Cp4.1LG08g00670 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAATCTTCCTCGTTTTGGTCGAACATGGAACCGTTTCTCTTCCCTGCCCCGCCCTGGCACGGCCCCACGGCTTGATGTTCCGCCGCCGGCTGCCGCGTCGGAGCCGGAAGTTTATCCACCGCCTCCGCGCACTGCCAATGTTCTTCAAACTTCTCCTATTAAAGAAAGGTCTCCTCGAATCCCATCTCCGGTTAGGAAATATCCCTCGCCTCCTACTTCTCCCAAATATAGGGCGGCTGCCCCCAGCACTTCGCCCCGCAAGCCACTATCTCCTCCTCCGACGTATAACCGTTACGACGGAGAACGGCGGACCAGTGCTTTAGCTTCTCCTAAAACGTTCAAAACTACCTATACCTCTCCGCCACGATCACCGGCGAAACATAAATATTCCACCTCCACTCTCCAAGCACCACTCTCTCCTCTGGCTCTGCCTAGCTTGGAGAAGAGACATGAACCTGAGCCTATGGTTCGACCCAGGAGCCCACCGGAGGTTAGTTCAATTATAATTTATATTTAATTTATTTTTATATACATTCTTGTCACTTTTCTTAATAAGAATATAATATAACAATTTAACCTTTCACTCAAAAATTTATGTTTCTTAATTAATAATTGAGCTATACTTTTTTTCTGCCAAGACATGGTACATTCTACTTTCTTAATTAATTAATATATATATATATATATATGTATGTATGTATGTATATGCATATAAAAAATGTAAGAGTCTAGTTCTTTTCGATCTTACAATCCACCTTCTTTGTGATCTAGTGTTCTCGCTAACATTCGTTCACTTTTTTAATTGACGTGGGACCCTCCCAATCTATCCCCTTCCATGCTCAACATTCTTTCTGGCACACTGTCTCGTGTCTACCCCCTTCCAATCGATGTGGGACTCCTCCCAATCCACCCCCTTTCAATCTCCCGTGTTTTGCTGGCACATTGCCTTATGTCCAACCCCTTTGGAGTTTAGGGTCCTCGTTGGTACATCACCAAGAGTGTTTTGTTCTCCTACCCAACCGATGTCGGATCTCACAATCCATTCTCTTTCGGGGCCTAGCATCCTCGTTGTCACTCGTTTCCTTCTCTAATCGATGTGGGACCCTCCTAATCCACTCTCTTCAAGGCCCAGCATCCTTGCTAGCACTCATTCCCTTCTCTAATCGATGTGGGACCATCTCAATCCACCCTCCTCAGGGCCCAGCATCCTCGCTGGCACTCGTTCCCTTCTCTAATCAATGTGAGACTCTCTCAATCCACTCCCTACGGGACCTGGTGTCTTTGCTGGCACACCGCCTCGTGTCGACCCCCCTTTAGGATTCAGCCTCCTCGCTAGCACATAGCTCGGTATCTGTCTCTGATACCAACTGCAACAGTTCAAACCCATCGCTAGCAGATACTGTCCTCTTTGAACTTTTTATTTCAAGTTTTCCCTCAAAGTTTTTAAAACGTGTCTACTAACAGAGGTTTCCACACCCTTATAAACAATGTTTTATTCTCCTTCCTAACAGATGCAGGATCTCAAAAAAAAAAAAAAAAAAACGTCTTAGTGTTATGATGTTATATTCTTAAACAGGTCCAGCAGAAATCGGTGCTTTACCAGAAGACGACTAGCGAGAAGCCTGCGAAAACCGACCACCGAGCATCGGAGTACAGCTCAGGCAAACCCCAGCAGAAGCAAACGCATCAGCAGCAAAGTGATGTTATAAACATCAAAGGAGAGAACGTAGGCGCCGTCATGCACATCACTCAATCATCTGATGCCACAGAAACCCACAAGAAAAAGCCAACCGTAAGCTACAGCAGCGAAAACGAGAAAGATTCAAACAAATCAAGCTCCAACATGCCTGGAAAATCGTTCATGAACAGCAATTTTCAAGGTGTCAACAACTCCATTCTCTACAATTCGTCTTTGAGCCACCGTGATCCAGGCCTGCACCTTGCTTTCACCAAGAAGCCCACCCATGCCGATTCTGTTCATGATTCCAGGCACTGA