Lsi06G004460 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTAAAAGTAACTAAATCATTAGAGACTAAATTGTAAAATTGAGGACTAAAAGTGTTAAAAAAGAAAAAAAAGAAAAGAAAAGAAAAAGCTAGTGAGAAAAAGAAAAAGAGAATCTCAAGAAAGTCTTTCACGTTTTCTTTACGTTGTCATTCCCAACGCCTGAAAAAGCCCCAACCTTCCCTTCCCTTCTTCCCGTTCCGTCTCTTCCTCTTCTCTCTTTCATTTCTCCGATCCAAATTCTCCAGAAATTACACCATTTTCCGTTCAAAATCTTCAATCAACCCTCAAAATTGCACCGTTTTTCCGCCGTTTGATCCAGTCTCAGGGTTAGCCATGGCGGCGACTCACTTCTGGACTTCCTCCACCTTCTTCTTTCTCCTTTCCCTAGCCCTAACTTCTCTCTCTCTTCCCCTTGCTCTTGCTAACTCCGAAGGCGACGCTCTCTACACTCTCCGCCGCAGCTTCTCCGATCCCGATAACGTTCTTCAGAGTTGGGATCCTACTCTCGTCAACCCCTGTACTTGGTTCCACATCACTTGTAATCAGGATAACCGCGTTACCCGAGTGTACGGTTTCTGTTTCTTTCTTTTTCTTTTTACTATTTCATTGCCTTTTCTTTTCCTTTCTTTTTTTTTTTTTTTTAATAAACTTTTTTGTTTATTTAGAATACTGTTGGGTGTGTATTTAATTATCTGGGTTCTCTGTGAAGTTTAACGAATTCTAAACTCACCCATCTGGGTAATTGTTTGATCAGACAACTGGTTTTGATTTTCAGGGATTTGGGCAATTCTAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTCGAGCACCTGCAATATTTGTATGTTACATATGGTCTTTGAATGATATGATTTGACTATAATTGTATAGAAGTTGTTTAAAATTATTTCTAGACATAGTTTCTTTGGAGGAAATTGTTTTCATGGATCATGTTTCTATTTGATGGATAAAAATTTCAAAATCCATGAAAATCTTAGTTTAGTTTCATCAACTAGCGTAAAGAATTCACGAAGTACTATGTAGCTGAGGAGAATTGGATTGTTTCTCTCTCCCAAACTACTACCAATTTCTACTAACTCTTATACTTCCCTGCACAACTATTTTTAATCATCCATCCTAACCCCACACAATACAAAGTCCAGTTGCATGTGCCTCATGTCTACATCTCTTCTATCCATTTTCCCAATTTGTGCTTCCCCATTTCCTTTGCTACCCGTTTCTTATATCTCTTCATGAGAGTCTATCTAAGGGAAGGCCTACCACATATTGTCCCTTTAATTTGAATTTCGTTTCTCCTTACTTTCTCAATTAGTCCTAATGCATGTATTAAATGTATTTTTGTGCATGTTCTGATGATTTTTTTTACTCTGCTGCGACTTAATATGTAGGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTGTATAACAACAACATCACTGGAAGAATTCCAGTTTCTTTGGGGAAACTGAAATCTCTTGTGTTCTTGTGAGTTCCACTTACATTATTCATCTTTGTTTAGCTTGGCTAAGTTGGTATAGAAGTTTTATTTTCTTTGTAACTCCAACTTGTATGGACCAACATTTTTCATAATTATGGTATGATCATCATCTTACAAAAAGTTATTGCTCCATGTTTTAAAAAACAATCTCTTTCCACTTCTGCTTGGTAGTTGATGATAGGATTGTGAAACCAATGGCTGTCATTTTTGTGTTTCTGGATGGGAAGTGAAATCTGAATGAATACTTTCCCCAGTGACCCTTTCTTTTCACAATCTTTTGTCTGAACTTTTTTTTTTTGTTTTGCAGACGGCTCAATGATAACCGATTAAATGGACCAATCCCGAGAGAACTTACTGGAATTACAAGCCTTAAAGTTGTGTAAGTCTTTGTATAATTGCACTGTTGTGTAGTAGTTCGTTTAGGTGATATACATCCCTGGTCGAAGTTTTGTGCCATGTCACATGTTTGGTTTATGATGGACTGTGTCTCCTTTGTTACAGGGATGTCTCAAATAATGACTTATGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAAGTAGGCTTCTGAATTTCTTTCGTTCCCCAATTTTTCTTACTATTTGATATTTTGAAGTGCATAAAAGTGTATAGTGCAGAGTAACACTCTTTTGCCAACATCAACCCAAAGTGTAAAAAGAGTGAATGATTCTCTGTTTTCATCATAATATGTGAATTTATTCCCCTTTTATTGTTATGCTTAAATCAAAATTAGTGTCTGAAACTGATGTAGCTAGTAGAGATATTTTGTTATTTAATTTCACATACATGGTGTTCACTGTTCAGTAAATTATCGGTAGATCCTTCCTTACCCAATAAAGGTGAGAAAATGGAAATGGCTCTACAGGCTCTATTATTAGGAAAATTGTTCTCTAACAGAGGGTGTTTCAAGAGGTCTTTCTCTCTTATAAGGCAATGTGAGATGCCCGAACCCAAAAGTAGAAAAAGTTTTCTCACCATCTTTCAGGGACCTCATCTTTAACTAATCACTATTCCTCCTTCCCCCTACACTTTTGCCTAACCACACCACAGATGACTAGGAGCCATTGCTCTTATTACTCATCTACCCTTCCCTACTTTTGAGCTTTTAATTGGTTGGCTGACATAAATCTCACTGTTGAGTACTGGGCCTACCACTTTAATGATTGGAAGTAATGTAGGATTTGGAGACTTGTGATAGGAGGCTGCAGAATTAATTCTTAAATCTTAAATACTCCATGTGCACATTGTCTGCTTGCTTTAGCTTTGTTTACATTATCGTTTACTTTTTTTCTCCGAGGTCGCAATGTGGAGAATTTTGATTCTCATGATTCCAGTCCATGTATACAAATATGCTTTATAGTCTTGTTTCCCTCAATCTCTCTCTACATGTTCTTCATTTTGTTTTTTTGCTCTTCCCCGAATACTAACTAATCAATAAGTTGTTTCTTTATTCTGTTCTTTAGCCTTTTTTCATTTTCTTAACGAAAAGTCTCATATCCTTTTCTAAAGAAATGGACTAATAAGTTTATTTTGGTGCAGCTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTGTTGGGACTTGCTAGCTATGACACAAATTGCACATAGAAGGTGATGCTACAAAATTTACAGCTTGAGAATGAGGATAGGATATGGGGGAAAGTAATAGTGTTTTTCACTCAAATAGTGAATTGAATTGGGAAATACTAAAAATCTAAAATGACAGATTAGTGTTTGTAAATTGTAATACCAAATGCTTTGGTATTTTGTAACAGTATTTTTCAGCTGCCACGACATTACTTTGTGCTAATGGTAATTCTATCAACTGGTTTACCTGTTTGTTCATCTTGTTGTCTGTTCAGTAATGACAGTAGGAATTTTTATCTT AAATTAAAAGTAACTAAATCATTAGAGACTAAATTGTAAAATTGAGGACTAAAAGTGTTAAAAAAGAAAAAAAAGAAAAGAAAAGAAAAAGCTAGTGAGAAAAAGAAAAAGAGAATCTCAAGAAAGTCTTTCACGTTTTCTTTACGTTGTCATTCCCAACGCCTGAAAAAGCCCCAACCTTCCCTTCCCTTCTTCCCGTTCCGTCTCTTCCTCTTCTCTCTTTCATTTCTCCGATCCAAATTCTCCAGAAATTACACCATTTTCCGTTCAAAATCTTCAATCAACCCTCAAAATTGCACCGTTTTTCCGCCGTTTGATCCAGTCTCAGGGTTAGCCATGGCGGCGACTCACTTCTGGACTTCCTCCACCTTCTTCTTTCTCCTTTCCCTAGCCCTAACTTCTCTCTCTCTTCCCCTTGCTCTTGCTAACTCCGAAGGCGACGCTCTCTACACTCTCCGCCGCAGCTTCTCCGATCCCGATAACGTTCTTCAGAGTTGGGATCCTACTCTCGTCAACCCCTGTACTTGGTTCCACATCACTTGTAATCAGGATAACCGCGTTACCCGAGTGGATTTGGGCAATTCTAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTCGAGCACCTGCAATATTTGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTGTATAACAACAACATCACTGGAAGAATTCCAGTTTCTTTGGGGAAACTGAAATCTCTTGTGTTCTTACGGCTCAATGATAACCGATTAAATGGACCAATCCCGAGAGAACTTACTGGAATTACAAGCCTTAAAGTTGTGGATGTCTCAAATAATGACTTATGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAAGTAGGCTTCTGAATTTCTTTCGTTCCCCAATTTTTCTTACTATTTGATATTTTGAAGTGCATAAAAGTGTATAGTGCAGAGTAACACTCTTTTGCCAACATCAACCCAAAGTGTAAAAAGAGTGAATGATTCTCTGTTTTCATCATAATATGTGAATTTATTCCCCTTTTATTGTTATGCTTAAATCAAAATTAGTGTCTGAAACTGATGTAGCTAGTAGAGATATTTTGTTATTTAATTTCACATACATGGTGTTCACTGTTCAGTAAATTATCGGTAGATCCTTCCTTACCCAATAAAGGTGAGAAAATGGAAATGGCTCTACAGGCTCTATTATTAGGAAAATTGTTCTCTAACAGAGGGTGTTTCAAGAGGTCTTTCTCTCTTATAAGGCAATGTGAGATGCCCGAACCCAAAAGTAGAAAAAGTTTTCTCACCATCTTTCAGGGACCTCATCTTTAACTAATCACTATTCCTCCTTCCCCCTACACTTTTGCCTAACCACACCACAGATGACTAGGAGCCATTGCTCTTATTACTCATCTACCCTTCCCTACTTTTGAGCTTTTAATTGGTTGGCTGACATAAATCTCACTGTTGAGTACTGGGCCTACCACTTTAATGATTGGAAGTAATGTAGGATTTGGAGACTTGTGATAGGAGGCTGCAGAATTAATTCTTAAATCTTAAATACTCCATGTGCACATTGTCTGCTTGCTTTAGCTTTGTTTACATTATCGTTTACTTTTTTTCTCCGAGGTCGCAATGTGGAGAATTTTGATTCTCATGATTCCAGTCCATGTATACAAATATGCTTTATAGTCTTGTTTCCCTCAATCTCTCTCTACATGTTCTTCATTTTGTTTTTTTGCTCTTCCCCGAATACTAACTAATCAATAAGTTGTTTCTTTATTCTGTTCTTTAGCCTTTTTTCATTTTCTTAACGAAAAGTCTCATATCCTTTTCTAAAGAAATGGACTAATAAGTTTATTTTGGTGCAGCTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTGTTGGGACTTGCTAGCTATGACACAAATTGCACATAGAAGGTGATGCTACAAAATTTACAGCTTGAGAATGAGGATAGGATATGGGGGAAAGTAATAGTGTTTTTCACTCAAATAGTGAATTGAATTGGGAAATACTAAAAATCTAAAATGACAGATTAGTGTTTGTAAATTGTAATACCAAATGCTTTGGTATTTTGTAACAGTATTTTTCAGCTGCCACGACATTACTTTGTGCTAATGGTAATTCTATCAACTGGTTTACCTGTTTGTTCATCTTGTTGTCTGTTCAGTAATGACAGTAGGAATTTTTATCTT ATGGCGGCGACTCACTTCTGGACTTCCTCCACCTTCTTCTTTCTCCTTTCCCTAGCCCTAACTTCTCTCTCTCTTCCCCTTGCTCTTGCTAACTCCGAAGGCGACGCTCTCTACACTCTCCGCCGCAGCTTCTCCGATCCCGATAACGTTCTTCAGAGTTGGGATCCTACTCTCGTCAACCCCTGTACTTGGTTCCACATCACTTGTAATCAGGATAACCGCGTTACCCGAGTGGATTTGGGCAATTCTAATTTGTCTGGACATCTTGTTCCTGAACTTGGAAGGCTCGAGCACCTGCAATATTTGGAACTTTACAAAAACAACATCCATGGAACTATTCCAGATGAGCTTGGAAACTTGAAGAGCCTCATCAGTTTGGACCTGTATAACAACAACATCACTGGAAGAATTCCAGTTTCTTTGGGGAAACTGAAATCTCTTGTGTTCTTACGGCTCAATGATAACCGATTAAATGGACCAATCCCGAGAGAACTTACTGGAATTACAAGCCTTAAAGTTGTGGATGTCTCAAATAATGACTTATGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAAGTAG MAATHFWTSSTFFFLLSLALTSLSLPLALANSEGDALYTLRRSFSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPVSLGKLKSLVFLRLNDNRLNGPIPRELTGITSLKVVDVSNNDLCGTIPTSGPFEHIPLNK
BLAST of Lsi06G004460 vs. Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2) HSP 1 Score: 238.8 bits (608), Expect = 5.0e-62 Identity = 121/185 (65.41%), Postives = 143/185 (77.30%), Query Frame = 1
