MELO3C024662 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024662
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Peptidyl-prolyl cis-trans isomerase
Location	chr2 : 19866142 .. 19866348 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATGATGAACCAAACACCAATGGTTCTCAGTTCTTCATTTGCTTCACAAAGACTGTTTGGCTTGATGGGAGGCACGTTGTGTTTGGGAAAGTTGTGGATGGTATTAAGGTGTTGGTGGAGATGGAGTTTGAGGGTACAGAACCTGGGAGTACCAACAATCCAGTTGTGATTGAAGATTGTGGGCAGATAACTGAGGGCTGA

mRNA sequence

ATGGCGAATGATGAACCAAACACCAATGGTTCTCAGTTCTTCATTTGCTTCACAAAGACTGTTTGGCTTGATGGGAGGCACGTTGTGTTTGGGAAAGTTGTGGATGGTATTAAGGTGTTGGTGGAGATGGAGTTTGAGGGTACAGAACCTGGGAGTACCAACAATCCAGTTGTGATTGAAGATTGTGGGCAGATAACTGAGGGCTGA

Coding sequence (CDS)

ATGGCGAATGATGAACCAAACACCAATGGTTCTCAGTTCTTCATTTGCTTCACAAAGACTGTTTGGCTTGATGGGAGGCACGTTGTGTTTGGGAAAGTTGTGGATGGTATTAAGGTGTTGGTGGAGATGGAGTTTGAGGGTACAGAACCTGGGAGTACCAACAATCCAGTTGTGATTGAAGATTGTGGGCAGATAACTGAGGGCTGA

Protein sequence

MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIEDCGQITEG*

Homology

[Close]

BLAST of MELO3C024662 vs. Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=2 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 5.9e-18
Identity = 42/65 (64.62%), Postives = 48/65 (73.85%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC  KT WLDG+HVVFGKVVDG  V+  ME  G++ G+ +  VVIE
Sbjct: 107 MANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIE 166

Query: 61  DCGQI 66
           DCG++
Sbjct: 167 DCGEL 171

[Close]

BLAST of MELO3C024662 vs. Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.3e-17
Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN   NTNGSQFFIC  KT WLDG+HVVFG+VV+G+ V+ ++E  G++ G T+ PVVI 
Sbjct: 108 MANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIA 167

Query: 61  DCGQIT 67
           DCGQI+
Sbjct: 168 DCGQIS 173

[Close]

BLAST of MELO3C024662 vs. Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.0e-17
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC  KT WLDG+HVVFG+VV+G+ V+  +E  G+  G T   VV+E
Sbjct: 107 MANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVE 166

Query: 61  DCGQIT 67
           DCGQ++
Sbjct: 167 DCGQLS 172

[Close]

BLAST of MELO3C024662 vs. Swiss-Prot
Match: PPIE_SCHMA (Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 6.5e-17
Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC TK  WLDG+HVVFG+VVDG  V+ +ME  G++ G    PV+I 
Sbjct: 208 MANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVIIS 267

Query: 61  DCGQI 66
            CG++
Sbjct: 268 RCGEL 272

[Close]

BLAST of MELO3C024662 vs. Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.5e-16
Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  P TNGSQFFIC  KT WLDG+HVVFG+VV+G+ V+  +E  G++ G T  PV I 
Sbjct: 85  MANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVVEGMDVVRAIEKVGSQSGQTKKPVKIA 144

Query: 61  DCGQIT 67
           DCGQ++
Sbjct: 145 DCGQLS 150

[Close]

BLAST of MELO3C024662 vs. TrEMBL
Match: B5LWR0_ZIZJJ (Peptidyl-prolyl cis-trans isomerase OS=Ziziphus jujuba GN=CyP PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.7e-19
Identity = 48/66 (72.73%), Postives = 53/66 (80.30%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC  KT WLDG+HVVFGKVVDG  V+ EME  G++ G T+ PVVIE
Sbjct: 107 MANAGPNTNGSQFFICTEKTPWLDGKHVVFGKVVDGYNVVKEMEKVGSDSGRTSQPVVIE 166

Query: 61  DCGQIT 67
           DCGQIT
Sbjct: 167 DCGQIT 172

[Close]

BLAST of MELO3C024662 vs. TrEMBL
Match: A5B709_VITVI (Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera GN=VIT_14s0081g00700 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.7e-19
Identity = 49/67 (73.13%), Postives = 53/67 (79.10%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC TKT WLDG+HVVFGKVVDG  V+ EME  GT+ G+T   VVIE
Sbjct: 107 MANAGPNTNGSQFFICTTKTPWLDGKHVVFGKVVDGYSVVKEMEKVGTDSGTTLEKVVIE 166

