Cp4.1LG12g09820 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGTTAAACTTGGTAGAAAATTTGAGCGGTATATCTGGTTGTACCGAAAACCACGGTCGGAAAGAAACGCTGGTTGAGTTCGGTGAAGTGGATAAGAGCGACGATGCAAATAGCCGCTACGAACTTCTTTCTTTCGGCAAACCCCAAGGTGAATCATTCCTTCTGTCCGGCTCTATTTGTGTTTATCTCCCATTTACCGATCAACTTTCAGAGAATCATATTCCGTATTCAATGATAAATAGATGCAATTTTTTACTTTGTTATTGGACTATATATTGAGTGAGCAAGGAAGAACAGAGGTAGCGAACAATATAACACAAAGTATTATGTATTGACCAACTACAATCTGTGCTAACAGAGCTGTTGGTTTTCTTCTGGGCAAAATATTTGAAGAGGAAAAAATCCCACATGGGAAATATCGTCTAAAGTGATGGATTTCAAGTGTTATGTAGTGGTTTATTGCTACATTTTTGTCGGGTCTTAGTTAGAAACACTCTTATGTCTTGGTTTCCTATGCTAACTAAAGTTAAATTCCTTTGTGTTGTTTTGTTTGAGAGGGAATTTTGAGGGAGTGTTTTTGTAATTGGGGTTGGAGGGAGAATTCTATTTGATGATAATTCTTATGGAGTTTCCTTTTCGGTGGGCCGGGATTTGTTCTCTAGATTGGGAGTTTTTCACTTCAGTTCTCGTGTTCTTTGATTGTTCTTATTACTGAAGTTTTTTTTCTTCTTGTTCCTGTTCTGTGCTGATTTTTGGGACGTTCCATAAAAGTAAATGATGGGAATGTTGTTGTTTGGAGAGAAAGGAGGTTCAACATTGGTATTTGGGATATTTGGCCCCTGGTGGTTGACTGGCTTGCAGGTGTTCGTGTTAAGGTTTACAATATTTGCTTGAAGTAGGAGTATTTGTGTGATAAGTTTTTTGTTAAAAACCAAAAGCATGCTTTTAAGTCATCGAAGTTTGGAATATCCCTTCCGGTACCAAGGGCAGCCGTAAAAGCATCATATTCAACACTAATACCATTCAACAAATATTCAACCAAAAGTTCATTAATTATATGTTCACCAGGAATTGAGTTTTTTTACATATGAAGTCTTTAGATAGACTGGTTTGATCTTCAAGCTTCTTATTATGAATATCTCCTCTCGGGTTCGGTGTCTAGCTTGAGAAGTATTGTTATACAATGTGCTGGGCACACCCCATTTAGCATTCATCATCATACTTCACTATTCTCGCTAGCATCGTATCAGTCAGAAAAATAAAGCCAACTCATAGGCCATGACTGAACGATTATAACTTGGATACAATTTACTTCCATCTATATGCTTTCTAGATTGTTTGCAACAATAGCGCTTATTTTTTTGGGGATACGAAACGGAGTATATTACTGAGAAAAAAGAGAAAAACAGCCTAGGGGTTGGGGAAGAGGGATTCCGCTCCCAACAACTACTAAAAGAGATATTTCCAATTGTAAAGGAGCATGGANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATCAACATGAGAGGACTTATCTTCCAAAGTTCTTTGACTCCTTCCCGACCAAATATGCCATAGTAAGGCCCATAGCCACAAGGTTCCGCAAGACTTTCATCCTCTTTGCCAACTTCCTACCAGATAAAACTTTAAGGAGTCAATCATCCACTTGTTCGGACAGCAAGAAATGCCAATAACTTCAAACAGAAAAGCCCAACCTCTAGAGGTGACAGTGAAGAAAAAGATGAACAATAGATTCTTTGAGTTTGACAGTCAGAATGATTTGAAGATGAAAATGGTTTAAGGTAATGGACAATAACCGGATTTTGGTTTGGATTTGTGTCACTTGGTTGAGTTGTGGGGTGGGTGCTTGGTCCTCCTCAGGTTGTAGGAAGAACAGATGGAGCAGAACAGGTCCCACTAATTGAAGATGACAACATTTGACACAAGCCGTTAGCAAATGTTTTGATACTCTAAACGCTATGGATTGATCAAGGAAGAAGAAATGCGGCAACAGAGAGTAGTAGAAGAAAGCAGTAGTGTAAGGCTGTGTAATAGCTCAACAACTTTCTATTTACCTCATAATTATACTGAAGTAAAGAAAGCCTAGCATTACCACCTCACACCTAAGTAATGAACTGAAATAAAAGAACATGACATCAGACATCTAGTATAGTGACATGCACAGTCGTCGAAGGCCAGACATAGGAAATAATATCATGCACCAAGAATTATCTGGTCCCATATTTTGTGAAGTTAATTTCATTCTTATTCAACCTTCTTTCTTAATTGTAGGCTATATATCATAAGCAGACAGCAGATTACTTTACTCCAAATCTCACCAGCAAAAGCGTGTCTTTTCCTAGTCAAATGGGATATGGCAGCAGAAAAATTTCTGTGAGGTAATTTCTATTTAATTTTACCAAATTATATGTTCCAAAGAGTTGTATAAGCCAAATTATGAAAGTTAGTCGTGTCCCAGAGTAGGAAGACTTCAGCATCTAATTGATTTAATCTGAACTTTTCTTTTATATGATGAAGCTGATTGGTTGACTATCGAAGTTTACGAAACATATAAACTCATAAAAGACTTTCTTTACTAAGAAATTTTGACTTCTAATCTGGATATATGAATGCTCACGATTGCCTCATTTTTCTCAATTGGATGCTTCACAACCTGTCCTGCTATTTAGTCACTTCAAAATAGAAAGTTAACATGGAGTATCCCACCAATTCGCCATCAAGATCATAACTAAATTTTGGATGTAATTTTTCTTTGTGGATGATCGAACCAACTTTTATCTAAAGTAAACTACAAAAAAGGTCCACAAAAAGCAGAAACATACTAGAACATAATTACAAGAACAAATGGCAACTGGTTGTTATCAAATTTTTGGATAGGAAGTTACCATTTGCTTTTTGTTAAATCTACTAAAACCCGAAAAAGATAGGCCATGGATTTAATATTTTATCGATTCAGAAACTAGCACGCTATCTAGTAAGTGAGTTATCAATAATAATTAGGGAGGAAATAATATTTGCTTCTCTATGGTTGAGGAGGACCTTCAGTGTGCAGTTCACTTGGAGGAGAGATTGCCTCTCTATGATTGAGGCTGTCCTCTTGAGTTTGCCCTTTTGTAGAATTTCCACGTGTTGTGGCAAGCGAGCTTCTTTGCTATTGCTTGAGATATTTGATTTGAGAGAATAATAGGATCTTTAGAGAGGTTGAAAGATCAAGGGAGGAGGTTTCGGGAGGGGGATCGGTTTAATGCCTTCTTGTGGACATCTGTTTATAGTCTCCTTTGTAATTATGGTATTGGCATGATTTTGTTGGATTGAAACCTTATTTTTAGTTAGTTGGGCTCCTTTTATGTGGGCTGTTTCTTTGTATGCCTTTTTCATTTTTTCTCAAACTATCATGCCTACGTTCCTAACTATAAAAATTATTTTGTTCACTTTACAGTAAAAGTAACAGATATCTTCCAGCTGCATGTGCTGCATTATCAGGTTAAAATGCTCGTCTCTTCGAAGAACAATTTCAATATTTTCCAATTATACGAGGACTTTGTTAGCTAAAATCTTTAATTCTATTGTGAGCAGAAGATGTGAGTGTTTCTTCTTCTCAGTTTGAAGACTTCTCTGTCACTAAAGCTACTAATATCAATGAGAATAAAGAACTAAAGGTATGAAATACGGTGAGTTTTATTCTTAGGTTCCTTATGTCTATAATCCTCAGATTACTATCTTTCAAATATTTTGTTTGTTGTTACTTCACTTAGACATTCAATTTAGTCTCTAAAAACATGTCTAGTCCTTGCCATTGATTATCCATTAGTTAGTTTAAAAGAATTGAAAAAAATCATAAAAAACTAATGGTAATGTTTGTAAGTTCAATGCAGATTCAGGAACCATGTTTTATTTATTTATTTGATTGATTTTTCTTGAGTTTGCAACCAGATTTGTATTGAGGTCTCTGGAGCTAAAACACGAGCAATTTTCGACAATGTGTTCAATGAAATGGTTGATAAAGCGCAGCCTATTCCCGGTTTTAGAAGAGCGAAAGGAGGTAATATCCAGAGGCGTGTTTCTTATTTGAGGTGCTCATGGCTTTCATTTTTGTTTTATCAAAACCATTCTAATAATGTTGCTAGCACCATTGTTTTCGGCTGAGCTGTTGTATATTTTACGCGCATGGTTAAGGTTACAGGTGATTGTGTTGTCTTCATGTTAGAGAAATGGAAACGTTACTAAACGACTCCTAAAAATCAGAAAATCGCTTTCTTTAATTCGTTTCTCACAATGTTTTCATTTTTCTTATCCTTTCCAATTCATTTCATTGGACTTGAATAACGCTGTTCTTCATCGAATGTCAGGAAAGACGCCGAATGTAAGTTTTCTTTCCTTTCAATCTCTTGGTTTTCAATAAGCAACTATTGACTATGTCTGAATAATGATAAGTTCATCATTTGTTATCGACAGATACCTCGGGAAATTCTATTAGAGATACTCGGACCTTCGAAGGTGTACAAACAAGTTATTAAGGAAGTTATCAACTCTACTGTTGCTGCATATGTGGAAAAGGTAAAGATATAATTGCCATTTTTATATTCTGGTTTTGAGCTGGGGTTATCTTAATCTTAAAATATTAGGCAATTCGAATCCATTTATATGTTTTGCCCTGTTCTATATGATGAATTAATAACTCAAGTCTAGAAATTGTTTTAGCATACGGAGTGGAGCCTTCTGCAATCTACGTTAAATAGTGAAAATTTTTCCACTTCATAGTAGATATTTTCTGTACATAGATACAAATATTATTGTGAGATCTCACCTTGGTTGGAGAGGAGAACGGAACCTTCTTTATAAGAGTATGAAAACCTCTCCCTAGCAGACGCGTTTTAACAACCTTGAGGGGAAGCCCGAAAGGGAAAACCCAAAGAGGACAATATCTGCTAGTGGTGGGCTTGGGCCATTACAAATGGTATCACAGGCAGACACCAGGCGATGTGCTAGCGAGGAGGCTGAACCCGAATGGGGGATGGACACGAGGCGGTGTTCCAGCAAGGACTTTGTGCCCCGTAGGGGAGTGGATTGGAGGATCCTACATCGATTGGAGAAGGGAACGAGTGCCAGTGAGGACGCTAGCCCCGAAGGGAGGTGGATTGTGAGATCCTATATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGAGTGTGGAAACCTCTCTCTAGGACAATATCTTGAGAGTAAATCCAAAAGGGAAAGTCCAAAGAGGACAATATTTGCTAGTGGTGGGCTTGAGCCGTTACAAATATGGACACAGTTCATAGTTTGGTCATCTTCATCCATAGTAGTGTTGAGCCTCATCGATAGAGGTTGTAAAGAGGATTTAAAAGCAATTAAAACATCCTCTTCTTTCTCTTTTCTATGGTAATTCATTGATTATTCTATGATAGTTTTTTTAGATTTTCATATCGAAATAGGAACTGGACCAAAAACGATATCATATATCAATGCGATTGTATAATGTGAATAGAACTGACTGGAATATAATAGAATAGAACTTTTCCCATTATAAAAAAACTAGAAGTGAATTCATTTGCTTAACGTTGGAAGTGCTGTTCATCTTAGTGTTTTTCTCTATTTTACCAATGAAGCAGGAAGCTCTAAAAGTGGGCAAAGACCTGAGAATAGAGCAAAGCTATGAGGATCTTGAAGAACAATTTGAACCAGATGAAAAGTTCTTTTTTGATGCCATTATTCAGCTCAACCAAACAAACTGAATTATTGAATTACATTGTAAGATACTTTCACCCTGAATTTTGATTAATTCAAAGTGTTTTTTTTAGCATTTCCTACACCTAATTTAGTGTTTACTCAAAAATTTCGAGCTTC AAGTTAAACTTGGTAGAAAATTTGAGCGGTATATCTGGTTGTACCGAAAACCACGGTCGGAAAGAAACGCTGGTTGAGTTCGGTGAAGTGGATAAGAGCGACGATGCAAATAGCCGCTACGAACTTCTTTCTTTCGGCAAACCCCAAGTAAATGATGGGAATGTTGTTGTTTGGAGAGAAAGGAGGTTCAACATTGGTATTTGGGATATTTGGCCCCTGGTGGTTGACTGGCTTGCAGGTGTTCGTGTTAAGGCTATATATCATAAGCAGACAGCAGATTACTTTACTCCAAATCTCACCAGCAAAAGCGTGTCTTTTCCTAGTCAAATGGGATATGGCAGCAGAAAAATTTCTGTGAGATATCTTCCAGCTGCATGTGCTGCATTATCAGAAGATGTGAGTGTTTCTTCTTCTCAGTTTGAAGACTTCTCTGTCACTAAAGCTACTAATATCAATGAGAATAAAGAACTAAAGATTTGTATTGAGGTCTCTGGAGCTAAAACACGAGCAATTTTCGACAATGTGTTCAATGAAATGGTTGATAAAGCGCAGCCTATTCCCGGTTTTAGAAGAGCGAAAGGAGGAAAGACGCCGAATATACCTCGGGAAATTCTATTAGAGATACTCGGACCTTCGAAGGTGTACAAACAAGTTATTAAGGAAGTTATCAACTCTACTGTTGCTGCATATGTGGAAAAGGAAGCTCTAAAAGTGGGCAAAGACCTGAGAATAGAGCAAAGCTATGAGGATCTTGAAGAACAATTTGAACCAGATGAAAAGTTCTTTTTTGATGCCATTATTCAGCTCAACCAAACAAACTGAATTATTGAATTACATTGTAAGATACTTTCACCCTGAATTTTGATTAATTCAAAGTGTTTTTTTTAGCATTTCCTACACCTAATTTAGTGTTTACTCAAAAATTTCGAGCTTC