CsaV3_2G005130 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G005130
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	E3 ubiquitin-protein ligase topors
Location	chr2 : 2795961 .. 2799647 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGAAAGTCCATGGAATTGCAGAGCACTGCATCAATGGAGATGGAGACAAGAACTTCCACTTCGGACTATACGAACCCTTGCCCGATCTGCCTTGGACCCATAAATCAATCTTCCTATCTCGACAAGTGCTTTCGTAAGTTTTTATTTCTCTTAATCTGATCTTTCTTTCGTTTTTCTTAAATTTTCCTGTCATCTAAATAAAATTTGATTTAGAAAAATTATTCATTTTTATGAATTGGGGTTTCTTTTTTCCGATTCCTGTAGTGACCCATTTGGAAATATTCCTTTATGTGTTACTGTATCAACAGAAGAATTAAGAATCACTCTCTTCTCCTTTTATTAGGAGATTTTAGCTATTAGCTTTTAGCTCTTCCCCCAATTATCAAGGTTTCTGCCACTGTTATTCGTATTTGATTAACGAAATTGTTTGATGACTATAGTATCTTGTTTGATAATTAACTGAATTCATTTGGTATAGAGATGAACTAGCTAATTCCTTAGCTTTGAGCGTATAAAAATTTCTTCTGGAGATGCTTAATTTGATTTAATATACTCAGTTCTTTAGTGGCTGTATCCTTTAGGCAAGGAATTTTGCGTGTTAATATGGCTTCATCTTCTTCGATGAAATGGAAAACAGAAACAGCAGCGAGAATGCTTTAGTTTTCTTTGATTTGTTGAATTTGTAATCATTGATGAACTCCTTCACTGTCTTTGAGATGAATATGTTCATTTAATTTATTTTTAATATACTTGCTTATATCTAGGCATGAATATTAGTTTGGTTTATGTTGTGTGTAATGCATGGAATATCGAAATGAAAGAGGAAATAACACGTAGCTTAAGATTTTACATTTGGTATCATGTTGATTACCAGTAATTTCCAAAGTTTAAACCTTGAAGTTTTGGTGAATTTGATCATTTAGTTAACTCTAAAGAATCTATTAGTTCATTCATGTTGAGTACGATGTACCATTTAGAAAAAGAGGAATGTTAAGAAGTTTGAATGGTTTTAGCTTTCAACTCTATTTATATGCCTTCCAGATAACTTTTGTTACAATTGCATTGTACAATGGACCAAAGTGGTTTCTGGGAAGCGCTCCTGCACACTTTCCTCCATTAAATGTCCTTTATGCAAGGTTCAATTTTTCTTCCCCCGGTTAATCTTGTTTTATTTTAGCATTCCATACTTCTAGTATTGCATTTCTTATTTTTTTTTATAACTAATCACCAGACAGAAAGTTCTTCTATAATACATGGATTAGATGGACACAATTTCCAAAGACATTATGTTAATCCGGATTTCCAGGATAGGTATCTTCCTTTTGACATTTCCCCTAGTTCTTCTATTTTTATTTTCTCTACCTTAATTGACTACGGCTATTATTAATGTTATTTGCAGCTTTATCTTATCAAAAGCTCATAGGTATAGATTACAGTGCTATTATACTGAACCAGGTTCGTTTTTTTGTTTATCCTTCAACTTATTATGTGATGATGCTCCAACATTTACATCCGGTTACTCGGATTTATGAATTTCCCTAATTGTCTACATGTAGGTTTCTTGAATGACATATTTGATGTACAGAGGTATTGGAAGTTACAGAAGTATCTCCAGGCAAACCAGTGGCTTGAAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGGTTAGTGTCTTATTTTCTTTCATCACATTTGTACTTCTATGGGATATTGCTTCCTTTGGCCCCTTTTTTCTATGGAGAATTGTTTGCATCCAATATCAAACAACATTCTCAAGAGTCAAGACCAAATAGGTGGATGGGAAAGGGAGGGAGCTCTTCATTCTAACAGCCGGATTCTTGGGGAAATGAATTCTATCACTGCTCCCAGTAGTCTGTTAACGCCCATCAATAAATGGAGCATTTGTTAAGGAGACACAAGACAAGCTAGAAAGTATTTTTTCTGCAAATCATCCCAAGGGTTTCTAACACAGGCATCCAACTATCCAAGGAATTGGTATCCTATTGAAACATAGAAACCATTGGCTTGTGTCGCCTACTTGCTTCAAGCATATATGGAATGGCTGATCATTCATTGAGTTCATGAGTTTTTTAAGACCTCACTAATCAGGCTTACACTTTTGAGCTCATAATGAATGAAATTCACCCCGGATGAAGATTGAATCTCCCATTTGTGGCATAGTGGGCCGTAGGATGGGTTGTCCTTCTAAGGATGAGGGAGGGGGTTTGTTTATTGATTGGGGATTTAAGAACTTTATTTTATTTCAATGGTGTGGAAACCTGTGTGTATTGTGGAAGTAGACAAGATGAGGTAAAGATGTGTCACTTTCTTTAACTGTGAGGAATTGAGAACTCTGTTTTCGTAGAAAATGGATTACTGTATACAAAACGAGATAGCGGTAGTAGATTTATGTTACTGTTTCTATTGCATAGTTTCTTGATTTATCTATTCTGTTTCTCAGCAGTACAGTTCATTGTTGATGATGACTGATAGTGTTTTATTCACTTTTACAGGAAGAAGATGTTGACATAATTATGCATCACTTTCTTGGTTTAATTAACTCATTTTTTCGTAGGTAATACTAATAATCATCCATCATTGCATTCTATACTTTGGTCAAATAAAAAATTGGTTTAAAACTCCAATTTCGTGGATAGTCCCTAAATTTTAGTTTGTAATAAGTCCCTGTGAGCAGTTTTTATAATATAGTGTCCATATCATAAAAGTATTGTAAAAAAATAATGGAATTTCTTACCCAAGTATTTGCAATTGGTAGCACTTTTGGAGTTAATTGTATGTATAGCAACATTTTTAAAGAATTGCAAAATTTATCAATGCTAGACTCTTTCGACGATCATTGATAGACTCTGATCAATGACATAGTTAAAAGGCACTGAGAGCTTATCTAAATTTTGCTATATCTACAAATTCTTTCGCATTTTGTGCTATATCTTGGGATATTTTAGATCAGATTGTTATATTTGCAACTTGATAAACTAATTAGGGATCAGATGTGCTTATAAGTTACAAAGATTAAGTTTAAGTTGTTACCTAATAAAAACTGATGCTTACTCTAACTAAATCGTTATGACAAGTAAAAAGACTAAATTGTTACGTACTAAAGATTAAATGACTAAGTTGTTACACATTTGGAAGTAGATAGACAAAATTGTTACAAACTAGAGAGTTAGGGCTGATCTTTTTTCTTTTTCTTCAATGCTATTCATTTTGGCTTGACATGTAGAATTGTTCAAAACTCATTTTCATTCATCTTTCTTACTACGACCTATCCCCTATCCACATGAATGTAAATATGCATGGATATGATAACTGATTACACTCTGAAATCTGCTTCTTGTTCTTTGTTTTTTCTCCTCAAAGAAATGAACCTGAGTATCAAACAGAAACTCCTGAACTGAAGAGGAAGAGGTTTAGCCAAACGATTCTTGATGCAGCAAAGCCATTCCTTTCAGCAAGAGCAGATCGATTCATTCTCGAGTTGGAGCTATTTCTTGCTTCAGGTTTGAACATTGAAGCCTATGATTCAGTTTACTTGCAACGGTTGGGTTGGAACAAGCCTATAGTGCCGAGCGTGGCTAACGAAGAAGATCTTGGACTCAAATCTGTAACTCCATACTTGTATATCTTTGATTGTGACCCTGATGATGGTGATTAA

