Cucsa.179000 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.179000
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPentatricopeptide repeat-containing family protein
Locationscaffold01227 : 1394667 .. 1397990 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGAAAAAAGGGGAAAAAAATCATTAGTTTAATTCGTGGGTTCAGAAAAGGCCACGTCGCCTTAGGAAATTTTTGCTTCTTTGCTGGCCGTTTGTGGCGGTGGGATACACGGCCAAATTTTCCGGCGAAGTGGTCGCTCTTCTTCGTTCTCTCGGCACTTTTTTCCCAACAGACAATCCTTTCCACATTTTGAAGGTGAAATTTCTCTTTCTGACCTTGCTTTAATCATATAATGAAACTTGATACTTCACGTTCTACTACTTTTTCCACTAATTTCATTTTGGATATGCTTTATCACTTCCATGGCCGGAATGTTTTTCAAGTTGTTTTGCAGTTCGAGATCATTTACACTCCTACCTGTACCTTTGATCTTGTTTGGCATTCTTGTTCTCTGCAATCCACTGTGGAGTTCATAAATCAACCCCCACCCCTCTTTCTCTTTTACCCAAATGTACATCTCTCAGGGAGTTCATGCAAATTCAAGCATGTATAATTTAAACCAATCTTCAGAATCACACCTCTGTTCTCACCAAGCTCATTAATTTCTTCACGCTCAACCGCACAACTCTGTCCATGGACCACGCCCACCATCTGTTCGATCAAATTTCTGAAAAGTATAGTGTTCTGTTTTACATAATGGCACGTCATTATGCTCACTCTGATTCTCCATATCCTGCCTTTTCTCTTTTTGATCTAGTCTTGTGCTCTAACTATCGGATGAACGTATTTCTACATCACCAACAGATGAGGTGTTTTGCTTCAGGACTCATTTTCTTAAAAAATGTACTACATCACTTTTAGTTTTTAATTATTATTATTGACAATGTGAGGAAGGGATCCAACGTCTAACGTCCAGATTATTAATATATAGTCGAGCTAGGCTCATTTTGACATCACTTTTAATTAATATACAGCCGGAAACGATACTCTAGTACTCTGTGCTTTTAATAGGCTTGTCTCCGTTAAATATACAGCCGGAAACTTTATTTGACTAAAGTTTGGTTTTGTCGATTACAATTTCACTAGGAATGAAATAATGAATGCTCAAAAGGATTTTCCAACGGAGGTGTGGGCAGTGGTTTGTCTGGTTTTCGTGATCTTTCCGGCTGTTTGAACTGAGAATCATTCCACCGTGAAGATGGGCTTTCTTGTCACAATGGTGGCAAATTCATACTGCTTTCCAAGAGACTTCAAACGGGAACGCTCAATTTTGTCCCATCAGAGACACGCTGCATGTCGAGCTTCATCTTGTAAGGTATGCCCCATATCACTCAAAAGTCTATGAAAGGTTGGAATTCGGATTATGCTGACAATTTTCCCCCCTCTTTCATCATCATTTGTTGGTTTCTGGTTTCTGGTTTATTTTTTAAGGAAAGAAAACCATTTATTTATATAACGAAATGAGTTTAATGCTAAAAGATACAAGAACAATAATTAAAGACAAATATATGAAAGGATAGAATTGTGAGAGATATGCGAGCATTATCTCATTATTGTTTTAAAGAATTTGAATGAGAATATCGCATGTATGTGCTGTTGTTATGATTGATTGTTAATGTAGATTAAGTAACGTTCAGAAGAATGAAAGAGTGCTTGAAAATAAAACAAACTAGTGGGTCGTCTTAACATTCTTGTTGATGTCAGAGGGAGGAACCAAGACCCTTGGGAAGACCTCACTAGCTTTGGCTTCCGTTATTAACCTAGCAATTACTTTTGAAGTTGAAGATGGGTCAAGTCACTGATCTAGTGATCTGTTTCTGGAAGAACAATGTGTATGGGCTATTATGCTCCTTTGGAGTTTCTCTAGGATGTACTTGTTGATATTACTCATCTTGGACCTATTGCTATGGTTTTTATTTTACTGGGAAAAACTGTTGCTTGAAATGCATTATTCAAAAAAGGCAGGATATTCATGAGTGGACACTGGACAGATATAGCATACTCAATTTGAAGTGAAATGCCCTAAGAAAATGACATATTAACCAGAAAAAAAAAACAATGTCGTACTTATGACAACTATTAGACCCTTAAAATGATAAAATGGAAATTAGAGTGATTTCTTTTCTGATGTTTATCTTAAAGAGTTTCGCTATCTTAATTTTTGCTTTTTCTTAATGCAATGTACCTATGCTAGATATTCCAGCAGCACAATGAAGGAAGTTCTGTCGATGACAGTTTTAATATTAACAATTCTCAAGTGATTAAAAAATTGAGCCGAAGAAGAATGCCTATTTTAGCAAAAGAGATTTTCTTGGAGCTGAAGTCTGAAGGTTTTCCTCTAAACAACTCTACGTTGTCCACTATTATGGTACACTACATAGATGATGGTTCTCCTCTCCAAGCACAAGCAATGTGGGAAGAAATGTTAAACAGTTGTTTCGAACCTTCTGTTCAAGTAATTTCAAAGTTATTTAACGCTTATGGAAAGATGGGACACTTTGATTATATAACTAAAGTTCTAGACCAGGTAAAGTTAAGGTATTCACACTTACTGCCTGAGGCATACTCACTAGCCATATCTTGTTTCGGGAAGCACAAACAACTAGAATTGATGGAAAGTACATTGAGGGAAATGGTTTCTAGTGGTTTTACAGTTAATTCTGCTACTGGAAATTCTTTTATTATATACTACAGCATGTTTGGTTCTTTAGTAGAGATGGAAACTGCCTACGGTCGTCTTAAAAGGTCAAGATTTCTAATTGAGAAGAAAGGAATCATGGCAATGGCATTTGCCTACATAAGGAAAAGAAAATTCTACAGATTAGGTGAATTCCTCAGGGATGTTGGTCTTGGAAGGAAAAATGTGGGGAATCTTTTATGGAATCTTCTACTTCTATCTTATGCTGCCAATTTTAAAATGAAAAGTTTGCAGCGAGAATTTCTACAAATGGTTGACGCTGGATTCAATCCAGATCTTACAACATTTAACATTAGAGCTCTAGCATTTTCAAGAATGGATTTGTTATGGGATCTTCATCTTAGCCTTGAACACATGAAGCATATGAATATTGAACCCGATCTTGTGACCTACGGTTGTGTTGTTGATGCTTATGTCGATCGAAGACTTGGAAGAAATTTGGAATTCATTTTGAGCAAAATGAATCCAGATCAACCTCCAGTATCATTAACAGACTCTTTCGTTTTCGAGGCATTGGGTAAAGGAGACTTCCACATGAGTTCTGAGGCGTTCATGCAATTTCGAAAGCAGAAGAAATGGACTTATAGAGAATTAATATCATTGTATCTGAAAAAGCACCACAGGAGAAACCAAGTCTTTTGGAATTACTAACCCAGAACGTTATTTGATAACGTCTTCTCCCAG

