MELO3C011729.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C011729.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr10 : 5395508 .. 5397859 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACTCCTTCAACTTCATATAAGGGACCAACCCAGCAAGAGAATCAAGAACAGCAACTGATTCAAACCATAACAACGATCCTCAGTTCCACCAAACCGTCTTTCAGTGCACTTGCGCCATATGCCGCACATCTTTCTCCTTCCTTGATATCCTCCATTTTCGCCTCCGAAGCTCTAAGTTCTCGTCCCTCCGTTCTTATACATGTCTTCAAATGGGCTCAGAAACATGTCCCCTCTTTCTCTTCCCCACCCATTAATTCTCTATCTTCTCTTCTTACCCTCTTACCTTCTCTGTTTCGCCATTACATGTTCTACGATGCCAAATCCCTCCTTATTTCCTTCATTTCTTCCGATCGCCAACACGAACTCCATAAATTGATTCTCCATCCCACTCGTGATCTTCCCGAGCCGTCCAAAGCTCTTATGGATACCTCCATTGGCGCCTATGTTCAAATGCGCCAGCCCCATCTTGCTACTCAGATCTTCAACAAGATGAAGCGGCTTAACTACCGGCCGAATTTGCTTACCTGCAAAACATTGATGAATTCCTTGGTAAGATACCCGTCTTCGAGTTCTATTCTGTTGGCTAGACAAGTATTTAAGGATTCGATTAAACTCGGCGTGGTACCGGATACTAATAGCGTCAATATTTTGATATATGGGTATTGCTTAGAGAGTAAAGTTAAGGATGCACTGGATTTGGTGAATAAAATGAGTGAGTTTGGTTGTGTACCGGATACTGTGAGTTATAATACGATATTGGATGCATTGTTTAAGAAGAGGCTATTACATGAGGCCCGGGACTTGCTGTTGGACATGACAAATAAAGGGTTGTTGCCAAATAAGCGTACGTATAATATTTTGGTTTGGGGATATTGCAGACTGGGGTTGCTGAAGGAGGCTACCAAGGTGATCGAAATAATGACACATAAAAATTTGTTGCCTAATATTTGGACTTATAATATATTGATTAATGGGTTTTGTAATGATGGTAAGATTGATGAGGCTTTTAGGCTAAGAGATGAAATGGAGAAAATGAAAGTGTTGCCTGACGTGGTTACCTATAACACATTGATTGATGGGTGTTCCGAGCGGCGGGGTAGTTCTGAGGTATATAGTTTGATTGAAGAAATGGATAAAAAAGGAGTGAAGTGTAATGCAGTTACTTATAATATAATATTGAAATGGATGTGTAAGAAAGAAAATATGACTGAAGCAACCACCACTCTTCAGAAGATGGAAGAAAATGGACTCTCCCCTGATTGCGTGACGTACAATACTCTAATAGCTGGTTATTGTAAAGCTGGAAAAATGGGAGAAGCGTTTAGAATGATGGATGAAATGATTAGTAAAGGTTTGAAAATTGATACTTGGACCCTGAATACTATTCTCCATTCTCTCTGTGTGGAGAAAAAACTTGATGAGGCATACAACTTATTATGCAGTGCTAGTAAGCGGGGCTATATTCTTGATGAGGTTAGCTATGGTATTCTGATTATGGGTCACTTCAAAGATGAAAAGGGAGACAGAGCCTTAAATCTTTGGGATGAAATGAAGGAAAGACAGATTATTCCAAGCACCATCACCTATAATTCTGTGATCAGAGGACTATGTCAGTCTACAAAAACTGATCAAGCTACAGATAAGCTGAATGAGATGCTTGAGAATGGAATAGTTCCTGATGAAACTACTTACAACATAATTATCCATGGCTATTGTTTGGAAGGGAATGTGGAAAAAGCATTCCAATTCCACAACAAGATGATTGAGAATTTATTCAAGCCAGATGTCTATACTCGTAATATTCTTCTTCGTGGGTTATGCAGAGAGGGTATGCTAGAGAAGGCTCTTAAGCTGTTCAATACTTGGGTTTCTGATGGCAAAGGCGTTGATGTAGTTACCTATAATACCATAATATCTAGTCTGTGCAAAGAAGGGAAATTCGAGAATGCTTATGATCTTCTTACTGAAATGGAAGCAAAAAAGTTAGGGCCCGATCAATATACTTACAAAACGATTATTGCTGCTCTAACAGATGCGGGAAGGATTGAAGAGGCAGAGGAATTTATATTGAAAATGGTCGAATCGGGAATAGTGCATGATCAGAATTTGAAATTGGGCAAAGGGCAGAATGTGCTAACCTCTGAAGTTTCGGAACACTTTGATTCCAAGTCTATAGCATACTCGGATCAGATCAATGAACTATGTAATCAACATAAGTATAAGGATGCAATGCACCTATTTGTTGAAGTTACAAAGGAAGGCGTTGCTTTAAACAAATATACTTATCTAAGTTTGATGGAGGGGCTGATTAAGAGGCGTAAAAGCACATCAAAGGCCAGCCGGTGA