AAGTTAAACTTGGTAGAAAATTTGAGCGGTATATCTGGTTGTACCGAAAACCACGGTCGGAAAGAAACGCTGGTTGAGTTCGGTGAAGTGGATAAGAGCGACGATGCAAATAGCCGCTACGAACTTCTTTCTTTCGGCAAACCCCAAGTAAATGATGGGAATGTTGTTGTTTGGAGAGAAAGGAGGTTCAACATTGGTATTTGGGATATTTGGCCCCTGGTGGTTGACTGGCTTGCAGGTGTTCGTGTTAAGGCTATATATCATAAGCAGACAGCAGATTACTTTACTCCAAATCTCACCAGCAAAAGCGTGTCTTTTCCTAGTCAAATGGGATATGGCAGCAGAAAAATTTCTGTGAGATATCTTCCAGCTGCATGTGCTGCATTATCAGAAGATGTGAGTGTTTCTTCTTCTCAGTTTGAAGACTTCTCTGTCACTAAAGCTACTAATATCAATGAGAATAAAGAACTAAAGATTTGTATTGAGGTCTCTGGAGCTAAAACACGAGCAATTTTCGACAATGTGTTCAATGAAATGGTTGATAAAGCGCAGCCTATTCCCGGTTTTAGAAGAGCGAAAGGAGGAAAGACGCCGAATATACCTCGGGAAATTCTATTAGAGATACTCGGACCTTCGAAGGTGTACAAACAAGTTATTAAGGAAGTTATCAACTCTACTGTTGCTGCATATGTGGAAAAGGAAGCTCTAAAAGTGGGCAAAGACCTGAGAATAGAGCAAAGCTATGAGGATCTTGAAGAACAATTTGAACCAGATGAAAAGTTCTTTTTTGATGCCATTATTCAGCTCAACCAAACAAACTGA KLNLVENLSGISGCTENHGRKETLVEFGEVDKSDDANSRYELLSFGKPQVNDGNVVVWRERRFNIGIWDIWPLVVDWLAGVRVKAIYHKQTADYFTPNLTSKSVSFPSQMGYGSRKISVRYLPAACAALSEDVSVSSSQFEDFSVTKATNINENKELKICIEVSGAKTRAIFDNVFNEMVDKAQPIPGFRRAKGGKTPNIPREILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIEQSYEDLEEQFEPDEKFFFDAIIQLNQTN
BLAST of Cp4.1LG12g09820 vs. Swiss-Prot
Match: TIG_CYAP8 (Trigger factor OS=Cyanothece sp. (strain PCC 8801) GN=tig PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.2e-07 Identity = 32/119 (26.89%), Postives = 66/119 (55.46%), Query Frame = 1
BLAST of Cp4.1LG12g09820 vs. Swiss-Prot
Match: TIG_THEEB (Trigger factor OS=Thermosynechococcus elongatus (strain BP-1) GN=tig PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06 Identity = 34/115 (29.57%), Postives = 60/115 (52.17%), Query Frame = 1
BLAST of Cp4.1LG12g09820 vs. Swiss-Prot
Match: TIG_SYNP2 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tig PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.2e-06 Identity = 28/112 (25.00%), Postives = 65/112 (58.04%), Query Frame = 1
BLAST of Cp4.1LG12g09820 vs. Swiss-Prot
Match: TIG_GLOVI (Trigger factor OS=Gloeobacter violaceus (strain PCC 7421) GN=tig PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.1e-06 Identity = 28/114 (24.56%), Postives = 66/114 (57.89%), Query Frame = 1
BLAST of Cp4.1LG12g09820 vs. TrEMBL
Match: A0A0A0KBW0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086150 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.6e-81 Identity = 162/202 (80.20%), Postives = 176/202 (87.13%), Query Frame = 1
BLAST of Cp4.1LG12g09820 vs. TrEMBL
Match: U5FVR2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s12910g PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.6e-57 Identity = 125/199 (62.81%), Postives = 154/199 (77.39%), Query Frame = 1
BLAST of Cp4.1LG12g09820 vs. TrEMBL
Match: A0A061EIP8_THECC (Transport, ribosome-binding, bacterial, putative isoform 2 OS=Theobroma cacao GN=TCM_019901 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 2.8e-57 Identity = 129/196 (65.82%), Postives = 150/196 (76.53%), Query Frame = 1
BLAST of Cp4.1LG12g09820 vs. TrEMBL
Match: D7T2D4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g00410 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.7e-54 Identity = 123/198 (62.12%), Postives = 145/198 (73.23%), Query Frame = 1
BLAST of Cp4.1LG12g09820 vs. TrEMBL
Match: A0A061EIA3_THECC (Transport, ribosome-binding, bacterial, putative isoform 1 OS=Theobroma cacao GN=TCM_019901 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.8e-53 Identity = 129/218 (59.17%), Postives = 150/218 (68.81%), Query Frame = 1
BLAST of Cp4.1LG12g09820 vs. TAIR10
Match: AT2G30695.1 (AT2G30695.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 162.2 bits (409), Expect = 4.7e-40 Identity = 89/154 (57.79%), Postives = 112/154 (72.73%), Query Frame = 1
BLAST of Cp4.1LG12g09820 vs. NCBI nr
Match: gi|449445672|ref|XP_004140596.1| (PREDICTED: uncharacterized protein LOC101211587 isoform X2 [Cucumis sativus]) HSP 1 Score: 310.8 bits (795), Expect = 2.3e-81 Identity = 162/202 (80.20%), Postives = 176/202 (87.13%), Query Frame = 1
BLAST of Cp4.1LG12g09820 vs. NCBI nr
Match: gi|659120111|ref|XP_008460019.1| (PREDICTED: uncharacterized protein LOC103498958 isoform X4 [Cucumis melo]) HSP 1 Score: 307.8 bits (787), Expect = 1.9e-80 Identity = 159/194 (81.96%), Postives = 172/194 (88.66%), Query Frame = 1
BLAST of Cp4.1LG12g09820 vs. NCBI nr
Match: gi|778711466|ref|XP_011656735.1| (PREDICTED: uncharacterized protein LOC101211587 isoform X1 [Cucumis sativus]) HSP 1 Score: 306.2 bits (783), Expect = 5.7e-80 Identity = 162/203 (79.80%), Postives = 176/203 (86.70%), Query Frame = 1
BLAST of Cp4.1LG12g09820 vs. NCBI nr
Match: gi|659120109|ref|XP_008460018.1| (PREDICTED: uncharacterized protein LOC103498958 isoform X3 [Cucumis melo]) HSP 1 Score: 303.1 bits (775), Expect = 4.8e-79 Identity = 159/195 (81.54%), Postives = 172/195 (88.21%), Query Frame = 1
BLAST of Cp4.1LG12g09820 vs. NCBI nr
Match: gi|659120107|ref|XP_008460017.1| (PREDICTED: uncharacterized protein LOC103498958 isoform X2 [Cucumis melo]) HSP 1 Score: 302.0 bits (772), Expect = 1.1e-78 Identity = 159/198 (80.30%), Postives = 172/198 (86.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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