CsGy5G006210 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAACTCCTTCAACTTCACACCAGGGACCAATCCAGGAAGAGAATCTAGAACAGCAACTGATTCAAACCATAACAACGATCCTCAATGCCACCAAACCATCTCTCAGTGCACTTGCCCCATATGCCGCACATCTTTCTCCTTCCTTGATATCCTCCATTTTCGCCTCCAAAGCTCTAAGTTCTCATCCCTCCGTTCTTTTAAATGTCTTCAAATGGGCTCAGAAACATGTCCCCTCTTTCTCTTCCCCACCCAATAATTCTCTCTCTTCTCTTCTTACCCTCTTACCTTCTCTGTTTCGCCATTACATGTTCTCCGATGCCAAATCCCTCCTTATTTCCTTCATTTCTTCCGATCGCCAACACGAACTCCATAAATTGATTCTCCATCCCACTCGTGATCTTCCCGAGCCGTCCAAAGAGCTACTGGATACCTCCATTGGCGCCTACGTGCAAATGGACCAGCCCCATCTTGCTACTCAGATCTTCAACAAGATGAAGCGGCTTAACTACCGGCCGAATTTGCTTACCTGCAACACATTGATGAATTCCTTGGTAAGATACCCGTCTTCGAGTTCTATTCTATTGGCTAGACAAGTATTAAAGGATTCGATTAAACTCGGCGTGGTACCGAATACTAATAGCTTCAATATTTTGATATATGGGTATTGCTTAGAGAGTAAAGTTAAGGATGCACTGGATTGGGTGAATAAAATGAGTGAGTTTGGTTGTGTACCGGATACTGTGAGTTATAATACGATATTGGATGCATTGTTAAAGAGGAGACTGTTACAAGAGGCCCGGGACTTGCTGTTGGACATGAAAAGTAAAGGGCTGTCGCCAAATAAGCATACGTATAATATGTTGGTTTGTGGATATTGCAGACTGGGGTTACTGAAGGAGGCTACCAAGGTGATCGAAATAATGACGCGTAATAATTTGTTGCCTACTGTTTGGACTTATAATATGTTGGTTAATGGGTTTTGTAATGATGGTAAGATTGATGAGGCTTTTAGGATAAGAGATGAGATGGAGAAAATGAATGTCTTGCCTGACGTGGTTACCTATAACACATTGATTGATGGGTGTTCCCAGTGGCGGGATAGTTCTGAGGTATATAGTTTGATTGAAGAAATGGATAAGAAAGGAGTGAAGTGTAATGCAGTTACTTACAATATAATACTGAAATGGATGTGTAAGAAAGGGAATATGACTGAAGCAACCACTACTCTTGATAAGATGGAAGAAAATGGACTCTCCCCTGATTGTGTGACGTACAATACTCTAATAGGTGCTTATTGTAAGGCTGGAAAAATGGGAAAAGCGTTTAGAATGATGGATGAAATGACTAGTAAAGGTTTGAAAATTGATACTTGGACCTTGAATACGATTCTCCATTGTCTCTGTGTGGAGAAAAAACTTGATGAGGCATACAACTTATTATGCAGTGCTAGTAAGCGGGGCTATATTCTTGATGAGGTTAGCTATGGTATTCTGATTTTGGGTTACTTCAAAGATGAAAAGGGAGACAGAGCCTTGAATCTTTGGGATGAAATGAAGGAAAGACAGATTATGCCAAGCACCATCACCTATAATTCTGTGATTGGAGGACTATGTCAGTCTAGGAAAGTTGATCAAGCTATAGATAAGCTGAATGAGATGCTTGAGAATGGATTAGTTCCTGATGAAACTACTTACAACATAATTATCCATGGCTTTTGTTTGGAAGGGAATGTGGAAAAAGCATTCCAATTCCACAACGAAATGATTGAGAATTTATTCAAGCCAGATGTCTATACTTGTAATATTCTTCTTCGTGGGTTATGCAGAGAGGGTATGCTAGAGAAGGCTCTTAAGCTGTTCAATACTTTGGTTTCTAAAGGCAAAGACATTGATGTAGTTACGTATAATACCATAATATCTAGTCTGTGCAAAGAAGGGAAATTCGAGAATGCTTATGATCTTCTTACTGAAATGGAAGCGAAAAAGTTAGGTCCTGATCAATATACTTACAAAGTGATTATTGCTGCTCTAACAGATGCGGGAAGGATTAAGGAGGCGGAGGAATTTACATTGAAAATGGTTGAATCGGGAATAGTGCATGATCAGAATTTGAAATTGGGCAAAGGGCAGAATGTGCTAACCTCTGAAGTTTCGGAACATTTTGATTTCAAGTCTATAGCTTACTCGGATCAGATCAATGAACTATGTAATCAACATAAGTATAAGGATGCAATGCACCTATTTGTCGAAGTTACAAAGGAAGGTGTTGCTTTAAACAAATACACTTATCTAAATTTGATGGAGGGGCTGATTAAGAGGCGTAAAAGCACATCAAAGGCCAGCCGGTGA ATGGAAACTCCTTCAACTTCACACCAGGGACCAATCCAGGAAGAGAATCTAGAACAGCAACTGATTCAAACCATAACAACGATCCTCAATGCCACCAAACCATCTCTCAGTGCACTTGCCCCATATGCCGCACATCTTTCTCCTTCCTTGATATCCTCCATTTTCGCCTCCAAAGCTCTAAGTTCTCATCCCTCCGTTCTTTTAAATGTCTTCAAATGGGCTCAGAAACATGTCCCCTCTTTCTCTTCCCCACCCAATAATTCTCTCTCTTCTCTTCTTACCCTCTTACCTTCTCTGTTTCGCCATTACATGTTCTCCGATGCCAAATCCCTCCTTATTTCCTTCATTTCTTCCGATCGCCAACACGAACTCCATAAATTGATTCTCCATCCCACTCGTGATCTTCCCGAGCCGTCCAAAGAGCTACTGGATACCTCCATTGGCGCCTACGTGCAAATGGACCAGCCCCATCTTGCTACTCAGATCTTCAACAAGATGAAGCGGCTTAACTACCGGCCGAATTTGCTTACCTGCAACACATTGATGAATTCCTTGGTAAGATACCCGTCTTCGAGTTCTATTCTATTGGCTAGACAAGTATTAAAGGATTCGATTAAACTCGGCGTGGTACCGAATACTAATAGCTTCAATATTTTGATATATGGGTATTGCTTAGAGAGTAAAGTTAAGGATGCACTGGATTGGGTGAATAAAATGAGTGAGTTTGGTTGTGTACCGGATACTGTGAGTTATAATACGATATTGGATGCATTGTTAAAGAGGAGACTGTTACAAGAGGCCCGGGACTTGCTGTTGGACATGAAAAGTAAAGGGCTGTCGCCAAATAAGCATACGTATAATATGTTGGTTTGTGGATATTGCAGACTGGGGTTACTGAAGGAGGCTACCAAGGTGATCGAAATAATGACGCGTAATAATTTGTTGCCTACTGTTTGGACTTATAATATGTTGGTTAATGGGTTTTGTAATGATGGTAAGATTGATGAGGCTTTTAGGATAAGAGATGAGATGGAGAAAATGAATGTCTTGCCTGACGTGGTTACCTATAACACATTGATTGATGGGTGTTCCCAGTGGCGGGATAGTTCTGAGGTATATAGTTTGATTGAAGAAATGGATAAGAAAGGAGTGAAGTGTAATGCAGTTACTTACAATATAATACTGAAATGGATGTGTAAGAAAGGGAATATGACTGAAGCAACCACTACTCTTGATAAGATGGAAGAAAATGGACTCTCCCCTGATTGTGTGACGTACAATACTCTAATAGGTGCTTATTGTAAGGCTGGAAAAATGGGAAAAGCGTTTAGAATGATGGATGAAATGACTAGTAAAGGTTTGAAAATTGATACTTGGACCTTGAATACGATTCTCCATTGTCTCTGTGTGGAGAAAAAACTTGATGAGGCATACAACTTATTATGCAGTGCTAGTAAGCGGGGCTATATTCTTGATGAGGTTAGCTATGGTATTCTGATTTTGGGTTACTTCAAAGATGAAAAGGGAGACAGAGCCTTGAATCTTTGGGATGAAATGAAGGAAAGACAGATTATGCCAAGCACCATCACCTATAATTCTGTGATTGGAGGACTATGTCAGTCTAGGAAAGTTGATCAAGCTATAGATAAGCTGAATGAGATGCTTGAGAATGGATTAGTTCCTGATGAAACTACTTACAACATAATTATCCATGGCTTTTGTTTGGAAGGGAATGTGGAAAAAGCATTCCAATTCCACAACGAAATGATTGAGAATTTATTCAAGCCAGATGTCTATACTTGTAATATTCTTCTTCGTGGGTTATGCAGAGAGGGTATGCTAGAGAAGGCTCTTAAGCTGTTCAATACTTTGGTTTCTAAAGGCAAAGACATTGATGTAGTTACGTATAATACCATAATATCTAGTCTGTGCAAAGAAGGGAAATTCGAGAATGCTTATGATCTTCTTACTGAAATGGAAGCGAAAAAGTTAGGTCCTGATCAATATACTTACAAAGTGATTATTGCTGCTCTAACAGATGCGGGAAGGATTAAGGAGGCGGAGGAATTTACATTGAAAATGGTTGAATCGGGAATAGTGCATGATCAGAATTTGAAATTGGGCAAAGGGCAGAATGTGCTAACCTCTGAAGTTTCGGAACATTTTGATTTCAAGTCTATAGCTTACTCGGATCAGATCAATGAACTATGTAATCAACATAAGTATAAGGATGCAATGCACCTATTTGTCGAAGTTACAAAGGAAGGTGTTGCTTTAAACAAATACACTTATCTAAATTTGATGGAGGGGCTGATTAAGAGGCGTAAAAGCACATCAAAGGCCAGCCGGTGA ATGGAAACTCCTTCAACTTCACACCAGGGACCAATCCAGGAAGAGAATCTAGAACAGCAACTGATTCAAACCATAACAACGATCCTCAATGCCACCAAACCATCTCTCAGTGCACTTGCCCCATATGCCGCACATCTTTCTCCTTCCTTGATATCCTCCATTTTCGCCTCCAAAGCTCTAAGTTCTCATCCCTCCGTTCTTTTAAATGTCTTCAAATGGGCTCAGAAACATGTCCCCTCTTTCTCTTCCCCACCCAATAATTCTCTCTCTTCTCTTCTTACCCTCTTACCTTCTCTGTTTCGCCATTACATGTTCTCCGATGCCAAATCCCTCCTTATTTCCTTCATTTCTTCCGATCGCCAACACGAACTCCATAAATTGATTCTCCATCCCACTCGTGATCTTCCCGAGCCGTCCAAAGAGCTACTGGATACCTCCATTGGCGCCTACGTGCAAATGGACCAGCCCCATCTTGCTACTCAGATCTTCAACAAGATGAAGCGGCTTAACTACCGGCCGAATTTGCTTACCTGCAACACATTGATGAATTCCTTGGTAAGATACCCGTCTTCGAGTTCTATTCTATTGGCTAGACAAGTATTAAAGGATTCGATTAAACTCGGCGTGGTACCGAATACTAATAGCTTCAATATTTTGATATATGGGTATTGCTTAGAGAGTAAAGTTAAGGATGCACTGGATTGGGTGAATAAAATGAGTGAGTTTGGTTGTGTACCGGATACTGTGAGTTATAATACGATATTGGATGCATTGTTAAAGAGGAGACTGTTACAAGAGGCCCGGGACTTGCTGTTGGACATGAAAAGTAAAGGGCTGTCGCCAAATAAGCATACGTATAATATGTTGGTTTGTGGATATTGCAGACTGGGGTTACTGAAGGAGGCTACCAAGGTGATCGAAATAATGACGCGTAATAATTTGTTGCCTACTGTTTGGACTTATAATATGTTGGTTAATGGGTTTTGTAATGATGGTAAGATTGATGAGGCTTTTAGGATAAGAGATGAGATGGAGAAAATGAATGTCTTGCCTGACGTGGTTACCTATAACACATTGATTGATGGGTGTTCCCAGTGGCGGGATAGTTCTGAGGTATATAGTTTGATTGAAGAAATGGATAAGAAAGGAGTGAAGTGTAATGCAGTTACTTACAATATAATACTGAAATGGATGTGTAAGAAAGGGAATATGACTGAAGCAACCACTACTCTTGATAAGATGGAAGAAAATGGACTCTCCCCTGATTGTGTGACGTACAATACTCTAATAGGTGCTTATTGTAAGGCTGGAAAAATGGGAAAAGCGTTTAGAATGATGGATGAAATGACTAGTAAAGGTTTGAAAATTGATACTTGGACCTTGAATACGATTCTCCATTGTCTCTGTGTGGAGAAAAAACTTGATGAGGCATACAACTTATTATGCAGTGCTAGTAAGCGGGGCTATATTCTTGATGAGGTTAGCTATGGTATTCTGATTTTGGGTTACTTCAAAGATGAAAAGGGAGACAGAGCCTTGAATCTTTGGGATGAAATGAAGGAAAGACAGATTATGCCAAGCACCATCACCTATAATTCTGTGATTGGAGGACTATGTCAGTCTAGGAAAGTTGATCAAGCTATAGATAAGCTGAATGAGATGCTTGAGAATGGATTAGTTCCTGATGAAACTACTTACAACATAATTATCCATGGCTTTTGTTTGGAAGGGAATGTGGAAAAAGCATTCCAATTCCACAACGAAATGATTGAGAATTTATTCAAGCCAGATGTCTATACTTGTAATATTCTTCTTCGTGGGTTATGCAGAGAGGGTATGCTAGAGAAGGCTCTTAAGCTGTTCAATACTTTGGTTTCTAAAGGCAAAGACATTGATGTAGTTACGTATAATACCATAATATCTAGTCTGTGCAAAGAAGGGAAATTCGAGAATGCTTATGATCTTCTTACTGAAATGGAAGCGAAAAAGTTAGGTCCTGATCAATATACTTACAAAGTGATTATTGCTGCTCTAACAGATGCGGGAAGGATTAAGGAGGCGGAGGAATTTACATTGAAAATGGTTGAATCGGGAATAGTGCATGATCAGAATTTGAAATTGGGCAAAGGGCAGAATGTGCTAACCTCTGAAGTTTCGGAACATTTTGATTTCAAGTCTATAGCTTACTCGGATCAGATCAATGAACTATGTAATCAACATAAGTATAAGGATGCAATGCACCTATTTGTCGAAGTTACAAAGGAAGGTGTTGCTTTAAACAAATACACTTATCTAAATTTGATGGAGGGGCTGATTAAGAGGCGTAAAAGCACATCAAAGGCCAGCCGGTGA METPSTSHQGPIQEENLEQQLIQTITTILNATKPSLSALAPYAAHLSPSLISSIFASKALSSHPSVLLNVFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFRHYMFSDAKSLLISFISSDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKSTSKASR
BLAST of CsGy5G006210 vs. NCBI nr
Match: XP_004143692.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g16880 [Cucumis sativus]) HSP 1 Score: 461.5 bits (1186), Expect = 5.9e-126 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of CsGy5G006210 vs. NCBI nr
Match: XP_008445857.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g16880 [Cucumis melo] >XP_008445858.1 PREDICTED: pentatricopeptide repeat-containing protein At2g16880 [Cucumis melo]) HSP 1 Score: 408.3 bits (1048), Expect = 5.9e-110 Identity = 212/234 (90.60%), Postives = 223/234 (95.30%), Query Frame = 0
BLAST of CsGy5G006210 vs. NCBI nr
Match: XP_023525433.1 (pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525440.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525450.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525458.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 367.5 bits (942), Expect = 1.2e-97 Identity = 189/238 (79.41%), Postives = 211/238 (88.66%), Query Frame = 0
BLAST of CsGy5G006210 vs. NCBI nr
