CsGy2G003310 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACATCCCAATATCAGGACTCTCCTGCCGCTCTTCTCTTCGCCGTCGCCTCCTTCGAGCTTCAAGCCTCCCATCCTCTTCAGCCATGGCGGACAAAGCAGTCACCATTCGGACCAGGAAGTTCATGACCAACAGGCTTCTCTCCAGGAAGCAATTCGTGAGTCCTTTGTCTTTGCTTTCCGCATTACTTTATGTTTATTGATTCTGCGAGGTTTGATTTTTCTCTTGGCGTCTCTTTTTTTCTTTTTTCCATGTAAGTTCCTTGTTCGGTTTTGATTTTGGACTTAGTTTCTGGATTAGGGTGTAGTGCTAGTTGCATTTTATTTGGTGCTGAAAATGGTTCGGTTTTGTATTTCATTTTGAGTTTAGGGTTTTAGTGTTGCTTATCTAATTGAAATGAAAATCACTTTCGGGTTAGCGGTATATGGTCCTTGATTGGCTATTTGTTTATAATCTTTCTGTTTCGTGATTTATGCAGGTCATTGATGTTCTTCACCCCGGCAGACCCAACGTCTCAAAGGTAATCTATTTTTCGTGTTATTTTTTTCCCCATGAAGTTATCGAGTGTTTATTGCATTTACAAAATCTGTATGAATAATTAACTTTTCAATCTATAGTATTTTTTCTCACTGGATCCTTAGTGTTTCGTGTTGTATTTTAATCCCATTTTCATTGAAATTGGAAAATCTATCTTTTCTGGCACTTGTATGGAATAAAAGGGCATTCATTTGGCACCCATGTTGCTGATATTTTGCTATGCTTTGGCTTATGGTGATCATTATGTTGTATGTTTCTATTTCTTGGTCTTAAGGCTGAGCTGAAAGAGAAGCTGGGCAGAATCTATGATGTGAAGGATCCAAATGCCATCTTTGTTTTCAAATTCAGAACTCACTTCGGTGGTGGAAAATCCACTGGGTTCGGTTTGATCTATGATTCCGTCGAGAATGCAAAGAAGTACGAGCCAAAATACAGGCTAATCAGGGTAATGTTACAATGTCCTTTTAAGCAAAACTTCAATTATTGTGCTCTTAAGATTTGTTTCATAGAATGACATTACTCAAGCATGCTTCTTATACTTCATTATCATAGAATGGCCTCGACACCAAGGTAGAAAAATCAAGAAAGCAAATGAAGGAAAGGAAGAACAGGGCAAAGAAAATCCGAGGTGTTAAGAAGGTAAGTGAACAAATTCTTATAGCTAATCGATGAATGATTCTGAAATGATAGTTGCCTTTGATTTACATTTTTATATCTTCCTACAGACCAAGGCTTCAGACGCAGCAAAAGGAGGAAAGAAGAAATAAATTTGCTGGAATTTTGTGCTTATGGTGGGCAAAGATAATCTGCAGAATTGTGTTTTTTCGTTTAGTAGAGTCCCTTTTAGCTATCTTCTTACTCTTCAATTAAATTATGTTAATCAGTGATTTGGTTGTTGGTGATTAGTGATATGAAAACTTTAGTTCTTTTGCAAGAGGACAGAATTTTTGACATTACATTTCCTTGTTTCTCTTTTTAATGTTTTGGTTGACACTTTAACCCATTGAGGCTATCATTGGTAGATTATGAAAATTGATTGATGGGATAATTCCAAAGCTTTATCAAATCTTCTACTTTGAGTTGTTTGAATCATAGAACTATAGTGTATTAACATTAGACTTCTTTTTTAATTATAGATTGTTCAAAGTAAGAAATGCAATATTAATGTTTGGGATAATAATAATAATGGAAATATTTTAGTATAA AACATCCCAATATCAGGACTCTCCTGCCGCTCTTCTCTTCGCCGTCGCCTCCTTCGAGCTTCAAGCCTCCCATCCTCTTCAGCCATGGCGGACAAAGCAGTCACCATTCGGACCAGGAAGTTCATGACCAACAGGCTTCTCTCCAGGAAGCAATTCGTCATTGATGTTCTTCACCCCGGCAGACCCAACGTCTCAAAGGCTGAGCTGAAAGAGAAGCTGGGCAGAATCTATGATGTGAAGGATCCAAATGCCATCTTTGTTTTCAAATTCAGAACTCACTTCGGTGGTGGAAAATCCACTGGGTTCGGTTTGATCTATGATTCCGTCGAGAATGCAAAGAAGTACGAGCCAAAATACAGGCTAATCAGGAATGGCCTCGACACCAAGGTAGAAAAATCAAGAAAGCAAATGAAGGAAAGGAAGAACAGGGCAAAGAAAATCCGAGGTGTTAAGAAGACCAAGGCTTCAGACGCAGCAAAAGGAGGAAAGAAGAAATAAATTTGCTGGAATTTTGTGCTTATGGTGGGCAAAGATAATCTGCAGAATTGTGTTTTTTCGTTTAGTAGAGTCCCTTTTAGCTATCTTCTTACTCTTCAATTAAATTATGTTAATCAGTGATTTGGTTGTTGGTGATTAGTGATATGAAAACTTTAGTTCTTTTGCAAGAGGACAGAATTTTTGACATTACATTTCCTTGTTTCTCTTTTTAATGTTTTGGTTGACACTTTAACCCATTGAGGCTATCATTGGTAGATTATGAAAATTGATTGATGGGATAATTCCAAAGCTTTATCAAATCTTCTACTTTGAGTTGTTTGAATCATAGAACTATAGTGTATTAACATTAGACTTCTTTTTTAATTATAGATTGTTCAAAGTAAGAAATGCAATATTAATGTTTGGGATAATAATAATAATGGAAATATTTTAGTATAA