CsaV3_1G042170 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGATTGAAAAATTAAATAAAACTATCAATTATAATAGGAATATTTATAAAATTGATTAAGTTTGAGGAGAGTTTGGTTGAAAAATTGTGTTAGAATGTTGAGGTAATAGATAAGTTATTTTAAAGGAGAAAAAAGAAAAAGGAAAAAGAGAATCTCAAGAAAGTCATTCACGTTTTCTTTACGTTGTCATTCCCAAAGCCTACAGAAAAAAGGAAAAAAAACCCCAACTTTCCTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTCCTCCTTCTCCTTTTTCCATCTTTCATTTCTCCGATTCAAATTTTCTCAACAAATTTCTCCAATTTCCCCTTTCAAAATCTTCAATTAATCCACTTAATTTTGCGCCCCTTTTCTTCAATCTTCCAGTCTCAGGGTTAGCCATGTCGGCGACTCGCTTCTGGACTTCCTCCACTTTCTTCTTTCTCCTTTCCCTAACCCTAACTTCCCTTTTTCCTCTTGCCTTTTCCAACTCCGAAGGCGATGCTCTCTACACTCTCCGTCGCAGCTTCTCCGATCCCGATAACGTTCTTCAGAGTTGGGATCCTACTCTCGTCAACCCTTGTACTTGGTTCCATATCACTTGTAATCAGGATAACCGCGTTACCCGAGTGTACGGTTTTTCTTTCTTTTTTTCCTATTTCATTGCTAACTGTTTTCTTTATTTAGAATACTCTTGTTTTTTGTATTTTATTATACGGGTTGTTTGTAAAATTTGACGAATTGTAATACTTACTCTTGTTTTTTGTATTTTATTATATGGGTTGTTTGTGAAATTTGACGAATTGTAATATTTCAAGAAGGAAGTGGAATTTTACCCATTTGGGTAATTGTTTGATTAGATTATTGGTTTTGATTTTCAGGGATTTGGGGAATTCTAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTTGAGCATCTGCAATATTTGTATGTGGTTTCTAGTTTACTTTGCTTATGTTCTTTGAATGATAGGATTTGACAATAAATGTATACGAGTGTTTAAAATTGTTTTTTCGTAGATTTTATTTGAAAGAGATATTCATGATTTTCTTATTTATTTTTGGATAAGAAATAATTTCATCGATGAATGAAATAATTCGAAGTTTATTCAGAAGAGCACGTTAAAATGGGATTACAAAATCATACTCCAATTAGGAATAAGGTGGCAGCGGTTGAGGAGAATTGGATTAGTGCGTAGTGGTTTTGTATAGTTTCATTGACTAGCAGGAGGAACTCACGAAGTACAATGTGACCGTGGAGAATTGGATTGTTTCTCTCTCCCATGTCCCAAACTACTACCAATTTGTACTAACTCTTATACTTCCTTGTACGAGTATTTACAATCGTCCACTCTAACCCCACACAGCACAAAGTTCAGTTGCATGGGCCTCATGTTTGCATCTCTTCTATCCATTTTCCCAATTACCCGTTTCTTATCTCTCTTCATGAGGGTCTATCTAAGAGAATTTGAATAGTGTCTCCTTGCTTTCCTTGTTCATAATGTGGAAAAAAAAGAAAAAGAAAGGGCTGGTATCTAAAGCTTGTCGGATATATTAATTATACATGTGTGGATCTTCTGATTGTTGATTTTCTTAATGCTGCTGTGACTAAATATGTAGGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTATATAACAACAATATCACTGGAAGAATTCCAGTTTCTTTGGGGAAATTGAAATCTCTTGTGTTCTTGTGAGTTCCATTCACGCTACTCATATTTTTTTTAGCTTGGTTATGTTGGTTTAGATGTTTTATGTTCTTTGTTACTCCAATTTTTATTGGCTAACAGTTTTTTTTATAATTATAGATCATAATCTTACAAAAAGTTATTGTTCCATGTTTTAAAGAAAAGTATCTTTCCACTTCTACTTGGTAGTTGATGCTAGGATTGTGAAACCAATGGCTATCAATTTTGTGTTTTTGGATGGGAAGTAAAATCTGAATGAATGCTTTCTCCAGTGACCCTTTCTTTTCACAATCTTTTGTCTGAACTTTTATTTTGTTTGCAGACGGCTTAATGATAACCGATTAAATGGACCAATCCCGAGAGAACTTACTGGAGTTACAAGCCTTAAAGTTGTGTAAGTCTTTGTATACAACTCTGGTTGAAGTTTTGTGCCATGCCATGTGATTGGTTTATGATGAGATGTGTCTCCTTTGCTTCAGGGATGTCTCAAGTAATAACTTGTGTGGGACCATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAAGTAGGCCTTTGAATTTTTTTCCTTCTCCATTTCTTTTCACTTACTATTTCATATTTTGAAGTGCATAAAAAGTTTATAATGCTGAGTAACTGTCTCTTGCTAACATCTATCCAAAGTGGGAAAAGAGAATAAAATGAATGATATTCTGTTTTCATCATAACATGTGGACTTCATCCCCCTTTTACTTCTGTGCTTAAATCAAAATTAGTGTCTGAAACCGACGTTGGTAGTAGATATATTTCATTATATAACTTCTCATACATGGTGTTAACTGTTCAGTAAATTATCAATAGATCCTTACCCAATTAAGGTAAGAAAATGGAAATGGCTCTACAGGTTTTATAAGTTAGGGCAATTATTTCCTATCAGAAGGTGCTACAAGAGGTCTTCCTTTCTTACAAGGCAATCTTTCTGGTTCCTAGTCTTTCTGGAACTTCTTTTTTAACTAATCACTATTCCTCCTCCCCCCTACACTTTTGCCTAACCACACAACAAATGACTAGGAGCCATTTCTCTTATTACTCAACTACCCTTCACTACTTTTGAGCTTCTAATTGGTTGGCTGGGGTAAATCTCACTATTGAGTATTGGGCCTACCACTTATATGATTGGAAGTAATGTTGGATTTGGAGACTGTGATAAAAGGCTGCAGAATTAATTCCTAAATCTTAGATACTCCATGTGCACATTGTCTGCTTGCTGTAGCATTGTTTATATTGTCGTTTACTCTTTTCTTTGAGGTCGTGATGTTAATTCTGATTCTCATGATTTCTGTCCATGTAAACAATATGCTTTGTTTCTTTCAATCCCTCTCTCCATATTCTTCCTTTTGTTTTTTCCTTTTCCCTGACAACTGACTACTAACTAATCAATAAGAAGTTATCTTTATTTCTTGTTGTATCCTTGAGCACTAGTCTCTTTTCATTTCAGAGTCTTGTATCCTTTTCCTTGAAAAAAGAAAAAACTAATGAATAAGTTTCTTTTTGATGCAGCTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTATTGGGACTTGCTAGCTATGACACAAATTGCACATAGAAGGTGATGCTACAATATTTACAGCTTAAGAATGAGAAGAATAGGGTATTATGGGGGGGAGTAATAGTGTTTTTTTCACTCAAAATAGTGAATTGGATTGGGAAATACTAGAAATCTAAAATGACAGATTGGTGTATGTAAATTGTGTAATACCAAATGCTTTGGTATTTTGTAACAGTATTTTTCGACTGCCACTACATGAGTTTGTGCTAATGGTAATTCTATCAACTGTTTGTTCATCTTGTTGTCTGTTCAGTAAATACAGTAGGAGTTTAATTTTACTTTTGATTTGTCAACTTCCAAATTTTCTCATAGCTTATGGTAAACTTAATGGTATGAATAAAATCTGTTTTAGTCAATAGAATCCTATCAATCGGGTTGGTTGGGTTGGCATTTGTT