQQS 60
           MA QLPRPWFRLGS+TRPTT     P  +QPRP+PAR+RPP+IR A+ T+PAEPTTPQ+S
Sbjct: 1   MASQLPRPWFRLGSMTRPTTT----PNPEQPRPVPARVRPPIIRPAALTDPAEPTTPQRS 60

Query: 61  KSPPQTPMKKAASPPQLPLPGSLTPPVKKA-------ASPPAAAVTRPALPSPAKHISPT 120
           KSPP            LP P +LTPPVK +        SP +      A+ SPA + +  
Sbjct: 61  KSPPP-----------LPRPVTLTPPVKNSASPLRVLPSPSSGQGGGTAMASPAVNPNSP 120

Query: 121 KNELVN------------------KDSSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAAS 180
           K +  +                    +SKQ SP  SP +PKSIP+VPTPYQSPKPK   S
Sbjct: 121 KEKSSSVVGSPKGRSNSSVVGSPKTINSKQPSPFPSPSIPKSIPSVPTPYQSPKPKTVVS 180

Query: 181 PPSPLTLPPPQLQSIDEPKHESIPQE----------AMDKASQGEH----DITSYHTH-G 240
           PPSPL LPPPQLQS+ E KHE+IPQE           MDK SQ E     +IT+Y TH  
Sbjct: 181 PPSPLVLPPPQLQSVAETKHETIPQEVERKTVVFQKVMDKPSQEEEHHHLNITNYRTHTS 240

Query: 241 AEFGQNGKQEPKKSDEDESKDKAIGAKKALLESSNDK------DTNTNTRVLTMAGKNNG 300
             F +NGKQE  K D+ +  +  +   K  +   N        D + + RV+TMAG+N G
Sbjct: 241 GLFDKNGKQESNKGDDGDHVENGVSKNKGTIFGGNSNFKRTAFDHDNHARVITMAGENKG 300

Query: 301 ASMEIFL-SDKNKNKNEDTTNN-------NLKDNKSTK---KTLRTRNGVPMKAFFNSNV 346
           A MEI L SDKN ++++    N       +LKDN  +K   K   TRN +PM+AFFNSNV
Sbjct: 301 AFMEINLSSDKNNSRHQQQQQNQDNNTVVDLKDNNKSKNKTKGSNTRNVLPMRAFFNSNV 360

[Close]
BLAST of Cp4.1LG12g04320 vs. NCBI nr
Match: gi|778712178|ref|XP_004140616.2| (PREDICTED: probable serine/threonine-protein kinase samkC isoform X1 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 1.0e-70
Identity = 198/391 (50.64%), Postives = 246/391 (62.92%), Query Frame = 1 

Query: 1   MAGQLPRPWFRLGSLTRPTTAATTGPGTDQPRPIPARIRPPVIRTASFTEPAEPTTPQQS 60
           MA QLPRPWFRLGS+TRPTTA    P  +Q RP+PAR+RPP+IR A+ T+PAEPTTPQ+S
Sbjct: 1   MASQLPRPWFRLGSMTRPTTA----PNPEQSRPVPARVRPPIIRPAALTDPAEPTTPQRS 60

Query: 61  KSP-------PQTPMKKAASPPQLPLPGSLTPPVKKAA-SPPAAAVTRPALPSPAKHISP 120
           KSP         TP  K++  P   LP   T      A + PA   + P   S +   SP
Sbjct: 61  KSPPPFSRPASLTPPVKSSPSPLRALPSPSTGQGGGTAMASPAVIPSSPKEKSSSVVGSP 120

Query: 121 ---TKNELVNKD---SSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAASPPSPLTLPPPQ 180
              + + +V      +SKQ SP  SP +PKSIP+VPTPYQSPKPK   SPPSPL LPPPQ
Sbjct: 121 KGRSTSSVVGSPKTINSKQPSPFPSPSIPKSIPSVPTPYQSPKPKTFVSPPSPLVLPPPQ 180

Query: 181 LQSIDEPKHESIPQE----------AMDKASQGE----HDITSYHTHGAEFGQNGKQEPK 240
           LQS+ E K E+IPQE           MDK SQ E     +IT+Y TH +EF +NGKQE  
Sbjct: 181 LQSVAETKDETIPQEVERKTVVFQKVMDKPSQAEEHHLQNITNYRTHTSEFDKNGKQESN 240

Query: 241 KSDEDESKDKAIGAKK--ALLESSNDK-----DTNTNTRVLTMAGKNNGASMEIFLSDKN 300
           K D+ +  +K   +KK  A +  +N+      D + NTRV+TMAG+N GA MEI LS + 
Sbjct: 241 KGDDGDRDEKETSSKKKGATIGGNNNYKRTAFDHDNNTRVITMAGENKGAFMEINLSSEK 300

Query: 301 KNK--------NEDTTNNNLKD-NKSTKKT--LRTRNGVPMKAFFNSNVQGINNSILMDS 346
            N          ++ T  ++KD NKS  KT  ++TRN +PM+AFFNSNVQGINNSILMDS
Sbjct: 301 NNSRHQQQQQIQDNNTVVSVKDSNKSINKTKGIKTRNVLPMRAFFNSNVQGINNSILMDS 360

[Close]
BLAST of Cp4.1LG12g04320 vs. NCBI nr
Match: gi|567166549|ref|XP_006397855.1| (hypothetical protein EUTSA_v10001731mg [Eutrema salsugineum])