mRNA sequence

ATGTCGGGAAAGTCCATGGAATTGCAGAGCACTGCATCAATGGAGATGGAGACAAGAACTTCCACTTCGGACTATACGAACCCTTGCCCGATCTGCCTTGGACCCATAAATCAATCTTCCTATCTCGACAAGTGCTTTCATAACTTTTGTTACAATTGCATTGTACAATGGACCAAAGTGGTTTCTGGGAAGCGCTCCTGCACACTTTCCTCCATTAAATGTCCTTTATGCAAGACAGAAAGTTCTTCTATAATACATGGATTAGATGGACACAATTTCCAAAGACATTATGTTAATCCGGATTTCCAGGATAGCTTTATCTTATCAAAAGCTCATAGGTATAGATTACAGTGCTATTATACTGAACCAGGTTTCTTGAATGACATATTTGATGTACAGAGGTATTGGAAGTTACAGAAGTATCTCCAGGCAAACCAGTGGCTTGAAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGGAAGAAGATGTTGACATAATTATGCATCACTTTCTTGGTTTAATTAACTCATTTTTTCGTAGAAATGAACCTGAGTATCAAACAGAAACTCCTGAACTGAAGAGGAAGAGGTTTAGCCAAACGATTCTTGATGCAGCAAAGCCATTCCTTTCAGCAAGAGCAGATCGATTCATTCTCGAGTTGGAGCTATTTCTTGCTTCAGGTTTGAACATTGAAGCCTATGATTCAGTTTACTTGCAACGGTTGGGTTGGAACAAGCCTATAGTGCCGAGCGTGGCTAACGAAGAAGATCTTGGACTCAAATCTGTAACTCCATACTTGTATATCTTTGATTGTGACCCTGATGATGGTGATTAA

Coding sequence (CDS)

ATGTCGGGAAAGTCCATGGAATTGCAGAGCACTGCATCAATGGAGATGGAGACAAGAACTTCCACTTCGGACTATACGAACCCTTGCCCGATCTGCCTTGGACCCATAAATCAATCTTCCTATCTCGACAAGTGCTTTCATAACTTTTGTTACAATTGCATTGTACAATGGACCAAAGTGGTTTCTGGGAAGCGCTCCTGCACACTTTCCTCCATTAAATGTCCTTTATGCAAGACAGAAAGTTCTTCTATAATACATGGATTAGATGGACACAATTTCCAAAGACATTATGTTAATCCGGATTTCCAGGATAGCTTTATCTTATCAAAAGCTCATAGGTATAGATTACAGTGCTATTATACTGAACCAGGTTTCTTGAATGACATATTTGATGTACAGAGGTATTGGAAGTTACAGAAGTATCTCCAGGCAAACCAGTGGCTTGAAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGGAAGAAGATGTTGACATAATTATGCATCACTTTCTTGGTTTAATTAACTCATTTTTTCGTAGAAATGAACCTGAGTATCAAACAGAAACTCCTGAACTGAAGAGGAAGAGGTTTAGCCAAACGATTCTTGATGCAGCAAAGCCATTCCTTTCAGCAAGAGCAGATCGATTCATTCTCGAGTTGGAGCTATTTCTTGCTTCAGGTTTGAACATTGAAGCCTATGATTCAGTTTACTTGCAACGGTTGGGTTGGAACAAGCCTATAGTGCCGAGCGTGGCTAACGAAGAAGATCTTGGACTCAAATCTGTAACTCCATACTTGTATATCTTTGATTGTGACCCTGATGATGGTGATTAA

Protein sequence

MSGKSMELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKRSCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYYTEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFFRRNEPEYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYLQRLGWNKPIVPSVANEEDLGLKSVTPYLYIFDCDPDDGD

Homology

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BLAST of CsaV3_2G005130 vs. NCBI nr
Match: XP_004139186.2 (PREDICTED: uncharacterized protein LOC101211581 isoform X1 [Cucumis sativus] >KGN60891.1 hypothetical protein Csa_2G021620 [Cucumis sativus])

HSP 1 Score: 582.8 bits (1501), Expect = 6.3e-163
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MSGKSMELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60
           MSGKSMELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV
Sbjct: 1   MSGKSMELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60

Query: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYY 120
           VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYY
Sbjct: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYY 120

Query: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFF 180
           TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFF
Sbjct: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFF 180

Query: 181 RRNEPEYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYL 240
           RRNEPEYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYL
Sbjct: 181 RRNEPEYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWNKPIVPSVANEEDLGLKSVTPYLYIFDCDPDDGD 280
           QRLGWNKPIVPSVANEEDLGLKSVTPYLYIFDCDPDDGD
Sbjct: 241 QRLGWNKPIVPSVANEEDLGLKSVTPYLYIFDCDPDDGD 279

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BLAST of CsaV3_2G005130 vs. NCBI nr
Match: XP_008454833.1 (PREDICTED: uncharacterized protein LOC103495144 [Cucumis melo])

HSP 1 Score: 546.6 bits (1407), Expect = 5.0e-152
Identity = 262/277 (94.58%), Postives = 271/277 (97.83%), Query Frame = 0


Query: 1   MSGKSMELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60
           MS KSMELQS ASME++T TSTSDYT+PCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV
Sbjct: 1   MSEKSMELQSAASMEIKTSTSTSDYTDPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60

Query: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYY 120
           VSGKRSC LSSIKCPLCKTESSSIIHGLDGH+FQRHYVNPDFQDSFILSKAH+YRLQCYY
Sbjct: 61  VSGKRSCRLSSIKCPLCKTESSSIIHGLDGHHFQRHYVNPDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFF 180
           TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHF+GLINSFF
Sbjct: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFVGLINSFF 180

Query: 181 RRNEPEYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYL 240
           RRNEP+YQTETPELKRKRFSQTILDAAKPFLSARADRF+LELELFLASGLNIEAYDSVYL
Sbjct: 181 RRNEPKYQTETPELKRKRFSQTILDAAKPFLSARADRFMLELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWNKPIVPSVANEEDLGLKSVTPYLYIFDCDPDD 278
           QRLGWN+PIV SVANEEDLGLKSVTPYLYIFD DPDD
Sbjct: 241 QRLGWNEPIVLSVANEEDLGLKSVTPYLYIFDNDPDD 277

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BLAST of CsaV3_2G005130 vs. NCBI nr
Match: XP_022150768.1 (uncharacterized protein LOC111018833 [Momordica charantia])

HSP 1 Score: 486.1 bits (1250), Expect = 8.0e-134
Identity = 232/279 (83.15%), Postives = 252/279 (90.32%), Query Frame = 0


Query: 1   MSGKSMELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60
           MS  +MELQSTA  EMET +S+ D TNPCPICLG I + SYLDKCFH FCYNCIVQWTKV
Sbjct: 1   MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV 60

Query: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYY 120
           VSGKRSC LS IKCPLCKTESSSIIHGLDGH FQRHYVN DFQDSFILSKAH+YRLQCYY
Sbjct: 61  VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFF 180
           TEPGFL DIF+VQRYWKL+KYLQANQWLEVWLKRELQALIQEEDVDIIMHH LGLIN FF
Sbjct: 121 TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180

Query: 181 RRNEPEYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYL 240
            RNE +YQTE+PE+K+++FS  + DAAKPFLSARADRF+ ELELFLASGLNIEAYDSVYL
Sbjct: 181 SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWNKPIVPSVANEEDLGLKSVTPYLYIFDCDPDDGD 280
           QRLGW++P+VPSVA +EDLGLK VTPYLYIFD DPDDG+
Sbjct: 241 QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279

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BLAST of CsaV3_2G005130 vs. NCBI nr
Match: XP_022946760.1 (uncharacterized protein LOC111450733 [Cucurbita moschata])

HSP 1 Score: 484.2 bits (1245), Expect = 3.0e-133
Identity = 232/274 (84.67%), Postives = 248/274 (90.51%), Query Frame = 0


Query: 6   MELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKR 65
           MELQ TA +EMET +S+SD TNPCPICLGPI Q SYLDKCFH FCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYYTEPGF 125
           SCTLSSIKCPLCKTES SIIHGLDGH FQRHYVN DFQDSFILSKA +YRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFFRRNEP 185
           L+DIF VQ+YWKL+KYLQANQWLEVWLKRELQALIQEEDVDIIMHH LG I+SFF RNEP
Sbjct: 121 LDDIFSVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 EYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYLQRLGW 245
            YQTETP+LKR+RF+  ILDAAKPFLS RADRF+LELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRERFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 NKPIVPSVANEEDLGLKSVTPYLYIFDCDPDDGD 280
           NKP+ PS+A  EDLG + VTPYL+IFD DPDDGD
Sbjct: 241 NKPVGPSMA-VEDLGHEPVTPYLFIFDYDPDDGD 273

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BLAST of CsaV3_2G005130 vs. NCBI nr
Match: XP_023545827.1 (uncharacterized protein LOC111805146 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 483.4 bits (1243), Expect = 5.2e-133
Identity = 232/274 (84.67%), Postives = 247/274 (90.15%), Query Frame = 0


Query: 6   MELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKR 65
           MELQ TA +EMET +S+SD TNPCPICLGPI Q SYLDKCFH FCYNCIVQWTKVVSGK 
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYYTEPGF 125
           SCTLSSIKCPLCKTES SIIHGLDGH FQRHYVN DFQDSFILSKA +YRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFFRRNEP 185
           L+DIF VQ+YWKL+KYLQANQWLEVWLKRELQALIQEEDVDIIMHH LG I+SFF RNEP
Sbjct: 121 LDDIFSVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 EYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYLQRLGW 245
            YQTETP+LKR RF+  ILDAAKPFLS RADRF+LELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRDRFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 NKPIVPSVANEEDLGLKSVTPYLYIFDCDPDDGD 280
           NKP+ PS+A  EDLG + VTPYL+IFD DPDDGD
Sbjct: 241 NKPVGPSMA-VEDLGHEPVTPYLFIFDYDPDDGD 273

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BLAST of CsaV3_2G005130 vs. TAIR10
Match: AT3G05250.1 (RING/U-box superfamily protein)

HSP 1 Score: 298.1 bits (762), Expect = 5.6e-81
Identity = 144/263 (54.75%), Postives = 189/263 (71.86%), Query Frame = 0


Query: 23  SDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKRSCTLSSIKCPLCKTESS 82
           SD+ +PCPICLG   + SYLD CFH FC+NCI QW KVVS K S   SS+ CPLCKTE+ 
Sbjct: 17  SDF-DPCPICLGQFLRESYLDTCFHKFCFNCIKQWIKVVSSKASKQRSSVTCPLCKTENL 76

Query: 83  SIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYYTEPGFLNDIFDVQRYWKLQKYL 142
           SIIH  DG +F+RHY++P+  D F+L+K  RYRLQCYYTE GFL D+FDV R+WKLQK+L
Sbjct: 77  SIIHNYDGCSFERHYIDPNIPDGFVLTKEQRYRLQCYYTESGFLADVFDVARFWKLQKFL 136

Query: 143 QANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFFRRNEPEYQTETPELK---RKRF 202
           Q N+ LE WL+RELQAL+QEEDVDI++HH +G++ SF +R +   + ET   +   +++F
Sbjct: 137 QPNRCLEAWLRRELQALMQEEDVDIVLHHLVGVMESFCKRIKQRRKQETRSAETTNQEQF 196

Query: 203 SQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYLQRLGWNKPIVPSVANEEDL 262
              + +AA+PF+ AR DRF+ ELELFLA+GLN+EAYD++Y Q L  N       A+EE  
Sbjct: 197 KAVVSEAARPFVMARTDRFVDELELFLAAGLNLEAYDAIYKQGLEGNNRREIGAASEERE 256

Query: 263 GLKS------VTPYLYIFDCDPD 277
            ++       VTPYL+IF+ D D
Sbjct: 257 EVEEHNVRTRVTPYLFIFEEDSD 278

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BLAST of CsaV3_2G005130 vs. TAIR10
Match: AT2G39100.1 (RING/U-box superfamily protein)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08
Identity = 65/266 (24.44%), Postives = 104/266 (39.10%), Query Frame = 0


Query: 29  CPICLGPINQ---SSYLDKCFHNFCYNCIVQWTKVVSGKRSCTLSSIKCPLCKTESSS-- 88
           CPICL  + +   ++ +  C H +C  CI +W+   S KR+       CPLC T   S  
Sbjct: 39  CPICLENLTERRSAAVITVCKHGYCLACIRKWS---SFKRN-------CPLCNTRFDSWF 98

Query: 89  IIHGLDGHNFQR--------------HYVNPDFQDSFI----------LSKAHRYRLQCY 148
           I+       + +              H  NP  +   I           S++     +  
Sbjct: 99  IVSDFASRKYHKEQLPILRDRETLTYHRNNPSDRRRIIQRSRDVLENSSSRSRPLPWRRS 158

Query: 149 YTEPGFLND--IFDVQRYWKLQKY-----------------LQANQW--------LEVWL 208
           +  PG + D  IF  +  W+   Y                 L  N +        +E W+
Sbjct: 159 FGRPGSVPDSVIFQRKLQWRASIYTKQLRAVRLHSRRLELSLAVNDYTKAKITERIEPWI 218

Query: 209 KRELQALIQEEDVDIIMHHFLGLINSFFRRNEPEYQTETPELKRKRFSQTILDAAKPFLS 239
           +RELQA++ + D  +I+H    L   F +R E E   +T +       +  + + + FLS
Sbjct: 219 RRELQAVLGDPDPSVIVHFASAL---FIKRLERENNRQTGQ--TGMLVEDEVSSLRKFLS 278

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BLAST of CsaV3_2G005130 vs. TAIR10
Match: AT3G05670.1 (RING/U-box protein)

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 23/61 (37.70%), Postives = 30/61 (49.18%), Query Frame = 0


Query: 27  NPCPICLGPINQ---SSYLDKCFHNFCYNCIVQWTKVVSGKRSCTLSSIKCPLCKTESSS 85
           N C ICL   +       LD C H FC+ CI++W+KV S          +CPLCK    +
Sbjct: 411 NVCGICLSEEDMRRLKGTLDCCSHYFCFTCIMEWSKVES----------RCPLCKQRFRT 461

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BLAST of CsaV3_2G005130 vs. Swiss-Prot
Match: sp|Q80Z37|TOPRS_MOUSE (E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06
Identity = 26/94 (27.66%), Postives = 43/94 (45.74%), Query Frame = 0


Query: 29  CPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKRSCTLSSIKCPLCKTESSSIIHGL 88
           CPICL   +  SYLD+C H FC+ C+ +W+K          +  +         SI H +
Sbjct: 104 CPICLDRFDNVSYLDRCLHKFCFRCVQEWSK----------NKAEXXXXXXXXXSIFHSV 163

Query: 89  DGH-NFQRHYVNPDFQDSFILSKAHRYRLQCYYT 122
               +F+ + + P +  SF   +  R+R +   T
Sbjct: 164 RAEDDFKEYVLRPSYNGSFTNPEVRRFRYRTTMT 187

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BLAST of CsaV3_2G005130 vs. Swiss-Prot
Match: sp|Q9NS56|TOPRS_HUMAN (E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.5e-06
Identity = 26/89 (29.21%), Postives = 42/89 (47.19%), Query Frame = 0


Query: 29  CPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKRSCTLSSIKCPLCKTESSSIIHGL 88
           CPICL   +  SYLD+C H FC+ C+ +W+K          +  +         SI H +
Sbjct: 103 CPICLDRFDNVSYLDRCLHKFCFRCVQEWSK----------NKAEXXXXXXXXXSIFHSV 162

Query: 89  DGH-NFQRHYVNPDFQDSFIL-SKAHRYR 116
               +F+ + + P +  SF+   +  RYR
Sbjct: 163 RAEDDFKEYVLRPSYNGSFVTPDRRFRYR 181

[Close]

BLAST of CsaV3_2G005130 vs. Swiss-Prot
Match: sp|Q9V8P9|TOPRS_DROME (E3 ubiquitin-protein ligase Topors OS=Drosophila melanogaster OX=7227 GN=Topors PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.8e-05
Identity = 25/80 (31.25%), Postives = 38/80 (47.50%), Query Frame = 0


Query: 10  STASMEMETRTSTSDYTNP-CPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKRSCT 69
           ++AS   E  T   +   P C ICL    +  + D C H FC+ C+ +W+K+        
Sbjct: 82  TSASAAEENGTVERNSPPPNCAICLSRCRRKCFTDSCMHQFCFKCLCEWSKI-------- 141

Query: 70  LSSIKCPLCKTESSSIIHGL 89
               +CPLCK    +IIH +
Sbjct: 142 --KPECPLCKQPFRTIIHNV 151

[Close]

BLAST of CsaV3_2G005130 vs. Swiss-Prot
Match: sp|Q9E1W2|IE61_CHV9D (E3 ubiquitin-protein ligase IE61 OS=Cercopithecine herpesvirus 9 (strain DHV) OX=36348 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.7e-05
Identity = 29/83 (34.94%), Postives = 41/83 (49.40%), Query Frame = 0


Query: 20 TSTSD---YTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKRSCTLSSIKCPL 79
          TSTS     T  C IC+  I+       C H+FC+ CI  WT           +S +CPL
Sbjct: 7  TSTSGSVASTGNCAICMSAISGLGKTLPCLHDFCFVCIQTWTS----------TSAQCPL 66

Query: 80 CKTESSSIIHGLDGH-NFQRHYV 99
          C+T  SSI+H +    N++ + V
Sbjct: 67 CRTVVSSILHNITSDANYEEYEV 79

[Close]

BLAST of CsaV3_2G005130 vs. TrEMBL
Match: tr|A0A0A0LLN5|A0A0A0LLN5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021620 PE=4 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 4.1e-163
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MSGKSMELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60
           MSGKSMELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV
Sbjct: 1   MSGKSMELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60

Query: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYY 120
           VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYY
Sbjct: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYY 120

Query: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFF 180
           TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFF
Sbjct: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFF 180

Query: 181 RRNEPEYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYL 240
           RRNEPEYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYL
Sbjct: 181 RRNEPEYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWNKPIVPSVANEEDLGLKSVTPYLYIFDCDPDDGD 280
           QRLGWNKPIVPSVANEEDLGLKSVTPYLYIFDCDPDDGD
Sbjct: 241 QRLGWNKPIVPSVANEEDLGLKSVTPYLYIFDCDPDDGD 279

[Close]

BLAST of CsaV3_2G005130 vs. TrEMBL
Match: tr|A0A1S3BZL4|A0A1S3BZL4_CUCME (uncharacterized protein LOC103495144 OS=Cucumis melo OX=3656 GN=LOC103495144 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 3.3e-152
Identity = 262/277 (94.58%), Postives = 271/277 (97.83%), Query Frame = 0


Query: 1   MSGKSMELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60
           MS KSMELQS ASME++T TSTSDYT+PCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV
Sbjct: 1   MSEKSMELQSAASMEIKTSTSTSDYTDPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60

Query: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYY 120
           VSGKRSC LSSIKCPLCKTESSSIIHGLDGH+FQRHYVNPDFQDSFILSKAH+YRLQCYY
Sbjct: 61  VSGKRSCRLSSIKCPLCKTESSSIIHGLDGHHFQRHYVNPDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFF 180
           TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHF+GLINSFF
Sbjct: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFVGLINSFF 180

Query: 181 RRNEPEYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYL 240
           RRNEP+YQTETPELKRKRFSQTILDAAKPFLSARADRF+LELELFLASGLNIEAYDSVYL
Sbjct: 181 RRNEPKYQTETPELKRKRFSQTILDAAKPFLSARADRFMLELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWNKPIVPSVANEEDLGLKSVTPYLYIFDCDPDD 278
           QRLGWN+PIV SVANEEDLGLKSVTPYLYIFD DPDD
Sbjct: 241 QRLGWNEPIVLSVANEEDLGLKSVTPYLYIFDNDPDD 277

[Close]

BLAST of CsaV3_2G005130 vs. TrEMBL
Match: tr|Q84KA3|Q84KA3_CUCME (RING zinc finger protein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 6.7e-105
Identity = 198/264 (75.00%), Postives = 205/264 (77.65%), Query Frame = 0


Query: 14  MEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKRSCTLSSIK 73
           ME++T TSTSDYT+PCPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKRSC LSSIK
Sbjct: 1   MEIKTSTSTSDYTDPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKRSCRLSSIK 60

Query: 74  CPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYYTEPGFLNDIFDVQ 133
           CPLCK                                                       
Sbjct: 61  CPLCK------------------------------------------------------- 120

Query: 134 RYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFFRRNEPEYQTETPE 193
           RYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHF+GLINSFFRRNEP+YQTETPE
Sbjct: 121 RYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFVGLINSFFRRNEPKYQTETPE 180

Query: 194 LKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYLQRLGWNKPIVPSV 253
           LKRKRFSQTILDAAKPFLSARADRF+LELELFLASGLNIEAYDSVYLQRLGWN+PIV SV
Sbjct: 181 LKRKRFSQTILDAAKPFLSARADRFMLELELFLASGLNIEAYDSVYLQRLGWNEPIVLSV 209

Query: 254 ANEEDLGLKSVTPYLYIFDCDPDD 278
           ANEEDLGLKSVTPYLYIFD DPDD
Sbjct: 241 ANEEDLGLKSVTPYLYIFDNDPDD 209

[Close]

BLAST of CsaV3_2G005130 vs. TrEMBL
Match: tr|M5WCB8|M5WCB8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G327800 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.0e-96
Identity = 171/265 (64.53%), Postives = 211/265 (79.62%), Query Frame = 0


Query: 13  SMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKRSCTLSSI 72
           ++   T +S+S+ +NPCPICLGPI Q SYLDKCFH FCYNCI++WTKVV+ K+SC  +S+
Sbjct: 5   NVNKNTSSSSSEDSNPCPICLGPIIQDSYLDKCFHKFCYNCILRWTKVVAHKQSCLPTSV 64

Query: 73  KCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYYTEPGFLNDIFDV 132
           KCPLCKTE+ SIIHG DG +FQ+HY+N D    FILSK H+YRLQCYYTEPGFLNDIFDV
Sbjct: 65  KCPLCKTENLSIIHGYDGSSFQKHYINQD--SGFILSKDHKYRLQCYYTEPGFLNDIFDV 124

Query: 133 QRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFFRRNEPEYQTETP 192
            RYWK  KYLQ N+WL+ WL+RE+QAL+QEEDVDIIMHH  GLI+S   R+E + QT+TP
Sbjct: 125 LRYWKSHKYLQPNRWLQSWLRREIQALMQEEDVDIIMHHIHGLIHSSLTRHEQKGQTKTP 184

Query: 193 ELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYLQRLGWNKPIVPS 252
           E K++ F ++I DAA+PFL+AR DRF+ E+ELFLASGLNIEAYD+V +QRLGW+ P V +
Sbjct: 185 EAKQREFQESISDAARPFLAARTDRFVNEVELFLASGLNIEAYDAVCMQRLGWSAPGVTT 244

Query: 253 VANEEDLG-LKSVTPYLYIF---DC 274
              E +L   + V PYLYIF   DC
Sbjct: 245 EPTEGELAEHRPVIPYLYIFYESDC 267

[Close]

BLAST of CsaV3_2G005130 vs. TrEMBL
Match: tr|A0A2I4DVF6|A0A2I4DVF6_9ROSI (uncharacterized protein LOC108983818 isoform X1 OS=Juglans regia OX=51240 GN=LOC108983818 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 2.8e-95
Identity = 168/260 (64.62%), Postives = 205/260 (78.85%), Query Frame = 0


Query: 21  STSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKRSCTLSSIKCPLCKTE 80
           ST D  N CPICLGPI Q SYLDKCFH FCY CIVQWTKVV+GK S  L S+KCPLCKTE
Sbjct: 12  STGD-LNLCPICLGPIVQDSYLDKCFHKFCYTCIVQWTKVVAGKLSRPLPSVKCPLCKTE 71

Query: 81  SSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYYTEPGFLNDIFDVQRYWKLQK 140
           + SIIHG DG++FQ+H++N DF+ SF+L++ H+YRLQCYY+EPG ++DIF+  RYWK +K
Sbjct: 72  NFSIIHGYDGNSFQQHHINQDFEHSFVLTRGHKYRLQCYYSEPGVVSDIFNASRYWKSRK 131

Query: 141 YLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFFRRNEPEYQTETPELKRKRFS 200
           YLQ N+WL+ WL+RE+QAL+QEEDVDII+HH LG+I+SF  RNEP+   + PE K +   
Sbjct: 132 YLQPNRWLQSWLRREIQALMQEEDVDIIVHHILGVIDSFVSRNEPKSHVKIPETKGEELK 191

Query: 201 QTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYLQRLGWNKPIVPSVANEEDL- 260
             + DAA+PFL AR DRFI E+ELFLASGLNIEAYD+VY+QRLGW+ P V S A+E  L 
Sbjct: 192 ALVSDAARPFLGARTDRFINEVELFLASGLNIEAYDAVYMQRLGWSFPGVTSEASEGALS 251

Query: 261 GLKSVTPYLYIFDCDPDDGD 280
           G  +V PYLYIFD D D  D
Sbjct: 252 GQTTVIPYLYIFDADSDGPD 270

The following BLAST results are available for this feature:

BLAST of CsaV3_2G005130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139186.2	6.3e-163	100.00	PREDICTED: uncharacterized protein LOC101211581 isoform X1 [Cucumis sativus] >KG...	[more]
XP_008454833.1	5.0e-152	94.58	PREDICTED: uncharacterized protein LOC103495144 [Cucumis melo]	[more]
XP_022150768.1	8.0e-134	83.15	uncharacterized protein LOC111018833 [Momordica charantia]	[more]
XP_022946760.1	3.0e-133	84.67	uncharacterized protein LOC111450733 [Cucurbita moschata]	[more]
XP_023545827.1	5.2e-133	84.67	uncharacterized protein LOC111805146 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_2G005130 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05250.1	5.6e-81	54.75	RING/U-box superfamily protein	[more]
AT2G39100.1	1.3e-08	24.44	RING/U-box superfamily protein	[more]
AT3G05670.1	1.5e-04	37.70	RING/U-box protein	[more]

BLAST of CsaV3_2G005130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q80Z37\|TOPRS_MOUSE	1.1e-06	27.66	E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1	[more]
sp\|Q9NS56\|TOPRS_HUMAN	2.5e-06	29.21	E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1	[more]
sp\|Q9V8P9\|TOPRS_DROME	2.8e-05	31.25	E3 ubiquitin-protein ligase Topors OS=Drosophila melanogaster OX=7227 GN=Topors ...	[more]
sp\|Q9E1W2\|IE61_CHV9D	3.7e-05	34.94	E3 ubiquitin-protein ligase IE61 OS=Cercopithecine herpesvirus 9 (strain DHV) OX...	[more]

BLAST of CsaV3_2G005130 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LLN5\|A0A0A0LLN5_CUCSA	4.1e-163	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021620 PE=4 SV=1	[more]
tr\|A0A1S3BZL4\|A0A1S3BZL4_CUCME	3.3e-152	94.58	uncharacterized protein LOC103495144 OS=Cucumis melo OX=3656 GN=LOC103495144 PE=...	[more]
tr\|Q84KA3\|Q84KA3_CUCME	6.7e-105	75.00	RING zinc finger protein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4...	[more]
tr\|M5WCB8\|M5WCB8_PRUPE	2.0e-96	64.53	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G327800 PE=4 SV=1	[more]
tr\|A0A2I4DVF6\|A0A2I4DVF6_9ROSI	2.8e-95	64.62	uncharacterized protein LOC108983818 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017907	Znf_RING_CS
IPR018957	Znf_C3HC4_RING-type
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0008152	metabolic process
biological_process	GO:0007165	signal transduction
biological_process	GO:0008299	isoprenoid biosynthetic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006694	steroid biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004496	mevalonate kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G005130.1	CsaV3_2G005130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 29..77 e-value: 7.9E-5 score: 32.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 29..78 score: 11.988
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 23..97 e-value: 1.4E-11 score: 45.5
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 29..77 e-value: 4.7E-8 score: 32.7
None	No IPR available	PANTHER	PTHR22937:SF70	SUBFAMILY NOT NAMED	coord: 10..277
None	No IPR available	PANTHER	PTHR22937	RING FINGER CONTAINING PROTEIN	coord: 10..277
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 25..87
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 45..54

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G005130	CSPI02G03810	Wild cucumber (PI 183967)	cpicucB080
CsaV3_2G005130	Cucsa.091610	Cucumber (Gy14) v1	cgycucB097
CsaV3_2G005130	CmaCh05G011480	Cucurbita maxima (Rimu)	cmacucB0934
CsaV3_2G005130	CmoCh05G011590	Cucurbita moschata (Rifu)	cmocucB0924
CsaV3_2G005130	Cp4.1LG11g09450	Cucurbita pepo (Zucchini)	cpecucB0114
CsaV3_2G005130	CsGy2G003900	Cucumber (Gy14) v2	cgybcucB064
CsaV3_2G005130	Carg12894	Silver-seed gourd	carcucB0940
CsaV3_2G005130	Cla019879	Watermelon (97103) v1	cucwmB159
CsaV3_2G005130	MELO3C004279	Melon (DHL92) v3.5.1	cucmeB141
CsaV3_2G005130	ClCG02G015910	Watermelon (Charleston Gray)	cucwcgB137
CsaV3_2G005130	Lsi11G005300	Bottle gourd (USVL1VR-Ls)	cuclsiB108
CsaV3_2G005130	MELO3C004279.2	Melon (DHL92) v3.6.1	cucmedB134
CsaV3_2G005130	Cla97C02G041680	Watermelon (97103) v2	cucwmbB123
CsaV3_2G005130	Bhi05G001654	Wax gourd	cucwgoB157

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G005130	Silver-seed gourd	carcucB0754
CsaV3_2G005130	Cucurbita maxima (Rimu)	cmacucB0202
CsaV3_2G005130	Cucurbita moschata (Rifu)	cmocucB0185
CsaV3_2G005130	Cucurbita pepo (Zucchini)	cpecucB0010
CsaV3_2G005130	Cucurbita pepo (Zucchini)	cpecucB1014