ATGTCGGCGACTCGCTTCTGGACTTCCTCCACTTTCTTCTTTCTCCTTTCCCTAACCCTAACTTCCCTTTTTCCTCTTGCCTTTTCCAACTCCGAAGGCGATGCTCTCTACACTCTCCGTCGCAGCTTCTCCGATCCCGATAACGTTCTTCAGAGTTGGGATCCTACTCTCGTCAACCCTTGTACTTGGTTCCATATCACTTGTAATCAGGATAACCGCGTTACCCGAGTGGATTTGGGGAATTCTAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTTGAGCATCTGCAATATTTGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTATATAACAACAATATCACTGGAAGAATTCCAGTTTCTTTGGGGAAATTGAAATCTCTTGTGTTCTTACGGCTTAATGATAACCGATTAAATGGACCAATCCCGAGAGAACTTACTGGAGTTACAAGCCTTAAAGTTGTGGATGTCTCAAGTAATAACTTGTGTGGGACCATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAACTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTATTGGGACTTGCTAGCTATGACACAAATTGCACATAG ATGTCGGCGACTCGCTTCTGGACTTCCTCCACTTTCTTCTTTCTCCTTTCCCTAACCCTAACTTCCCTTTTTCCTCTTGCCTTTTCCAACTCCGAAGGCGATGCTCTCTACACTCTCCGTCGCAGCTTCTCCGATCCCGATAACGTTCTTCAGAGTTGGGATCCTACTCTCGTCAACCCTTGTACTTGGTTCCATATCACTTGTAATCAGGATAACCGCGTTACCCGAGTGGATTTGGGGAATTCTAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTTGAGCATCTGCAATATTTGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTATATAACAACAATATCACTGGAAGAATTCCAGTTTCTTTGGGGAAATTGAAATCTCTTGTGTTCTTACGGCTTAATGATAACCGATTAAATGGACCAATCCCGAGAGAACTTACTGGAGTTACAAGCCTTAAAGTTGTGGATGTCTCAAGTAATAACTTGTGTGGGACCATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAACTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTATTGGGACTTGCTAGCTATGACACAAATTGCACATAG MSATRFWTSSTFFFLLSLTLTSLFPLAFSNSEGDALYTLRRSFSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPVSLGKLKSLVFLRLNDNRLNGPIPRELTGVTSLKVVDVSSNNLCGTIPTSGPFEHIPLNNFENNPRMEGPELLGLASYDTNCT
BLAST of CsaV3_1G042170 vs. NCBI nr
Match: XP_004144110.1 (PREDICTED: somatic embryogenesis receptor kinase 1 [Cucumis sativus] >KGN66414.1 hypothetical protein Csa_1G601530 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 3.4e-63 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. NCBI nr
Match: XP_008451095.1 (PREDICTED: somatic embryogenesis receptor kinase 1 [Cucumis melo]) HSP 1 Score: 251.1 bits (640), Expect = 3.4e-63 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. NCBI nr
Match: XP_022929661.1 (leucine-rich repeat protein 1-like [Cucurbita moschata]) HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55 Identity = 208/220 (94.55%), Postives = 214/220 (97.27%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. NCBI nr
Match: XP_022968251.1 (leucine-rich repeat protein 1-like [Cucurbita maxima]) HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55 Identity = 208/220 (94.55%), Postives = 214/220 (97.27%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. NCBI nr
Match: XP_023531685.1 (leucine-rich repeat protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 223.8 bits (569), Expect = 5.8e-55 Identity = 207/220 (94.09%), Postives = 213/220 (96.82%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TAIR10
Match: AT5G21090.1 (Leucine-rich repeat (LRR) family protein) HSP 1 Score: 187.6 bits (475), Expect = 8.4e-48 Identity = 188/208 (90.38%), Postives = 196/208 (94.23%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TAIR10