BLAST of Lsi06G004460 vs. Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 1.5e-61 Identity = 115/180 (63.89%), Postives = 142/180 (78.89%), Query Frame = 1
BLAST of Lsi06G004460 vs. Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2) HSP 1 Score: 228.4 bits (581), Expect = 6.8e-59 Identity = 113/179 (63.13%), Postives = 139/179 (77.65%), Query Frame = 1
BLAST of Lsi06G004460 vs. Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2) HSP 1 Score: 213.0 bits (541), Expect = 3.0e-54 Identity = 114/194 (58.76%), Postives = 139/194 (71.65%), Query Frame = 1
BLAST of Lsi06G004460 vs. Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2) HSP 1 Score: 191.4 bits (485), Expect = 9.2e-48 Identity = 103/186 (55.38%), Postives = 129/186 (69.35%), Query Frame = 1
BLAST of Lsi06G004460 vs. TrEMBL
Match: A0A0A0LZF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G601530 PE=4 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 8.3e-104 Identity = 187/197 (94.92%), Postives = 192/197 (97.46%), Query Frame = 1
BLAST of Lsi06G004460 vs. TrEMBL
Match: M5W141_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011333mg PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 4.4e-89 Identity = 160/183 (87.43%), Postives = 169/183 (92.35%), Query Frame = 1
BLAST of Lsi06G004460 vs. TrEMBL
Match: A0A0D2QKH0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G140700 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 5.8e-89 Identity = 159/172 (92.44%), Postives = 162/172 (94.19%), Query Frame = 1
BLAST of Lsi06G004460 vs. TrEMBL
Match: A0A0D2QTA8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G140700 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 5.8e-89 Identity = 159/172 (92.44%), Postives = 162/172 (94.19%), Query Frame = 1
BLAST of Lsi06G004460 vs. TrEMBL
Match: A0A0B0NDL5_GOSAR (Brassinosteroid insensitive 1-associated receptor kinase 1-like protein OS=Gossypium arboreum GN=F383_20320 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 2.2e-88 Identity = 158/172 (91.86%), Postives = 162/172 (94.19%), Query Frame = 1
BLAST of Lsi06G004460 vs. TAIR10
Match: AT5G21090.1 (AT5G21090.1 Leucine-rich repeat (LRR) family protein) HSP 1 Score: 318.5 bits (815), Expect = 2.8e-87 Identity = 152/183 (83.06%), Postives = 162/183 (88.52%), Query Frame = 1