Query: 61  DCGQITE 68
           DCGQI E
Sbjct: 167 DCGQIVE 173

[Close]

BLAST of MELO3C024662 vs. TrEMBL
Match: B9S7J2_RICCO (Peptidyl-prolyl cis-trans isomerase OS=Ricinus communis GN=RCOM_0608620 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.9e-19
Identity = 49/67 (73.13%), Postives = 53/67 (79.10%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC  KT WLDG+HVVFGKVVDG  V+ EME  G+E G T+  VVIE
Sbjct: 107 MANAGPNTNGSQFFICTEKTPWLDGKHVVFGKVVDGYSVVKEMEKVGSESGRTSQGVVIE 166

Query: 61  DCGQITE 68
           DCGQITE
Sbjct: 167 DCGQITE 173

[Close]

BLAST of MELO3C024662 vs. TrEMBL
Match: A0A103YE52_CYNCS (Peptidyl-prolyl cis-trans isomerase OS=Cynara cardunculus var. scolymus GN=Ccrd_014247 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.9e-19
Identity = 48/67 (71.64%), Postives = 55/67 (82.09%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC  KT WLDG+HVVFGKVVDG KV+ EME  G++ GST++ VVIE
Sbjct: 107 MANAGPNTNGSQFFICTDKTSWLDGKHVVFGKVVDGYKVVKEMEKVGSDSGSTSSTVVIE 166

Query: 61  DCGQITE 68
           DCG+I E
Sbjct: 167 DCGEIKE 173

[Close]

BLAST of MELO3C024662 vs. TrEMBL
Match: W9RQR8_9ROSA (Peptidyl-prolyl cis-trans isomerase OS=Morus notabilis GN=L484_024532 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.4e-19
Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC  KT WLDG+HVVFGKVVDG  V+ +ME  G + G T+ PVVIE
Sbjct: 108 MANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYSVVKQMESVGLDTGKTSQPVVIE 167

Query: 61  DCGQITE 68
           +CGQ+TE
Sbjct: 168 ECGQLTE 174

[Close]

BLAST of MELO3C024662 vs. TAIR10
Match: AT3G56070.1 (AT3G56070.1 rotamase cyclophilin 2)

HSP 1 Score: 90.9 bits (224), Expect = 3.3e-19
Identity = 42/65 (64.62%), Postives = 48/65 (73.85%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC  KT WLDG+HVVFGKVVDG  V+  ME  G++ G+ +  VVIE
Sbjct: 107 MANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIE 166

Query: 61  DCGQI 66
           DCG++
Sbjct: 167 DCGEL 171

[Close]

BLAST of MELO3C024662 vs. TAIR10
Match: AT2G16600.1 (AT2G16600.1 rotamase CYP 3)

HSP 1 Score: 89.7 bits (221), Expect = 7.4e-19
Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN   NTNGSQFFIC  KT WLDG+HVVFG+VV+G+ V+ ++E  G++ G T+ PVVI 
Sbjct: 108 MANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIA 167

Query: 61  DCGQIT 67
           DCGQI+
Sbjct: 168 DCGQIS 173

[Close]

BLAST of MELO3C024662 vs. TAIR10
Match: AT4G34870.1 (AT4G34870.1 rotamase cyclophilin 5)

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-17
Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC  KT WLDG+HVVFG+VV G+ V+  +E  G++ G T+  V I 
Sbjct: 107 MANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTIT 166

Query: 61  DCGQIT 67
           DCGQ++
Sbjct: 167 DCGQLS 172

[Close]

BLAST of MELO3C024662 vs. TAIR10
Match: AT4G38740.1 (AT4G38740.1 rotamase CYP 1)

HSP 1 Score: 84.3 bits (207), Expect = 3.1e-17
Identity = 38/66 (57.58%), Postives = 46/66 (69.70%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN   NTNGSQFFIC  KT WLDG+HVVFG+VV+G+ V+  +E  G+  G    PVV+ 
Sbjct: 107 MANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVA 166

Query: 61  DCGQIT 67
           DCGQ++
Sbjct: 167 DCGQLS 172

[Close]

BLAST of MELO3C024662 vs. TAIR10
Match: AT2G21130.1 (AT2G21130.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 84.0 bits (206), Expect = 4.1e-17
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN   NTNGSQFFIC  KT WLDG+HVVFG+VV+G+ V+  +E  G+  G    PVVI 
Sbjct: 108 MANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIA 167

Query: 61  DCGQIT 67
           DCG+I+
Sbjct: 168 DCGEIS 173

[Close]

BLAST of MELO3C024662 vs. NCBI nr
Match: gi|743853200|ref|XP_010940596.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Elaeis guineensis])

HSP 1 Score: 102.8 bits (255), Expect = 2.4e-19
Identity = 48/67 (71.64%), Postives = 54/67 (80.60%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC  KT WLDG+HVVFGKV+DG  V+  ME  G+E G T++PVVIE
Sbjct: 107 MANAGPNTNGSQFFICTEKTAWLDGKHVVFGKVIDGYSVVQAMEKVGSEGGRTSSPVVIE 166

Query: 61  DCGQITE 68
           DCGQITE
Sbjct: 167 DCGQITE 173

[Close]

BLAST of MELO3C024662 vs. NCBI nr
Match: gi|731416963|ref|XP_010660113.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Vitis vinifera])

HSP 1 Score: 101.7 bits (252), Expect = 5.4e-19
Identity = 49/67 (73.13%), Postives = 53/67 (79.10%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC TKT WLDG+HVVFGKVVDG  V+ EME  GT+ G+T   VVIE
Sbjct: 107 MANAGPNTNGSQFFICTTKTPWLDGKHVVFGKVVDGYSVVKEMEKVGTDSGTTLEKVVIE 166

Query: 61  DCGQITE 68
           DCGQI E
Sbjct: 167 DCGQIVE 173

[Close]

BLAST of MELO3C024662 vs. NCBI nr
Match: gi|1009117537|ref|XP_015875370.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Ziziphus jujuba])

HSP 1 Score: 101.7 bits (252), Expect = 5.4e-19
Identity = 48/66 (72.73%), Postives = 53/66 (80.30%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC  KT WLDG+HVVFGKVVDG  V+ EME  G++ G T+ PVVIE
Sbjct: 107 MANAGPNTNGSQFFICTEKTPWLDGKHVVFGKVVDGYNVVKEMEKVGSDSGRTSQPVVIE 166

Query: 61  DCGQIT 67
           DCGQIT
Sbjct: 167 DCGQIT 172

[Close]

BLAST of MELO3C024662 vs. NCBI nr
Match: gi|502113766|ref|XP_004494752.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Cicer arietinum])

HSP 1 Score: 101.7 bits (252), Expect = 5.4e-19
Identity = 48/65 (73.85%), Postives = 52/65 (80.00%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC TKT WLDG+HVVFGKVVDG  V+ EME  G+  G T+ PVVIE
Sbjct: 107 MANAGPNTNGSQFFICTTKTPWLDGKHVVFGKVVDGYSVVQEMEKVGSHSGKTSEPVVIE 166

Query: 61  DCGQI 66
           DCGQI
Sbjct: 167 DCGQI 171

[Close]

BLAST of MELO3C024662 vs. NCBI nr
Match: gi|976923089|gb|KVI07437.1| (Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 101.3 bits (251), Expect = 7.0e-19
Identity = 48/67 (71.64%), Postives = 55/67 (82.09%), Query Frame = 1


Query: 1   MANDEPNTNGSQFFICFTKTVWLDGRHVVFGKVVDGIKVLVEMEFEGTEPGSTNNPVVIE 60
           MAN  PNTNGSQFFIC  KT WLDG+HVVFGKVVDG KV+ EME  G++ GST++ VVIE
Sbjct: 107 MANAGPNTNGSQFFICTDKTSWLDGKHVVFGKVVDGYKVVKEMEKVGSDSGSTSSTVVIE 166

Query: 61  DCGQITE 68
           DCG+I E
Sbjct: 167 DCGEIKE 173

The following BLAST results are available for this feature:

BLAST of MELO3C024662 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CP19C_ARATH	5.9e-18	64.62	Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 P...	[more]
CP19A_ARATH	1.3e-17	62.12	Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 P...	[more]
CYPH_CATRO	5.0e-17	60.61	Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=1 SV=1	[more]
PPIE_SCHMA	6.5e-17	60.00	Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2	[more]
CYPH_ALLCE	1.5e-16	59.09	Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1	[more]

BLAST of MELO3C024662 vs. TrEMBL


Match Name	E-value	Identity	Description
B5LWR0_ZIZJJ	3.7e-19	72.73	Peptidyl-prolyl cis-trans isomerase OS=Ziziphus jujuba GN=CyP PE=2 SV=1	[more]
A5B709_VITVI	3.7e-19	73.13	Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera GN=VIT_14s0081g00700 PE=3 ...	[more]
B9S7J2_RICCO	4.9e-19	73.13	Peptidyl-prolyl cis-trans isomerase OS=Ricinus communis GN=RCOM_0608620 PE=3 SV=...	[more]
A0A103YE52_CYNCS	4.9e-19	71.64	Peptidyl-prolyl cis-trans isomerase OS=Cynara cardunculus var. scolymus GN=Ccrd_...	[more]
W9RQR8_9ROSA	6.4e-19	68.66	Peptidyl-prolyl cis-trans isomerase OS=Morus notabilis GN=L484_024532 PE=3 SV=1	[more]

BLAST of MELO3C024662 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56070.1	3.3e-19	64.62	rotamase cyclophilin 2	[more]
AT2G16600.1	7.4e-19	62.12	rotamase CYP 3	[more]
AT4G34870.1	1.1e-17	59.09	rotamase cyclophilin 5	[more]
AT4G38740.1	3.1e-17	57.58	rotamase CYP 1	[more]
AT2G21130.1	4.1e-17	59.09	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]

BLAST of MELO3C024662 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|743853200\|ref\|XP_010940596.1\|	2.4e-19	71.64	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Elaeis guineensis]	[more]
gi\|731416963\|ref\|XP_010660113.1\|	5.4e-19	73.13	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Vitis vinifera]	[more]
gi\|1009117537\|ref\|XP_015875370.1\|	5.4e-19	72.73	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Ziziphus jujuba]	[more]
gi\|502113766\|ref\|XP_004494752.1\|	5.4e-19	73.85	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Cicer arietinum]	[more]
gi\|976923089\|gb\|KVI07437.1\|	7.0e-19	71.64	Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain-containing protein [...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002130	Cyclophilin-type_PPIase_dom
IPR024936	Cyclophilin-type_PPIase

Vocabulary: **Biological Process**
Term	Definition
GO:0000413	protein peptidyl-prolyl isomerization
GO:0006457	protein folding

Vocabulary: **Molecular Function**
Term	Definition
GO:0003755	peptidyl-prolyl cis-trans isomerase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006364	rRNA processing
biological_process	GO:0023014	signal transduction by protein phosphorylation
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016020	membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009365	protein histidine kinase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016018	cyclosporin A binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0000155	phosphorelay sensor kinase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU57561	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024662T1	MELO3C024662T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU57561	MU57561	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 25..40 score: 8.3E-10coord: 12..24 score: 8.3
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 1..63 score: 2.1
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROFILE	PS50072	CSA_PPIASE_2	coord: 1..64 score: 15
IPR024936	Cyclophilin-type peptidyl-prolyl cis-trans isomerase	PANTHER	PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 1..65 score: 4.8
None	No IPR available	PANTHER	PTHR11071:SF252	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-3-RELATED	coord: 1..65 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C024662	Cla002982	Watermelon (97103) v1	mewmB292
MELO3C024662	ClCG06G009400	Watermelon (Charleston Gray)	mewcgB257
MELO3C024662	Cla97C06G119110	Watermelon (97103) v2	mewmbB264
MELO3C024662	Bhi02G001030	Wax gourd	mewgoB310
MELO3C024662	CSPI01G33580	Wild cucumber (PI 183967)	cpimeB045
MELO3C024662	Cucsa.291670	Cucumber (Gy14) v1	cgymeB484
MELO3C024662	CmaCh10G010110	Cucurbita maxima (Rimu)	cmameB071
MELO3C024662	CmoCh11G010000	Cucurbita moschata (Rifu)	cmomeB102
MELO3C024662	CmoCh10G010660	Cucurbita moschata (Rifu)	cmomeB064
MELO3C024662	Lsi06G007960	Bottle gourd (USVL1VR-Ls)	lsimeB401
MELO3C024662	Cp4.1LG05g08450	Cucurbita pepo (Zucchini)	cpemeB686
MELO3C024662	Cp4.1LG04g01980	Cucurbita pepo (Zucchini)	cpemeB617
MELO3C024662	CsGy1G032230	Cucumber (Gy14) v2	cgybmeB041
MELO3C024662	Carg06116	Silver-seed gourd	carmeB0020
MELO3C024662	CsaV3_1G045550	Cucumber (Chinese Long) v3	cucmeB045

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C024662	Silver-seed gourd	carmeB0896
MELO3C024662	Watermelon (97103) v2	mewmbB262
MELO3C024662	Watermelon (97103) v2	mewmbB266
MELO3C024662	Cucurbita maxima (Rimu)	cmameB109
MELO3C024662	Cucumber (Chinese Long) v2	cumeB045
MELO3C024662	Watermelon (Charleston Gray)	mewcgB259
MELO3C024662	Watermelon (97103) v1	mewmB290