mRNA sequence

ATGAAAACTCCTTCAACTTCATATAAGGGACCAACCCAGCAAGAGAATCAAGAACAGCAACTGATTCAAACCATAACAACGATCCTCAGTTCCACCAAACCGTCTTTCAGTGCACTTGCGCCATATGCCGCACATCTTTCTCCTTCCTTGATATCCTCCATTTTCGCCTCCGAAGCTCTAAGTTCTCGTCCCTCCGTTCTTATACATGTCTTCAAATGGGCTCAGAAACATGTCCCCTCTTTCTCTTCCCCACCCATTAATTCTCTATCTTCTCTTCTTACCCTCTTACCTTCTCTGTTTCGCCATTACATGTTCTACGATGCCAAATCCCTCCTTATTTCCTTCATTTCTTCCGATCGCCAACACGAACTCCATAAATTGATTCTCCATCCCACTCGTGATCTTCCCGAGCCGTCCAAAGCTCTTATGGATACCTCCATTGGCGCCTATGTTCAAATGCGCCAGCCCCATCTTGCTACTCAGATCTTCAACAAGATGAAGCGGCTTAACTACCGGCCGAATTTGCTTACCTGCAAAACATTGATGAATTCCTTGGTAAGATACCCGTCTTCGAGTTCTATTCTGTTGGCTAGACAAGTATTTAAGGATTCGATTAAACTCGGCGTGGTACCGGATACTAATAGCGTCAATATTTTGATATATGGGTATTGCTTAGAGAGTAAAGTTAAGGATGCACTGGATTTGGTGAATAAAATGAGTGAGTTTGGTTGTGTACCGGATACTGTGAGTTATAATACGATATTGGATGCATTGTTTAAGAAGAGGCTATTACATGAGGCCCGGGACTTGCTGTTGGACATGACAAATAAAGGGTTGTTGCCAAATAAGCGTACGTATAATATTTTGGTTTGGGGATATTGCAGACTGGGGTTGCTGAAGGAGGCTACCAAGGTGATCGAAATAATGACACATAAAAATTTGTTGCCTAATATTTGGACTTATAATATATTGATTAATGGGTTTTGTAATGATGGTAAGATTGATGAGGCTTTTAGGCTAAGAGATGAAATGGAGAAAATGAAAGTGTTGCCTGACGTGGTTACCTATAACACATTGATTGATGGGTGTTCCGAGCGGCGGGGTAGTTCTGAGGTATATAGTTTGATTGAAGAAATGGATAAAAAAGGAGTGAAGTGTAATGCAGTTACTTATAATATAATATTGAAATGGATGTGTAAGAAAGAAAATATGACTGAAGCAACCACCACTCTTCAGAAGATGGAAGAAAATGGACTCTCCCCTGATTGCGTGACGTACAATACTCTAATAGCTGGTTATTGTAAAGCTGGAAAAATGGGAGAAGCGTTTAGAATGATGGATGAAATGATTAGTAAAGGTTTGAAAATTGATACTTGGACCCTGAATACTATTCTCCATTCTCTCTGTGTGGAGAAAAAACTTGATGAGGCATACAACTTATTATGCAGTGCTAGTAAGCGGGGCTATATTCTTGATGAGGTTAGCTATGGTATTCTGATTATGGGTCACTTCAAAGATGAAAAGGGAGACAGAGCCTTAAATCTTTGGGATGAAATGAAGGAAAGACAGATTATTCCAAGCACCATCACCTATAATTCTGTGATCAGAGGACTATGTCAGTCTACAAAAACTGATCAAGCTACAGATAAGCTGAATGAGATGCTTGAGAATGGAATAGTTCCTGATGAAACTACTTACAACATAATTATCCATGGCTATTGTTTGGAAGGGAATGTGGAAAAAGCATTCCAATTCCACAACAAGATGATTGAGAATTTATTCAAGCCAGATGTCTATACTCGTAATATTCTTCTTCGTGGGTTATGCAGAGAGGGTATGCTAGAGAAGGCTCTTAAGCTGTTCAATACTTGGGTTTCTGATGGCAAAGGCGTTGATGTAGTTACCTATAATACCATAATATCTAGTCTGTGCAAAGAAGGGAAATTCGAGAATGCTTATGATCTTCTTACTGAAATGGAAGCAAAAAAGTTAGGGCCCGATCAATATACTTACAAAACGATTATTGCTGCTCTAACAGATGCGGGAAGGATTGAAGAGGCAGAGGAATTTATATTGAAAATGGTCGAATCGGGAATAGTGCATGATCAGAATTTGAAATTGGGCAAAGGGCAGAATGTGCTAACCTCTGAAGTTTCGGAACACTTTGATTCCAAGTCTATAGCATACTCGGATCAGATCAATGAACTATGTAATCAACATAAGTATAAGGATGCAATGCACCTATTTGTTGAAGTTACAAAGGAAGGCGTTGCTTTAAACAAATATACTTATCTAAGTTTGATGGAGGGGCTGATTAAGAGGCGTAAAAGCACATCAAAGGCCAGCCGGTGA