mRNA sequence

AAAAGAAAAAAGGGGAAAAAAATCATTAGTTTAATTCGTGGGTTCAGAAAAGGCCACGTCGCCTTAGGAAATTTTTGCTTCTTTGCTGGCCGTTTGTGGCGGTGGGATACACGGCCAAATTTTCCGGCGAAGTGGTCGCTCTTCTTCGTTCTCTCGGCACTTTTTTCCCAACAGACAATCCTTTCCACATTTTGAAGGAATGAAATAATGAATGCTCAAAAGGATTTTCCAACGGAGGTGTGGGCAGTGGTTTGTCTGGTTTTCGTGATCTTTCCGGCTGTTTGAACTGAGAATCATTCCACCGTGAAGATGGGCTTTCTTGTCACAATGGTGGCAAATTCATACTGCTTTCCAAGAGACTTCAAACGGGAACGCTCAATTTTGTCCCATCAGAGACACGCTGCATGTCGAGCTTCATCTTGTAAGATATTCCAGCAGCACAATGAAGGAAGTTCTGTCGATGACAGTTTTAATATTAACAATTCTCAAGTGATTAAAAAATTGAGCCGAAGAAGAATGCCTATTTTAGCAAAAGAGATTTTCTTGGAGCTGAAGTCTGAAGGTTTTCCTCTAAACAACTCTACGTTGTCCACTATTATGGTACACTACATAGATGATGGTTCTCCTCTCCAAGCACAAGCAATGTGGGAAGAAATGTTAAACAGTTGTTTCGAACCTTCTGTTCAAGTAATTTCAAAGTTATTTAACGCTTATGGAAAGATGGGACACTTTGATTATATAACTAAAGTTCTAGACCAGGTAAAGTTAAGGTATTCACACTTACTGCCTGAGGCATACTCACTAGCCATATCTTGTTTCGGGAAGCACAAACAACTAGAATTGATGGAAAGTACATTGAGGGAAATGGTTTCTAGTGGTTTTACAGTTAATTCTGCTACTGGAAATTCTTTTATTATATACTACAGCATGTTTGGTTCTTTAGTAGAGATGGAAACTGCCTACGGTCGTCTTAAAAGGTCAAGATTTCTAATTGAGAAGAAAGGAATCATGGCAATGGCATTTGCCTACATAAGGAAAAGAAAATTCTACAGATTAGGTGAATTCCTCAGGGATGTTGGTCTTGGAAGGAAAAATGTGGGGAATCTTTTATGGAATCTTCTACTTCTATCTTATGCTGCCAATTTTAAAATGAAAAGTTTGCAGCGAGAATTTCTACAAATGGTTGACGCTGGATTCAATCCAGATCTTACAACATTTAACATTAGAGCTCTAGCATTTTCAAGAATGGATTTGTTATGGGATCTTCATCTTAGCCTTGAACACATGAAGCATATGAATATTGAACCCGATCTTGTGACCTACGGTTGTGTTGTTGATGCTTATGTCGATCGAAGACTTGGAAGAAATTTGGAATTCATTTTGAGCAAAATGAATCCAGATCAACCTCCAGTATCATTAACAGACTCTTTCGTTTTCGAGGCATTGGGTAAAGGAGACTTCCACATGAGTTCTGAGGCGTTCATGCAATTTCGAAAGCAGAAGAAATGGACTTATAGAGAATTAATATCATTGTATCTGAAAAAGCACCACAGGAGAAACCAAGTCTTTTGGAATTACTAACCCAGAACGTTATTTGATAACGTCTTCTCCCAG

Coding sequence (CDS)

ATGGGCTTTCTTGTCACAATGGTGGCAAATTCATACTGCTTTCCAAGAGACTTCAAACGGGAACGCTCAATTTTGTCCCATCAGAGACACGCTGCATGTCGAGCTTCATCTTGTAAGATATTCCAGCAGCACAATGAAGGAAGTTCTGTCGATGACAGTTTTAATATTAACAATTCTCAAGTGATTAAAAAATTGAGCCGAAGAAGAATGCCTATTTTAGCAAAAGAGATTTTCTTGGAGCTGAAGTCTGAAGGTTTTCCTCTAAACAACTCTACGTTGTCCACTATTATGGTACACTACATAGATGATGGTTCTCCTCTCCAAGCACAAGCAATGTGGGAAGAAATGTTAAACAGTTGTTTCGAACCTTCTGTTCAAGTAATTTCAAAGTTATTTAACGCTTATGGAAAGATGGGACACTTTGATTATATAACTAAAGTTCTAGACCAGGTAAAGTTAAGGTATTCACACTTACTGCCTGAGGCATACTCACTAGCCATATCTTGTTTCGGGAAGCACAAACAACTAGAATTGATGGAAAGTACATTGAGGGAAATGGTTTCTAGTGGTTTTACAGTTAATTCTGCTACTGGAAATTCTTTTATTATATACTACAGCATGTTTGGTTCTTTAGTAGAGATGGAAACTGCCTACGGTCGTCTTAAAAGGTCAAGATTTCTAATTGAGAAGAAAGGAATCATGGCAATGGCATTTGCCTACATAAGGAAAAGAAAATTCTACAGATTAGGTGAATTCCTCAGGGATGTTGGTCTTGGAAGGAAAAATGTGGGGAATCTTTTATGGAATCTTCTACTTCTATCTTATGCTGCCAATTTTAAAATGAAAAGTTTGCAGCGAGAATTTCTACAAATGGTTGACGCTGGATTCAATCCAGATCTTACAACATTTAACATTAGAGCTCTAGCATTTTCAAGAATGGATTTGTTATGGGATCTTCATCTTAGCCTTGAACACATGAAGCATATGAATATTGAACCCGATCTTGTGACCTACGGTTGTGTTGTTGATGCTTATGTCGATCGAAGACTTGGAAGAAATTTGGAATTCATTTTGAGCAAAATGAATCCAGATCAACCTCCAGTATCATTAACAGACTCTTTCGTTTTCGAGGCATTGGGTAAAGGAGACTTCCACATGAGTTCTGAGGCGTTCATGCAATTTCGAAAGCAGAAGAAATGGACTTATAGAGAATTAATATCATTGTATCTGAAAAAGCACCACAGGAGAAACCAAGTCTTTTGGAATTACTAA