ATGGCGGACAAAGCAGTCACCATTCGGACCAGGAAGTTCATGACCAACAGGCTTCTCTCCAGGAAGCAATTCGTCATTGATGTTCTTCACCCCGGCAGACCCAACGTCTCAAAGGCTGAGCTGAAAGAGAAGCTGGGCAGAATCTATGATGTGAAGGATCCAAATGCCATCTTTGTTTTCAAATTCAGAACTCACTTCGGTGGTGGAAAATCCACTGGGTTCGGTTTGATCTATGATTCCGTCGAGAATGCAAAGAAGTACGAGCCAAAATACAGGCTAATCAGGAATGGCCTCGACACCAAGGTAGAAAAATCAAGAAAGCAAATGAAGGAAAGGAAGAACAGGGCAAAGAAAATCCGAGGTGTTAAGAAGACCAAGGCTTCAGACGCAGCAAAAGGAGGAAAGAAGAAATAA MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK
BLAST of CsGy2G003310 vs. NCBI nr
Match: XP_004139219.1 (PREDICTED: 40S ribosomal protein S24-1 [Cucumis sativus] >KGN60830.1 hypothetical protein Csa_2G012120 [Cucumis sativus]) HSP 1 Score: 215.3 bits (547), Expect = 1.3e-52 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of CsGy2G003310 vs. NCBI nr
Match: XP_022999263.1 (40S ribosomal protein S24-1-like [Cucurbita maxima]) HSP 1 Score: 213.0 bits (541), Expect = 6.4e-52 Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of CsGy2G003310 vs. NCBI nr
Match: XP_022937688.1 (40S ribosomal protein S24-1-like [Cucurbita moschata] >XP_022966001.1 40S ribosomal protein S24-1 [Cucurbita maxima] >XP_023536700.1 40S ribosomal protein S24-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 212.6 bits (540), Expect = 8.3e-52 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of CsGy2G003310 vs. NCBI nr
Match: KZV25444.1 (hypothetical protein F511_17222 [Dorcoceras hygrometricum]) HSP 1 Score: 210.7 bits (535), Expect = 3.2e-51 Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0
BLAST of CsGy2G003310 vs. NCBI nr
Match: XP_011082571.1 (40S ribosomal protein S24-1 [Sesamum indicum]) HSP 1 Score: 210.3 bits (534), Expect = 4.1e-51 Identity = 127/137 (92.70%), Postives = 129/137 (94.16%), Query Frame = 0
BLAST of CsGy2G003310 vs. TAIR10
Match: AT3G04920.1 (Ribosomal protein S24e family protein) HSP 1 Score: 198.0 bits (502), Expect = 3.8e-51 Identity = 95/105 (90.48%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of CsGy2G003310 vs. TAIR10
Match: AT5G28060.1 (Ribosomal protein S24e family protein) HSP 1 Score: 193.7 bits (491), Expect = 7.3e-50 Identity = 92/105 (87.62%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of CsGy2G003310 vs. Swiss-Prot
