Carg26676 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26676
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	vegetative cell wall protein gp1
Location	Cucurbita_argyrosperma_scaffold_268 : 233904 .. 235920 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGTCAGCTCCCACGTCCATGGTTCCGTTTGGGTTCGTTGACTCGACCAACAACCGGCGCAACTACCGGTTCAGGGACGGACCAACCGCGCCCGGTTCCAGCCCGGATTCGACCGCCCGTAATCCGGACCGCCTCCTTTACTGAACCGGCAGAACCCACTACCCCACAGCCATCAAAATCGCCACCGCAAACCCCGATGAAAAAGGCAGCATCGCCGCCTCAGTTGCCTCTCCCTGGCTCACTAACCCCTCCGGTGAAAAAGCCCGCATCGCCACCGGCTGCAGCGGTGACCAGACCTGCTCTTCCGTCGCCGGCGAAACATATTAGCCCGAAGGGGAAAAGTGGTTCAGTTGTAGGGTCTCCGACGAAGAATGAGTTGGTTAATAAGGACAGTAGCAAACAGGCAAGTCCGGTTTCATCTCCTTTAGTTCCGAAGTCCATTCCGGCAGTTCCGACGCCATATCAGTCTCCGAAGCCGAAAGCTGCGGCGTCTCCGCCGTCACCACTGACTTTACCGCCGCCACAGTTGCAGTCAGTTGATGAGCCTAAACATGAGAGTATTCCTCAAGAGGTAGTGTTAATTAATTTCACTTTTAATTTGATTGATTGCTATATTTTTAATATTCCTTTATCATACAAATCAGTGAACTTTTAAATGCTTTAATTAAAGGTTAGTATTTGTCCACTTACTTCTTTATTCATTTTTCTTTTCTAAATTTCAAACATATTTATTTTACGCTTAAAGTTATGTAAAAAAATTGGATCTTTGATTCGTAATTTTTTTTTTTTTATCAACTTCAAAATAGATCAACCCATCAATCTAACTTTCTATTTTCGTCTTTTTAATTATTTAAAAGAATTCTACTTATTTATAATATATTAATGATTAAATTTTTATAAAGCTCAAGTATCAAATATTTACTGTTATAATGGCATCATTAATATCAATTATAAAGGTTAAATATTCTTAATCCCCGTAAAATAGTAGGATTGGTCGAGTTGACTCGATAAAAAAAAATGAAAAACTTTCGAACAAATTTGAATTTTCAAATTTCTAAAAATTCAACCCAACTCAAATCTTAAAAAAATTTAACCTTGAATAGTTAATATTGATTGATGGATAGTCACTTCTAATCAAAGAAAGTTATTTAAAAAAAATTAAGACTACAAAACATAGAGATATTAAACTATTCGAGGGTTTCATAAGCCTCAGGGGAGGCTCTATATTGTATTTTGTTGAAGGTGAGGATTATTGGGAGGGAGTCAGATAGTAAGTTTATAAGTAAAGAATAGATCTTTGTTGGTATGAGTTTTTTTTTTTTGGGAAGCCTGAAGGAAAACTATGAAAGCCTATGCTCAAAGGGGATAATATTATACTATTGTGGAGAGTCGTGATTCTTAATATAAACGACTATTTATCGTGTTTTGCAGGTAGAACGGAAGACAGTTGTTTTCCAAAAGGTGATGGACAAGGCATCACAAGGTGAGCATGACATCACAAGCTACCATACTCATGCCGCTGAATTTGGCCAAAATGGGAAGCAAGAACCGAAAAAAAGCGATGAGGATGAAAGCAAAGACAAAGCAATTGGAGCTAAAAAAGCATTATTAGAGTCATCCAATGATAAAGACACAAACACAAACACGAGAGTTATAACAATGGCAGGAAAAAACAATGGAGCTTCCATGGAAATATTCCTCTCAGACAAAAACAAAAACAAAAACGAAGACACCACAAACAACAATCTTAAAGACAACAAAAGTACGAAGAAAACAATTAGGACTCGCAATGGACTGCCTATGAAAGCCTTTTTTAACAGCAATGTTCAAGGGATAAACAATTCCATTCTGATGGACTCCAAATTCACCCACCATGACCCTGGGATTCACCTTATGTTTTCCCCCATGCCGCCGCCGCCATCTGCCGATGCTGAAGATGATAAAGGACACCAATGAAGCTGTTTGCTTTCCTCTGATTTGTGCCTTCCAATTAATCATGTGTTTTTTTTTTT

mRNA sequence

ATGGCTGGTCAGCTCCCACGTCCATGGTTCCGTTTGGGTTCGTTGACTCGACCAACAACCGGCGCAACTACCGGTTCAGGGACGGACCAACCGCGCCCGGTTCCAGCCCGGATTCGACCGCCCGTAATCCGGACCGCCTCCTTTACTGAACCGGCAGAACCCACTACCCCACAGCCATCAAAATCGCCACCGCAAACCCCGATGAAAAAGGCAGCATCGCCGCCTCAGTTGCCTCTCCCTGGCTCACTAACCCCTCCGGTGAAAAAGCCCGCATCGCCACCGGCTGCAGCGGTGACCAGACCTGCTCTTCCGTCGCCGGCGAAACATATTAGCCCGAAGGGGAAAAGTGGTTCAGTTGTAGGGTCTCCGACGAAGAATGAGTTGGTTAATAAGGACAGTAGCAAACAGGCAAGTCCGGTTTCATCTCCTTTAGTTCCGAAGTCCATTCCGGCAGTTCCGACGCCATATCAGTCTCCGAAGCCGAAAGCTGCGGCGTCTCCGCCGTCACCACTGACTTTACCGCCGCCACAGTTGCAGTCAGTTGATGAGCCTAAACATGAGAGTATTCCTCAAGAGGTAGAACGGAAGACAGTTGTTTTCCAAAAGGTGATGGACAAGGCATCACAAGGTGAGCATGACATCACAAGCTACCATACTCATGCCGCTGAATTTGGCCAAAATGGGAAGCAAGAACCGAAAAAAAGCGATGAGGATGAAAGCAAAGACAAAGCAATTGGAGCTAAAAAAGCATTATTAGAGTCATCCAATGATAAAGACACAAACACAAACACGAGAGTTATAACAATGGCAGGAAAAAACAATGGAGCTTCCATGGAAATATTCCTCTCAGACAAAAACAAAAACAAAAACGAAGACACCACAAACAACAATCTTAAAGACAACAAAAGTACGAAGAAAACAATTAGGACTCGCAATGGACTGCCTATGAAAGCCTTTTTTAACAGCAATGTTCAAGGGATAAACAATTCCATTCTGATGGACTCCAAATTCACCCACCATGACCCTGGGATTCACCTTATGTTTTCCCCCATGCCGCCGCCGCCATCTGCCGATGCTGAAGATGATAAAGGACACCAATGAAGCTGTTTGCTTTCCTCTGATTTGTGCCTTCCAATTAATCATGTGTTTTTTTTTTT

Coding sequence (CDS)

ATGGCTGGTCAGCTCCCACGTCCATGGTTCCGTTTGGGTTCGTTGACTCGACCAACAACCGGCGCAACTACCGGTTCAGGGACGGACCAACCGCGCCCGGTTCCAGCCCGGATTCGACCGCCCGTAATCCGGACCGCCTCCTTTACTGAACCGGCAGAACCCACTACCCCACAGCCATCAAAATCGCCACCGCAAACCCCGATGAAAAAGGCAGCATCGCCGCCTCAGTTGCCTCTCCCTGGCTCACTAACCCCTCCGGTGAAAAAGCCCGCATCGCCACCGGCTGCAGCGGTGACCAGACCTGCTCTTCCGTCGCCGGCGAAACATATTAGCCCGAAGGGGAAAAGTGGTTCAGTTGTAGGGTCTCCGACGAAGAATGAGTTGGTTAATAAGGACAGTAGCAAACAGGCAAGTCCGGTTTCATCTCCTTTAGTTCCGAAGTCCATTCCGGCAGTTCCGACGCCATATCAGTCTCCGAAGCCGAAAGCTGCGGCGTCTCCGCCGTCACCACTGACTTTACCGCCGCCACAGTTGCAGTCAGTTGATGAGCCTAAACATGAGAGTATTCCTCAAGAGGTAGAACGGAAGACAGTTGTTTTCCAAAAGGTGATGGACAAGGCATCACAAGGTGAGCATGACATCACAAGCTACCATACTCATGCCGCTGAATTTGGCCAAAATGGGAAGCAAGAACCGAAAAAAAGCGATGAGGATGAAAGCAAAGACAAAGCAATTGGAGCTAAAAAAGCATTATTAGAGTCATCCAATGATAAAGACACAAACACAAACACGAGAGTTATAACAATGGCAGGAAAAAACAATGGAGCTTCCATGGAAATATTCCTCTCAGACAAAAACAAAAACAAAAACGAAGACACCACAAACAACAATCTTAAAGACAACAAAAGTACGAAGAAAACAATTAGGACTCGCAATGGACTGCCTATGAAAGCCTTTTTTAACAGCAATGTTCAAGGGATAAACAATTCCATTCTGATGGACTCCAAATTCACCCACCATGACCCTGGGATTCACCTTATGTTTTCCCCCATGCCGCCGCCGCCATCTGCCGATGCTGAAGATGATAAAGGACACCAATGA

Protein sequence

MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPSKSPPQTPMKKAASPPQLPLPGSLTPPVKKPASPPAAAVTRPALPSPAKHISPKGKSGSVVGSPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAASPPSPLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKKSDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASMEIFLSDKNKNKNEDTTNNNLKDNKSTKKTIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLMFSPMPPPPSADAEDDKGHQ

Homology

[Close]

BLAST of Carg26676 vs. NCBI nr
Match: XP_022958822.1 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 504.2 bits (1297), Expect = 3.7e-139
Identity = 364/366 (99.45%), Postives = 365/366 (99.73%), Query Frame = 0


Query: 1   MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
           MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS
Sbjct: 1   MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60

Query: 61  KSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKSGSVV 120
           KSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKSGSVV
Sbjct: 61  KSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKSGSVV 120

Query: 121 GSPTKNELVNKDSSKQASPVXXXXXXXSIPAVPTPYQSPKXXAAAXXXXXLTLPPPQLQS 180
           GSPTKNELVNKDSSKQASPVXXXXXXXSIPAVPTPYQSPKXXAAAXXXXXLTLPPPQLQS
Sbjct: 121 GSPTKNELVNKDSSKQASPVXXXXXXXSIPAVPTPYQSPKXXAAAXXXXXLTLPPPQLQS 180

Query: 181 VDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKKSDEDES 240
           VDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKKSDEDES
Sbjct: 181 VDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKKSDEDES 240

Query: 241 KDKAIGAKKALLESSNDXXXXXXXXXXXXAGKNNGASMEXXXXXXXXXXXXXXXXNNLKD 300
           KDKAIGAKKALLESSNDXXXXXXXXXXXXAGKNNGASMEXXXXXXXXXXXXXXXXNNLKD
Sbjct: 241 KDKAIGAKKALLESSNDXXXXXXXXXXXXAGKNNGASMEXXXXXXXXXXXXXXXXNNLKD 300

Query: 301 NKSTKKTIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLMFSPMPPPPSADAE 360
           NKSTKK IRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHL+FSPMPPPPSADAE
Sbjct: 301 NKSTKKAIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLLFSPMPPPPSADAE 360

Query: 361 DDKGHQ 367
           DDKGHQ
Sbjct: 361 DDKGHQ 366

[Close]

BLAST of Carg26676 vs. NCBI nr
Match: XP_022958823.1 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 460.3 bits (1183), Expect = 6.1e-126
Identity = 334/366 (91.26%), Postives = 335/366 (91.53%), Query Frame = 0


Query: 1   MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
           MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS
Sbjct: 1   MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60

Query: 61  KSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKSGSVV 120
           KSPP           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        
Sbjct: 61  KSPP-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 GSPTKNELVNKDSSKQASPVXXXXXXXSIPAVPTPYQSPKXXAAAXXXXXLTLPPPQLQS 180
              TKNELVNKDSSKQASP XXXXXXXSIPAVPTPYQSPK  AAAXXXXX     PQLQS
Sbjct: 121 XXXTKNELVNKDSSKQASPXXXXXXXXSIPAVPTPYQSPKPKAAAXXXXXXXXXXPQLQS 180

Query: 181 VDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKKSDEDES 240
           VDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKKSDEDES
Sbjct: 181 VDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKKSDEDES 240

Query: 241 KDKAIGAKKALLESSNDXXXXXXXXXXXXAGKNNGASMEXXXXXXXXXXXXXXXXNNLKD 300
           KDKAIGAKKALLESSNDXXXXXXXXXXXXAGKNNGASMEXXXXXXXXXXXXXXXXNNLKD
Sbjct: 241 KDKAIGAKKALLESSNDXXXXXXXXXXXXAGKNNGASMEXXXXXXXXXXXXXXXXNNLKD 300

Query: 301 NKSTKKTIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLMFSPMPPPPSADAE 360
           NKSTKK IRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHL+FSPMPPPPSADAE
Sbjct: 301 NKSTKKAIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLLFSPMPPPPSADAE 355

Query: 361 DDKGHQ 367
           DDKGHQ
Sbjct: 361 DDKGHQ 355

[Close]