Protein sequence

MGFLVTMVANSYCFPRDFKRERSILSHQRHAACRASSCKIFQQHNEGSSVDDSFNINNSQVIKKLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPDQPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVFWNY*
Homology
[Close]
BLAST of Cucsa.179000 vs. Swiss-Prot
Match: PP263_ARATH (Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana GN=At3g42630 PE=2 SV=2)

HSP 1 Score: 442.6 bits (1137), Expect = 4.9e-123
Identity = 213/368 (57.88%), Postives = 281/368 (76.36%), Query Frame = 1 

Query: 56  INNSQVIKKLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEE 115
           ++ + +++ LS+RR+P +A EIFL+ KS     N  TL  +M+ + ++G  L+A+ +W+E
Sbjct: 48  VDYAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDE 107

Query: 116 MLNSCFEPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQ 175
           ++NSCF P V V+SKL +AY + G FD + K+   V  R+S LLP   SLAISCFGK+ Q
Sbjct: 108 IINSCFVPDVFVVSKLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFGKNGQ 167

Query: 176 LELMESTLREMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMA 235
           LELME  + EM S G  + + T N  + YYS FGSL +ME AYGR+K+   +IE++ I A
Sbjct: 168 LELMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEEEIRA 227

Query: 236 MAFAYIRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAG 295
           +  AY+++RKFYRL EFL DVGLGR+N+GN+LWN +LLSYAA+FKMKSLQREF+ M+DAG
Sbjct: 228 VVLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGMLDAG 287

Query: 296 FNPDLTTFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLE 355
           F+PDLTTFNIRALAFSRM L WDLHL+LEHM+ +NI PDLVT+GCVVDAY+D+RL RNLE
Sbjct: 288 FSPDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLARNLE 347

Query: 356 FILSKMNPDQPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHR 415
           F+ ++MN D  P+ LTD   FE LGKGDFH+SSEA ++F  +K WTYR+LI +YLKK  R
Sbjct: 348 FVYNRMNLDDSPLVLTDPLAFEVLGKGDFHLSSEAVLEFSPRKNWTYRKLIGVYLKKKLR 407

Query: 416 RNQVFWNY 424
           R+Q+FWNY
Sbjct: 408 RDQIFWNY 415

[Close]
BLAST of Cucsa.179000 vs. Swiss-Prot
Match: PP163_ARATH (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.6e-09
Identity = 66/330 (20.00%), Postives = 125/330 (37.88%), Query Frame = 1 

Query: 61  VIKKLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSC 120
           V  K+ R    IL   +  E++S+G   +  T ST++     +G   +A+  + E+ +  
Sbjct: 254 VFGKMGRSWRKILG--VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCG 313

Query: 121 FEPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELME 180
           +EP     + L   +GK G +     VL +++          Y+  ++ + +    +   
Sbjct: 314 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAA 373

Query: 181 STLREMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAY 240
             +  M   G   N+ T  + I  Y   G   E    +  +K +  +       A+    
Sbjct: 374 GVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL 433

Query: 241 IRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDL 300
            +K +   + + L D+     +     WN +L         K + R F +M   GF PD 
Sbjct: 434 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDR 493

Query: 301 TTFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSK 360
            TFN    A+ R     D       M        + TY  +++A   +   R+ E ++S 
Sbjct: 494 DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 553

Query: 361 M-NPDQPPVSLTDSFVFEALGKGDFHMSSE 390
           M +    P   + S + +   KG  ++  E
Sbjct: 554 MKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581


HSP 2 Score: 59.7 bits (143), Expect = 9.0e-08
Identity = 63/295 (21.36%), Postives = 112/295 (37.97%), Query Frame = 1 

Query: 74  AKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVISKLFN 133
           A ++F  +K  G   N  T + ++          +   M  +M ++   P+    + +  
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464

Query: 134 AYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSSGFTV 193
             G  G   ++ +V  ++K        + ++  IS +G+            EM  +GF  
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNA 524

Query: 194 NSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLGEFL 253
              T N+ +   +  G     E     +K   F   +     M   Y +   +  +    
Sbjct: 525 CVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIE 584

Query: 254 RDVGLGRKNVGNLLWNLLLLSYAANFKMKSL---QREFLQMVDAGFNPDLTTFNIRALAF 313
             +  G+     +L   LLL   ANFK ++L   +R F      G+ PD+  FN     F
Sbjct: 585 NRIKEGQIFPSWMLLRTLLL---ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 644

Query: 314 SRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPDQ 366
           +R ++       LE ++   + PDLVTY  ++D YV R      E IL  +   Q
Sbjct: 645 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696

[Close]
BLAST of Cucsa.179000 vs. Swiss-Prot
Match: PP171_ARATH (Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidopsis thaliana GN=At2g26790 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 8.1e-09
Identity = 62/276 (22.46%), Postives = 117/276 (42.39%), Query Frame = 1 

Query: 74  AKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVISKLFN 133
           A E+  E+K  G   +    +T++  Y   G  + A  + +EM+ +   P +   + L +
Sbjct: 407 AFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVS 466

Query: 134 AYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAIS--CFG-KHKQLELMESTLREMVSSG 193
              + GH + + ++ +++K           S+ I   CF  K K+ E   S+L +     
Sbjct: 467 GLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPE- 526

Query: 194 FTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLG 253
              N A   SF+  Y   G     + AY    R  + + K   + + F+   +    +  
Sbjct: 527 ---NKA---SFVKGYCEAGL---SKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAH 586

Query: 254 EFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTFNIRALAF 313
           + L+ +   R   G  +   ++ ++     ++  Q  F  MV+ G  PDL T+ I    +
Sbjct: 587 DVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTY 646

Query: 314 SRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYV 347
            R++ L       E MK   I+PD+VTY  ++D Y+
Sbjct: 647 CRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYL 672

[Close]
BLAST of Cucsa.179000 vs. TrEMBL
Match: D7T0N2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0065g00380 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 1.3e-146
Identity = 261/413 (63.20%), Postives = 329/413 (79.66%), Query Frame = 1 