Match: sp|Q9SS17|RS241_ARATH (40S ribosomal protein S24-1 OS=Arabidopsis thaliana OX=3702 GN=RPS24A PE=2 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 6.9e-50 Identity = 95/105 (90.48%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of CsGy2G003310 vs. Swiss-Prot
Match: sp|Q8LC83|RS242_ARATH (40S ribosomal protein S24-2 OS=Arabidopsis thaliana OX=3702 GN=RPS24B PE=2 SV=2) HSP 1 Score: 193.7 bits (491), Expect = 1.3e-48 Identity = 92/105 (87.62%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of CsGy2G003310 vs. Swiss-Prot
Match: sp|Q75K27|RS24_DICDI (40S ribosomal protein S24 OS=Dictyostelium discoideum OX=44689 GN=rps24 PE=3 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 7.7e-33 Identity = 67/105 (63.81%), Postives = 83/105 (79.05%), Query Frame = 0
BLAST of CsGy2G003310 vs. Swiss-Prot
Match: sp|Q962Q6|RS24_SPOFR (40S ribosomal protein S24 OS=Spodoptera frugiperda OX=7108 GN=RpS24 PE=2 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.9e-31 Identity = 65/101 (64.36%), Postives = 82/101 (81.19%), Query Frame = 0
BLAST of CsGy2G003310 vs. Swiss-Prot
Match: sp|Q56JU9|RS24_BOVIN (40S ribosomal protein S24 OS=Bos taurus OX=9913 GN=RPS24 PE=2 SV=2) HSP 1 Score: 136.3 bits (342), Expect = 2.5e-31 Identity = 67/100 (67.00%), Postives = 80/100 (80.00%), Query Frame = 0
BLAST of CsGy2G003310 vs. TrEMBL
Match: tr|A0A0A0LFK1|A0A0A0LFK1_CUCSA (40S ribosomal protein S24 OS=Cucumis sativus OX=3659 GN=Csa_2G012120 PE=3 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 8.5e-53 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of CsGy2G003310 vs. TrEMBL
Match: tr|A0A1S3C1J8|A0A1S3C1J8_CUCME (40S ribosomal protein S24 OS=Cucumis melo OX=3656 GN=LOC103495842 PE=3 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 3.6e-51 Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of CsGy2G003310 vs. TrEMBL
Match: tr|A0A1R3IDR1|A0A1R3IDR1_COCAP (40S ribosomal protein S24 OS=Corchorus capsularis OX=210143 GN=CCACVL1_12792 PE=3 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 3.6e-51 Identity = 101/105 (96.19%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of CsGy2G003310 vs. TrEMBL
Match: tr|E5GBS0|E5GBS0_CUCME (40S ribosomal protein S24 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 3.6e-51 Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of CsGy2G003310 vs. TrEMBL
Match: tr|A0A1R3KSY2|A0A1R3KSY2_9ROSI (40S ribosomal protein S24 OS=Corchorus olitorius OX=93759 GN=COLO4_04733 PE=3 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 3.6e-51 Identity = 101/105 (96.19%), Postives = 105/105 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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