Coding sequence (CDS)

ATGAAAACTCCTTCAACTTCATATAAGGGACCAACCCAGCAAGAGAATCAAGAACAGCAACTGATTCAAACCATAACAACGATCCTCAGTTCCACCAAACCGTCTTTCAGTGCACTTGCGCCATATGCCGCACATCTTTCTCCTTCCTTGATATCCTCCATTTTCGCCTCCGAAGCTCTAAGTTCTCGTCCCTCCGTTCTTATACATGTCTTCAAATGGGCTCAGAAACATGTCCCCTCTTTCTCTTCCCCACCCATTAATTCTCTATCTTCTCTTCTTACCCTCTTACCTTCTCTGTTTCGCCATTACATGTTCTACGATGCCAAATCCCTCCTTATTTCCTTCATTTCTTCCGATCGCCAACACGAACTCCATAAATTGATTCTCCATCCCACTCGTGATCTTCCCGAGCCGTCCAAAGCTCTTATGGATACCTCCATTGGCGCCTATGTTCAAATGCGCCAGCCCCATCTTGCTACTCAGATCTTCAACAAGATGAAGCGGCTTAACTACCGGCCGAATTTGCTTACCTGCAAAACATTGATGAATTCCTTGGTAAGATACCCGTCTTCGAGTTCTATTCTGTTGGCTAGACAAGTATTTAAGGATTCGATTAAACTCGGCGTGGTACCGGATACTAATAGCGTCAATATTTTGATATATGGGTATTGCTTAGAGAGTAAAGTTAAGGATGCACTGGATTTGGTGAATAAAATGAGTGAGTTTGGTTGTGTACCGGATACTGTGAGTTATAATACGATATTGGATGCATTGTTTAAGAAGAGGCTATTACATGAGGCCCGGGACTTGCTGTTGGACATGACAAATAAAGGGTTGTTGCCAAATAAGCGTACGTATAATATTTTGGTTTGGGGATATTGCAGACTGGGGTTGCTGAAGGAGGCTACCAAGGTGATCGAAATAATGACACATAAAAATTTGTTGCCTAATATTTGGACTTATAATATATTGATTAATGGGTTTTGTAATGATGGTAAGATTGATGAGGCTTTTAGGCTAAGAGATGAAATGGAGAAAATGAAAGTGTTGCCTGACGTGGTTACCTATAACACATTGATTGATGGGTGTTCCGAGCGGCGGGGTAGTTCTGAGGTATATAGTTTGATTGAAGAAATGGATAAAAAAGGAGTGAAGTGTAATGCAGTTACTTATAATATAATATTGAAATGGATGTGTAAGAAAGAAAATATGACTGAAGCAACCACCACTCTTCAGAAGATGGAAGAAAATGGACTCTCCCCTGATTGCGTGACGTACAATACTCTAATAGCTGGTTATTGTAAAGCTGGAAAAATGGGAGAAGCGTTTAGAATGATGGATGAAATGATTAGTAAAGGTTTGAAAATTGATACTTGGACCCTGAATACTATTCTCCATTCTCTCTGTGTGGAGAAAAAACTTGATGAGGCATACAACTTATTATGCAGTGCTAGTAAGCGGGGCTATATTCTTGATGAGGTTAGCTATGGTATTCTGATTATGGGTCACTTCAAAGATGAAAAGGGAGACAGAGCCTTAAATCTTTGGGATGAAATGAAGGAAAGACAGATTATTCCAAGCACCATCACCTATAATTCTGTGATCAGAGGACTATGTCAGTCTACAAAAACTGATCAAGCTACAGATAAGCTGAATGAGATGCTTGAGAATGGAATAGTTCCTGATGAAACTACTTACAACATAATTATCCATGGCTATTGTTTGGAAGGGAATGTGGAAAAAGCATTCCAATTCCACAACAAGATGATTGAGAATTTATTCAAGCCAGATGTCTATACTCGTAATATTCTTCTTCGTGGGTTATGCAGAGAGGGTATGCTAGAGAAGGCTCTTAAGCTGTTCAATACTTGGGTTTCTGATGGCAAAGGCGTTGATGTAGTTACCTATAATACCATAATATCTAGTCTGTGCAAAGAAGGGAAATTCGAGAATGCTTATGATCTTCTTACTGAAATGGAAGCAAAAAAGTTAGGGCCCGATCAATATACTTACAAAACGATTATTGCTGCTCTAACAGATGCGGGAAGGATTGAAGAGGCAGAGGAATTTATATTGAAAATGGTCGAATCGGGAATAGTGCATGATCAGAATTTGAAATTGGGCAAAGGGCAGAATGTGCTAACCTCTGAAGTTTCGGAACACTTTGATTCCAAGTCTATAGCATACTCGGATCAGATCAATGAACTATGTAATCAACATAAGTATAAGGATGCAATGCACCTATTTGTTGAAGTTACAAAGGAAGGCGTTGCTTTAAACAAATATACTTATCTAAGTTTGATGGAGGGGCTGATTAAGAGGCGTAAAAGCACATCAAAGGCCAGCCGGTGA

Protein sequence

MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEALSSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDRQHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKTLMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDLVNKMSEFGCVPDTVSYNTILDALFKKRLLHEARDLLLDMTNKGLLPNKRTYNILVWGYCRLGLLKEATKVIEIMTHKNLLPNIWTYNILINGFCNDGKIDEAFRLRDEMEKMKVLPDVVTYNTLIDGCSERRGSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKENMTEATTTLQKMEENGLSPDCVTYNTLIAGYCKAGKMGEAFRMMDEMISKGLKIDTWTLNTILHSLCVEKKLDEAYNLLCSASKRGYILDEVSYGILIMGHFKDEKGDRALNLWDEMKERQIIPSTITYNSVIRGLCQSTKTDQATDKLNEMLENGIVPDETTYNIIIHGYCLEGNVEKAFQFHNKMIENLFKPDVYTRNILLRGLCREGMLEKALKLFNTWVSDGKGVDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKTIIAALTDAGRIEEAEEFILKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDSKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLSLMEGLIKRRKSTSKASR
Homology
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BLAST of MELO3C011729.2 vs. NCBI nr
Match: XP_008445857.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g16880 [Cucumis melo] >XP_008445858.1 PREDICTED: pentatricopeptide repeat-containing protein At2g16880 [Cucumis melo])

HSP 1 Score: 451.4 bits (1160), Expect = 6.1e-123
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0 

Query: 1   MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL 60
           MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL
Sbjct: 1   MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL 60

Query: 61  SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR 120
           SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR
Sbjct: 61  SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR 120

Query: 121 QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT 180
           QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT
Sbjct: 121 QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT 180

Query: 181 LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL 236
           LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL
Sbjct: 181 LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL 235

[Close]
BLAST of MELO3C011729.2 vs. NCBI nr
Match: XP_004143692.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g16880 [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 1.0e-109
Identity = 212/234 (90.60%), Postives = 223/234 (95.30%), Query Frame = 0 

Query: 1   MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL 60
           M+TPSTS++GP Q+EN EQQLIQTITTIL++TKPS SALAPYAAHLSPSLISSIFAS+AL
Sbjct: 1   METPSTSHQGPIQEENLEQQLIQTITTILNATKPSLSALAPYAAHLSPSLISSIFASKAL 60

Query: 61  SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR 120
           SS PSVL++VFKWAQKHVPSFSSPP NSLSSLLTLLPSLFRHYMF DAKSLLISFISSDR
Sbjct: 61  SSHPSVLLNVFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFRHYMFSDAKSLLISFISSDR 120

Query: 121 QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT 180
           QHELHKLILHPTRDLPEPSK L+DTSIGAYVQM QPHLATQIFNKMKRLNYRPNLLTC T
Sbjct: 121 QHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNT 180

Query: 181 LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALD 235
           LMNSLVRYPSSSSILLARQV KDSIKLGVVP+TNS NILIYGYCLESKVKDALD
Sbjct: 181 LMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALD 234

[Close]
BLAST of MELO3C011729.2 vs. NCBI nr
Match: XP_023525433.1 (pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525440.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525450.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525458.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 346.3 bits (887), Expect = 2.8e-91
Identity = 180/235 (76.60%), Postives = 205/235 (87.23%), Query Frame = 0 

Query: 1   MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL 60
           M+TPS + + P+       +LIQTITTIL+STK   +ALAPYAAHLSPSL+SSI +S+AL
Sbjct: 1   METPSITNQRPS-------ELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60

Query: 61  SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR 120
           SS P++L+ +FKWAQKHVPSFSSPP NSLSSL T+LPSLF H  F DAKSLL+SFI++DR
Sbjct: 61  SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDR 120

Query: 121 QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT 180
           QHELHKLILHPTRDLP PSKALMDTSIGAYVQM +PHLA QIF KMKRLNYRPNLLTC T
Sbjct: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180

Query: 181 LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL 236
           L+NSLVRYPSS+SILL+R+VFKDS+KLGVV +TNS NILIYGYCLESK KDALDL
Sbjct: 181 LLNSLVRYPSSNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDL 228

[Close]
BLAST of MELO3C011729.2 vs. NCBI nr
Match: XP_022942538.1 (pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942539.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942540.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942542.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata])

HSP 1 Score: 345.1 bits (884), Expect = 6.1e-91
Identity = 180/235 (76.60%), Postives = 204/235 (86.81%), Query Frame = 0 

Query: 1   MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL 60
           M+TPS S + P+       +LIQTITTIL+STK   +ALAPYAAHLSPSL+SSI +S+AL
Sbjct: 1   METPSISNQRPS-------ELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60

Query: 61  SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR 120
           SS P++L+ +FKWAQKHVPSFSSPP NSLSSL T+LPSLF H  F DAKSLL+SFI++DR
Sbjct: 61  SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDR 120

Query: 121 QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT 180
           QHELHKLILHPTRDLP PSKALMDTSIGAYVQM +PHLA QIF KMKRLNYRPNLLTC T
Sbjct: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180

Query: 181 LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL 236
           L+NSLVRYPS +SILL+R+VFKDS+KLGVV +TNS NILIYGYCLESK KDALDL
Sbjct: 181 LLNSLVRYPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDL 228

[Close]
BLAST of MELO3C011729.2 vs. NCBI nr
Match: XP_022139038.1 (pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_022139039.1 pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_022139040.1 pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_022139041.1 pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia])

HSP 1 Score: 344.4 bits (882), Expect = 1.0e-90
Identity = 179/235 (76.17%), Postives = 204/235 (86.81%), Query Frame = 0 

Query: 1   MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL 60
           M+TP+T  +    QEN+ ++LIQTITTIL+S++   SAL PYAAHLSPSLI SIF+S  L
Sbjct: 1   METPTTPNQRLMPQENRPEELIQTITTILTSSRAPLSALGPYAAHLSPSLICSIFSSRVL 60

Query: 61  SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR 120
           +SRPSVL+  FKWAQKHVP+FSSPP NSL+SLLTLLPSLF H  F DAKSLL+SFI+SDR
Sbjct: 61  NSRPSVLLSFFKWAQKHVPAFSSPPNNSLTSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120

Query: 121 QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT 180
           QH LH+LILHP+R LP PSKALMDTSIGAYVQM +PHLA QIF KMKRLNYR NLLTC T
Sbjct: 121 QHNLHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRLNLLTCNT 180

Query: 181 LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL 236
           L+NSLVRYPSS+SILL+R+VFKDSIKLGVVP+TNS NILIYGYCLES+ KDALDL
Sbjct: 181 LLNSLVRYPSSNSILLSREVFKDSIKLGVVPNTNSFNILIYGYCLESRFKDALDL 235

[Close]
BLAST of MELO3C011729.2 vs. TAIR10
Match: AT2G16880.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 178.3 bits (451), Expect = 1.8e-44
Identity = 101/221 (45.70%), Postives = 146/221 (66.06%), Query Frame = 0 

Query: 18  EQQLIQTITTILSSTKPSF-SALAPYAAHLSPSLISSIFASEALSSRPSVLIHVFKWAQK 77
           E QL++T+T+IL+S K  F   L PY   ++  L++S+ +S +L+ +P  L+  F+WAQ 
Sbjct: 8   ESQLLKTLTSILTSEKTHFLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVSFFQWAQT 67

Query: 78  HVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFI-SSDRQHELHKLILHPTRDL 137
            +P   + P +S   L++++ SL  H+ F DAKSLL+S+I +SD    L   +LHP   L
Sbjct: 68  SIP--EAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHL 127

Query: 138 -PEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKTLMNSLVRYPSSSSI 197
            P PSKAL D ++ AY+   +PH+A QIF KM RL  +PNLLTC TL+  LVRYPSS SI
Sbjct: 128 SPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSI 187

Query: 198 LLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL 236
             AR+VF D +K+GV  +  + N+L+ GYCLE K++DAL +
Sbjct: 188 SSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGM 226

[Close]
BLAST of MELO3C011729.2 vs. Swiss-Prot
Match: sp|Q9ZVX5|PP156_ARATH (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX=3702 GN=At2g16880 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 3.2e-43
Identity = 101/221 (45.70%), Postives = 146/221 (66.06%), Query Frame = 0 

Query: 18  EQQLIQTITTILSSTKPSF-SALAPYAAHLSPSLISSIFASEALSSRPSVLIHVFKWAQK 77
           E QL++T+T+IL+S K  F   L PY   ++  L++S+ +S +L+ +P  L+  F+WAQ 
Sbjct: 8   ESQLLKTLTSILTSEKTHFLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVSFFQWAQT 67