Query: 13  CFPRDFKRERSILS-HQRHAACRASSCKIFQQHNEGSSVDDSFN-INNSQVIKKLSRRRM 72
           C     K +R  +S HQ ++  RA + K+F    +  SVD   N ++ + +I+ LSR+R+
Sbjct: 11  CLIGSHKTQRFRVSLHQNYSPNRALARKLFWHWKQERSVDGKDNYVDYTPLIQALSRKRL 70

Query: 73  PILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVISK 132
           P +A+E+  E+KSEGF  NNSTLS +M+ Y D+G   +AQA+W+E++NS F P++Q++SK
Sbjct: 71  PHVAQELLFEMKSEGFLPNNSTLSALMLCYADNGLFPKAQALWDEIINSSFGPNIQIVSK 130

Query: 133 LFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSSG 192
           L +AYGKMGHF  +T++L QV  R  + + E YSLAISCFGK  QLE+ME+ L+EMVS G
Sbjct: 131 LIDAYGKMGHFGEVTRILHQVSSRDFNFMHEVYSLAISCFGKGGQLEMMENALKEMVSRG 190

Query: 193 FTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLG 252
           F V+SATGN+FI YYS+FGSL EME AY RLK+SR LIE++GI AM+FAYI+++K+YRLG
Sbjct: 191 FPVDSATGNAFIRYYSIFGSLTEMEAAYDRLKKSRILIEEEGIRAMSFAYIKEKKYYRLG 250

Query: 253 EFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTFNIRALAF 312
           +FLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFL+MV+AGF PDLTTFNIRALAF
Sbjct: 251 QFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLEMVEAGFAPDLTTFNIRALAF 310

Query: 313 SRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPDQPPVSL 372
           SRM L WDLHLSLEHM+H+ +  DLVTYGCVVDAY+DRRLG+NL+F L KMN D  P+  
Sbjct: 311 SRMSLFWDLHLSLEHMQHVKVVADLVTYGCVVDAYLDRRLGKNLDFALKKMNMDDSPLVS 370

Query: 373 TDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVFWNY 424
           TD FVFE LGKGDFH SSEAF++ ++  KWTYR+LI+ YLKK +R NQ+FWNY
Sbjct: 371 TDHFVFEVLGKGDFHSSSEAFLESKRNGKWTYRKLIATYLKKKYRSNQIFWNY 423

[Close]
BLAST of Cucsa.179000 vs. TrEMBL
Match: M5XQ40_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006191mg PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 1.2e-144
Identity = 258/420 (61.43%), Postives = 334/420 (79.52%), Query Frame = 1 

Query: 6   TMVANSYCFPRDFKRER-SILSHQRHAACRASSCKIFQQHNEGSSVDDS-FNINNSQVIK 65
           T++ ++ C     K +  S  SHQ  +  RA + KI ++  +    D     ++   +I+
Sbjct: 4   TLLLSTTCVSSSLKPQHLSFSSHQPQSQSRALARKIIRKWKQEECFDGKGIYVDCVPLIR 63

Query: 66  KLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEP 125
            LSR++MP +A+E+ LE+KS+G   +NSTLS +M+ + ++G   QA+A+W+EML+S F P
Sbjct: 64  SLSRQKMPHVAQELVLEMKSDGLLPSNSTLSALMLCHANNGLFPQAEAIWDEMLHSSFVP 123

Query: 126 SVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTL 185
           S+QV+S+LF+AYG +G F+ + ++L Q++ R   L PE YSLAISCFGK  QLELME TL
Sbjct: 124 SIQVVSELFDAYGNVGCFEKVNEILAQIRSRNLSLFPEVYSLAISCFGKGGQLELMEGTL 183

Query: 186 REMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRK 245
           +EM+S GF ++SATGN+FI YYS+FGSL EMETAYGRLKRSRFLIE++GI AM+FAY++K
Sbjct: 184 KEMISRGFPLDSATGNAFIRYYSIFGSLTEMETAYGRLKRSRFLIEEEGIRAMSFAYLKK 243

Query: 246 RKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTF 305
           RKFYRL E L++VGLGR+N+GNL WNLLLLSYAA+FKMKSLQREFL+MV+AGF+PDLTTF
Sbjct: 244 RKFYRLAELLKNVGLGRRNLGNLSWNLLLLSYAADFKMKSLQREFLRMVEAGFHPDLTTF 303

Query: 306 NIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNP 365
           NIRALAFSRM LLWDLHLSLEHMKH  + PDLVT GCVVDAY++RRLG+N+ F L+KMN 
Sbjct: 304 NIRALAFSRMSLLWDLHLSLEHMKHEKVFPDLVTCGCVVDAYLERRLGKNMYFALNKMNL 363

Query: 366 DQPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVFWNY 424
           D  P+ LTD FVFE LGKGDFH SSEAF++F+ Q++WTYR LIS+YLKK +RRNQ+FWNY
Sbjct: 364 DDSPLILTDPFVFEVLGKGDFHASSEAFLEFQSQREWTYRRLISVYLKKQYRRNQIFWNY 423

[Close]
BLAST of Cucsa.179000 vs. TrEMBL
Match: A0A067K0T9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14439 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 7.4e-142
Identity = 253/407 (62.16%), Postives = 324/407 (79.61%), Query Frame = 1 

Query: 19  KRER-SILSHQRHAACRASSCKIFQQHNEGSSV-DDSFNINNSQVIKKLSRRRMPILAKE 78
           KR R  +   QR    RA + KI  Q  +G SV      ++ + +++ L ++RM  LA E
Sbjct: 23  KRTRFRVFFSQRKPTNRALARKIIWQWKQGRSVYGKEIFVDCASLVQTLGKKRMTHLADE 82

Query: 79  IFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVISKLFNAYG 138
           + LE+KS+G+  +NSTLS +M+ Y ++G   QAQ++WEE+L++ FEPS+Q++S+L +AYG
Sbjct: 83  LLLEMKSQGYVPSNSTLSAMMICYAENGLLPQAQSIWEEILSTSFEPSIQIVSELISAYG 142

Query: 139 KMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSSGFTVNSA 198
           K G F+ + K+LDQ+       L EAYSLAISCFG   Q++LME+TL+EMVS GF+V+ A
Sbjct: 143 KSGQFNEVKKILDQLSYSNFSSLHEAYSLAISCFGNGGQIQLMENTLKEMVSRGFSVDFA 202

Query: 199 TGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLGEFLRDV 258
           TGN+FI YYS+ GSL EME+A  RLKRSR LI+++GI AMAFA+IR+RKFYRLGEFLRDV
Sbjct: 203 TGNTFIKYYSIHGSLTEMESACNRLKRSRHLIDREGIRAMAFAFIRERKFYRLGEFLRDV 262

Query: 259 GLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTFNIRALAFSRMDLL 318
           GLGR++VGNLLWN LLLSYAANFKMKSLQREFL+M +AGF PDLTTFNIRALAFSRM L 
Sbjct: 263 GLGRRDVGNLLWNFLLLSYAANFKMKSLQREFLRMSEAGFRPDLTTFNIRALAFSRMSLF 322

Query: 319 WDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPDQPPVSLTDSFVF 378
           WDLHLSLEHMK+  + PDLVTYGC VDAY+DRRLG+NL+F+L+KMN D+ PV  TD FVF
Sbjct: 323 WDLHLSLEHMKYEKVSPDLVTYGCFVDAYLDRRLGKNLDFVLNKMNLDESPVVSTDPFVF 382

Query: 379 EALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVFWNY 424
           E LGKGDFH S+EAF++F+++KKWTY+EL+SLYL+K +R NQ+FWNY
Sbjct: 383 EVLGKGDFHSSAEAFLEFKRKKKWTYKELVSLYLRKQYRSNQIFWNY 429

[Close]
BLAST of Cucsa.179000 vs. TrEMBL
Match: B9N840_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0018s14360g PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 3.7e-141
Identity = 263/424 (62.03%), Postives = 320/424 (75.47%), Query Frame = 1 

Query: 6   TMVANSYCFPR---DFKRER-SILSHQRHAACRASSCKIFQQHNEGSSVDDSFNINN-SQ 65
           T++A + C+      +K +R +I S +R    RA + K+ +Q      V       + + 
Sbjct: 5   TVIAATTCYANVIGSYKPKRFAIFSIKRDPKKRALAQKMIRQWKRDQGVFGKETCADCAS 64

Query: 66  VIKKLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSC 125
           +I+ L + R P LA+E+ LELK EGF  +N TLS +M+ Y D G   QAQA+WEEML S 
Sbjct: 65  LIQTLCKHRRPHLAEELLLELKCEGFLPDNRTLSAMMLCYADSGLLPQAQAIWEEMLYSS 124

Query: 126 FEPSVQVISKLFNAYGKMGHFDYITKVLDQVK-LRYSHLLPEAYSLAISCFGKHKQLELM 185
           F PSVQVIS L + Y K G FD + K+LDQ+  LR    LP+ YSLAISCFGK  QLELM
Sbjct: 125 FVPSVQVISDLIDIYAKSGLFDEVIKILDQLSSLRTFDFLPQVYSLAISCFGKGGQLELM 184

Query: 186 ESTLREMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFA 245
           E TL++MVS GF V+SATGN+F++YYS+ GSL EME AY RLKRSR LIE++GI AM+FA
Sbjct: 185 EDTLKKMVSKGFWVDSATGNAFVVYYSLHGSLAEMEAAYDRLKRSRLLIEREGIRAMSFA 244

Query: 246 YIRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPD 305
           YI++RKFY L EFLRDVGLGRKN+GNL+WNLLLLSY+ANFKMK+LQREFL M++AGF+PD
Sbjct: 245 YIKERKFYGLSEFLRDVGLGRKNLGNLIWNLLLLSYSANFKMKTLQREFLNMLEAGFHPD 304

Query: 306 LTTFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILS 365
           LTTFNIRALAFSRM LLWDLHL LEHMKH  + PDLVTYGC+VDAY+DRRL RNLEF LS
Sbjct: 305 LTTFNIRALAFSRMSLLWDLHLGLEHMKHDKVAPDLVTYGCIVDAYLDRRLVRNLEFALS 364

Query: 366 KMNPDQPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQV 424
           KM+ D  PV  TD FVFE  GKGDFH SSEAFM+F++Q+KWTYRELI +YL+K HR   +
Sbjct: 365 KMHVDNSPVLSTDPFVFEVFGKGDFHSSSEAFMEFKRQRKWTYRELIKIYLRKQHRSKHI 424

[Close]
BLAST of Cucsa.179000 vs. TrEMBL
Match: V4UUW3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010414mg PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 8.1e-141
Identity = 254/407 (62.41%), Postives = 322/407 (79.12%), Query Frame = 1 

Query: 18  FKRER-SILSHQRHAACRASSCKIFQQHNEGSSVDDSFNINNSQVIKKLSRRRMPILAKE 77
           FK +R ++ SHQ H      + KI +   +   VD +       +++ L R++ P LA +
Sbjct: 12  FKFKRFNVPSHQTHPKNGDLARKIIRYRKQEGFVDCA------SLVEDLGRKKKPHLAHQ 71

Query: 78  IFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVISKLFNAYG 137
           +   +KSEG   +NSTL  +M+ Y ++G  L+AQ +WEE+L+S F  SVQV+S L +AYG
Sbjct: 72  LVNTVKSEGLLPDNSTLCALMLCYANNGFVLEAQVVWEELLSSSFVLSVQVLSDLMDAYG 131

Query: 138 KMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSSGFTVNSA 197
           ++G F+ I  ++DQV  R + LLPE YS AISCFGK  QLELME+TL+EMVS GF+V+SA
Sbjct: 132 RIGCFNEIISIIDQVSCRNADLLPEVYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSA 191

Query: 198 TGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLGEFLRDV 257
           TGN+FIIYYS FGSL EMETAYGRLKRSR LI+K+GI A++F Y+++RKF+ LGEFLRDV
Sbjct: 192 TGNAFIIYYSRFGSLTEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFMLGEFLRDV 251

Query: 258 GLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTFNIRALAFSRMDLL 317
           GLGRK++GNLLWNLLLLSYA NFKMKSLQREF++M +AGF+PDLTTFNIRA+AFSRM + 
Sbjct: 252 GLGRKDLGNLLWNLLLLSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMF 311

Query: 318 WDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPDQPPVSLTDSFVF 377
           WDLHLSLEHMKH ++ PDLVTYGCVVDAY+D+RLGRNL+F LSKMN D  PV  TD +VF
Sbjct: 312 WDLHLSLEHMKHESVGPDLVTYGCVVDAYLDKRLGRNLDFGLSKMNLDDSPVVSTDPYVF 371

Query: 378 EALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVFWNY 424
           EA GKGDFH SSEAF++F++Q+KWTYR+LI++YLKK  RRNQ+FWNY
Sbjct: 372 EAFGKGDFHSSSEAFLEFKRQRKWTYRKLIAVYLKKQLRRNQIFWNY 412

[Close]
BLAST of Cucsa.179000 vs. TAIR10
Match: AT3G42630.1 (AT3G42630.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 442.6 bits (1137), Expect = 2.8e-124
Identity = 213/368 (57.88%), Postives = 281/368 (76.36%), Query Frame = 1 

Query: 56  INNSQVIKKLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEE 115
           ++ + +++ LS+RR+P +A EIFL+ KS     N  TL  +M+ + ++G  L+A+ +W+E
Sbjct: 48  VDYAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDE 107

Query: 116 MLNSCFEPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQ 175
           ++NSCF P V V+SKL +AY + G FD + K+   V  R+S LLP   SLAISCFGK+ Q
Sbjct: 108 IINSCFVPDVFVVSKLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFGKNGQ 167

Query: 176 LELMESTLREMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMA 235
           LELME  + EM S G  + + T N  + YYS FGSL +ME AYGR+K+   +IE++ I A
Sbjct: 168 LELMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEEEIRA 227

Query: 236 MAFAYIRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAG 295
           +  AY+++RKFYRL EFL DVGLGR+N+GN+LWN +LLSYAA+FKMKSLQREF+ M+DAG
Sbjct: 228 VVLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGMLDAG 287

Query: 296 FNPDLTTFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLE 355
           F+PDLTTFNIRALAFSRM L WDLHL+LEHM+ +NI PDLVT+GCVVDAY+D+RL RNLE
Sbjct: 288 FSPDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLARNLE 347

Query: 356 FILSKMNPDQPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHR 415
           F+ ++MN D  P+ LTD   FE LGKGDFH+SSEA ++F  +K WTYR+LI +YLKK  R
Sbjct: 348 FVYNRMNLDDSPLVLTDPLAFEVLGKGDFHLSSEAVLEFSPRKNWTYRKLIGVYLKKKLR 407

Query: 416 RNQVFWNY 424
           R+Q+FWNY
Sbjct: 408 RDQIFWNY 415

[Close]
BLAST of Cucsa.179000 vs. TAIR10
Match: AT2G18940.1 (AT2G18940.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 2.1e-10
Identity = 66/330 (20.00%), Postives = 125/330 (37.88%), Query Frame = 1 

Query: 61  VIKKLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSC 120
           V  K+ R    IL   +  E++S+G   +  T ST++     +G   +A+  + E+ +  
Sbjct: 254 VFGKMGRSWRKILG--VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCG 313

Query: 121 FEPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELME 180
           +EP     + L   +GK G +     VL +++          Y+  ++ + +    +   
Sbjct: 314 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAA 373

Query: 181 STLREMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAY 240
             +  M   G   N+ T  + I  Y   G   E    +  +K +  +       A+    
Sbjct: 374 GVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL 433

Query: 241 IRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDL 300
            +K +   + + L D+     +     WN +L         K + R F +M   GF PD 
Sbjct: 434 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDR 493

Query: 301 TTFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSK 360
            TFN    A+ R     D       M        + TY  +++A   +   R+ E ++S 
Sbjct: 494 DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 553

Query: 361 M-NPDQPPVSLTDSFVFEALGKGDFHMSSE 390
           M +    P   + S + +   KG  ++  E
Sbjct: 554 MKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581


HSP 2 Score: 59.7 bits (143), Expect = 5.1e-09
Identity = 63/295 (21.36%), Postives = 112/295 (37.97%), Query Frame = 1 

Query: 74  AKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVISKLFN 133
           A ++F  +K  G   N  T + ++          +   M  +M ++   P+    + +  
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464

Query: 134 AYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSSGFTV 193
             G  G   ++ +V  ++K        + ++  IS +G+            EM  +GF  
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNA 524

Query: 194 NSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLGEFL 253
              T N+ +   +  G     E     +K   F   +     M   Y +   +  +    
Sbjct: 525 CVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIE 584

Query: 254 RDVGLGRKNVGNLLWNLLLLSYAANFKMKSL---QREFLQMVDAGFNPDLTTFNIRALAF 313
             +  G+     +L   LLL   ANFK ++L   +R F      G+ PD+  FN     F
Sbjct: 585 NRIKEGQIFPSWMLLRTLLL---ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 644

Query: 314 SRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPDQ 366
           +R ++       LE ++   + PDLVTY  ++D YV R      E IL  +   Q
Sbjct: 645 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696

[Close]
BLAST of Cucsa.179000 vs. TAIR10
Match: AT2G26790.1 (AT2G26790.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 4.6e-10
Identity = 62/276 (22.46%), Postives = 117/276 (42.39%), Query Frame = 1 

Query: 74  AKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVISKLFN 133
           A E+  E+K  G   +    +T++  Y   G  + A  + +EM+ +   P +   + L +
Sbjct: 407 AFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVS 466

Query: 134 AYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAIS--CFG-KHKQLELMESTLREMVSSG 193
              + GH + + ++ +++K           S+ I   CF  K K+ E   S+L +     
Sbjct: 467 GLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPE- 526

Query: 194 FTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLG 253
              N A   SF+  Y   G     + AY    R  + + K   + + F+   +    +  
Sbjct: 527 ---NKA---SFVKGYCEAGL---SKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAH 586

Query: 254 EFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTFNIRALAF 313
           + L+ +   R   G  +   ++ ++     ++  Q  F  MV+ G  PDL T+ I    +
Sbjct: 587 DVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTY 646

Query: 314 SRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYV 347
            R++ L       E MK   I+PD+VTY  ++D Y+
Sbjct: 647 CRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYL 672

[Close]
BLAST of Cucsa.179000 vs. NCBI nr
Match: gi|778667690|ref|XP_011648974.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like [Cucumis sativus])

HSP 1 Score: 853.2 bits (2203), Expect = 1.9e-244
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 1 

Query: 1   MGFLVTMVANSYCFPRDFKRERSILSHQRHAACRASSCKIFQQHNEGSSVDDSFNINNSQ 60
           MGFLVTMVANSYCFPRDFKRERSILSHQRHAACRASSCKIFQQHNEGSSVDDSFNINNSQ
Sbjct: 1   MGFLVTMVANSYCFPRDFKRERSILSHQRHAACRASSCKIFQQHNEGSSVDDSFNINNSQ 60