ATGGCAAATCTTCCTCGTTTTGGTCGAACATGGAACCGTTTCTCTTCCCTGCCCCGCCCTGGCACGGCCCCACGGCTTGATGTTCCGCCGCCGGCTGCCGCGTCGGAGCCGGAAGTTTATCCACCGCCTCCGCGCACTGCCAATGTTCTTCAAACTTCTCCTATTAAAGAAAGGTCTCCTCGAATCCCATCTCCGGTTAGGAAATATCCCTCGCCTCCTACTTCTCCCAAATATAGGGCGGCTGCCCCCAGCACTTCGCCCCGCAAGCCACTATCTCCTCCTCCGACGTATAACCGTTACGACGGAGAACGGCGGACCAGTGCTTTAGCTTCTCCTAAAACGTTCAAAACTACCTATACCTCTCCGCCACGATCACCGGCGAAACATAAATATTCCACCTCCACTCTCCAAGCACCACTCTCTCCTCTGGCTCTGCCTAGCTTGGAGAAGAGACATGAACCTGAGCCTATGGTTCGACCCAGGAGCCCACCGGAGAAATCGGTGCTTTACCAGAAGACGACTAGCGAGAAGCCTGCGAAAACCGACCACCGAGCATCGGAGTACAGCTCAGGCAAACCCCAGCAGAAGCAAACGCATCAGCAGCAAAGTGATGTTATAAACATCAAAGGAGAGAACGTAGGCGCCGTCATGCACATCACTCAATCATCTGATGCCACAGAAACCCACAAGAAAAAGCCAACCGTAAGCTACAGCAGCGAAAACGAGAAAGATTCAAACAAATCAAGCTCCAACATGCCTGGAAAATCGTTCATGAACAGCAATTTTCAAGGTGTCAACAACTCCATTCTCTACAATTCGTCTTTGAGCCACCGTGATCCAGGCCTGCACCTTGCTTTCACCAAGAAGCCCACCCATGCCGATTCTGTTCATGATTCCAGGCACTGA ATGGCAAATCTTCCTCGTTTTGGTCGAACATGGAACCGTTTCTCTTCCCTGCCCCGCCCTGGCACGGCCCCACGGCTTGATGTTCCGCCGCCGGCTGCCGCGTCGGAGCCGGAAGTTTATCCACCGCCTCCGCGCACTGCCAATGTTCTTCAAACTTCTCCTATTAAAGAAAGGTCTCCTCGAATCCCATCTCCGGTTAGGAAATATCCCTCGCCTCCTACTTCTCCCAAATATAGGGCGGCTGCCCCCAGCACTTCGCCCCGCAAGCCACTATCTCCTCCTCCGACGTATAACCGTTACGACGGAGAACGGCGGACCAGTGCTTTAGCTTCTCCTAAAACGTTCAAAACTACCTATACCTCTCCGCCACGATCACCGGCGAAACATAAATATTCCACCTCCACTCTCCAAGCACCACTCTCTCCTCTGGCTCTGCCTAGCTTGGAGAAGAGACATGAACCTGAGCCTATGGTTCGACCCAGGAGCCCACCGGAGAAATCGGTGCTTTACCAGAAGACGACTAGCGAGAAGCCTGCGAAAACCGACCACCGAGCATCGGAGTACAGCTCAGGCAAACCCCAGCAGAAGCAAACGCATCAGCAGCAAAGTGATGTTATAAACATCAAAGGAGAGAACGTAGGCGCCGTCATGCACATCACTCAATCATCTGATGCCACAGAAACCCACAAGAAAAAGCCAACCGTAAGCTACAGCAGCGAAAACGAGAAAGATTCAAACAAATCAAGCTCCAACATGCCTGGAAAATCGTTCATGAACAGCAATTTTCAAGGTGTCAACAACTCCATTCTCTACAATTCGTCTTTGAGCCACCGTGATCCAGGCCTGCACCTTGCTTTCACCAAGAAGCCCACCCATGCCGATTCTGTTCATGATTCCAGGCACTGA MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAAASEPEVYPPPPRTANVLQTSPIKERSPRIPSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRYDGERRTSALASPKTFKTTYTSPPRSPAKHKYSTSTLQAPLSPLALPSLEKRHEPEPMVRPRSPPEKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQTHQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVHDSRH
BLAST of Cp4.1LG08g00670 vs. TrEMBL
Match: A0A0A0L5T3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 4.0e-102 Identity = 216/309 (69.90%), Postives = 245/309 (79.29%), Query Frame = 1
BLAST of Cp4.1LG08g00670 vs. TrEMBL
Match: A0A0A0L320_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 3.7e-23 Identity = 120/316 (37.97%), Postives = 160/316 (50.63%), Query Frame = 1
BLAST of Cp4.1LG08g00670 vs. TrEMBL
