Cp4.1LG18g01280 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTAGGGAAGAAAAAAAAAGAAAAAGAAAAAGAAAAAGAGAATCTCAAGAAAGTCGCTCCGAACGCCTGAAACCCCCACCTTCCCTCATTTCCGTTCCGTCTCTTCCTCTTCGTTCTCTCTTTCTCTCTCGTTTTTCGATCCTAAATTCTCTAAAATTACGCTGTTTTCCATTCAGAACTTCAATCAATTTGCAGAATTGCAGGATTTTTCGCTGCCTGAACCAGTCTCAGGGTTAGCCATGGCGGCGACTCGGTTCTGGGTTTCGACTTTCTTCTTTCTCTTTACAGTAACCCTAACTTCTGTTCTTCACGTTGCGCTTGCCAACTCTGAAGGCGACGCTCTCTACACTCTCCGCCGGAGCTTGTCCGATCCTGATAACGTGCTTCAGAGTTGGGATCCTACTCTCGTCAATCCCTGTACTTGGTTCCACATTACTTGTAACCAGGACAACCGCGTTACCCGACTGTACGGTCTCTGTTTCTTCGTTTTTTTTTTTTTTTTTTTTCCTTTTTACTATTTGATTGGTTTTTTTTTTTAAAAAAAAGAACAAAGAAAAAAAGAGAGACTGTTTGTGTTCTGTTTATCTTCTTCATTTAGAATACCGGAATTTTCCGTTATGCTCTTCGTCTATTGGTACTTTCTCTTTGTGTTATGCTATTGTGAGATTTGTTTCGTTCTTGCATTATCTTCTGTTTTGGGCAAGGATCCAGTTCATCGTTTCGCGAATTTGGTTGATCGTTGTGTTTTATTATCGTCATATGAGGATCTCGACTGGTTTCCCTGTGAAGTTAAACGAATTTTAATGCTTAAAGATGAACGATAATCTTAAGAAGGAAGTGAAAATCCACCCGTCTTCTTGTTGTTTGACGGATGGTTGGGTGTGAAGGATCGACGTCCAGTATGGTGTTGGAGACTCATTTATGATAGCTCTGTTTACTTGTGTAAAAGCTTGTATACTGTTGGCTTGATGTCATCACTACCAGCTGATCAGACATTTGGTTTTGTTTTTCAGGGACTTGGGCAATTCCAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTTGAGCATCTGCAATATTTGTATGTTGTTTGTTTAATCACAATATTTAATTCTTCGTTGTTTCACTAAGTGTAGATTTGCCCACGTTCTTTGAACGATATGATTTGCCAATAATTGTGATGGAGTTATTTAAATTATTTCTAGAAATAAATTATTTTCTAGGATCATGTTTCTACTTGATGGTAAACATTTCTAAATTCGTGAATAACTAGTAGGATATGTACTACTTTGACTTTTGACAACAAAGTGTTTGATATGTGTGTGTCCAATGAGTATTGGAGTGTCCAAGTGGCGGTCTCTTAAATATGAAGTAATAGGTTGGTTTCGTCAACTAGTAGAAAGAACTCACGGTATAATTGTGAGATCCCACATCGGTTGGGGAGGGGAACGAAATATTCCTTACAAGGGCGTGGAAACCTTTCCCTAGTAGACGTGTTTTAAAAAACCTTGAGGGAAAGCCCAAAAGGAAAAGCCCAAAAAGGACACTATCTACTAGCAGTGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACGCCGTACAGTGTGTCAACGAGGATGTTGGGATCCCAAGGGGGTTGGATTATGAGATCTCACATTAGTTGGGGAGGGGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCAGTAGACGCGTTTTAAAAAGCTTGAGGGGAAGTCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGACTTGAGCTGTTATAATAATGCTGCTGAGGAGACTTGGATATCTTTTCTATTCCAAACTACTTCCAAATTCTACTAACTCTTATACTTACCTACACGCCTATTTACAACCCTCCACTCTACCTGACACAATACGAAGTTCAGTTGAAGAGCCTCATGCTTACATCTCTTCTAACCATTTTCCAAATAATGCTGCTGAGGAGCCTCATGCTTACTTCTCTTCCCCCCTAATGGCCTTTCTACCTGTTTCTTGTATCTCCTCATGAGATTCTATCTAAGGGAAAGCCTATCACAAATTGTCCTTTTAATTTGAATTTTGCTGCTCCTTACTTTCTCAATTAGTTCTAATATAAAAAATGGTTGGTATGAAAATCTCGTGTGATATACTAAATATTTAATCTGGTTTTGTATTGATTGTTGATTTTTTACTCTGTTGCCAATAAAATATGTAGGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTGTATAACAACAACATCACTGGACGAATCCCTTTTTCTTTGGGGAAACTGAAATCTCTTGTGTTCTTGTGAGTTTCGTTTACATTATTCATCCTTGTTCAGCTTGGTTATTTTTGATTTTGAAGTTTTATGTTCTTTCTAACTCCAACTTGTATGGACCAACAGTCTTTATAATTTTTTAGTATGATCATCATCTCGCAAGAAGTTGTTGCTTGTGAATATTTCATTTTTAGAATTAACTCTACAATGTTTTGAAAAACAACTTTTCTCTATCCATTTTCTGAAGAACAATCTCTTTCCGCTTCTGCTTGATAGTTGATGATAGGATTATGAAACCTATGGCTGTGATTTTTCTGTTACTGAATTGGAACTAAAATCTGAAAGAATGCTTTCTCCAGCTATCCTTTCTTTTCACATTTTTTGTCTGAACTTTTTCTTTCTTGTTTTGCAGACGGCTTAATGATAACCGATTAAATGGACCAATCCCAAGAGAACTGACTGCAATTACAAGCCTTAAAGTTGTGTAAGTCTCTGTATAATTTCACTGTTGTGTAGTAGCCATTTAGGTGATATACATCCCTGGTTTAAATTTTGTGCAATGTCATGTGATCGGTTTATGATGCATTGTGTCTCCTTTGTTTCAGGGATGTCTCAAATAATGACTTGTGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAAGTAGGCTTCTGAATTTATTTCCTTAACTATTTTTATTCTCTTATGATTCTATATTTTGGAATGCATATAAGTGTGAATGGCAGAGTAACACTCTTTTGCCAGCATCAATTCAAAGTGAAAAAAGATAAGAGAATGAATGATACTTTGTTTTTATCATAATATGTGGACTTAATCCCCCTAATATTGCTGCGCTTTAATCAAAATTAGTGTCTGTAACGATGTTGCTAGTAGAGATATTTCATTATTTACCTTCTCATACGTTGTTCGGTAACTAATTGGTAGATCCATCCTTAACCCAATTAAGGCAAGAAAATGGAAATGGCTTTACTGGCTCTATTAGTTAAGGAAATCGTTCCCGAGCAGAGGGTGATTCAAGAGGTCTCTCTTACAAGATTAGAAAAAATCTTTCCCCCCATCTTTCTGAGACTTCATTTTCAACGAATCGCCATTCCTCCGTGCCGCTACACTTTGGCCTAACCACACAACAGATAACTTAGAACCAATGGTGTTATTACTCATCTACCCTTCTCTCACACAAACCACCCTTCTCACTGTTCGTATCTCTACTTTTGAGCTTCTAATTGGTTGGCTGGCGTAAATTTCTCTACCGAGTATTGAGCCTACCCACTTATATGATTGAAAGTAATGTCGGATTTGGAGACTTGTGATAGGAGGCTGAGGAATTAACTCTCAAATCTTAGATATTCCATGTGCACATTTATCTGCTTGCTGCAGCTGTGTTTATATTATTATTGTTTACTCTTTAATTTGAGTCTGCGATGTCGAGACTTTTGGTTCTCATGATTTTGGCAAGGCGATGTCGAGACTTTTACCTAACTAATTTCTTCCCACTGCTTCAGGCCATGTACATGATATGCTTTGTAGTCTTGGTTCTCCCCATCTTTGAATATACTCTTCTCCTTGTACTAATCAACAAGTTTCCATTGTTGCAGCTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTGTTGGGACTTGCTAGCTACGACACAAATTGCACATAGAAGGTGATGGCTACAAAATTACAGCTTCAGAATGAGATAGGGGTTCGGGGGAAAAGGTAATACTAAACTCCATAGTGAATTGGAAAACACTATAATCTAAAATGACATGACAGACTAGTGTTTGTAAATTGTAATTCCAAATGCTTTTGGTTGGTATCTGTAACATTATTTTTCTTGTGTGACGATATGAATTTGTGCTAATGTAATTCTATCAACTGTTTGTTCATCTTGTTGTCTGTTCAGTGAAGAGAGTTGGAATTTTATCTTATTTTGATTTTGCCAACTTTCAAATTTATCTT AAATTAGGGAAGAAAAAAAAAGAAAAAGAAAAAGAAAAAGAGAATCTCAAGAAAGTCGCTCCGAACGCCTGAAACCCCCACCTTCCCTCATTTCCGTTCCGTCTCTTCCTCTTCGTTCTCTCTTTCTCTCTCGTTTTTCGATCCTAAATTCTCTAAAATTACGCTGTTTTCCATTCAGAACTTCAATCAATTTGCAGAATTGCAGGATTTTTCGCTGCCTGAACCAGTCTCAGGGTTAGCCATGGCGGCGACTCGGTTCTGGGTTTCGACTTTCTTCTTTCTCTTTACAGTAACCCTAACTTCTGTTCTTCACGTTGCGCTTGCCAACTCTGAAGGCGACGCTCTCTACACTCTCCGCCGGAGCTTGTCCGATCCTGATAACGTGCTTCAGAGTTGGGATCCTACTCTCGTCAATCCCTGTACTTGGTTCCACATTACTTGTAACCAGGACAACCGCGTTACCCGACTGGACTTGGGCAATTCCAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTTGAGCATCTGCAATATTTGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTGTATAACAACAACATCACTGGACGAATCCCTTTTTCTTTGGGGAAACTGAAATCTCTTGTGTTCTTACGGCTTAATGATAACCGATTAAATGGACCAATCCCAAGAGAACTGACTGCAATTACAAGCCTTAAAGTTGTGGATGTCTCAAATAATGACTTGTGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAACTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTGTTGGGACTTGCTAGCTACGACACAAATTGCACATAGAAGGTGATGGCTACAAAATTACAGCTTCAGAATGAGATAGGGGTTCGGGGGAAAAGGTAATACTAAACTCCATAGTGAATTGGAAAACACTATAATCTAAAATGACATGACAGACTAGTGTTTGTAAATTGTAATTCCAAATGCTTTTGGTTGGTATCTGTAACATTATTTTTCTTGTGTGACGATATGAATTTGTGCTAATGTAATTCTATCAACTGTTTGTTCATCTTGTTGTCTGTTCAGTGAAGAGAGTTGGAATTTTATCTTATTTTGATTTTGCCAACTTTCAAATTTATCTT ATGGCGGCGACTCGGTTCTGGGTTTCGACTTTCTTCTTTCTCTTTACAGTAACCCTAACTTCTGTTCTTCACGTTGCGCTTGCCAACTCTGAAGGCGACGCTCTCTACACTCTCCGCCGGAGCTTGTCCGATCCTGATAACGTGCTTCAGAGTTGGGATCCTACTCTCGTCAATCCCTGTACTTGGTTCCACATTACTTGTAACCAGGACAACCGCGTTACCCGACTGGACTTGGGCAATTCCAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTTGAGCATCTGCAATATTTGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTGTATAACAACAACATCACTGGACGAATCCCTTTTTCTTTGGGGAAACTGAAATCTCTTGTGTTCTTACGGCTTAATGATAACCGATTAAATGGACCAATCCCAAGAGAACTGACTGCAATTACAAGCCTTAAAGTTGTGGATGTCTCAAATAATGACTTGTGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAACTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTGTTGGGACTTGCTAGCTACGACACAAATTGCACATAG MAATRFWVSTFFFLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLCGTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT
BLAST of Cp4.1LG18g01280 vs. Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2) HSP 1 Score: 240.0 bits (611), Expect = 2.5e-62 Identity = 117/184 (63.59%), Postives = 141/184 (76.63%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.1e-60 Identity = 118/207 (57.00%), Postives = 152/207 (73.43%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2) HSP 1 Score: 234.6 bits (597), Expect = 1.1e-60 Identity = 118/195 (60.51%), Postives = 147/195 (75.38%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2) HSP 1 Score: 218.4 bits (555), Expect = 7.8e-56 Identity = 115/202 (56.93%), Postives = 142/202 (70.30%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2) HSP 1 Score: 203.0 bits (515), Expect = 3.4e-51 Identity = 106/200 (53.00%), Postives = 135/200 (67.50%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. TrEMBL
Match: A0A0A0LZF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G601530 PE=4 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 3.4e-114 Identity = 201/220 (91.36%), Postives = 211/220 (95.91%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. TrEMBL
Match: A0A067L352_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23833 PE=4 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 1.7e-102 Identity = 185/214 (86.45%), Postives = 195/214 (91.12%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. TrEMBL
Match: B9SW31_RICCO (Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_0657710 PE=4 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 2.9e-102 Identity = 181/206 (87.86%), Postives = 192/206 (93.20%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. TrEMBL
Match: A0A0B2QWR7_GLYSO (Somatic embryogenesis receptor kinase 1 OS=Glycine soja GN=glysoja_038247 PE=4 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 3.8e-102 Identity = 182/219 (83.11%), Postives = 202/219 (92.24%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. TrEMBL
Match: C6ZRZ5_SOYBN (Leucine-rich repeat protein OS=Glycine max GN=GLYMA_14G041200 PE=2 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 3.8e-102 Identity = 182/219 (83.11%), Postives = 202/219 (92.24%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. TAIR10
Match: AT5G21090.1 (AT5G21090.1 Leucine-rich repeat (LRR) family protein) HSP 1 Score: 369.0 bits (946), Expect = 2.0e-102 Identity = 177/219 (80.82%), Postives = 195/219 (89.04%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. TAIR10
Match: AT3G43740.2 (AT3G43740.2 Leucine-rich repeat (LRR) family protein) HSP 1 Score: 343.2 bits (879), Expect = 1.2e-94 Identity = 167/229 (72.93%), Postives = 183/229 (79.91%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. TAIR10
Match: AT1G71830.1 (AT1G71830.1 somatic embryogenesis receptor-like kinase 1) HSP 1 Score: 240.0 bits (611), Expect = 1.4e-63 Identity = 117/184 (63.59%), Postives = 141/184 (76.63%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. TAIR10
Match: AT1G34210.1 (AT1G34210.1 somatic embryogenesis receptor-like kinase 2) HSP 1 Score: 234.6 bits (597), Expect = 5.9e-62 Identity = 118/207 (57.00%), Postives = 152/207 (73.43%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. TAIR10
Match: AT2G13790.1 (AT2G13790.1 somatic embryogenesis receptor-like kinase 4) HSP 1 Score: 218.4 bits (555), Expect = 4.4e-57 Identity = 115/202 (56.93%), Postives = 142/202 (70.30%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. NCBI nr
Match: gi|659100430|ref|XP_008451095.1| (PREDICTED: somatic embryogenesis receptor kinase 1 [Cucumis melo]) HSP 1 Score: 421.0 bits (1081), Expect = 1.3e-114 Identity = 202/220 (91.82%), Postives = 211/220 (95.91%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. NCBI nr
Match: gi|449452727|ref|XP_004144110.1| (PREDICTED: somatic embryogenesis receptor kinase 1 [Cucumis sativus]) HSP 1 Score: 419.1 bits (1076), Expect = 4.8e-114 Identity = 201/220 (91.36%), Postives = 211/220 (95.91%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. NCBI nr
Match: gi|802560666|ref|XP_012066268.1| (PREDICTED: somatic embryogenesis receptor kinase 1 isoform X2 [Jatropha curcas]) HSP 1 Score: 380.2 bits (975), Expect = 2.5e-102 Identity = 185/214 (86.45%), Postives = 195/214 (91.12%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. NCBI nr
Match: gi|255578680|ref|XP_002530200.1| (PREDICTED: somatic embryogenesis receptor kinase 1 isoform X1 [Ricinus communis]) HSP 1 Score: 379.4 bits (973), Expect = 4.2e-102 Identity = 181/206 (87.86%), Postives = 192/206 (93.20%), Query Frame = 1
BLAST of Cp4.1LG18g01280 vs. NCBI nr
Match: gi|1012202321|ref|XP_015973543.1| (PREDICTED: somatic embryogenesis receptor kinase 1 [Arachis duranensis]) HSP 1 Score: 379.4 bits (973), Expect = 4.2e-102 Identity = 179/210 (85.24%), Postives = 198/210 (94.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|