HSP 1 Score: 97.8 bits (242), Expect = 3.9e-17
Identity = 119/377 (31.56%), Postives = 169/377 (44.83%), Query Frame = 1 

Query: 7   RPWFRLGSLTRPTTAATTGPGTD-QPRPIPAR---IRPPVIRTA--------SFTEPAEP 66
           RPWFRL S+ RPT+  ++ P    QPRP P R   +RPPV + +        S     +P
Sbjct: 5   RPWFRLSSIARPTSQGSSDPPPPPQPRPTPRRQVTVRPPVKQPSPPRQQQPPSPPRQQQP 64

Query: 67  TTPQQSKSPPQTPMKKAASPPQLPLPGSLTPPVKKAASPPAAAVTRPALPSPAKHISPTK 126
            +P + + PP  P  +   PPQ   P   +PP +  + P       P+ P P     P +
Sbjct: 65  PSPPRQQQPPSPPRHQTPPPPQERSPYH-SPPSRHMSPPTPPKAASPSPPPP----QPPR 124

Query: 127 NELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPK------PKAAASPP--SPLTLPPPQ 186
           +  +   S K+      P  P S P+     +S K      P+ AASP   SP +LPP Q
Sbjct: 125 SSYMPPPSPKEVQEALPPRKPTSPPSPAHSTRSMKSESSESPRKAASPRVLSPYSLPPSQ 184

Query: 187 LQSIDEPKHESIPQEAMDKASQ----GEHDITSY-HTHGAEFGQNGK-QEPKKSDEDESK 246
           L S  E   + I     +K SQ      H+  +Y H H      N +    KK+   +S 
Sbjct: 185 LHSERETTQKIIL--TAEKTSQLYEPNHHENQNYNHNHNQNQNHNHQGNNTKKTHHQQS- 244

Query: 247 DKAIGAKKALLESSNDKDTNTNTRVLTMAGKNNGASMEIFLSDKNK-------------- 306
                       S +D +    TRV+T+AG+N GA MEI  S  N               
Sbjct: 245 ------------SFSDSENIMGTRVITIAGENKGAVMEILRSPSNNKTGGTGPHSSRVLN 304

Query: 307 ------NKNEDTTNNNLKDNKSTKKTLRTRN------GVPMKAFFNSNVQGINNSILMDS 332
                  + + +++++  + +  KKT + RN       +PMKAF NSNVQ INNSI+ +S
Sbjct: 305 GAGEKGRRLQSSSSSSSDEGEGKKKTTKNRNNTSNNSNLPMKAFMNSNVQMINNSIVYNS 361

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g04320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g04320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAP9_CUCSA7.2e-7150.64Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107920 PE=4 SV=1[more]
V4LHP3_EUTSA2.7e-1731.56Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10001731mg PE=4 SV=1[more]
D7LF69_ARALL9.6e-1528.17Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA... [more]
A0A059CJ89_EUCGR2.8e-1431.22Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02643 PE=4 SV=1[more]
B9T512_RICCO2.8e-1430.00Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0144270 PE=4 SV=1[more]
BLAST of Cp4.1LG12g04320 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46630.11.2e-1628.72 unknown protein[more]
BLAST of Cp4.1LG12g04320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778712181|ref|XP_011656858.1|6.3e-7652.05PREDICTED: probable serine/threonine-protein kinase samkC isoform X2 [Cucumis sa... [more]
gi|659119611|ref|XP_008459747.1|5.3e-7551.03PREDICTED: zyxin isoform X2 [Cucumis melo][more]
gi|659119609|ref|XP_008459746.1|2.5e-7248.76PREDICTED: uncharacterized protein DDB_G0284459 isoform X1 [Cucumis melo][more]
gi|778712178|ref|XP_004140616.2|1.0e-7050.64PREDICTED: probable serine/threonine-protein kinase samkC isoform X1 [Cucumis sa... [more]
gi|567166549|ref|XP_006397855.1|3.9e-1731.56hypothetical protein EUTSA_v10001731mg [Eutrema salsugineum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g04320.1Cp4.1LG12g04320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33472FAMILY NOT NAMEDcoord: 29..328
score: 2.5
NoneNo IPR availablePANTHERPTHR33472:SF1EXTENSIN-RELATEDcoord: 29..328
score: 2.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g04320Cucsa.120820Cucumber (Gy14) v1cgycpeB0286
Cp4.1LG12g04320CmaCh17G005030Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g04320CmoCh17G004750Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g04320Cla006690Watermelon (97103) v1cpewmB155
Cp4.1LG12g04320Csa6G107920Cucumber (Chinese Long) v2cpecuB152
Cp4.1LG12g04320MELO3C022249Melon (DHL92) v3.5.1cpemeB112
Cp4.1LG12g04320ClCG06G002780Watermelon (Charleston Gray)cpewcgB144
Cp4.1LG12g04320CSPI06G08570Wild cucumber (PI 183967)cpecpiB154
Cp4.1LG12g04320Lsi09G016540Bottle gourd (USVL1VR-Ls)cpelsiB105
Cp4.1LG12g04320MELO3C022249.2Melon (DHL92) v3.6.1cpemedB138
Cp4.1LG12g04320CsaV3_6G008950Cucumber (Chinese Long) v3cpecucB0176
Cp4.1LG12g04320Bhi12G001940Wax gourdcpewgoB0174
Cp4.1LG12g04320Carg26676Silver-seed gourdcarcpeB1250
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g04320Bottle gourd (USVL1VR-Ls)cpelsiB101
Cp4.1LG12g04320Cucumber (Gy14) v2cgybcpeB732