BLAST of Lsi06G004460 vs. TAIR10
Match: AT3G43740.2 (AT3G43740.2 Leucine-rich repeat (LRR) family protein) HSP 1 Score: 295.8 bits (756), Expect = 2.0e-80 Identity = 148/210 (70.48%), Postives = 161/210 (76.67%), Query Frame = 1
BLAST of Lsi06G004460 vs. TAIR10
Match: AT1G71830.1 (AT1G71830.1 somatic embryogenesis receptor-like kinase 1) HSP 1 Score: 238.8 bits (608), Expect = 2.8e-63 Identity = 121/185 (65.41%), Postives = 143/185 (77.30%), Query Frame = 1
BLAST of Lsi06G004460 vs. TAIR10
Match: AT1G34210.1 (AT1G34210.1 somatic embryogenesis receptor-like kinase 2) HSP 1 Score: 237.3 bits (604), Expect = 8.3e-63 Identity = 115/180 (63.89%), Postives = 142/180 (78.89%), Query Frame = 1
BLAST of Lsi06G004460 vs. TAIR10
Match: AT2G13790.1 (AT2G13790.1 somatic embryogenesis receptor-like kinase 4) HSP 1 Score: 213.0 bits (541), Expect = 1.7e-55 Identity = 114/194 (58.76%), Postives = 139/194 (71.65%), Query Frame = 1
BLAST of Lsi06G004460 vs. NCBI nr
Match: gi|659100430|ref|XP_008451095.1| (PREDICTED: somatic embryogenesis receptor kinase 1 [Cucumis melo]) HSP 1 Score: 386.3 bits (991), Expect = 3.1e-104 Identity = 188/197 (95.43%), Postives = 192/197 (97.46%), Query Frame = 1
BLAST of Lsi06G004460 vs. NCBI nr
Match: gi|449452727|ref|XP_004144110.1| (PREDICTED: somatic embryogenesis receptor kinase 1 [Cucumis sativus]) HSP 1 Score: 384.4 bits (986), Expect = 1.2e-103 Identity = 187/197 (94.92%), Postives = 192/197 (97.46%), Query Frame = 1
BLAST of Lsi06G004460 vs. NCBI nr
Match: gi|694423435|ref|XP_009339518.1| (PREDICTED: somatic embryogenesis receptor kinase 1-like [Pyrus x bretschneideri]) HSP 1 Score: 343.2 bits (879), Expect = 3.0e-91 Identity = 165/189 (87.30%), Postives = 174/189 (92.06%), Query Frame = 1
BLAST of Lsi06G004460 vs. NCBI nr
Match: gi|657986962|ref|XP_008385628.1| (PREDICTED: somatic embryogenesis receptor kinase 1-like [Malus domestica]) HSP 1 Score: 342.4 bits (877), Expect = 5.2e-91 Identity = 165/189 (87.30%), Postives = 174/189 (92.06%), Query Frame = 1
BLAST of Lsi06G004460 vs. NCBI nr
Match: gi|645218539|ref|XP_008231130.1| (PREDICTED: somatic embryogenesis receptor kinase 2 [Prunus mume]) HSP 1 Score: 337.4 bits (864), Expect = 1.7e-89 Identity = 162/183 (88.52%), Postives = 169/183 (92.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |