Cp4.1LG07g07710 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTGTTAGTGTCATAATCACACTTTTCTAATGACGGGACAACGTTGGTGTGTGACAGGTGTTCTCACCTCACGAGCAAGTCAATTGTGCAAAACTTGGGCTTTATGGACAATCTCAATGTTGGATTTATAAAACGTGAGAGAGAAAATGAGTTGAATTTCGCCGGTTGCATTAAAACATATAGGCAAGAGAGTTTACGAACTCTTTGTTGGTGGAGGTTTGACAATTACTTAGTCTTCATGGTATGATCGAGGATGGCTTGAGTATGCGGCCTTAAGCGACATTGCTGCGGACAAGCATACCCGAGGCACTTAGTACATGTAGGAGGCTGGTTGTGCACTCGTCTCCAAAGTCCACACTCCTTTCTTCTGCACCCACATTATCTGTGAGATCCCGAGAGGGGAGCGAAACATTCTTTAAAAGGGCGTGGAAACCTCTCTCTATCAAAGTGGATAACATATGCTAGCGATAGACTTGAACTGTTACATCATGTCTTGATAATTGAATTTGCAAGGATTAAATTTTTTTTTAAAATTTTTTATTAACTCATTTCAAATATTTATAATTTAATTTTAGTTAAATTCATAAATATATCCTTAAATTTTGTATTTTATCTTAAAAATATTTTAATCTTTTTTGAAAATTTCAATAATATTCATAAAACTTCAAAAATCGTTATGAATATTCATGAGATGGATTTTTCGTCGGAGATGTGAGCGGTGGTTCGTCTGAATTCCGACGATCTTTACGGCCATCTGAACCGAGAATCGTTTCATGATGGAATTGAACTCTCTTGTTGCAGCGGTAGCAAATCCGCACTGCTTTCCGACAAATTTGAAACAGAAACGCCCAATTTTGTTCCAGCAGAGACGCCCCGCAGGTCGAGCGTCGGCTCGTAAGGTACGCCTCAATCACGGAAGTAATTTAGCAGTTTGAATTCAGATTCTGATGATTAATTTTCAGTTTCTTCCGCTTTTATCGTCATTTGTTGGTTTGTGGTTAGATAAAATTTGGGGGGAAATGGAAAATTGTGATAAATACGCGGATGTTATATTATCATGTTATCCAGAACTCGAATGATAATTTGTGTGTATGAACTGCTGTGATGATTGATTGTTAATTTAGATTAAGCCTAAGTTCTGAAGAATCGGTTCTGAATGTGTTGTCTTGAAACTTGGAGATGATTAATTGTATGAACTGTTAAGTAGTCTCATCAGGGACTTTGATGTTACTAGGGATTGTTCTTGTAAATAAAATTGAATGCAAAAGGTCCTCTTTGAAGTGGCTTGCTCATGATAAGATGAGGGTTTGAGGCTGTGGGTGGATGCCAGGTTAAATCTCCTTTAGGACCATGTTAGGCTAGTGGCTTGGACCTTCGTTCCAATGTTGAGTTAGAGTGAATCTAATCCTTTGATTTATTCTTGACGTTTCAAGATTGATGATAACTCTCTGCAAGAACTTAGCAGGGCATAGTTTAGGCATTATCAATACTTGAAATTAAAATCACGTTCTTTCATTTTCAAGTAAGATTTAGATCAGTTTGGGTTTAGTTCTTGATCATGTTTAGAGGTAAGAGCCCTAGCCCTTGGAAAGACCTCACTAATTGGCTTTCGTTGTTATCTGATAATTATTTGAAGTTGGGGATCGGTCAAGTCACAGATCTTTTTCTGGAAGAACAATGTGTGGGGACTGTGTTCCTTGTGGAGTTTGTCTAGAATGTACTTGTTGATATTACTCTTCAGTGACCTATGGCTATGGCTATGGCTATAGCTATGGCTTTTACGGGGGAAATTATTGCATGAAATACATTATTCAAGAGAGATGAGATTTATGCAACTGCTAGCCGATATTGTCCTCTTTGAGCTTTCCCTTGAAGTTTTTAAAACCCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTTGTTCTCCTCCCCAACCAATGTGGGATCTCACAATCCATCCCCTTCGGGGCCCAGCATCCTTGCTGGCACACCGCCTCGTGTCCACCCCCCTTCGGGACTCAGTCTCCTCGCTGGCATGTTGCCCAGTGTCTGGCTCTGATACCATTTGGAACGGCCCAAGCCTACTGCTAGCAGATATTGTCCTCTTTGGGCTTTCCTTTTTGGGTTTCTTCTCAAGGTTGTTAAAACTCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTTGTTCTCCTCCCCAACCAATGTGGGATCTCACAATCCATCCCCTTCGGGGCCCAGCATCCTTGCTGGCACACCGCCTCGTGTCCACCCCCCTTCGGGACTCAGTCTCCTCGCTGGCATGTTGCCCAGTGTCTGGCTCTGATACCATTTGGAACGGCCCAAGCCTACTGCTAGCAGATATTGTCCTCTTTGGGCTTTCCTTTTTGGGTTTCTTCTCAAGGTTGTTAAAACTCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTCCGTTCTCCTCTCCAACTGACATGGGATCTCACAATTTATGAGTGGACAGATAACGCATTCGATTCAAGGAAAATACTCTGAGATGAAGGCATATTAACAAAAGGACTTACATATCACAATTATTTCTTGGGGAAATCCGTACAGCTAATGGAGATCTGTACAATTTGGAGCTTTAAAGTAACAAAACAGAAATAGAGTGATTTATCAACTGATGAACATGTTATAGATATTCACACTTCCCTAATTTTGTTTATTTTATACGCAATGTACTTAGGATAGATACTCCGGCAGAACAAAGAAAAAGGAAGCTTTGCTGGCGATGATTTTTCTATCAACCATTCCCAAGTGATTGAGAAATTGAGCCAAAGAAGAACGCCTGTTTTAGCTCAAGAGATTTTCTTGGAGCTGAAACCTGAAGAATTTCCATTAAACAACTCGACGTTGTCTTCTCTTATGGTACGCTACATAGATGGTGGTCTTCTCCTCCAAGCAGAAGCAATTTGGGAAGAAATGTTAAACAGTTGTTTCGTGCCTTCCGTTTTAGTAATTTCAAAGTTACTTAACACATACGGAAAGATGAGACGCTTCGATGATATAATTAAAGTTCTGGATCAGGTAAAGATAAGGTATTTACACTTACTCCCTGAGGCATACTCATTAGCCATATCATGTTTTGGGAAGCATGGTCAATTAGAATTGATGGAAAACACTTTGAGGGAAATGGTTTCCAGTGGTGTTCCAGTTGATTCCCGTACAGGAAATTCCTTTATTGTATACTACAGCATTTTTGGTTCTTTGATGGAGATGGAAACCGCCTATGGCCGCCTTAAAAGGTCTCGATTTCTAATCGAGAAGGAAGGCATCCTGGCAATGGCGTTCGCCTACATAAGGGAAAGAAAATTTTACAGATTAGGGGAATTTCTTAGGGATGTTGGTCTTAGAAGGAAAAACGTGGGGAATCTGTTATGGAATCTTCTACTTTTATCTTATGCTGCAAATTTCAAAATGAAAAGCTTGCAGCGTGAGTTTCTGGCAATGGTTGAAGCTGGATTTAATCCGGATATTACAACGTTTAATATTAGAGCTGTGGCATTTTCAAGAATGGATTTGTTATGGGATCTTCATCTTAGCCTTGAACATATGAAACACATGAAGATCGAACCCGATCTCGTGTCGTACGGTTGTGTTGTTGATGCATATGTAGATAGAAGACTTGGAAGGAATTTGGAATTCGTTTTGAGCAAAATGAATCCAGATCAACCACCAATATCATTAACTGATCCGTTTGTTTTTGAGGCATTGGGTAAAGGAGATTTCCACATGAGCTCTGAGGCGTTCATGCAGTTCCAGAAGCAGAAGAAATGGACTTACAGAGAGTTGATATCATTGTATCTGAAAAAGCAACACAGAAGAGATCAAGTCTTTTGGAATTACTAG ATGGCGGTAGCAAATCCGCACTGCTTTCCGACAAATTTGAAACAGAAACGCCCAATTTTGTTCCAGCAGAGACGCCCCGCAGGTCGAGCGTCGGCTCGTAAGATGGAAACCGCCTATGGCCGCCTTAAAAGGTCTCGATTTCTAATCGAGAAGGAAGGCATCCTGGCAATGGCGTTCGCCTACATAAGGGAAAGAAAATTTTACAGATTAGGGGAATTTCTTAGGGATGTTGGTCTTAGAAGGAAAAACGTGGGGAATCTGTTATGGAATCTTCTACTTTTATCTTATGCTGCAAATTTCAAAATGAAAAGCTTGCAGCGTGAGTTTCTGGCAATGGTTGAAGCTGGATTTAATCCGGATATTACAACGTTTAATATTAGAGCTGTGGCATTTTCAAGAATGGATTTGTTATGGGATCTTCATCTTAGCCTTGAACATATGAAACACATGAAGATCGAACCCGATCTCGTGTCGTACGGTTGTGTTGTTGATGCATATGTAGATAGAAGACTTGGAAGGAATTTGGAATTCGTTTTGAGCAAAATGAATCCAGATCAACCACCAATATCATTAACTGATCCGTTTGTTTTTGAGGCATTGGGTAAAGGAGATTTCCACATGAGCTCTGAGGCGTTCATGCAGTTCCAGAAGCAGAAGAAATGGACTTACAGAGAGTTGATATCATTGTATCTGAAAAAGCAACACAGAAGAGATCAAGTCTTTTGGAATTACTAG ATGGCGGTAGCAAATCCGCACTGCTTTCCGACAAATTTGAAACAGAAACGCCCAATTTTGTTCCAGCAGAGACGCCCCGCAGGTCGAGCGTCGGCTCGTAAGATGGAAACCGCCTATGGCCGCCTTAAAAGGTCTCGATTTCTAATCGAGAAGGAAGGCATCCTGGCAATGGCGTTCGCCTACATAAGGGAAAGAAAATTTTACAGATTAGGGGAATTTCTTAGGGATGTTGGTCTTAGAAGGAAAAACGTGGGGAATCTGTTATGGAATCTTCTACTTTTATCTTATGCTGCAAATTTCAAAATGAAAAGCTTGCAGCGTGAGTTTCTGGCAATGGTTGAAGCTGGATTTAATCCGGATATTACAACGTTTAATATTAGAGCTGTGGCATTTTCAAGAATGGATTTGTTATGGGATCTTCATCTTAGCCTTGAACATATGAAACACATGAAGATCGAACCCGATCTCGTGTCGTACGGTTGTGTTGTTGATGCATATGTAGATAGAAGACTTGGAAGGAATTTGGAATTCGTTTTGAGCAAAATGAATCCAGATCAACCACCAATATCATTAACTGATCCGTTTGTTTTTGAGGCATTGGGTAAAGGAGATTTCCACATGAGCTCTGAGGCGTTCATGCAGTTCCAGAAGCAGAAGAAATGGACTTACAGAGAGTTGATATCATTGTATCTGAAAAAGCAACACAGAAGAGATCAAGTCTTTTGGAATTACTAG MAVANPHCFPTNLKQKRPILFQQRRPAGRASARKMETAYGRLKRSRFLIEKEGILAMAFAYIRERKFYRLGEFLRDVGLRRKNVGNLLWNLLLLSYAANFKMKSLQREFLAMVEAGFNPDITTFNIRAVAFSRMDLLWDLHLSLEHMKHMKIEPDLVSYGCVVDAYVDRRLGRNLEFVLSKMNPDQPPISLTDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRDQVFWNY
BLAST of Cp4.1LG07g07710 vs. Swiss-Prot
Match: PP263_ARATH (Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana GN=At3g42630 PE=2 SV=2) HSP 1 Score: 304.7 bits (779), Expect = 9.2e-82 Identity = 142/214 (66.36%), Postives = 179/214 (83.64%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. Swiss-Prot
Match: PP310_ARATH (Pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Arabidopsis thaliana GN=At4g14190 PE=2 SV=2) HSP 1 Score: 72.8 bits (177), Expect = 5.9e-12 Identity = 61/208 (29.33%), Postives = 88/208 (42.31%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. TrEMBL
Match: A0A0A0LMJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G070240 PE=4 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 2.4e-97 Identity = 174/188 (92.55%), Postives = 183/188 (97.34%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. TrEMBL
Match: B9RDM7_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1614490 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 9.9e-91 Identity = 155/214 (72.43%), Postives = 192/214 (89.72%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. TrEMBL
Match: M5XQ40_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006191mg PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 9.9e-91 Identity = 162/214 (75.70%), Postives = 192/214 (89.72%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. TrEMBL
Match: A0A067K0T9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14439 PE=4 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 1.3e-90 Identity = 161/214 (75.23%), Postives = 191/214 (89.25%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. TrEMBL
Match: B9N840_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0018s14360g PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 2.2e-90 Identity = 161/214 (75.23%), Postives = 186/214 (86.92%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. TAIR10
Match: AT3G42630.1 (AT3G42630.1 Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 304.7 bits (779), Expect = 5.2e-83 Identity = 142/214 (66.36%), Postives = 179/214 (83.64%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. TAIR10
Match: AT4G14190.1 (AT4G14190.1 Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 72.8 bits (177), Expect = 3.3e-13 Identity = 61/208 (29.33%), Postives = 88/208 (42.31%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. TAIR10
Match: AT2G18940.1 (AT2G18940.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 52.0 bits (123), Expect = 6.1e-07 Identity = 31/101 (30.69%), Postives = 48/101 (47.52%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. TAIR10
Match: AT2G26790.1 (AT2G26790.1 Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 49.3 bits (116), Expect = 3.9e-06 Identity = 39/169 (23.08%), Postives = 72/169 (42.60%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. NCBI nr
Match: gi|778667690|ref|XP_011648974.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like [Cucumis sativus]) HSP 1 Score: 401.7 bits (1031), Expect = 8.9e-109 Identity = 194/211 (91.94%), Postives = 206/211 (97.63%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. NCBI nr
Match: gi|659069563|ref|XP_008450656.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like [Cucumis melo]) HSP 1 Score: 401.4 bits (1030), Expect = 1.2e-108 Identity = 196/214 (91.59%), Postives = 207/214 (96.73%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. NCBI nr
Match: gi|700206087|gb|KGN61206.1| (hypothetical protein Csa_2G070240 [Cucumis sativus]) HSP 1 Score: 363.2 bits (931), Expect = 3.5e-97 Identity = 174/188 (92.55%), Postives = 183/188 (97.34%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. NCBI nr
Match: gi|470131016|ref|XP_004301396.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g42630 [Fragaria vesca subsp. vesca]) HSP 1 Score: 345.1 bits (884), Expect = 9.8e-92 Identity = 163/214 (76.17%), Postives = 193/214 (90.19%), Query Frame = 1
BLAST of Cp4.1LG07g07710 vs. NCBI nr
Match: gi|694366990|ref|XP_009362023.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g42630 isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 345.1 bits (884), Expect = 9.8e-92 Identity = 164/214 (76.64%), Postives = 191/214 (89.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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