BLAST of Carg26676 vs. NCBI nr
Match: XP_023006596.1 (serine/arginine repetitive matrix protein 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 454.9 bits (1169), Expect = 2.6e-124
Identity = 311/366 (84.97%), Postives = 315/366 (86.07%), Query Frame = 0


Query: 1   MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
           MA QLPRPWFRLGSLTRPTTGATTG GTDQPRPVPARIRPPVIRTASFTEPAEPTTPQ S
Sbjct: 1   MAAQLPRPWFRLGSLTRPTTGATTGPGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQQS 60

Query: 61  KSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKSGSVV 120
           KSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        
Sbjct: 61  KSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 GSPTKNELVNKDSSKQASPVXXXXXXXSIPAVPTPYQSPKXXAAAXXXXXLTLPPPQLQS 180
            SPTKNELVNKDS KQASPV       SIPAVPTPYQSPKXX AAXXXXX TLPPPQLQS
Sbjct: 121 XSPTKNELVNKDSRKQASPVSSPLVPKSIPAVPTPYQSPKXXTAAXXXXXXTLPPPQLQS 180

Query: 181 VDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKKSDEDES 240
           VDEPKHE+IPQ VERKTVVFQKV+DKASQ EHDI SYHT AAEFGQNGKQEPKKSDEDES
Sbjct: 181 VDEPKHETIPQAVERKTVVFQKVIDKASQAEHDIASYHTRAAEFGQNGKQEPKKSDEDES 240

Query: 241 KDKAIGAKKALLESSNDXXXXXXXXXXXXAGKNNGASMEXXXXXXXXXXXXXXXXNNLKD 300
           KDKAIGA KALLESSND            AGKNNGA ME        XXXXX   NNLKD
Sbjct: 241 KDKAIGATKALLESSNDKDTNTNTKVITMAGKNNGAFMEIFLSDKNKXXXXXTTNNNLKD 300

Query: 301 NKSTKKTIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLMFSPMPPPPSADAE 360
           NKSTKKTIRTRNG+PMKAFFNSNVQGINNSILMDSKFTHHDPGIHL+FSPMPPPPSADAE
Sbjct: 301 NKSTKKTIRTRNGVPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLLFSPMPPPPSADAE 360

Query: 361 DDKGHQ 367
           DDKGHQ
Sbjct: 361 DDKGHQ 366

[Close]

BLAST of Carg26676 vs. NCBI nr
Match: XP_023006599.1 (probable serine/threonine-protein kinase samkC isoform X2 [Cucurbita maxima])

HSP 1 Score: 453.4 bits (1165), Expect = 7.5e-124
Identity = 302/366 (82.51%), Postives = 306/366 (83.61%), Query Frame = 0


Query: 1   MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
           MA QLPRPWFRLGSLTRPTTGATTG GTDQPRPVPARIRPPVIRTASFTEPAEPTTPQ S
Sbjct: 1   MAAQLPRPWFRLGSLTRPTTGATTGPGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQQS 60

Query: 61  KSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKSGSVV 120
           KSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              
Sbjct: 61  KSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKHI---------- 120

Query: 121 GSPTKNELVNKDSSKQASPVXXXXXXXSIPAVPTPYQSPKXXAAAXXXXXLTLPPPQLQS 180
            SPTKNELVNKDS KQASPV       SIPAVPTPYQSPK   AA  XXXLTLPPPQLQS
Sbjct: 121 -SPTKNELVNKDSRKQASPVSSPLVPKSIPAVPTPYQSPKPKTAASPXXXLTLPPPQLQS 180

Query: 181 VDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKKSDEDES 240
           VDEPKHE+IPQ VERKTVVFQKV+DKASQ EHDI SYHT AAEFGQNGKQEPKKSDEDES
Sbjct: 181 VDEPKHETIPQAVERKTVVFQKVIDKASQAEHDIASYHTRAAEFGQNGKQEPKKSDEDES 240

Query: 241 KDKAIGAKKALLESSNDXXXXXXXXXXXXAGKNNGASMEXXXXXXXXXXXXXXXXNNLKD 300
           KDKAIGA KALLESSND            AGKNNGA ME        XXXXX   NNLKD
Sbjct: 241 KDKAIGATKALLESSNDKDTNTNTKVITMAGKNNGAFMEIFLSDKNKXXXXXTTNNNLKD 300

Query: 301 NKSTKKTIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLMFSPMPPPPSADAE 360
           NKSTKKTIRTRNG+PMKAFFNSNVQGINNSILMDSKFTHHDPGIHL+FSPMPPPPSADAE
Sbjct: 301 NKSTKKTIRTRNGVPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLLFSPMPPPPSADAE 355

Query: 361 DDKGHQ 367
           DDKGHQ
Sbjct: 361 DDKGHQ 355

[Close]

BLAST of Carg26676 vs. NCBI nr
Match: XP_023547672.1 (pollen-specific leucine-rich repeat extensin-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 415.6 bits (1067), Expect = 1.7e-112
Identity = 305/366 (83.33%), Postives = 310/366 (84.70%), Query Frame = 0


Query: 1   MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
           MAGQLPRPWFRLGSLTRPTT ATTG GTDQPRP+PARIRPPVIRTASFTEPAEPTTPQ S
Sbjct: 1   MAGQLPRPWFRLGSLTRPTTAATTGPGTDQPRPIPARIRPPVIRTASFTEPAEPTTPQQS 60

Query: 61  KSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKSGSVV 120
           KSPP           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        
Sbjct: 61  KSPP-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 GSPTKNELVNKDSSKQASPVXXXXXXXSIPAVPTPYQSPKXXAAAXXXXXLTLPPPQLQS 180
              TKNELVNKDSSKQASPV       SIPAVPTPYQSPK  AA XXXXX      QLQS
Sbjct: 121 XXXTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQSPKPKAAXXXXXXXXXXXXQLQS 180

Query: 181 VDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKKSDEDES 240
           +DEPKHESIPQEVERKTVVFQK MDKASQGEHDITSYHTH AEFGQNGKQEPKKSDEDES
Sbjct: 181 IDEPKHESIPQEVERKTVVFQKAMDKASQGEHDITSYHTHGAEFGQNGKQEPKKSDEDES 240

Query: 241 KDKAIGAKKALLESSNDXXXXXXXXXXXXAGKNNGASMEXXXXXXXXXXXXXXXXNNLKD 300
           KDKAIGAKKALLESSN XXXXXXXXXXXX          XXXXXXXXXXXXXXXX NLKD
Sbjct: 241 KDKAIGAKKALLESSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLKD 300

Query: 301 NKSTKKTIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLMFSPMPPPPSADAE 360
           NKSTKKT+RTRNG+PMKAFFNSNVQGINNSILMDSKFTHHDPGIHL+FSPMPPPPSAD E
Sbjct: 301 NKSTKKTLRTRNGVPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLLFSPMPPPPSADGE 355

Query: 361 DDKGHQ 367
           DDKGHQ
Sbjct: 361 DDKGHQ 355

[Close]

BLAST of Carg26676 vs. TAIR10
Match: AT2G46630.1 (unknown protein)

HSP 1 Score: 55.8 bits (133), Expect = 6.3e-08
Identity = 28/54 (51.85%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 312 NGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLMFSPMPPPPSADAEDDKGH 366
           + LPMKAF NSNVQ INNSI+ +S  +HHDPG+HL  S  P   +     D G+
Sbjct: 335 SNLPMKAFMNSNVQMINNSIVYNSTASHHDPGVHLKISRKPGSDNGFHVSDYGN 388

[Close]

BLAST of Carg26676 vs. TAIR10
Match: AT1G75260.1 (oxidoreductases, acting on NADH or NADPH)

HSP 1 Score: 43.1 bits (100), Expect = 4.2e-04
Identity = 16/31 (51.61%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 318 AFFNSNVQGINNSILMDSKFTHHDPGIHLMF 349
           A+ N N QGINNSI+++S  + +DPG+H+ F
Sbjct: 407 AYINGNTQGINNSIVVESSVSENDPGVHMSF 437

[Close]

BLAST of Carg26676 vs. TrEMBL
Match: tr|A0A1S3CC40|A0A1S3CC40_CUCME (zyxin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498789 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.5e-43
Identity = 189/394 (47.97%), Postives = 213/394 (54.06%), Query Frame = 0


Query: 1   MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
           MA QLPRPWFRLGS+TRP    TT    +QPRPVPAR+RPP+IR A+ T   +P      
Sbjct: 1   MASQLPRPWFRLGSMTRP----TTTPNPEQPRPVPARVRPPIIRPAALT---DPXXXXXX 60

Query: 61  KSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKSGSVV 120
               XXXXXXXXXXXXXXXXXX                              K KS SVV
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXASPLRVLPSPSSGQGGGTAMASPAVNPNSPKEKSSSVV 120

Query: 121 GSP------TKNELVNKDSSKQASPVXXXXXXXSIPAVPTPYQSPKXXAAAXXXXXLTLP 180
           GSP                SKQ SP                YQ   XX   XXXXX    
Sbjct: 121 GSPKGXXXXXXXXXXXXXXSKQPSPFPSPSIPKXXXXXXXXYQXXXXXXXXXXXXXXXXX 180

Query: 181 PPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEH----DITSYHTHAAE-FGQNGK 240
             QLQSV E KHE+IPQEVERKTVVFQKVMDK SQ E     +IT+Y TH +  F +NGK
Sbjct: 181 XXQLQSVAETKHETIPQEVERKTVVFQKVMDKPSQEEEHHHLNITNYRTHTSGLFDKNGK 240

Query: 241 QEPKKSDEDESKDKAIGAKKALLESSND------XXXXXXXXXXXXAGKNNGASME---- 300
           QE  K D+ +  +  +   K  +   N                   AG+N GA ME    
Sbjct: 241 QESNKGDDGDHVENGVSKNKGTIFGGNSNFKRTAFDHDNHARVITMAGENKGAFMEINLS 300

Query: 301 -------XXXXXXXXXXXXXXXXNNLKDNKSTKKTIRTRNGLPMKAFFNSNVQGINNSIL 360
                  XXXXXXXXXXXXXXXX     +K+  K   TRN LPM+AFFNSNVQGINNSIL
Sbjct: 301 SDXXXXXXXXXXXXXXXXXXXXXXXXXXSKNKTKGSNTRNVLPMRAFFNSNVQGINNSIL 360

Query: 361 MDSKFTHHDPGIHLMFSPMPPPPSADAEDDKGHQ 367
           MDSKF+HHDPGIHL+FS +P  P  D EDD+ HQ
Sbjct: 361 MDSKFSHHDPGIHLVFSSIPTSP--DDEDDQQHQ 385

[Close]

BLAST of Carg26676 vs. TrEMBL
Match: tr|A0A1S3CAE9|A0A1S3CAE9_CUCME (zyxin isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498789 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 7.3e-43
Identity = 199/388 (51.29%), Postives = 225/388 (57.99%), Query Frame = 0


Query: 1   MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
           MA QLPRPWFRLGS+TRP    TT    +QPRPVPAR+RPP+IR A+ T   +P      
Sbjct: 1   MASQLPRPWFRLGSMTRP----TTTPNPEQPRPVPARVRPPIIRPAALT---DPXXXXXX 60

Query: 61  KSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKSGSVV 120
               XXXXXXXXXXXXXXXXXXXXXXX  XXX                    K KS SVV
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXVLXXXSSGQGGGTAMASPAVNPNSPKEKSSSVV 120

Query: 121 GSPTKNELVNKDSSKQASPVXXXXXXXSIPAVPTPYQSPKXXAAAXXXXXLTLPPPQLQS 180
           GSP   + +N   SKQ SP     XXX             XX   XXXXX      QLQS
Sbjct: 121 GSP---KTIN---SKQPSPFPSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLQS 180

Query: 181 VDEPKHESIPQEVERKTVVFQKVMDKASQGEH----DITSYHTHAAE-FGQNGKQEPKKS 240
           V E KHE+IPQEVERKTVVFQKVMDK SQ E     +IT+Y TH +  F +NGKQE  K 
Sbjct: 181 VAETKHETIPQEVERKTVVFQKVMDKPSQEEEHHHLNITNYRTHTSGLFDKNGKQESNKG 240

Query: 241 DEDESKDKAIGAKKALLESSND------XXXXXXXXXXXXAGKNNGASME---------- 300
           D+ +  +  +   K  +   N                   AG+N GA ME          
Sbjct: 241 DDGDHVENGVSKNKGTIFGGNSNFKRTAFDHDNHARVITMAGENKGAFMEINLSSDXXXX 300

Query: 301 -XXXXXXXXXXXXXXXXNNLKDNKSTKKTIRTRNGLPMKAFFNSNVQGINNSILMDSKFT 360
            XXXXXXXXXXXXXXXX     +K+  K   TRN LPM+AFFNSNVQGINNSILMDSKF+
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXSKNKTKGSNTRNVLPMRAFFNSNVQGINNSILMDSKFS 360

Query: 361 HHDPGIHLMFSPMPPPPSADAEDDKGHQ 367
           HHDPGIHL+FS +P  P  D EDD+ HQ
Sbjct: 361 HHDPGIHLVFSSIPTSP--DDEDDQQHQ 373

[Close]

BLAST of Carg26676 vs. TrEMBL
Match: tr|A0A0A0KAP9|A0A0A0KAP9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107920 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 9.9e-40
Identity = 199/412 (48.30%), Postives = 229/412 (55.58%), Query Frame = 0