Match: XP_022942538.1 (pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942539.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942540.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942542.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata]) HSP 1 Score: 366.3 bits (939), Expect = 2.6e-97 Identity = 189/238 (79.41%), Postives = 210/238 (88.24%), Query Frame = 0
BLAST of CsGy5G006210 vs. NCBI nr
Match: XP_022983777.1 (pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983785.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983794.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983803.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983811.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima]) HSP 1 Score: 365.5 bits (937), Expect = 4.4e-97 Identity = 189/238 (79.41%), Postives = 209/238 (87.82%), Query Frame = 0
BLAST of CsGy5G006210 vs. TAIR10
Match: AT2G16880.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 180.3 bits (456), Expect = 4.7e-45 Identity = 101/224 (45.09%), Postives = 148/224 (66.07%), Query Frame = 0
BLAST of CsGy5G006210 vs. TAIR10
Match: AT5G25630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 46.2 bits (108), Expect = 1.1e-04 Identity = 30/94 (31.91%), Postives = 47/94 (50.00%), Query Frame = 0
BLAST of CsGy5G006210 vs. Swiss-Prot
Match: sp|Q9ZVX5|PP156_ARATH (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX=3702 GN=At2g16880 PE=2 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 8.5e-44 Identity = 101/224 (45.09%), Postives = 148/224 (66.07%), Query Frame = 0
BLAST of CsGy5G006210 vs. TrEMBL
Match: tr|A0A1S3BD66|A0A1S3BD66_CUCME (pentatricopeptide repeat-containing protein At2g16880 OS=Cucumis melo OX=3656 GN=LOC103488749 PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 3.9e-110 Identity = 212/234 (90.60%), Postives = 223/234 (95.30%), Query Frame = 0
BLAST of CsGy5G006210 vs. TrEMBL
Match: tr|A0A0A0KLC8|A0A0A0KLC8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175880 PE=4 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 3.5e-95 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0
BLAST of CsGy5G006210 vs. TrEMBL
Match: tr|A0A2N9IKA1|A0A2N9IKA1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52345 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 3.8e-65 Identity = 132/219 (60.27%), Postives = 170/219 (77.63%), Query Frame = 0
BLAST of CsGy5G006210 vs. TrEMBL
Match: tr|A0A2I4FAP2|A0A2I4FAP2_9ROSI (pentatricopeptide repeat-containing protein At2g16880 OS=Juglans regia OX=51240 GN=LOC108997070 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 7.2e-64 Identity = 130/226 (57.52%), Postives = 171/226 (75.66%), Query Frame = 0
BLAST of CsGy5G006210 vs. TrEMBL
Match: tr|A0A2P4K7P8|A0A2P4K7P8_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_60436 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.0e-62 Identity = 134/219 (61.19%), Postives = 162/219 (73.97%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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