Match: A0A0A0L3R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119280 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.4e-17 Identity = 85/228 (37.28%), Postives = 121/228 (53.07%), Query Frame = 1
BLAST of Cp4.1LG08g00670 vs. TrEMBL
Match: A0A0A0L8G8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119310 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.2e-15 Identity = 105/310 (33.87%), Postives = 145/310 (46.77%), Query Frame = 1
BLAST of Cp4.1LG08g00670 vs. TrEMBL
Match: G7L524_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_7g117980 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.8e-10 Identity = 117/363 (32.23%), Postives = 158/363 (43.53%), Query Frame = 1
BLAST of Cp4.1LG08g00670 vs. TAIR10
Match: AT2G46630.1 (AT2G46630.1 unknown protein) HSP 1 Score: 48.5 bits (114), Expect = 8.3e-06 Identity = 84/295 (28.47%), Postives = 120/295 (40.68%), Query Frame = 1
BLAST of Cp4.1LG08g00670 vs. NCBI nr
Match: gi|659074888|ref|XP_008437849.1| (PREDICTED: microtubule-associated protein RP/EB family member 1-like [Cucumis melo]) HSP 1 Score: 384.8 bits (987), Expect = 1.4e-103 Identity = 216/309 (69.90%), Postives = 249/309 (80.58%), Query Frame = 1
BLAST of Cp4.1LG08g00670 vs. NCBI nr
Match: gi|449432016|ref|XP_004133796.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus]) HSP 1 Score: 379.4 bits (973), Expect = 5.8e-102 Identity = 216/309 (69.90%), Postives = 245/309 (79.29%), Query Frame = 1
BLAST of Cp4.1LG08g00670 vs. NCBI nr
Match: gi|659074890|ref|XP_008437851.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo]) HSP 1 Score: 119.8 bits (299), Expect = 8.3e-24 Identity = 121/309 (39.16%), Postives = 158/309 (51.13%), Query Frame = 1
BLAST of Cp4.1LG08g00670 vs. NCBI nr
Match: gi|449432018|ref|XP_004133797.1| (PREDICTED: atherin-like [Cucumis sativus]) HSP 1 Score: 117.1 bits (292), Expect = 5.4e-23 Identity = 120/316 (37.97%), Postives = 160/316 (50.63%), Query Frame = 1
BLAST of Cp4.1LG08g00670 vs. NCBI nr
Match: gi|449432014|ref|XP_004133795.1| (PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus]) HSP 1 Score: 97.8 bits (242), Expect = 3.4e-17 Identity = 85/228 (37.28%), Postives = 121/228 (53.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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