CsaV3_2G007760 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.AGAAGAAGCGTGGATGTTGTAATGGAGACGAAAGGCGGTAAGAAGAAATCTAATAGTAGTAGTAGTAGCAAGAGTAGTAAAAGGCAACAATACGAAGCTCCTCTTGGTTACATTATTGAAGACGTTCGTCCTCACGGTGGCATTGAGAAGTTCCGATCTGCTGCTTATTCAAAT AGAAGAAGCGTGGATGTTGTAATGGAGACGAAAGGCGGTAAGAAGAAATCTAATAGTAGTAGTAGTAGCAAGAGTAGTAAAAGGCAACAATACGAAGCTCCTCTTGGTTACATTATTGAAGACGTTCGTCCTCACGGTGGCATTGAGAAGTTCCGATCTGCTGCTTATTCAAAT AGAAGAAGCGTGGATGTTGTAATGGAGACGAAAGGCGGTAAGAAGAAATCTAATAGTAGTAGTAGTAGCAAGAGTAGTAAAAGGCAACAATACGAAGCTCCTCTTGGTTACATTATTGAAGACGTTCGTCCTCACGGTGGCATTGAGAAGTTCCGATCTGCTGCTTATTCAAAT RRSVDVVMETKGGKKKSNSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
BLAST of CsaV3_2G007760 vs. NCBI nr
Match: CBI36591.3 (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 65.1 bits (157), Expect = 9.1e-08 Identity = 46/58 (79.31%), Postives = 49/58 (84.48%), Query Frame = 0
BLAST of CsaV3_2G007760 vs. NCBI nr
Match: CAN76947.1 (hypothetical protein VITISV_017166 [Vitis vinifera]) HSP 1 Score: 64.3 bits (155), Expect = 1.5e-07 Identity = 45/57 (78.95%), Postives = 47/57 (82.46%), Query Frame = 0
BLAST of CsaV3_2G007760 vs. NCBI nr
Match: KGN61071.1 (hypothetical protein Csa_2G036690 [Cucumis sativus]) HSP 1 Score: 63.9 bits (154), Expect = 2.0e-07 Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of CsaV3_2G007760 vs. NCBI nr
Match: XP_008452459.1 (PREDICTED: S-adenosylmethionine decarboxylase proenzyme-like [Cucumis melo]) HSP 1 Score: 63.2 bits (152), Expect = 3.4e-07 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of CsaV3_2G007760 vs. NCBI nr
Match: XP_023536821.1 (S-adenosylmethionine decarboxylase proenzyme-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 63.2 bits (152), Expect = 3.4e-07 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of CsaV3_2G007760 vs. TAIR10
Match: AT3G02468.1 (conserved peptide upstream open reading frame 9) HSP 1 Score: 52.8 bits (125), Expect = 8.5e-08 Identity = 22/28 (78.57%), Postives = 26/28 (92.86%), Query Frame = 0
BLAST of CsaV3_2G007760 vs. TAIR10
Match: AT3G25572.1 (conserved peptide upstream open reading frame 11) HSP 1 Score: 52.0 bits (123), Expect = 1.4e-07 Identity = 23/28 (82.14%), Postives = 26/28 (92.86%), Query Frame = 0
BLAST of CsaV3_2G007760 vs. TAIR10
Match: AT5G15948.1 (conserved peptide upstream open reading frame 10) HSP 1 Score: 52.0 bits (123), Expect = 1.4e-07 Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0
BLAST of CsaV3_2G007760 vs. TrEMBL
Match: tr|A5BJ64|A5BJ64_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_017166 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.0e-07 Identity = 45/57 (78.95%), Postives = 47/57 (82.46%), Query Frame = 0
BLAST of CsaV3_2G007760 vs. TrEMBL
Match: tr|A0A0A0LM83|A0A0A0LM83_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036690 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.3e-07 Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of CsaV3_2G007760 vs. TrEMBL
Match: tr|A0A1S3BUN9|A0A1S3BUN9_CUCME (S-adenosylmethionine decarboxylase proenzyme-like OS=Cucumis melo OX=3656 GN=LOC103493485 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.3e-07 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of CsaV3_2G007760 vs. TrEMBL
Match: tr|A0A2P4L5H9|A0A2P4L5H9_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_40353 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.0e-07 Identity = 44/57 (77.19%), Postives = 47/57 (82.46%), Query Frame = 0
BLAST of CsaV3_2G007760 vs. TrEMBL
Match: tr|A0A200QGC0|A0A200QGC0_9MAGN (S-adenosyl-l-methionine decarboxylase leader peptide OS=Macleaya cordata OX=56857 GN=BVC80_1353g2 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-06 Identity = 33/58 (56.90%), Postives = 37/58 (63.79%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |