Carg25669 (gene) Silver-seed gourd

Overview
NameCarg25669
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein
LocationCucurbita_argyrosperma_scaffold_291 : 43257 .. 45590 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACTCCTTCAATCTCAAACCAGCGACCATCGGAACTGATTCAAACCATCACAACGATTCTCACTTCCACCAAAGCGCCTCTCACAGCACTCGCTCCTTACGCCGCTCACCTTTCCCCTTCCCTCGTCTCCTCCATTTTATCCTCTAAAGCTCTGAGTTCTCATCCCACTATTCTCCTCTCTCTCTTCAAGTGGGCTCAGAAGCATGTTCCTTCCTTCTCTTCTCCGCCAAATAATTCTCTTTCTTCTCTCTTCACCATCTTGCCATCTCTGTTCAGTCACAACAAGTTCTCTGATGCCAAATCCCTTCTTGTCTCCTTCATTGCCAATGATCGCCAGCATGAACTTCATAAGTTGATTCTTCATCCAACTCGTGATCTTCCCAGGCCGTCCAAGGCTCTTATGGATACCTCCATTGGCGCCTATGTGCAAATGGGCAAGCCCCATCTGGCTGCTCAGATTTTCAAGAAGATGAAGCGGCTTAATTACCGGCCGAATTTGCTCACGTGCAACACATTGCTGAATTCTTTGGTACGATATCCTTCTTTGAATTCGATTCTGTTGTCTAGAGAGGTATTCAAGGATTCTGTTAAACTGGGTGTGGTGCTGAATACTAATAGCTTCAATATTTTGATATATGGGTATTGCTTGGAGAGTAAATTTAAGGATGCTTTGGATTTGGTGAATAAAATGGGTGAGTTTGGCTGTGTACCGGATAATGTGAGTTATAATACGATATTGGATGCATTGTGCAAGAAGGGGCAGTTACATGAGGCGCGAGACTTGCTGTTGGACATGAAGAATAAAGGACTGTTGCCTAATAAGAATACGTATAATATTTTGGTTTCTGGGTACTGCAAATTGGGGTGGTTGAAGGAGGCAACAAAGGTGATCGAACTAATGACGCAGAATAATTTGTTGCCTGATGTTTGGACTTATAATATGTTGATTAGTGGGTTTTGTAATGATGGTAAGATTGATGAAGCTTTTAGGTTGAGAGATGAGATGGAGAAGATGAAAATGTTGCCTGATGTGGTTACCTATAACACGTTGATTGATGGGTGTTTTGAGTGGCGGGGTAGTTCGGAGGCATACTGTTTGATTGAAGAAATGGATAAGAAAGGACTAAAGTGTAATGCAATTACTTACAATATAATGTTGAAATGGATGTGCAAGGAAGGTAATATGAATGAAGCAACTAACACTGTCCAGAAAATGGAAGAAAATGGATTCTCCCCTGATTGTGTTACGTACAATACTCTTATAAATGCTTATTGTAAATCTGGAAAAATGGGAGAAGCGTTTAAAATGATGGACGAAATGACCAGGAAAGGTTTGAAAATTGATACTTGTACCCTGAATACTATTCTCCATTCTCTCAGTGGGGAGAAAAAGCTTGATGAGGCATATAAGTTACTGTGCAGTGCTAGTAAGCGGGGCTATATTATCGATGAGGTTAGCTATGGTACTCTGATCATGGGTTACTTCAAAGATGAAAAGGCAAACAGAGCCTTAAGTCTTTGGGATGAAATGAAGGAGAGACAGATTCTTCCAAGTATTGTCACCTATAATTCTGTGATTGGAGGACTATGTCAGTCGGGGAAAACGGATCAAGCTATAGATAAGCTGAATGAGCTTCTTGAGAGTGGATTAGTCCCTGATGAAACTACTTACAACATAATTATTAATGGCTATTGTTCGGAAGGGAATGTGCAAAAAGCATTCCAATTCCATAACAAAATGGTTGAGAATTTTTTCAAGCCAGATGTCTTTACCTGTAATATTCTTCTTTGTGGGTTATGTAGAGAGGGTATGCTAGAGAAGGCTCTTAAGCTGTTCAATACTTGGGTTTCGAAAGCCAAAGACATTGATGTAGTTACATATAATACCTTAATATCTAGCCTGTGCAAAGAAGGGAAATTTGAGAATGCTTATGATCTTCTCACAGACATGGAAGAGAAAAAATTAGAACCTGATAATTATACATACAATGCAATTCTTGGTGCACTAACAGATGCTGGGAGGATTAATGAGGCTGAGAAGTTTATGTTGAAAATGGTTGAATCAGGAAAATTGCATGACCAGAATTTAAAATTTGACAAAGGGCGGAGTGTGGCAACCTCTGAACTTCCAGAACACATCGATTCCAAGTCTATGGCGTACTCGGATCAGATAAATGAACTGTGTAATCAGCATAAGTATAAGGATGCAATGCATCTTTTTGATGAAGTTACAAAGAAAGGTGTTGTTTTAAACAGATATACTTATCTAAGTTTGATGGAAGGGCTGATTAAGAGGCGAAAAAGCACATCAAAGGCCAGCCGATCATAA

mRNA sequence

ATGGAAACTCCTTCAATCTCAAACCAGCGACCATCGGAACTGATTCAAACCATCACAACGATTCTCACTTCCACCAAAGCGCCTCTCACAGCACTCGCTCCTTACGCCGCTCACCTTTCCCCTTCCCTCGTCTCCTCCATTTTATCCTCTAAAGCTCTGAGTTCTCATCCCACTATTCTCCTCTCTCTCTTCAAGTGGGCTCAGAAGCATGTTCCTTCCTTCTCTTCTCCGCCAAATAATTCTCTTTCTTCTCTCTTCACCATCTTGCCATCTCTGTTCAGTCACAACAAGTTCTCTGATGCCAAATCCCTTCTTGTCTCCTTCATTGCCAATGATCGCCAGCATGAACTTCATAAGTTGATTCTTCATCCAACTCGTGATCTTCCCAGGCCGTCCAAGGCTCTTATGGATACCTCCATTGGCGCCTATGTGCAAATGGGCAAGCCCCATCTGGCTGCTCAGATTTTCAAGAAGATGAAGCGGCTTAATTACCGGCCGAATTTGCTCACGTGCAACACATTGCTGAATTCTTTGGTACGATATCCTTCTTTGAATTCGATTCTGTTGTCTAGAGAGGTATTCAAGGATTCTGTTAAACTGGGTGTGGTGCTGAATACTAATAGCTTCAATATTTTGATATATGGGTATTGCTTGGAGAGTAAATTTAAGGATGCTTTGGATTTGGTGAATAAAATGGGTGAGTTTGGCTGTGTACCGGATAATGTGAGTTATAATACGATATTGGATGCATTGTGCAAGAAGGGGCAGTTACATGAGGCGCGAGACTTGCTGTTGGACATGAAGAATAAAGGACTGTTGCCTAATAAGAATACGTATAATATTTTGGTTTCTGGGTACTGCAAATTGGGGTGGTTGAAGGAGGCAACAAAGGTGATCGAACTAATGACGCAGAATAATTTGTTGCCTGATGTTTGGACTTATAATATGTTGATTAGTGGGTTTTGTAATGATGGTAAGATTGATGAAGCTTTTAGGTTGAGAGATGAGATGGAGAAGATGAAAATGTTGCCTGATGTGGTTACCTATAACACGTTGATTGATGGGTGTTTTGAGTGGCGGGGTAGTTCGGAGGCATACTGTTTGATTGAAGAAATGGATAAGAAAGGACTAAAGTGTAATGCAATTACTTACAATATAATGTTGAAATGGATGTGCAAGGAAGGTAATATGAATGAAGCAACTAACACTGTCCAGAAAATGGAAGAAAATGGATTCTCCCCTGATTGTGTTACGTACAATACTCTTATAAATGCTTATTGTAAATCTGGAAAAATGGGAGAAGCGTTTAAAATGATGGACGAAATGACCAGGAAAGGTTTGAAAATTGATACTTGTACCCTGAATACTATTCTCCATTCTCTCAGTGGGGAGAAAAAGCTTGATGAGGCATATAAGTTACTGTGCAGTGCTAGTAAGCGGGGCTATATTATCGATGAGGTTAGCTATGGTACTCTGATCATGGGTTACTTCAAAGATGAAAAGGCAAACAGAGCCTTAAGTCTTTGGGATGAAATGAAGGAGAGACAGATTCTTCCAAGTATTGTCACCTATAATTCTGTGATTGGAGGACTATGTCAGTCGGGGAAAACGGATCAAGCTATAGATAAGCTGAATGAGCTTCTTGAGAGTGGATTAGTCCCTGATGAAACTACTTACAACATAATTATTAATGGCTATTGTTCGGAAGGGAATGTGCAAAAAGCATTCCAATTCCATAACAAAATGGTTGAGAATTTTTTCAAGCCAGATGTCTTTACCTGTAATATTCTTCTTTGTGGGTTATGTAGAGAGGGTATGCTAGAGAAGGCTCTTAAGCTGTTCAATACTTGGGTTTCGAAAGCCAAAGACATTGATGTAGTTACATATAATACCTTAATATCTAGCCTGTGCAAAGAAGGGAAATTTGAGAATGCTTATGATCTTCTCACAGACATGGAAGAGAAAAAATTAGAACCTGATAATTATACATACAATGCAATTCTTGGTGCACTAACAGATGCTGGGAGGATTAATGAGGCTGAGAAGTTTATGTTGAAAATGGTTGAATCAGGAAAATTGCATGACCAGAATTTAAAATTTGACAAAGGGCGGAGTGTGGCAACCTCTGAACTTCCAGAACACATCGATTCCAAGTCTATGGCGTACTCGGATCAGATAAATGAACTGTGTAATCAGCATAAGTATAAGGATGCAATGCATCTTTTTGATGAAGTTACAAAGAAAGGTGTTGTTTTAAACAGATATACTTATCTAAGTTTGATGGAAGGGCTGATTAAGAGGCGAAAAAGCACATCAAAGGCCAGCCGATCATAA

Coding sequence (CDS)

ATGGAAACTCCTTCAATCTCAAACCAGCGACCATCGGAACTGATTCAAACCATCACAACGATTCTCACTTCCACCAAAGCGCCTCTCACAGCACTCGCTCCTTACGCCGCTCACCTTTCCCCTTCCCTCGTCTCCTCCATTTTATCCTCTAAAGCTCTGAGTTCTCATCCCACTATTCTCCTCTCTCTCTTCAAGTGGGCTCAGAAGCATGTTCCTTCCTTCTCTTCTCCGCCAAATAATTCTCTTTCTTCTCTCTTCACCATCTTGCCATCTCTGTTCAGTCACAACAAGTTCTCTGATGCCAAATCCCTTCTTGTCTCCTTCATTGCCAATGATCGCCAGCATGAACTTCATAAGTTGATTCTTCATCCAACTCGTGATCTTCCCAGGCCGTCCAAGGCTCTTATGGATACCTCCATTGGCGCCTATGTGCAAATGGGCAAGCCCCATCTGGCTGCTCAGATTTTCAAGAAGATGAAGCGGCTTAATTACCGGCCGAATTTGCTCACGTGCAACACATTGCTGAATTCTTTGGTACGATATCCTTCTTTGAATTCGATTCTGTTGTCTAGAGAGGTATTCAAGGATTCTGTTAAACTGGGTGTGGTGCTGAATACTAATAGCTTCAATATTTTGATATATGGGTATTGCTTGGAGAGTAAATTTAAGGATGCTTTGGATTTGGTGAATAAAATGGGTGAGTTTGGCTGTGTACCGGATAATGTGAGTTATAATACGATATTGGATGCATTGTGCAAGAAGGGGCAGTTACATGAGGCGCGAGACTTGCTGTTGGACATGAAGAATAAAGGACTGTTGCCTAATAAGAATACGTATAATATTTTGGTTTCTGGGTACTGCAAATTGGGGTGGTTGAAGGAGGCAACAAAGGTGATCGAACTAATGACGCAGAATAATTTGTTGCCTGATGTTTGGACTTATAATATGTTGATTAGTGGGTTTTGTAATGATGGTAAGATTGATGAAGCTTTTAGGTTGAGAGATGAGATGGAGAAGATGAAAATGTTGCCTGATGTGGTTACCTATAACACGTTGATTGATGGGTGTTTTGAGTGGCGGGGTAGTTCGGAGGCATACTGTTTGATTGAAGAAATGGATAAGAAAGGACTAAAGTGTAATGCAATTACTTACAATATAATGTTGAAATGGATGTGCAAGGAAGGTAATATGAATGAAGCAACTAACACTGTCCAGAAAATGGAAGAAAATGGATTCTCCCCTGATTGTGTTACGTACAATACTCTTATAAATGCTTATTGTAAATCTGGAAAAATGGGAGAAGCGTTTAAAATGATGGACGAAATGACCAGGAAAGGTTTGAAAATTGATACTTGTACCCTGAATACTATTCTCCATTCTCTCAGTGGGGAGAAAAAGCTTGATGAGGCATATAAGTTACTGTGCAGTGCTAGTAAGCGGGGCTATATTATCGATGAGGTTAGCTATGGTACTCTGATCATGGGTTACTTCAAAGATGAAAAGGCAAACAGAGCCTTAAGTCTTTGGGATGAAATGAAGGAGAGACAGATTCTTCCAAGTATTGTCACCTATAATTCTGTGATTGGAGGACTATGTCAGTCGGGGAAAACGGATCAAGCTATAGATAAGCTGAATGAGCTTCTTGAGAGTGGATTAGTCCCTGATGAAACTACTTACAACATAATTATTAATGGCTATTGTTCGGAAGGGAATGTGCAAAAAGCATTCCAATTCCATAACAAAATGGTTGAGAATTTTTTCAAGCCAGATGTCTTTACCTGTAATATTCTTCTTTGTGGGTTATGTAGAGAGGGTATGCTAGAGAAGGCTCTTAAGCTGTTCAATACTTGGGTTTCGAAAGCCAAAGACATTGATGTAGTTACATATAATACCTTAATATCTAGCCTGTGCAAAGAAGGGAAATTTGAGAATGCTTATGATCTTCTCACAGACATGGAAGAGAAAAAATTAGAACCTGATAATTATACATACAATGCAATTCTTGGTGCACTAACAGATGCTGGGAGGATTAATGAGGCTGAGAAGTTTATGTTGAAAATGGTTGAATCAGGAAAATTGCATGACCAGAATTTAAAATTTGACAAAGGGCGGAGTGTGGCAACCTCTGAACTTCCAGAACACATCGATTCCAAGTCTATGGCGTACTCGGATCAGATAAATGAACTGTGTAATCAGCATAAGTATAAGGATGCAATGCATCTTTTTGATGAAGTTACAAAGAAAGGTGTTGTTTTAAACAGATATACTTATCTAAGTTTGATGGAAGGGCTGATTAAGAGGCGAAAAAGCACATCAAAGGCCAGCCGATCATAA

Protein sequence

METPSISNQRPSELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKALSSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDRQHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMGEFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSSEAYCLIEEMDKKGLKCNAITYNIMLKWMCKEGNMNEATNTVQKMEENGFSPDCVTYNTLINAYCKSGKMGEAFKMMDEMTRKGLKIDTCTLNTILHSLSGEKKLDEAYKLLCSASKRGYIIDEVSYGTLIMGYFKDEKANRALSLWDEMKERQILPSIVTYNSVIGGLCQSGKTDQAIDKLNELLESGLVPDETTYNIIINGYCSEGNVQKAFQFHNKMVENFFKPDVFTCNILLCGLCREGMLEKALKLFNTWVSKAKDIDVVTYNTLISSLCKEGKFENAYDLLTDMEEKKLEPDNYTYNAILGALTDAGRINEAEKFMLKMVESGKLHDQNLKFDKGRSVATSELPEHIDSKSMAYSDQINELCNQHKYKDAMHLFDEVTKKGVVLNRYTYLSLMEGLIKRRKSTSKASRS
Homology
[Close]
BLAST of Carg25669 vs. NCBI nr
Match: XP_022942538.1 (pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942539.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942540.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942542.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata])

HSP 1 Score: 445.7 bits (1145), Expect = 3.3e-121
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0 

Query: 1   METPSISNQRPSELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKALSSHPTIL 60
           METPSISNQRPSELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKALSSHPTIL
Sbjct: 1   METPSISNQRPSELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKALSSHPTIL 60

Query: 61  LSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDRQHELHKL 120
           LSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDRQHELHKL
Sbjct: 61  LSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDRQHELHKL 120

Query: 121 ILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVR 180
           ILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVR
Sbjct: 121 ILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVR 180

Query: 181 YPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 234
           YPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG
Sbjct: 181 YPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 233

[Close]
BLAST of Carg25669 vs. NCBI nr
Match: XP_023525433.1 (pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525440.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525450.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525458.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 442.2 bits (1136), Expect = 3.7e-120
Identity = 231/233 (99.14%), Postives = 232/233 (99.57%), Query Frame = 0 

Query: 1   METPSISNQRPSELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKALSSHPTIL 60
           METPSI+NQRPSELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKALSSHPTIL
Sbjct: 1   METPSITNQRPSELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKALSSHPTIL 60

Query: 61  LSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDRQHELHKL 120
           LSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDRQHELHKL
Sbjct: 61  LSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDRQHELHKL 120

Query: 121 ILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVR 180
           ILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVR
Sbjct: 121 ILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVR 180

Query: 181 YPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 234
           YPS NSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG
Sbjct: 181 YPSSNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 233

[Close]
BLAST of Carg25669 vs. NCBI nr
Match: XP_022983777.1 (pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983785.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983794.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983803.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983811.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima])

HSP 1 Score: 441.8 bits (1135), Expect = 4.8e-120
Identity = 231/233 (99.14%), Postives = 232/233 (99.57%), Query Frame = 0 

Query: 1   METPSISNQRPSELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKALSSHPTIL 60
           METPSISNQRP ELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKALSSHPTIL
Sbjct: 1   METPSISNQRPPELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKALSSHPTIL 60

Query: 61  LSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDRQHELHKL 120
           LSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIA+DRQHELHKL
Sbjct: 61  LSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIADDRQHELHKL 120

Query: 121 ILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVR 180
           ILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVR
Sbjct: 121 ILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVR 180

Query: 181 YPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 234
           YPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG
Sbjct: 181 YPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 233

[Close]
BLAST of Carg25669 vs. NCBI nr
Match: XP_022139038.1 (pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_022139039.1 pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_022139040.1 pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_022139041.1 pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia])

HSP 1 Score: 387.1 bits (993), Expect = 1.4e-103
Identity = 201/240 (83.75%), Postives = 218/240 (90.83%), Query Frame = 0 

Query: 1   METPSISNQ-------RPSELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60
           METP+  NQ       RP ELIQTITTILTS++APL+AL PYAAHLSPSL+ SI SS+ L
Sbjct: 1   METPTTPNQRLMPQENRPEELIQTITTILTSSRAPLSALGPYAAHLSPSLICSIFSSRVL 60

Query: 61  SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDR 120
           +S P++LLS FKWAQKHVP+FSSPPNNSL+SL T+LPSLFSHNKFSDAKSLLVSFIA+DR
Sbjct: 61  NSRPSVLLSFFKWAQKHVPAFSSPPNNSLTSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120

Query: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
           QH LH+LILHP+R LPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYR NLLTCNT
Sbjct: 121 QHNLHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRLNLLTCNT 180

Query: 181 LLNSLVRYPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 234
           LLNSLVRYPS NSILLSREVFKDS+KLGVV NTNSFNILIYGYCLES+FKDALDLVNKMG
Sbjct: 181 LLNSLVRYPSSNSILLSREVFKDSIKLGVVPNTNSFNILIYGYCLESRFKDALDLVNKMG 240

[Close]
BLAST of Carg25669 vs. NCBI nr
Match: XP_004143692.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g16880 [Cucumis sativus])

HSP 1 Score: 364.0 bits (933), Expect = 1.3e-96
Identity = 189/238 (79.41%), Postives = 210/238 (88.24%), Query Frame = 0 

Query: 1   METPSISNQRP-------SELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60
           METPS S+Q P        +LIQTITTIL +TK  L+ALAPYAAHLSPSL+SSI +SKAL
Sbjct: 1   METPSTSHQGPIQEENLEQQLIQTITTILNATKPSLSALAPYAAHLSPSLISSIFASKAL 60

Query: 61  SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDR 120
           SSHP++LL++FKWAQKHVPSFSSPPNNSLSSL T+LPSLF H  FSDAKSLL+SFI++DR
Sbjct: 61  SSHPSVLLNVFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFRHYMFSDAKSLLISFISSDR 120

Query: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
           QHELHKLILHPTRDLP PSK L+DTSIGAYVQM +PHLA QIF KMKRLNYRPNLLTCNT
Sbjct: 121 QHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNT 180

Query: 181 LLNSLVRYPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNK 232
           L+NSLVRYPS +SILL+R+V KDS+KLGVV NTNSFNILIYGYCLESK KDALD VNK
Sbjct: 181 LMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNK 238

[Close]
BLAST of Carg25669 vs. TAIR10
Match: AT2G16880.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 197.6 bits (501), Expect = 2.8e-50
Identity = 114/224 (50.89%), Postives = 155/224 (69.20%), Query Frame = 0 

Query: 12  SELIQTITTILTSTKAP-LTALAPYAAHLSPSLVSSILSSKALSSHPTILLSLFKWAQKH 71
           S+L++T+T+ILTS K   L  L PY   ++  L++S+LSS +L+  P  L+S F+WAQ  
Sbjct: 9   SQLLKTLTSILTSEKTHFLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVSFFQWAQTS 68

Query: 72  VPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFI-ANDRQHELHKLILHPTRDL- 131
           +P   + P++S   L +++ SL SH+KF+DAKSLLVS+I  +D    L   +LHP   L 
Sbjct: 69  IP--EAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLS 128

Query: 132 PRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLNSIL 191
           P PSKAL D ++ AY+  GKPH+A QIF+KM RL  +PNLLTCNTLL  LVRYPS  SI 
Sbjct: 129 PPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIS 188

Query: 192 LSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKM 233
            +REVF D VK+GV LN  +FN+L+ GYCLE K +DAL ++ +M
Sbjct: 189 SAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERM 230

[Close]
BLAST of Carg25669 vs. TAIR10
Match: AT5G25630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 46.6 bits (109), Expect = 8.1e-05
Identity = 36/145 (24.83%), Postives = 64/145 (44.14%), Query Frame = 0 

Query: 90  PSLFSHNKFSDAKSLLVSFIANDRQHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKP 149
           PSL S+       +LL +     +   +  ++    +   +      +  I A+ + G  
Sbjct: 78  PSLISYT------TLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNM 137

Query: 150 HLAAQIFKKMKRLNYRPNLLTCNTLLN--SLVRYPSLNSILLSREVFKDSVKLGVVLNTN 209
             A Q   KMK L   P   T NTL+    +   P  +S LL   + + +V +G   N  
Sbjct: 138 EDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGP--NIR 197

Query: 210 SFNILIYGYCLESKFKDALDLVNKM 233
           +FN+L+  +C + K ++A ++V KM
Sbjct: 198 TFNVLVQAWCKKKKVEEAWEVVKKM 214

[Close]
BLAST of Carg25669 vs. TAIR10
Match: AT3G09650.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 43.9 bits (102), Expect = 5.3e-04
Identity = 26/105 (24.76%), Postives = 56/105 (53.33%), Query Frame = 0 

Query: 131 PSKALMDTSIGAYVQMGKPHLAAQIFKKMKR---LNYRPNLLTCNTLLNSLVRYPSLNSI 190
           P   +  T +  Y++ G+    A++ + M+R    N  P+ +T  T++++ V    ++  
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR- 471

Query: 191 LLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKM 233
             +R+V  +  ++GV  N  ++N+L+ GYC + +   A DL+ +M
Sbjct: 472 --ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREM 513

[Close]
BLAST of Carg25669 vs. Swiss-Prot
Match: sp|Q9ZVX5|PP156_ARATH (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX=3702 GN=At2g16880 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 5.1e-49
Identity = 114/224 (50.89%), Postives = 155/224 (69.20%), Query Frame = 0 

Query: 12  SELIQTITTILTSTKAP-LTALAPYAAHLSPSLVSSILSSKALSSHPTILLSLFKWAQKH 71
           S+L++T+T+ILTS K   L  L PY   ++  L++S+LSS +L+  P  L+S F+WAQ  
Sbjct: 9   SQLLKTLTSILTSEKTHFLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVSFFQWAQTS 68

Query: 72  VPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFI-ANDRQHELHKLILHPTRDL- 131
           +P   + P++S   L +++ SL SH+KF+DAKSLLVS+I  +D    L   +LHP   L 
Sbjct: 69  IP--EAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLS 128

Query: 132 PRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLNSIL 191
           P PSKAL D ++ AY+  GKPH+A QIF+KM RL  +PNLLTCNTLL  LVRYPS  SI 
Sbjct: 129 PPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIS 188

Query: 192 LSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKM 233
            +REVF D VK+GV LN  +FN+L+ GYCLE K +DAL ++ +M
Sbjct: 189 SAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERM 230

[Close]
BLAST of Carg25669 vs. TrEMBL
Match: tr|A0A1S3BD66|A0A1S3BD66_CUCME (pentatricopeptide repeat-containing protein At2g16880 OS=Cucumis melo OX=3656 GN=LOC103488749 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 2.6e-90
Identity = 180/235 (76.60%), Postives = 204/235 (86.81%), Query Frame = 0 

Query: 1   METPSISNQRPS-------ELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60
           M+TPS S + P+       +LIQTITTIL+STK   +ALAPYAAHLSPSL+SSI +S+AL
Sbjct: 1   MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL 60

Query: 61  SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDR 120
           SS P++L+ +FKWAQKHVPSFSSPP NSLSSL T+LPSLF H  F DAKSLL+SFI++DR
Sbjct: 61  SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR 120

Query: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
           QHELHKLILHPTRDLP PSKALMDTSIGAYVQM +PHLA QIF KMKRLNYRPNLLTC T
Sbjct: 121 QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT 180

Query: 181 LLNSLVRYPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDL 229
           L+NSLVRYPS +SILL+R+VFKDS+KLGVV +TNS NILIYGYCLESK KDALDL
Sbjct: 181 LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDL 235

[Close]
BLAST of Carg25669 vs. TrEMBL
Match: tr|A0A0A0KLC8|A0A0A0KLC8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175880 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.2e-71
Identity = 146/186 (78.49%), Postives = 163/186 (87.63%), Query Frame = 0 

Query: 1   METPSISNQRP-------SELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60
           METPS S+Q P        +LIQTITTIL +TK  L+ALAPYAAHLSPSL+SSI +SKAL
Sbjct: 1   METPSTSHQGPIQEENLEQQLIQTITTILNATKPSLSALAPYAAHLSPSLISSIFASKAL 60

Query: 61  SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDR 120
           SSHP++LL++FKWAQKHVPSFSSPPNNSLSSL T+LPSLF H  FSDAKSLL+SFI++DR
Sbjct: 61  SSHPSVLLNVFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFRHYMFSDAKSLLISFISSDR 120

Query: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
           QHELHKLILHPTRDLP PSK L+DTSIGAYVQM +PHLA QIF KMKRLNYRPNLLTCNT
Sbjct: 121 QHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNT 180

[Close]
BLAST of Carg25669 vs. TrEMBL
Match: tr|A0A2N9IKA1|A0A2N9IKA1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52345 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 6.0e-71
Identity = 145/229 (63.32%), Postives = 181/229 (79.04%), Query Frame = 0 

Query: 4   PSISNQRPSELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKALSSHPTILLSL 63
           P  S Q   +L++TIT ILT++   L +L PY  HL+  ++ S+LSS+ L+S P  L+S 
Sbjct: 8   PPFSPQTKPQLLETITKILTTSNTQLESLIPYLPHLTQPILLSLLSSETLASRPYTLISF 67

Query: 64  FKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDRQHELHKLILH 123
           FK+ Q H PS +S P+    SL ++LP LF+H KFSDAKSLLVSFIA+DRQH+LH+LILH
Sbjct: 68  FKFLQSHSPSLTSSPH----SLLSLLPPLFAHCKFSDAKSLLVSFIASDRQHQLHRLILH 127

Query: 124 PTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVRYPS 183
           P R++P+PSK L+DTSIGAYVQ  KPHLAAQIF KMKRL   PNLLTCNTLLN+LVR+PS
Sbjct: 128 PIRNIPKPSKTLLDTSIGAYVQSNKPHLAAQIFTKMKRLRLAPNLLTCNTLLNALVRHPS 187

Query: 184 LNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKM 233
             SI L R++FKDSVKLGV LNTNS NI+IYGYCLE+KF++AL+L+NKM
Sbjct: 188 SYSISLCRKIFKDSVKLGVNLNTNSLNIMIYGYCLENKFREALELLNKM 232

[Close]
BLAST of Carg25669 vs. TrEMBL
Match: tr|A0A2I4FAP2|A0A2I4FAP2_9ROSI (pentatricopeptide repeat-containing protein At2g16880 OS=Juglans regia OX=51240 GN=LOC108997070 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 4.3e-69
Identity = 144/217 (66.36%), Postives = 175/217 (80.65%), Query Frame = 0 

Query: 13  ELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKALSSHPTILLSLFKWAQKHVP 72
           +L+QTI  ILTS+ APL +L PY  HL+  ++ S+LSSK L+S P  LLS F++ Q H P
Sbjct: 15  QLLQTIAQILTSSNAPLHSLTPYLPHLTQPILLSLLSSKTLASRPYTLLSFFRFLQSHSP 74

Query: 73  SFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDRQHELHKLILHPTRDLPRPS 132
           S ++ PN  LS    ILPSLFSH+KFSDAKSLLVSFI +DRQH+LH+LILHP+ ++P+P 
Sbjct: 75  SLTASPNCVLS----ILPSLFSHSKFSDAKSLLVSFITSDRQHQLHRLILHPSPEVPKPC 134

Query: 133 KALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLNSILLSRE 192
           +AL+DTSIGAYVQ+ +PHLAAQIFKKMKRL   P LLTCNTLLN+LVR+PS  SI L +E
Sbjct: 135 RALLDTSIGAYVQLKQPHLAAQIFKKMKRLRLPPKLLTCNTLLNALVRHPSSYSIALCKE 194

Query: 193 VFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLV 230
           VF D+VKLGV  NTNSFNILIYGYCLE+KF +ALDLV
Sbjct: 195 VFNDAVKLGVKPNTNSFNILIYGYCLENKFGEALDLV 227

[Close]
BLAST of Carg25669 vs. TrEMBL
Match: tr|A0A2P4K7P8|A0A2P4K7P8_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_60436 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 7.4e-69
Identity = 145/227 (63.88%), Postives = 174/227 (76.65%), Query Frame = 0 

Query: 6   ISNQRPSELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKALSSHPTILLSLFK 65
           ++N    ++++TIT ILT+   PL  L P+  +L+  L  S+LSSK LSS P+ LLS FK
Sbjct: 1   MNNTTKPQVLETITKILTTPNTPLETLTPHLPNLTQPLFLSLLSSKTLSSRPSTLLSFFK 60

Query: 66  WAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDRQHELHKLILHPT 125
           + Q H PS +S P+    SL ++LPSLF H KFSDAKSLLVSFIA+DR HELH+ +LHP 
Sbjct: 61  FLQSHSPSLTSSPH----SLLSLLPSLFGHGKFSDAKSLLVSFIASDRHHELHRFLLHPP 120

Query: 126 RDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNTLLNSLVRYPSLN 185
           R  P+PSKA++DTSIGAYVQ  +PHLAAQIF KMKRL   P LLTCNTLLN+LVR+PS  
Sbjct: 121 RLAPKPSKAVLDTSIGAYVQSKQPHLAAQIFHKMKRLRLAPKLLTCNTLLNALVRHPSTY 180

Query: 186 SILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKM 233
           SI L R VFKD+VKLGV LNTNSFNI+IYGYCLE+KF DAL LVNKM
Sbjct: 181 SISLCRAVFKDAVKLGVNLNTNSFNIMIYGYCLENKFSDALGLVNKM 223

The following BLAST results are available for this feature:
BLAST of Carg25669 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022942538.13.3e-121100.00pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_0... [more]
XP_023525433.13.7e-12099.14pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pep... [more]
XP_022983777.14.8e-12099.14pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022... [more]
XP_022139038.11.4e-10383.75pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_... [more]
XP_004143692.11.3e-9679.41PREDICTED: pentatricopeptide repeat-containing protein At2g16880 [Cucumis sativu... [more]
BLAST of Carg25669 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G16880.12.8e-5050.89Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G25630.28.1e-0524.83Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G09650.15.3e-0424.76Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Carg25669 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZVX5|PP156_ARATH5.1e-4950.89Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX... [more]
BLAST of Carg25669 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BD66|A0A1S3BD66_CUCME2.6e-9076.60pentatricopeptide repeat-containing protein At2g16880 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A0A0KLC8|A0A0A0KLC8_CUCSA1.2e-7178.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175880 PE=4 SV=1[more]
tr|A0A2N9IKA1|A0A2N9IKA1_FAGSY6.0e-7163.32Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52345 PE=4 SV=1[more]
tr|A0A2I4FAP2|A0A2I4FAP2_9ROSI4.3e-6966.36pentatricopeptide repeat-containing protein At2g16880 OS=Juglans regia OX=51240 ... [more]
tr|A0A2P4K7P8|A0A2P4K7P8_QUESU7.4e-6963.88Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_6... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25669-RACarg25669-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 522..556
e-value: 6.2E-8
score: 30.4
coord: 487..520
e-value: 1.3E-5
score: 23.1
coord: 347..381
e-value: 1.5E-5
score: 22.8
coord: 592..615
e-value: 1.1E-6
score: 26.4
coord: 278..311
e-value: 1.2E-7
score: 29.5
coord: 662..691
e-value: 1.4E-4
score: 19.8
coord: 242..275
e-value: 3.6E-9
score: 34.2
coord: 627..660
e-value: 3.3E-10
score: 37.5
coord: 313..346
e-value: 2.1E-9
score: 35.0
coord: 558..591
e-value: 5.6E-10
score: 36.8
coord: 417..451
e-value: 3.5E-11
score: 40.6
coord: 382..416
e-value: 5.0E-9
score: 33.8
coord: 208..240
e-value: 2.1E-8
score: 31.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 140..177
e-value: 3.4E-5
score: 23.7
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 201..232
e-value: 9.2E-7
score: 28.4
coord: 375..408
e-value: 6.8E-8
score: 32.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 625..671
e-value: 1.4E-17
score: 63.5
coord: 485..533
e-value: 3.7E-14
score: 52.5
coord: 554..603
e-value: 3.6E-16
score: 59.0
coord: 239..288
e-value: 2.1E-18
score: 66.1
coord: 309..356
e-value: 3.6E-18
score: 65.4
coord: 414..461
e-value: 4.0E-16
score: 58.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 520..554
score: 12.156
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 167..204
score: 5.963
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 205..239
score: 11.345
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 380..414
score: 12.332
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 485..519
score: 11.137
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 310..344
score: 13.208
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 660..694
score: 10.052
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 132..166
score: 8.791
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 753..777
score: 5.327
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 590..620
score: 9.986
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 415..449
score: 14.041
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 275..309
score: 11.97
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 718..752
score: 8.353
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 450..484
score: 8.429
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 625..659
score: 13.822
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 345..379
score: 10.38
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 240..274
score: 13.274
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 555..589
score: 12.715
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 185..270
e-value: 4.1E-21
score: 77.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 570..710
e-value: 4.4E-38
score: 133.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 360..464
e-value: 7.2E-31
score: 108.9
coord: 271..359
e-value: 1.3E-29
score: 104.8
coord: 465..569
e-value: 6.8E-29
score: 102.5
coord: 12..184
e-value: 5.3E-9
score: 37.6
coord: 711..775
e-value: 6.4E-6
score: 27.6
NoneNo IPR availablePANTHERPTHR24015:SF871SUBFAMILY NOT NAMEDcoord: 326..731
NoneNo IPR availablePANTHERPTHR24015:SF871SUBFAMILY NOT NAMEDcoord: 200..327
coord: 136..264
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 326..731
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 200..327
coord: 136..264
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 464..688