Query: 78  HVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFI-SSDRQHELHKLILHPTRDL 137
            +P   + P +S   L++++ SL  H+ F DAKSLL+S+I +SD    L   +LHP   L
Sbjct: 68  SIP--EAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHL 127

Query: 138 -PEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKTLMNSLVRYPSSSSI 197
            P PSKAL D ++ AY+   +PH+A QIF KM RL  +PNLLTC TL+  LVRYPSS SI
Sbjct: 128 SPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSI 187

Query: 198 LLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL 236
             AR+VF D +K+GV  +  + N+L+ GYCLE K++DAL +
Sbjct: 188 SSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGM 226

[Close]
BLAST of MELO3C011729.2 vs. TrEMBL
Match: tr|A0A1S3BD66|A0A1S3BD66_CUCME (pentatricopeptide repeat-containing protein At2g16880 OS=Cucumis melo OX=3656 GN=LOC103488749 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 4.0e-123
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0 

Query: 1   MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL 60
           MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL
Sbjct: 1   MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL 60

Query: 61  SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR 120
           SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR
Sbjct: 61  SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR 120

Query: 121 QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT 180
           QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT
Sbjct: 121 QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT 180

Query: 181 LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL 236
           LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL
Sbjct: 181 LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL 235

[Close]
BLAST of MELO3C011729.2 vs. TrEMBL
Match: tr|A0A0A0KLC8|A0A0A0KLC8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175880 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 8.2e-84
Identity = 167/186 (89.78%), Postives = 177/186 (95.16%), Query Frame = 0 

Query: 1   MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL 60
           M+TPSTS++GP Q+EN EQQLIQTITTIL++TKPS SALAPYAAHLSPSLISSIFAS+AL
Sbjct: 1   METPSTSHQGPIQEENLEQQLIQTITTILNATKPSLSALAPYAAHLSPSLISSIFASKAL 60

Query: 61  SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR 120
           SS PSVL++VFKWAQKHVPSFSSPP NSLSSLLTLLPSLFRHYMF DAKSLLISFISSDR
Sbjct: 61  SSHPSVLLNVFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFRHYMFSDAKSLLISFISSDR 120

Query: 121 QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT 180
           QHELHKLILHPTRDLPEPSK L+DTSIGAYVQM QPHLATQIFNKMKRLNYRPNLLTC T
Sbjct: 121 QHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNT 180

Query: 181 LMNSLV 187
           LMNSLV
Sbjct: 181 LMNSLV 186

[Close]
BLAST of MELO3C011729.2 vs. TrEMBL
Match: tr|A0A2N9IKA1|A0A2N9IKA1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52345 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 3.6e-63
Identity = 131/225 (58.22%), Postives = 169/225 (75.11%), Query Frame = 0 

Query: 11  PTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEALSSRPSVLIHV 70
           P      + QL++TIT IL+++     +L PY  HL+  ++ S+ +SE L+SRP  LI  
Sbjct: 8   PPFSPQTKPQLLETITKILTTSNTQLESLIPYLPHLTQPILLSLLSSETLASRPYTLISF 67

Query: 71  FKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDRQHELHKLILH 130
           FK+ Q H PS +S P     SLL+LLP LF H  F DAKSLL+SFI+SDRQH+LH+LILH
Sbjct: 68  FKFLQSHSPSLTSSP----HSLLSLLPPLFAHCKFSDAKSLLVSFIASDRQHQLHRLILH 127

Query: 131 PTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKTLMNSLVRYPS 190
           P R++P+PSK L+DTSIGAYVQ  +PHLA QIF KMKRL   PNLLTC TL+N+LVR+PS
Sbjct: 128 PIRNIPKPSKTLLDTSIGAYVQSNKPHLAAQIFTKMKRLRLAPNLLTCNTLLNALVRHPS 187

Query: 191 SSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL 236
           S SI L R++FKDS+KLGV  +TNS+NI+IYGYCLE+K ++AL+L
Sbjct: 188 SYSISLCRKIFKDSVKLGVNLNTNSLNIMIYGYCLENKFREALEL 228

[Close]
BLAST of MELO3C011729.2 vs. TrEMBL
Match: tr|A0A2I4FAP2|A0A2I4FAP2_9ROSI (pentatricopeptide repeat-containing protein At2g16880 OS=Juglans regia OX=51240 GN=LOC108997070 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.4e-61
Identity = 125/225 (55.56%), Postives = 170/225 (75.56%), Query Frame = 0 

Query: 11  PTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEALSSRPSVLIHV 70
           P + +  + QL+QTI  IL+S+     +L PY  HL+  ++ S+ +S+ L+SRP  L+  
Sbjct: 6   PPKPQLIQPQLLQTIAQILTSSNAPLHSLTPYLPHLTQPILLSLLSSKTLASRPYTLLSF 65

Query: 71  FKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDRQHELHKLILH 130
           F++ Q H PS ++ P    + +L++LPSLF H  F DAKSLL+SFI+SDRQH+LH+LILH
Sbjct: 66  FRFLQSHSPSLTASP----NCVLSILPSLFSHSKFSDAKSLLVSFITSDRQHQLHRLILH 125

Query: 131 PTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKTLMNSLVRYPS 190
           P+ ++P+P +AL+DTSIGAYVQ++QPHLA QIF KMKRL   P LLTC TL+N+LVR+PS
Sbjct: 126 PSPEVPKPCRALLDTSIGAYVQLKQPHLAAQIFKKMKRLRLPPKLLTCNTLLNALVRHPS 185

Query: 191 SSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL 236
           S SI L ++VF D++KLGV P+TNS NILIYGYCLE+K  +ALDL
Sbjct: 186 SYSIALCKEVFNDAVKLGVKPNTNSFNILIYGYCLENKFGEALDL 226

[Close]
BLAST of MELO3C011729.2 vs. TrEMBL
Match: tr|A0A2P5EUR1|A0A2P5EUR1_9ROSA (Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_149420 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 9.8e-61
Identity = 129/236 (54.66%), Postives = 173/236 (73.31%), Query Frame = 0 

Query: 1   MKTPSTSYKGPTQQENQEQQLIQTITTILSSTK-PSFSALAPYAAHLSPSLISSIFASEA 60
           +KT   +   PT     + QL+Q+IT+IL+S+K P   AL+ Y  HL+ SL++SI +S +
Sbjct: 9   VKTCRPNMSPPTPTAITQPQLLQSITSILTSSKTPPLHALSSYIPHLTESLLTSILSSNS 68

Query: 61  LSSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSD 120
           L S+P+ L+  ++W++ HVPS +  P    + LL LLPSLFRH  F DAKSLL+SFISSD
Sbjct: 69  LGSQPTTLLSFYQWSRTHVPSLTRSP----TPLLALLPSLFRHNKFSDAKSLLVSFISSD 128

Query: 121 RQHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCK 180
           RQ+ LH+ +LHP R LP  SKAL+DTS+GAY+Q  +PHLA QIF+KMKR ++ PNLLTC 
Sbjct: 129 RQNHLHQALLHPNRSLPRASKALLDTSVGAYIQSGKPHLAAQIFHKMKRHHFTPNLLTCN 188

Query: 181 TLMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL 236
           TL+N+LVR+PS+ SI + + +FKD I+LGV P T S NILI GYC E+K KDAL+L
Sbjct: 189 TLLNALVRFPSTHSISMCKAIFKDMIRLGVSPSTTSFNILIRGYCSENKFKDALEL 240

The following BLAST results are available for this feature:
BLAST of MELO3C011729.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008445857.16.1e-123100.00PREDICTED: pentatricopeptide repeat-containing protein At2g16880 [Cucumis melo] ... [more]
XP_004143692.11.0e-10990.60PREDICTED: pentatricopeptide repeat-containing protein At2g16880 [Cucumis sativu... [more]
XP_023525433.12.8e-9176.60pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pep... [more]
XP_022942538.16.1e-9176.60pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_0... [more]
XP_022139038.11.0e-9076.17pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_... [more]
BLAST of MELO3C011729.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G16880.11.8e-4445.70Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of MELO3C011729.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZVX5|PP156_ARATH3.2e-4345.70Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX... [more]
BLAST of MELO3C011729.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BD66|A0A1S3BD66_CUCME4.0e-123100.00pentatricopeptide repeat-containing protein At2g16880 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A0A0KLC8|A0A0A0KLC8_CUCSA8.2e-8489.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175880 PE=4 SV=1[more]
tr|A0A2N9IKA1|A0A2N9IKA1_FAGSY3.6e-6358.22Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52345 PE=4 SV=1[more]
tr|A0A2I4FAP2|A0A2I4FAP2_9ROSI3.4e-6155.56pentatricopeptide repeat-containing protein At2g16880 OS=Juglans regia OX=51240 ... [more]
tr|A0A2P5EUR1|A0A2P5EUR1_9ROSA9.8e-6154.66Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011729.2.1MELO3C011729.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 246..295
e-value: 6.6E-15
score: 54.9
coord: 561..610
e-value: 5.9E-16
score: 58.3
coord: 421..469
e-value: 1.6E-16
score: 60.1
coord: 316..364
e-value: 6.5E-19
score: 67.7
coord: 632..678
e-value: 1.2E-15
score: 57.3
coord: 492..540
e-value: 1.7E-13
score: 50.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 669..702
e-value: 8.6E-6
score: 23.6
coord: 320..353
e-value: 7.5E-10
score: 36.4
coord: 389..423
e-value: 2.9E-7
score: 28.2
coord: 634..667
e-value: 4.3E-9
score: 34.0
coord: 249..282
e-value: 3.3E-6
score: 24.9
coord: 424..458
e-value: 1.6E-11
score: 41.7
coord: 494..527
e-value: 1.2E-4
score: 20.0
coord: 565..598
e-value: 1.2E-8
score: 32.6
coord: 354..388
e-value: 5.0E-5
score: 21.2
coord: 529..563
e-value: 5.2E-8
score: 30.6
coord: 215..248
e-value: 2.1E-8
score: 31.8
coord: 285..317
e-value: 0.0016
score: 16.5
coord: 600..628
e-value: 7.1E-6
score: 23.9
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 382..415
e-value: 1.5E-5
score: 24.5
coord: 208..240
e-value: 1.7E-7
score: 30.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 148..184
e-value: 0.0081
score: 16.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 212..246
score: 10.896
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 632..666
score: 13.143
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 527..561
score: 11.871
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 387..421
score: 11.159
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 422..456
score: 13.811
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 174..211
score: 6.445
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 760..783
score: 5.667
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 139..173
score: 8.013
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 597..631
score: 10.15
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 317..351
score: 13.208
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 457..491
score: 8.966
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 282..316
score: 11.334
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 247..281
score: 11.323
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 725..759
score: 7.706
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 492..526
score: 10.424
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 562..596
score: 12.496
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 352..386
score: 10.939
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 667..701
score: 10.808
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 133..276
e-value: 7.1E-26
score: 93.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 706..782
e-value: 2.7E-6
score: 29.0
coord: 414..485
e-value: 2.0E-20
score: 75.1
coord: 277..345
e-value: 1.0E-21
score: 79.3
coord: 346..413
e-value: 9.3E-19
score: 69.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 613..705
e-value: 3.0E-24
score: 87.3
coord: 510..612
e-value: 2.3E-32
score: 113.8
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 334..750
coord: 204..355
NoneNo IPR availablePANTHERPTHR24015:SF871SUBFAMILY NOT NAMEDcoord: 334..750
coord: 204..355
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 544..697
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 398..591

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C011729.2Csa5G175880Cucumber (Chinese Long) v2cumedB348
MELO3C011729.2CSPI05G08820Wild cucumber (PI 183967)cpimedB350
MELO3C011729.2Cucsa.166010Cucumber (Gy14) v1cgymedB285
MELO3C011729.2CmaCh04G002690Cucurbita maxima (Rimu)cmamedB738
MELO3C011729.2CmoCh04G002750Cucurbita moschata (Rifu)cmomedB733
MELO3C011729.2Lsi04G008130Bottle gourd (USVL1VR-Ls)lsimedB297
MELO3C011729.2Cp4.1LG01g04310Cucurbita pepo (Zucchini)cpemedB438
MELO3C011729.2CsGy5G006210Cucumber (Gy14) v2cgybmedB310
MELO3C011729.2Cla020075Watermelon (97103) v1medwmB070
MELO3C011729.2ClCG02G013900Watermelon (Charleston Gray)medwcgB055
MELO3C011729.2Cla97C02G039540Watermelon (97103) v2medwmbB050
MELO3C011729.2Bhi07G000879Wax gourdmedwgoB082
MELO3C011729.2Carg25669Silver-seed gourdcarmedB0852
MELO3C011729.2CsaV3_5G006270Cucumber (Chinese Long) v3cucmedB362
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C011729.2Silver-seed gourdcarmedB0844
MELO3C011729.2Cucumber (Chinese Long) v3cucmedB367
MELO3C011729.2Cucurbita maxima (Rimu)cmamedB302
MELO3C011729.2Cucurbita maxima (Rimu)cmamedB567
MELO3C011729.2Cucurbita maxima (Rimu)cmamedB739
MELO3C011729.2Cucurbita moschata (Rifu)cmomedB289
MELO3C011729.2Cucurbita moschata (Rifu)cmomedB555
MELO3C011729.2Cucurbita moschata (Rifu)cmomedB734
MELO3C011729.2Cucurbita pepo (Zucchini)cpemedB188
MELO3C011729.2Cucurbita pepo (Zucchini)cpemedB291
MELO3C011729.2Cucurbita pepo (Zucchini)cpemedB436
MELO3C011729.2Wild cucumber (PI 183967)cpimedB357
MELO3C011729.2Cucumber (Chinese Long) v2cumedB355
MELO3C011729.2Melon (DHL92) v3.6.1medmedB003
MELO3C011729.2Bottle gourd (USVL1VR-Ls)lsimedB045
MELO3C011729.2Bottle gourd (USVL1VR-Ls)lsimedB178
MELO3C011729.2Watermelon (97103) v1medwmB043