Query: 1   MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
           MA QLPRPWFRLGS+TRP    TT    +Q RPVPAR+RPP+IR A+ T+PA        
Sbjct: 1   MASQLPRPWFRLGSMTRP----TTAPNPEQSRPVPARVRPPIIRPAALTDPAXXXXXXXX 60

Query: 61  KSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKSGSVV 120
               XXXXXXXXXXXXXXXXXXXXXXXXXX                         S +V+
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGQGGGTAM---------------ASPAVI 120

Query: 121 GSPTKNELVNKDSSKQASPVXXXXXXXSIPAV--PTPYQSPK----------------XX 180
            S  K +             XXXXXXX       P+P+ SP                 XX
Sbjct: 121 PSSPKEKXXXXXXXXXXXXXXXXXXXXXXXXXXQPSPFPSPSXXXXXXXXXXXXXXXXXX 180

Query: 181 AAAXXXXXLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGE----HDITSYH 240
              XXXXX    PPQLQSV E K E+IPQEVERKTVVFQKVMDK SQ E     +IT+Y 
Sbjct: 181 XXXXXXXXXXXXPPQLQSVAETKDETIPQEVERKTVVFQKVMDKPSQAEEHHLQNITNYR 240

Query: 241 THAAEFGQNGKQEPKKSDEDESKDKAIGA-------------KKALLESSNDXXXXXXXX 300
           TH +EF +NGKQE  K D+ +                     K+   +  N+        
Sbjct: 241 THTSEFDKNGKQESNKGDDGDRDXXXXXXXXXXXXXXXXXXYKRTAFDHDNN------TR 300

Query: 301 XXXXAGKNNGASMEXXXXXXXXXXXXXXXXN--------NLKD-NKSTKKT--IRTRNGL 360
               AG+N GA ME     XXXXXXXXXXX         ++KD NKS  KT  I+TRN L
Sbjct: 301 VITMAGENKGAFMEINLSSXXXXXXXXXXXXXXXXXXVVSVKDSNKSINKTKGIKTRNVL 360

Query: 361 PMKAFFNSNVQGINNSILMDSKFTHHDPGIHLMFSPMPPPPSADAEDDKGHQ 367
           PM+AFFNSNVQGINNSILMDSKF+HHDPGIHL+FS +P  P  D EDD+ HQ
Sbjct: 361 PMRAFFNSNVQGINNSILMDSKFSHHDPGIHLVFSSLPTSP--DDEDDQQHQ 385

[Close]

BLAST of Carg26676 vs. TrEMBL
Match: tr|B9T512|B9T512_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0144270 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.5e-11
Identity = 79/233 (33.91%), Postives = 102/233 (43.78%), Query Frame = 0


Query: 150 PAVPTPYQSPKXXAAAXXXXXLTLPPPQLQSVDEPKHESIPQEVERKTVVFQKVMDK--- 209
           P V +P +SPK     XXXXX  LPP +++S D      IP   E+KTVV QK +DK   
Sbjct: 261 PVVQSPPRSPKLNPXXXXXXXXILPPAKIKS-DAETEAKIPLVAEQKTVVVQKTIDKPKP 320

Query: 210 --ASQGEHDITSYHTHAAEFGQNGKQEPKKSDEDESKDKAIGAKKALLESSNDXXXXXXX 269
              + G  +    +   +  G NGKQE  K D  E+K+K +   K +   S D       
Sbjct: 321 WLTNGGNSERDLVNAVKSSIGLNGKQETTK-DHGETKEKVL--HKKIFSGSED----GGM 380

Query: 270 XXXXXAGKNNGASMEXXXXXXXXXXXXXXXXN-NLKDNKSTKKTIR-------------- 329
                AG+N GA ME                + + KDN      I+              
Sbjct: 381 RVITVAGENKGAFMEVIRSPNKKHVFEGSPHHLHKKDNDPKSDGIKWISYSSNXXXXXXX 440

Query: 330 -------------TRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLMFS 350
                          N LPM AF NSNVQG+NNSI+ +S  THHDPG+HL  S
Sbjct: 441 XXXXXXXXXXXXXXXNSLPMTAFMNSNVQGVNNSIVYNSSCTHHDPGVHLALS 485

[Close]

BLAST of Carg26676 vs. TrEMBL
Match: tr|M1ABI2|M1ABI2_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102599437 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.3e-11
Identity = 71/234 (30.34%), Postives = 99/234 (42.31%), Query Frame = 0