Query: 61  VIKKLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSC 120
           VIKKLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSC
Sbjct: 61  VIKKLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSC 120

Query: 121 FEPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELME 180
           FEPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELME
Sbjct: 121 FEPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELME 180

Query: 181 STLREMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAY 240
           STLREMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAY
Sbjct: 181 STLREMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAY 240

Query: 241 IRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDL 300
           IRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDL
Sbjct: 241 IRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDL 300

Query: 301 TTFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSK 360
           TTFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSK
Sbjct: 301 TTFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSK 360

Query: 361 MNPDQPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVF 420
           MNPDQPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVF
Sbjct: 361 MNPDQPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVF 420

Query: 421 WNY 424
           WNY
Sbjct: 421 WNY 423

[Close]
BLAST of Cucsa.179000 vs. NCBI nr
Match: gi|659069563|ref|XP_008450656.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like [Cucumis melo])

HSP 1 Score: 822.0 bits (2122), Expect = 4.8e-235
Identity = 408/423 (96.45%), Postives = 413/423 (97.64%), Query Frame = 1 

Query: 1   MGFLVTMVANSYCFPRDFKRERSILSHQRHAACRASSCKIFQQHNEGSSVDDSFNINNSQ 60
           M FLVT VAN YCFPR+FK+ER +LSHQRH ACRASSCKIFQQHNEGSSVD  FNINNSQ
Sbjct: 3   MDFLVTTVANPYCFPRNFKQERPMLSHQRHTACRASSCKIFQQHNEGSSVDYGFNINNSQ 62

Query: 61  VIKKLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSC 120
           VIKKLSRRRMP LAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSC
Sbjct: 63  VIKKLSRRRMPTLAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSC 122

Query: 121 FEPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELME 180
           FEPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELME
Sbjct: 123 FEPSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELME 182

Query: 181 STLREMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAY 240
           STLREMVSSGFTVNSATGNSFIIYYSMFGSL+EMETAYGRLKRSRFLIEKKGIMAMAFAY
Sbjct: 183 STLREMVSSGFTVNSATGNSFIIYYSMFGSLLEMETAYGRLKRSRFLIEKKGIMAMAFAY 242

Query: 241 IRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDL 300
           IRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMV+AGFNPDL
Sbjct: 243 IRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDL 302

Query: 301 TTFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSK 360
           TTFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSK
Sbjct: 303 TTFNIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSK 362

Query: 361 MNPDQPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVF 420
           MNP QPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKK HRRNQVF
Sbjct: 363 MNPVQPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKQHRRNQVF 422

Query: 421 WNY 424
           WNY
Sbjct: 423 WNY 425

[Close]
BLAST of Cucsa.179000 vs. NCBI nr
Match: gi|225445658|ref|XP_002265876.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g42630 [Vitis vinifera])

HSP 1 Score: 527.7 bits (1358), Expect = 1.9e-146
Identity = 261/413 (63.20%), Postives = 329/413 (79.66%), Query Frame = 1 

Query: 13  CFPRDFKRERSILS-HQRHAACRASSCKIFQQHNEGSSVDDSFN-INNSQVIKKLSRRRM 72
           C     K +R  +S HQ ++  RA + K+F    +  SVD   N ++ + +I+ LSR+R+
Sbjct: 11  CLIGSHKTQRFRVSLHQNYSPNRALARKLFWHWKQERSVDGKDNYVDYTPLIQALSRKRL 70

Query: 73  PILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVISK 132
           P +A+E+  E+KSEGF  NNSTLS +M+ Y D+G   +AQA+W+E++NS F P++Q++SK
Sbjct: 71  PHVAQELLFEMKSEGFLPNNSTLSALMLCYADNGLFPKAQALWDEIINSSFGPNIQIVSK 130

Query: 133 LFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSSG 192
           L +AYGKMGHF  +T++L QV  R  + + E YSLAISCFGK  QLE+ME+ L+EMVS G
Sbjct: 131 LIDAYGKMGHFGEVTRILHQVSSRDFNFMHEVYSLAISCFGKGGQLEMMENALKEMVSRG 190

Query: 193 FTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLG 252
           F V+SATGN+FI YYS+FGSL EME AY RLK+SR LIE++GI AM+FAYI+++K+YRLG
Sbjct: 191 FPVDSATGNAFIRYYSIFGSLTEMEAAYDRLKKSRILIEEEGIRAMSFAYIKEKKYYRLG 250

Query: 253 EFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTFNIRALAF 312
           +FLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFL+MV+AGF PDLTTFNIRALAF
Sbjct: 251 QFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLEMVEAGFAPDLTTFNIRALAF 310

Query: 313 SRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPDQPPVSL 372
           SRM L WDLHLSLEHM+H+ +  DLVTYGCVVDAY+DRRLG+NL+F L KMN D  P+  
Sbjct: 311 SRMSLFWDLHLSLEHMQHVKVVADLVTYGCVVDAYLDRRLGKNLDFALKKMNMDDSPLVS 370

Query: 373 TDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVFWNY 424
           TD FVFE LGKGDFH SSEAF++ ++  KWTYR+LI+ YLKK +R NQ+FWNY
Sbjct: 371 TDHFVFEVLGKGDFHSSSEAFLESKRNGKWTYRKLIATYLKKKYRSNQIFWNY 423

[Close]
BLAST of Cucsa.179000 vs. NCBI nr
Match: gi|596141418|ref|XP_007222454.1| (hypothetical protein PRUPE_ppa006191mg [Prunus persica])

HSP 1 Score: 521.2 bits (1341), Expect = 1.7e-144
Identity = 258/420 (61.43%), Postives = 334/420 (79.52%), Query Frame = 1 

Query: 6   TMVANSYCFPRDFKRER-SILSHQRHAACRASSCKIFQQHNEGSSVDDS-FNINNSQVIK 65
           T++ ++ C     K +  S  SHQ  +  RA + KI ++  +    D     ++   +I+
Sbjct: 4   TLLLSTTCVSSSLKPQHLSFSSHQPQSQSRALARKIIRKWKQEECFDGKGIYVDCVPLIR 63

Query: 66  KLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEP 125
            LSR++MP +A+E+ LE+KS+G   +NSTLS +M+ + ++G   QA+A+W+EML+S F P
Sbjct: 64  SLSRQKMPHVAQELVLEMKSDGLLPSNSTLSALMLCHANNGLFPQAEAIWDEMLHSSFVP 123

Query: 126 SVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTL 185
           S+QV+S+LF+AYG +G F+ + ++L Q++ R   L PE YSLAISCFGK  QLELME TL
Sbjct: 124 SIQVVSELFDAYGNVGCFEKVNEILAQIRSRNLSLFPEVYSLAISCFGKGGQLELMEGTL 183

Query: 186 REMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRK 245
           +EM+S GF ++SATGN+FI YYS+FGSL EMETAYGRLKRSRFLIE++GI AM+FAY++K
Sbjct: 184 KEMISRGFPLDSATGNAFIRYYSIFGSLTEMETAYGRLKRSRFLIEEEGIRAMSFAYLKK 243

Query: 246 RKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTF 305
           RKFYRL E L++VGLGR+N+GNL WNLLLLSYAA+FKMKSLQREFL+MV+AGF+PDLTTF
Sbjct: 244 RKFYRLAELLKNVGLGRRNLGNLSWNLLLLSYAADFKMKSLQREFLRMVEAGFHPDLTTF 303

Query: 306 NIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNP 365
           NIRALAFSRM LLWDLHLSLEHMKH  + PDLVT GCVVDAY++RRLG+N+ F L+KMN 
Sbjct: 304 NIRALAFSRMSLLWDLHLSLEHMKHEKVFPDLVTCGCVVDAYLERRLGKNMYFALNKMNL 363

Query: 366 DQPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVFWNY 424
           D  P+ LTD FVFE LGKGDFH SSEAF++F+ Q++WTYR LIS+YLKK +RRNQ+FWNY
Sbjct: 364 DDSPLILTDPFVFEVLGKGDFHASSEAFLEFQSQREWTYRRLISVYLKKQYRRNQIFWNY 423

[Close]
BLAST of Cucsa.179000 vs. NCBI nr
Match: gi|645234725|ref|XP_008223943.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g42630 [Prunus mume])

HSP 1 Score: 520.8 bits (1340), Expect = 2.3e-144
Identity = 257/420 (61.19%), Postives = 334/420 (79.52%), Query Frame = 1 

Query: 6   TMVANSYCFPRDFKRER-SILSHQRHAACRASSCKIFQQHNEGSSVDDS-FNINNSQVIK 65
           T++ ++ C     K +  S  SHQ  +  RA + KI ++  +    D     ++   +I+
Sbjct: 4   TLLLSTTCVSSSLKPQHLSFSSHQPQSQSRALARKIIRKWKQEECFDGKDIYVDCVPLIR 63

Query: 66  KLSRRRMPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEP 125
            LSR++MP +A+E+ LE+KS+G   +NSTLS +M+ + ++G   QA+A+W+EML+S F P
Sbjct: 64  SLSRQKMPHVAQELLLEMKSDGLLPSNSTLSALMLCHANNGLFPQAEAIWDEMLHSSFVP 123

Query: 126 SVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTL 185
           S+QV+S+LF+AYG +G F+ + ++L Q++ R   L PE YSLAISCFGK  QLELME TL
Sbjct: 124 SIQVVSELFDAYGNVGCFEKVNEILAQIRSRNLSLFPEVYSLAISCFGKGGQLELMEGTL 183

Query: 186 REMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRK 245
           +EM+S GF ++SATGN+FI YYS+FGSL EMETAYGRLKRSRFLIE++GI AM+FAY++K
Sbjct: 184 KEMISRGFPLDSATGNAFIRYYSIFGSLTEMETAYGRLKRSRFLIEEEGIRAMSFAYLKK 243

Query: 246 RKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTF 305
           RKFYRL E L++VGLGR+N+GNL WNLLLLSYAA+FKMKSLQREFL+MV+AGF+PDLTTF
Sbjct: 244 RKFYRLAELLKNVGLGRRNLGNLSWNLLLLSYAADFKMKSLQREFLRMVEAGFHPDLTTF 303

Query: 306 NIRALAFSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNP 365
           NIRALAFSRM LLWDLHLSLEHMKH  + PDLVT GCVVDAY++RRLG+N+ F L+KMN 
Sbjct: 304 NIRALAFSRMSLLWDLHLSLEHMKHEKVVPDLVTCGCVVDAYLERRLGKNMYFALNKMNL 363

Query: 366 DQPPVSLTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVFWNY 424
           D  P+ LTD FVFE LGKGDFH SSEAF++F+ Q++WTYR LIS+YLKK +R+NQ+FWNY
Sbjct: 364 DDSPLILTDPFVFEVLGKGDFHASSEAFLEFQSQREWTYRRLISVYLKKQYRKNQIFWNY 423

The following BLAST results are available for this feature:
BLAST of Cucsa.179000 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP263_ARATH4.9e-12357.88Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana GN... [more]
PP163_ARATH3.6e-0920.00Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... [more]
PP171_ARATH8.1e-0922.46Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidop... [more]
BLAST of Cucsa.179000 vs. TrEMBL
Match NameE-valueIdentityDescription
D7T0N2_VITVI1.3e-14663.20Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0065g00380 PE=4 SV=... [more]
M5XQ40_PRUPE1.2e-14461.43Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006191mg PE=4 SV=1[more]
A0A067K0T9_JATCU7.4e-14262.16Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14439 PE=4 SV=1[more]
B9N840_POPTR3.7e-14162.03Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
V4UUW3_9ROSI8.1e-14162.41Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010414mg PE=4 SV=1[more]
BLAST of Cucsa.179000 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G42630.12.8e-12457.88 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G18940.12.1e-1020.00 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G26790.14.6e-1022.46 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Cucsa.179000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778667690|ref|XP_011648974.1|1.9e-244100.00PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like [Cucumis s... [more]
gi|659069563|ref|XP_008450656.1|4.8e-23596.45PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like [Cucumis m... [more]
gi|225445658|ref|XP_002265876.1|1.9e-14663.20PREDICTED: pentatricopeptide repeat-containing protein At3g42630 [Vitis vinifera... [more]
gi|596141418|ref|XP_007222454.1|1.7e-14461.43hypothetical protein PRUPE_ppa006191mg [Prunus persica][more]
gi|645234725|ref|XP_008223943.1|2.3e-14461.19PREDICTED: pentatricopeptide repeat-containing protein At3g42630 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.179000.1Cucsa.179000.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 162..191
score: 0.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 162..194
score: 5.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 160..423
score: 8.2E-177coord: 56..144
score: 8.2E
NoneNo IPR availablePANTHERPTHR24015:SF649SUBFAMILY NOT NAMEDcoord: 160..423
score: 8.2E-177coord: 56..144
score: 8.2E