CsGy1G017360 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCAAAATCTGGATCCTCCACTCACAAATTCCCGACCAACGGCGCTTCTCGGAAGTGTCTCTGTTCTCCTACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCACCGGAACCGCCACAAGATCTCCTCCTCTAGGTCTTCATCTTCATCCCTTTCCCTCATTACCACTGCCGACTTGGAGCTTGCAAAGGCTAATGCCTTGAGATCATTTCTGCTCCAGATGATTAAGCCCTCCAGTAACGATCTTCAACGGCGGAGGAATTTTCATCCTCGACCTTCCAGGTTTTGTTTGATGAACGATCATGCAACTGGATTGGCTGTTTCTTGAATTCCCCCTTTTTTTTAGTTGCTTAATCAGTCGTTTGTACGTGTAGTAGATCTGGATGTCTGTTTTTGTTCCTGATTTCGATCTTCTTCCTTCGCTGAATTTCCAGATGAGTTTGTAGATATAGTACTCTGTTTGTGTACAGATTATTTCGAGACGACATTGGATCTTGACGATTCTACAAGTCTTTCTTGAAATATAATTAGTTTTTTTTTCTTTCTCTCTTTCATTTCTTTTGCATCTTTTCCTCTGTTTCTTCTTCTCTGATTCTTGCAACTGGCAAATGCAAGCGAAGTCGTAATAAACGGATGATGATTCATTACATCTTGAAATGTTTTCTTGATTTCTTTATCAAGAACTTCCACAAATTATGTTCTTAGGAATATATTCCACTTTTTTGGGGAATCTTTTCTCTGTTTTTGATAGAGATTTTGGAGTATGGTTGCATTCAATGTATCCTTCAATGGAATCTTACTATAATTTGATATTGTTGAAGAACACTATTAATTTCGCATTTAAATTTTACTTTGCTTAAGCTTTAAGCAAGTTTTGTTGTTAATAGTGTGTAATTTCCTTCCTTTTCATTGCTCACAAGTTTGTATTTCTAATTTTATTTCAAGATTCTGA ATGGCCTCAAAATCTGGATCCTCCACTCACAAATTCCCGACCAACGGCGCTTCTCGGAAGTGTCTCTGTTCTCCTACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCACCGGAACCGCCACAAGATCTCCTCCTCTAGGTCTTCATCTTCATCCCTTTCCCTCATTACCACTGCCGACTTGGAGCTTGCAAAGGCTAATGCCTTGAGATCATTTCTGCTCCAGATGATTAAGCCCTCCAGTAACGATCTTCAACGGCGGAGGAATTTTCATCCTCGACCTTCCAGATTCTGA ATGGCCTCAAAATCTGGATCCTCCACTCACAAATTCCCGACCAACGGCGCTTCTCGGAAGTGTCTCTGTTCTCCTACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCACCGGAACCGCCACAAGATCTCCTCCTCTAGGTCTTCATCTTCATCCCTTTCCCTCATTACCACTGCCGACTTGGAGCTTGCAAAGGCTAATGCCTTGAGATCATTTCTGCTCCAGATGATTAAGCCCTCCAGTAACGATCTTCAACGGCGGAGGAATTTTCATCCTCGACCTTCCAGATTCTGA MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRF
BLAST of CsGy1G017360 vs. NCBI nr
Match: XP_011655735.1 (PREDICTED: uncharacterized protein LOC101204798 [Cucumis sativus] >KGN65201.1 hypothetical protein Csa_1G264520 [Cucumis sativus]) HSP 1 Score: 175.3 bits (443), Expect = 1.0e-40 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of CsGy1G017360 vs. NCBI nr
Match: XP_008443918.1 (PREDICTED: uncharacterized protein LOC103487396 [Cucumis melo]) HSP 1 Score: 150.6 bits (379), Expect = 2.7e-33 Identity = 76/97 (78.35%), Postives = 82/97 (84.54%), Query Frame = 0
BLAST of CsGy1G017360 vs. NCBI nr
Match: XP_023515429.1 (uncharacterized protein LOC111779591 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 125.2 bits (313), Expect = 1.2e-25 Identity = 69/100 (69.00%), Postives = 75/100 (75.00%), Query Frame = 0
BLAST of CsGy1G017360 vs. NCBI nr
Match: XP_022927032.1 (uncharacterized protein LOC111433980 [Cucurbita moschata]) HSP 1 Score: 123.2 bits (308), Expect = 4.7e-25 Identity = 67/100 (67.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of CsGy1G017360 vs. NCBI nr
Match: XP_022921799.1 (uncharacterized protein LOC111429944 [Cucurbita moschata]) HSP 1 Score: 122.9 bits (307), Expect = 6.1e-25 Identity = 68/100 (68.00%), Postives = 74/100 (74.00%), Query Frame = 0
BLAST of CsGy1G017360 vs. TAIR10
Match: AT5G11090.1 (serine-rich protein-related) HSP 1 Score: 58.5 bits (140), Expect = 2.6e-09 Identity = 38/93 (40.86%), Postives = 48/93 (51.61%), Query Frame = 0
BLAST of CsGy1G017360 vs. TAIR10
Match: AT5G25280.1 (serine-rich protein-related) HSP 1 Score: 57.4 bits (137), Expect = 5.7e-09 Identity = 41/110 (37.27%), Postives = 55/110 (50.00%), Query Frame = 0
BLAST of CsGy1G017360 vs. TAIR10
Match: AT5G20370.1 (serine-rich protein-related) HSP 1 Score: 55.5 bits (132), Expect = 2.2e-08 Identity = 43/114 (37.72%), Postives = 47/114 (41.23%), Query Frame = 0
BLAST of CsGy1G017360 vs. TAIR10
Match: AT3G13227.1 (serine-rich protein-related) HSP 1 Score: 42.4 bits (98), Expect = 1.9e-04 Identity = 15/25 (60.00%), Postives = 20/25 (80.00%), Query Frame = 0
BLAST of CsGy1G017360 vs. TAIR10
Match: AT1G67910.1 (unknown protein) HSP 1 Score: 41.2 bits (95), Expect = 4.3e-04 Identity = 20/38 (52.63%), Postives = 23/38 (60.53%), Query Frame = 0
BLAST of CsGy1G017360 vs. TrEMBL
Match: tr|A0A0A0LYY6|A0A0A0LYY6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264520 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 6.9e-41 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of CsGy1G017360 vs. TrEMBL
Match: tr|A0A1S3B8Q0|A0A1S3B8Q0_CUCME (uncharacterized protein LOC103487396 OS=Cucumis melo OX=3656 GN=LOC103487396 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.8e-33 Identity = 76/97 (78.35%), Postives = 82/97 (84.54%), Query Frame = 0
BLAST of CsGy1G017360 vs. TrEMBL
Match: tr|B9SZN1|B9SZN1_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1372180 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.5e-19 Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of CsGy1G017360 vs. TrEMBL
Match: tr|A0A2P5DX22|A0A2P5DX22_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_239540 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.4e-17 Identity = 56/100 (56.00%), Postives = 69/100 (69.00%), Query Frame = 0
BLAST of CsGy1G017360 vs. TrEMBL
Match: tr|A0A2C9VP58|A0A2C9VP58_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G043000 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.1e-17 Identity = 63/100 (63.00%), Postives = 73/100 (73.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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