Query: 128 LVNKDSSKQASPVXXXXXXXSIPAVPTPYQSPKXXAAAXXXXXLTLPPPQLQSVDEPKHE 187
           L+N+ S  +A P        ++    T Y      A +     L LPP QL+        
Sbjct: 202 LINQSSPSKAPPPSQNVFQPNLVKSQT-YSPQTKPAVSHPPSPLKLPPSQLE-----LES 261

Query: 188 SIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKKSDEDESKDKAIGA 247
            IP +V++K+VV  +     + G         H  +  +NG        E   KDK +  
Sbjct: 262 KIPSQVDQKSVVVHETTRANTNGH--------HVLQTARNGNTVESWKQETVKKDKGVQK 321

Query: 248 KKALLESSNDXXXXXXXXXXXXAGKNNGASMEXXXXXXXXXXXXXXXXNNLKD------- 307
           KK    S++D            AG+N GA ME                 + K        
Sbjct: 322 KKV---SNSDATDDFGTSVLTLAGENKGAIMELSPSRKTYSPQSLQKKGSPKSWNSEDDG 381

Query: 308 ----NKSTKKTIRTRN-GLPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLMFS 350
               N+S +K  + +N  LPM AF NSNVQGINNSIL ++  THHDPG+HL+FS
Sbjct: 382 EKSGNESGRKGDKMQNKSLPMTAFMNSNVQGINNSILHNASCTHHDPGVHLVFS 418

The following BLAST results are available for this feature:

BLAST of Carg26676 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958822.1	3.7e-139	99.45	pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucurbit...	[more]
XP_022958823.1	6.1e-126	91.26	pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 [Cucurbit...	[more]
XP_023006596.1	2.6e-124	84.97	serine/arginine repetitive matrix protein 1 isoform X1 [Cucurbita maxima]	[more]
XP_023006599.1	7.5e-124	82.51	probable serine/threonine-protein kinase samkC isoform X2 [Cucurbita maxima]	[more]
XP_023547672.1	1.7e-112	83.33	pollen-specific leucine-rich repeat extensin-like protein 1 [Cucurbita pepo subs...	[more]

BLAST of Carg26676 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46630.1	6.3e-08	51.85	unknown protein	[more]
AT1G75260.1	4.2e-04	51.61	oxidoreductases, acting on NADH or NADPH	[more]

BLAST of Carg26676 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg26676 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CC40\|A0A1S3CC40_CUCME	2.5e-43	47.97	zyxin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498789 PE=4 SV=1	[more]
tr\|A0A1S3CAE9\|A0A1S3CAE9_CUCME	7.3e-43	51.29	zyxin isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498789 PE=4 SV=1	[more]
tr\|A0A0A0KAP9\|A0A0A0KAP9_CUCSA	9.9e-40	48.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107920 PE=4 SV=1	[more]
tr\|B9T512\|B9T512_RICCO	2.5e-11	33.91	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0144270 PE=4 SV=1	[more]
tr\|M1ABI2\|M1ABI2_SOLTU	4.3e-11	30.34	Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102599437 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26676-RA	Carg26676-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 285..305
None	No IPR available	PANTHER	PTHR33472:SF1	EXTENSIN-RELATED	coord: 6..349
None	No IPR available	PANTHER	PTHR33472	FAMILY NOT NAMED	coord: 6..349

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26676	Cla006690	Watermelon (97103) v1	carwmB0902
Carg26676	Csa6G107920	Cucumber (Chinese Long) v2	carcuB0915
Carg26676	MELO3C022249	Melon (DHL92) v3.5.1	carmeB0887
Carg26676	ClCG06G002780	Watermelon (Charleston Gray)	carwcgB0877
Carg26676	CSPI06G08570	Wild cucumber (PI 183967)	carcpiB0936
Carg26676	Cucsa.120820	Cucumber (Gy14) v1	carcgyB1018
Carg26676	CmaCh17G005030	Cucurbita maxima (Rimu)	carcmaB1239
Carg26676	CmoCh17G004750	Cucurbita moschata (Rifu)	carcmoB1210
Carg26676	Lsi09G016540	Bottle gourd (USVL1VR-Ls)	carlsiB821
Carg26676	Cp4.1LG12g04320	Cucurbita pepo (Zucchini)	carcpeB1250
Carg26676	MELO3C022249.2	Melon (DHL92) v3.6.1	carmedB0895
Carg26676	CsaV3_6G008950	Cucumber (Chinese Long) v3	carcucB0938
Carg26676	Cla97C06G112150	Watermelon (97103) v2	carwmbB0942
Carg26676	Bhi12G001940	Wax gourd	carwgoB1045

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26676	Cucumber (Gy14) v2	carcgybB0888
Carg26676	Bottle gourd (USVL1VR-Ls)	carlsiB820