Match: AT3G43740.2 (Leucine-rich repeat (LRR) family protein) HSP 1 Score: 159.8 bits (403), Expect = 1.9e-39 Identity = 157/235 (66.81%), Postives = 168/235 (71.49%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TAIR10
Match: AT1G71830.1 (somatic embryogenesis receptor-like kinase 1) HSP 1 Score: 126.3 bits (316), Expect = 2.3e-29 Identity = 65/96 (67.71%), Postives = 76/96 (79.17%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TAIR10
Match: AT1G34210.1 (somatic embryogenesis receptor-like kinase 2) HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28 Identity = 59/92 (64.13%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TAIR10
Match: AT4G33430.2 (BRI1-associated receptor kinase) HSP 1 Score: 115.2 bits (287), Expect = 5.3e-26 Identity = 55/88 (62.50%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. Swiss-Prot
Match: sp|Q9FPJ5|LRR1_ARATH (Leucine-rich repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRR1 PE=1 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.5e-46 Identity = 188/208 (90.38%), Postives = 196/208 (94.23%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. Swiss-Prot
Match: sp|Q6NQP4|LRR2_ARATH (Leucine-rich repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRR2 PE=2 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 5.0e-42 Identity = 181/205 (88.29%), Postives = 192/205 (93.66%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. Swiss-Prot
Match: sp|B8ABC2|LRR1_ORYSI (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=LRR1 PE=3 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 8.9e-39 Identity = 172/194 (88.66%), Postives = 182/194 (93.81%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. Swiss-Prot
Match: sp|Q5VQP7|LRR1_ORYSJ (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LRR1 PE=1 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 8.9e-39 Identity = 172/194 (88.66%), Postives = 182/194 (93.81%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. Swiss-Prot
Match: sp|Q94AG2|SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=SERK1 PE=1 SV=2) HSP 1 Score: 126.3 bits (316), Expect = 4.1e-28 Identity = 65/96 (67.71%), Postives = 76/96 (79.17%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TrEMBL
Match: tr|A0A1S3BQQ4|A0A1S3BQQ4_CUCME (somatic embryogenesis receptor kinase 1 OS=Cucumis melo OX=3656 GN=LOC103492475 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.3e-63 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TrEMBL
Match: tr|A0A0A0LZF7|A0A0A0LZF7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G601530 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.3e-63 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TrEMBL
Match: tr|M5W141|M5W141_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G154900 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 7.8e-48 Identity = 194/207 (93.72%), Postives = 200/207 (96.62%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TrEMBL
Match: tr|I1JIR0|I1JIR0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100791577 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 6.6e-47 Identity = 193/214 (90.19%), Postives = 205/214 (95.79%), Query Frame = 0
BLAST of CsaV3_1G042170 vs. TrEMBL
Match: tr|C6ZRZ5|C6ZRZ5_SOYBN (Leucine-rich repeat protein OS=Glycine max OX=3847 GN=100786387 PE=2 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 6.6e-47 Identity = 197/219 (89.95%), Postives = 206/219 (94.06%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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