Cp4.1LG04g01980 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACACACCGGACCGGGTGTACTATCAATGGCGAATTCTGAACCGAACACCAATGGTTCTCAGTTCTTCATTTGTACTGAGAAGACTTCATGGCTGGATGGGAAGCATGTTGTGTTTGGAAAAGTTGTAGGTGGTTACAATGTAGTCAAGGAGATGGAGAAGGTGGGATCTGATAGTGGGAGGACTTCTGAAACTGTTGTGATAGAGGACTGCGGGCAGATAGATAAGCATCTGAGAGTTGAAGTTAGAAACGTTTGA ATGAAACACACCGGACCGGGTGTACTATCAATGGCGAATTCTGAACCGAACACCAATGGTTCTCAGTTCTTCATTTGTACTGAGAAGACTTCATGGCTGGATGGGAAGCATGTTGTGTTTGGAAAAGTTGTAGGTGGTTACAATGTAGTCAAGGAGATGGAGAAGGTGGGATCTGATAGTGGGAGGACTTCTGAAACTGTTGTGATAGAGGACTGCGGGCAGATAGATAAGCATCTGAGAGTTGAAGTTAGAAACGTTTGA ATGAAACACACCGGACCGGGTGTACTATCAATGGCGAATTCTGAACCGAACACCAATGGTTCTCAGTTCTTCATTTGTACTGAGAAGACTTCATGGCTGGATGGGAAGCATGTTGTGTTTGGAAAAGTTGTAGGTGGTTACAATGTAGTCAAGGAGATGGAGAAGGTGGGATCTGATAGTGGGAGGACTTCTGAAACTGTTGTGATAGAGGACTGCGGGCAGATAGATAAGCATCTGAGAGTTGAAGTTAGAAACGTTTGA MKHTGPGVLSMANSEPNTNGSQFFICTEKTSWLDGKHVVFGKVVGGYNVVKEMEKVGSDSGRTSETVVIEDCGQIDKHLRVEVRNV
BLAST of Cp4.1LG04g01980 vs. Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=2 SV=2) HSP 1 Score: 136.0 bits (341), Expect = 2.0e-31 Identity = 63/75 (84.00%), Postives = 67/75 (89.33%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 6.4e-30 Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 2.1e-28 Identity = 58/74 (78.38%), Postives = 66/74 (89.19%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 2.1e-28 Identity = 57/74 (77.03%), Postives = 66/74 (89.19%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. Swiss-Prot
Match: CYP1_SOYBN (Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max GN=Cyp1 PE=2 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 4.6e-28 Identity = 57/73 (78.08%), Postives = 65/73 (89.04%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. TrEMBL
Match: B5LWR0_ZIZJJ (Peptidyl-prolyl cis-trans isomerase OS=Ziziphus jujuba GN=CyP PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 6.3e-32 Identity = 67/75 (89.33%), Postives = 71/75 (94.67%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. TrEMBL
Match: B9S7J2_RICCO (Peptidyl-prolyl cis-trans isomerase OS=Ricinus communis GN=RCOM_0608620 PE=3 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 3.1e-31 Identity = 66/78 (84.62%), Postives = 73/78 (93.59%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. TrEMBL
Match: A0A103YE52_CYNCS (Peptidyl-prolyl cis-trans isomerase OS=Cynara cardunculus var. scolymus GN=Ccrd_014247 PE=3 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 6.9e-31 Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. TrEMBL
Match: V4VS87_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10022535mg PE=3 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 6.9e-31 Identity = 63/75 (84.00%), Postives = 72/75 (96.00%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. TrEMBL
Match: A0A166JH20_PANGI (Cyclophilin OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 6.9e-31 Identity = 65/77 (84.42%), Postives = 72/77 (93.51%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. TAIR10
Match: AT3G56070.1 (AT3G56070.1 rotamase cyclophilin 2) HSP 1 Score: 136.0 bits (341), Expect = 1.1e-32 Identity = 63/75 (84.00%), Postives = 67/75 (89.33%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. TAIR10
Match: AT2G16600.1 (AT2G16600.1 rotamase CYP 3) HSP 1 Score: 131.0 bits (328), Expect = 3.6e-31 Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. TAIR10
Match: AT4G34870.1 (AT4G34870.1 rotamase cyclophilin 5) HSP 1 Score: 125.9 bits (315), Expect = 1.2e-29 Identity = 58/74 (78.38%), Postives = 66/74 (89.19%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. TAIR10
Match: AT4G38740.1 (AT4G38740.1 rotamase CYP 1) HSP 1 Score: 116.7 bits (291), Expect = 7.1e-27 Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. TAIR10
Match: AT2G21130.1 (AT2G21130.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 116.3 bits (290), Expect = 9.2e-27 Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. NCBI nr
Match: gi|1009117537|ref|XP_015875370.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Ziziphus jujuba]) HSP 1 Score: 144.4 bits (363), Expect = 9.0e-32 Identity = 67/75 (89.33%), Postives = 71/75 (94.67%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. NCBI nr
Match: gi|1000959172|ref|XP_015576540.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Ricinus communis]) HSP 1 Score: 142.1 bits (357), Expect = 4.5e-31 Identity = 66/78 (84.62%), Postives = 73/78 (93.59%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. NCBI nr
Match: gi|976923089|gb|KVI07437.1| (Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain-containing protein [Cynara cardunculus var. scolymus]) HSP 1 Score: 141.0 bits (354), Expect = 9.9e-31 Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. NCBI nr
Match: gi|567900452|ref|XP_006442714.1| (hypothetical protein CICLE_v10022535mg [Citrus clementina]) HSP 1 Score: 141.0 bits (354), Expect = 9.9e-31 Identity = 63/75 (84.00%), Postives = 72/75 (96.00%), Query Frame = 1
BLAST of Cp4.1LG04g01980 vs. NCBI nr
Match: gi|568868998|ref|XP_006487732.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Citrus sinensis]) HSP 1 Score: 141.0 bits (354), Expect = 9.9e-31 Identity = 63/75 (84.00%), Postives = 72/75 (96.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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