CmoCh11G010000 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G010000
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Peptidyl-prolyl cis-trans isomerase (5.2.1.8)
Location	Cmo_Chr11 : 5366320 .. 5366786 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTGTTCGCCGACACAACTCCAAAATCTGCAGAGAATTTCCGAGCTCTCTGCATTGGGGAGAAGGAAGGGGATTGGGAGATCCGGAAAGCTTTTACACTACAAAGTCTCAACATTTCACTGTGTAATCCCGAACTTCATGTGCCAAGGAGGAGATTTCACAAGGGGTAATGGAACAGGAGGAGAATCAATCTATGGCATGAAGTTTGCAGATGAAAACTAAAAGATGAAACACACCGGACCAGGTGTACTATCAATGGCGAATTCTGGACAGAAACACCAATGGTTCTCAGTTCTTCATTTGTACTGAGAAGACTTCATGGCTGGATGGGAAGCATATTGTGTTTGGAAAAGTTGTAGATGGTTATAATGTAGTCAAGGAGATGGAGAAGGTGGGATCTGATAGTGGGAGGACTTCTGAAACTGTAGTGATAGAGGACTGCGGGCAGATAGATAGCATCTAG

mRNA sequence

ATGGAGCTGTTCGCCGACACAACTCCAAAATCTGCAGAGAATTTCCGAGCTCTCTGCATTGGGGAGAAGGAAGGGGATTGGGAGATCCGGAAAGCTTTTACACTACAAAGTCTCAACATTTCACTGTGTAATCCCGAACTTCATGTGCCAAGGAGGAGATTTCACAAGGGAAACACCAATGGTTCTCAGTTCTTCATTTGTACTGAGAAGACTTCATGGCTGGATGGGAAGCATATTGTGTTTGGAAAAGTTGTAGATGGTTATAATGTAGTCAAGGAGATGGAGAAGGTGGGATCTGATAGTGGGAGGACTTCTGAAACTGTAGTGATAGAGGACTGCGGGCAGATAGATAGCATCTAG

Coding sequence (CDS)

ATGGAGCTGTTCGCCGACACAACTCCAAAATCTGCAGAGAATTTCCGAGCTCTCTGCATTGGGGAGAAGGAAGGGGATTGGGAGATCCGGAAAGCTTTTACACTACAAAGTCTCAACATTTCACTGTGTAATCCCGAACTTCATGTGCCAAGGAGGAGATTTCACAAGGGAAACACCAATGGTTCTCAGTTCTTCATTTGTACTGAGAAGACTTCATGGCTGGATGGGAAGCATATTGTGTTTGGAAAAGTTGTAGATGGTTATAATGTAGTCAAGGAGATGGAGAAGGTGGGATCTGATAGTGGGAGGACTTCTGAAACTGTAGTGATAGAGGACTGCGGGCAGATAGATAGCATCTAG

Homology

[Close]

BLAST of CmoCh11G010000 vs. Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.2e-27
Identity = 69/153 (45.10%), Postives = 85/153 (55.56%), Query Frame = 1


Query: 1   MELFADTTPKSAENFRALCIGEKE--------------------------GDWEIRKAFT 60
           MEL+ADTTP++AENFRALC GEK                           GD+       
Sbjct: 22  MELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTG 81

Query: 61  LQSLNISLCNPELHVPRRRFHKG-----------NTNGSQFFICTEKTSWLDGKHIVFGK 117
            +S+  +    E  + R   H G            TNGSQFFICTEKT WLDGKH+VFGK
Sbjct: 82  AESIYGAKFADENFIKR---HTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGK 141

[Close]

BLAST of CmoCh11G010000 vs. Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-25
Identity = 69/153 (45.10%), Postives = 84/153 (54.90%), Query Frame = 1


Query: 1   MELFADTTPKSAENFRALCIGEKE--------------------------GDWEIRKAFT 60
           MELFADTTPK+AENFRALC GEK                           GD+       
Sbjct: 22  MELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTG 81

Query: 61  LQSLNISLCNPELHVPRRRFHKG-----------NTNGSQFFICTEKTSWLDGKHIVFGK 117
            +S+  +  N E  V +   H G            TNGSQFFICT KT WL+GKH+VFG+
Sbjct: 82  GESIYGAKFNDENFVKK---HTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQ 141

[Close]

BLAST of CmoCh11G010000 vs. Swiss-Prot
Match: PPIF_BOVIN (Peptidyl-prolyl cis-trans isomerase F, mitochondrial OS=Bos taurus GN=PPIF PE=1 SV=3)

HSP 1 Score: 110.9 bits (276), Expect = 9.5e-24
Identity = 64/143 (44.76%), Postives = 83/143 (58.04%), Query Frame = 1


Query: 1   MELFADTTPKSAENFRALCIGEKEGDWE------IRKAFTLQSLNISLCNPE-------L 60
           +EL AD  PK+AENFRALC GEK   ++      +  +F  Q+ + +  N          
Sbjct: 65  LELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGS 124

Query: 61  HVPRRRF---HKG-----------NTNGSQFFICTEKTSWLDGKHIVFGKVVDGYNVVKE 117
             P   F   H+G           NTNGSQFFICT KT WLDGKH+VFG V +G +VVK+
Sbjct: 125 RFPDENFKLKHEGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKK 184

[Close]

BLAST of CmoCh11G010000 vs. Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-23
Identity = 61/143 (42.66%), Postives = 79/143 (55.24%), Query Frame = 1


Query: 1   MELFADTTPKSAENFRALCIGEKE-------------------GDWEIRKAFTLQSL--- 60
           MEL AD  PK+AENFRALC GEK                    GD+        +S+   
Sbjct: 22  MELRADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPGFMCQGGDFTRHNGTGGKSIYGE 81

Query: 61  -----NISLCNPELHVPRRRFHKGNTNGSQFFICTEKTSWLDGKHIVFGKVVDGYNVVKE 117
                N +L + +  +        NTNGSQFFICT  TSWLDGKH+VFG V  G +++K+
Sbjct: 82  KFADENFTLKHTQPGILSMANAGVNTNGSQFFICTAVTSWLDGKHVVFGAVTQGLDIIKK 141

[Close]

BLAST of CmoCh11G010000 vs. Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=2 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 2.1e-23
Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 1


Query: 58  NTNGSQFFICTEKTSWLDGKHIVFGKVVDGYNVVKEMEKVGSDSGRTSETVVIEDCGQI 117
           NTNGSQFFICTEKTSWLDGKH+VFGKVVDGYNVVK ME VGSD G  SE VVIEDCG++
Sbjct: 113 NTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171

[Close]

BLAST of CmoCh11G010000 vs. TrEMBL
Match: A0A078GRH6_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=BnaA09g35540D PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 9.9e-28
Identity = 74/151 (49.01%), Postives = 85/151 (56.29%), Query Frame = 1


Query: 1   MELFADTTPKSAENFRALCIGEKEGDWEIRKAFTLQSLNISLCNPELHVPRRRFHKGN-- 60
           MELFAD TP++A+NFRALC GEK G  +  KA   +        P        F +GN  
Sbjct: 22  MELFADVTPRTADNFRALCTGEK-GIGQAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGT 81

Query: 61  ---------------------------------TNGSQFFICTEKTSWLDGKHIVFGKVV 117
                                            TNGSQFFICT+KT+WLDGKH+VFGKVV
Sbjct: 82  GGESIYGAKFQDENFKLKHTGPGILSMANSGPNTNGSQFFICTDKTAWLDGKHVVFGKVV 141

[Close]

BLAST of CmoCh11G010000 vs. TrEMBL
Match: M4CSM2_BRARP (Peptidyl-prolyl cis-trans isomerase OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 9.9e-28
Identity = 74/151 (49.01%), Postives = 85/151 (56.29%), Query Frame = 1


Query: 1   MELFADTTPKSAENFRALCIGEKEGDWEIRKAFTLQSLNISLCNPELHVPRRRFHKGN-- 60
           MELFAD TP++A+NFRALC GEK G  +  KA   +        P        F +GN  
Sbjct: 22  MELFADVTPRTADNFRALCTGEK-GIGQAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGT 81

Query: 61  ---------------------------------TNGSQFFICTEKTSWLDGKHIVFGKVV 117
                                            TNGSQFFICT+KT+WLDGKH+VFGKVV
Sbjct: 82  GGESIYGAKFQDENFKLKHTGPGILSMANSGPNTNGSQFFICTDKTAWLDGKHVVFGKVV 141

[Close]

BLAST of CmoCh11G010000 vs. TrEMBL
Match: A0A078C5S3_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=BnaC08g26990D PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-27
Identity = 72/151 (47.68%), Postives = 84/151 (55.63%), Query Frame = 1


Query: 1   MELFADTTPKSAENFRALCIGEKEGDWEIRKAFTLQSLNISLCNPELHVPRRRFHKGN-- 60
           MELFAD TP++A+NFRALC GEK G  +  KA   +        P        F +GN  
Sbjct: 22  MELFADVTPRTADNFRALCTGEK-GIGQAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGT 81

Query: 61  ---------------------------------TNGSQFFICTEKTSWLDGKHIVFGKVV 117
                                            TNGSQFFICT+KT+WLDGKH+VFGKVV
Sbjct: 82  GGESIHGAKFHDENFKLKHTGPGILSMANSGPNTNGSQFFICTDKTAWLDGKHVVFGKVV 141

[Close]

BLAST of CmoCh11G010000 vs. TrEMBL
Match: A0A0D3DTJ5_BRAOL (Peptidyl-prolyl cis-trans isomerase OS=Brassica oleracea var. oleracea GN=ROC2 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-27
Identity = 72/151 (47.68%), Postives = 84/151 (55.63%), Query Frame = 1


Query: 1   MELFADTTPKSAENFRALCIGEKEGDWEIRKAFTLQSLNISLCNPELHVPRRRFHKGN-- 60
           MELFAD TP++A+NFRALC GEK G  +  KA   +        P        F +GN  
Sbjct: 22  MELFADVTPRTADNFRALCTGEK-GIGQAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGT 81

Query: 61  ---------------------------------TNGSQFFICTEKTSWLDGKHIVFGKVV 117
                                            TNGSQFFICT+KT+WLDGKH+VFGKVV
Sbjct: 82  GGESIHGAKFHDENFKLKHTGPGILSMANSGPNTNGSQFFICTDKTAWLDGKHVVFGKVV 141

[Close]

BLAST of CmoCh11G010000 vs. TrEMBL
Match: W9RQR8_9ROSA (Peptidyl-prolyl cis-trans isomerase OS=Morus notabilis GN=L484_024532 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.4e-26
Identity = 71/150 (47.33%), Postives = 83/150 (55.33%), Query Frame = 1


Query: 2   ELFADTTPKSAENFRALCIGEKEGDWEIRKAFTLQSLNISLCNPELHVPRRRFHKGN--- 61
           ELF+D TPK+AENFRALC GEK G     K    +        P        F +GN   
Sbjct: 24  ELFSDATPKTAENFRALCTGEK-GIGISGKPLHYKGSTFHRIIPTFMCQGGDFTRGNGTG 83

Query: 62  --------------------------------TNGSQFFICTEKTSWLDGKHIVFGKVVD 117
                                           TNGSQFFICTEKTSWLDGKH+VFGKVVD
Sbjct: 84  GESIYGLKFEDENFKMKHTGPGVLSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVD 143

[Close]

BLAST of CmoCh11G010000 vs. TAIR10
Match: AT3G56070.1 (AT3G56070.1 rotamase cyclophilin 2)

HSP 1 Score: 109.8 bits (273), Expect = 1.2e-24
Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 1


Query: 58  NTNGSQFFICTEKTSWLDGKHIVFGKVVDGYNVVKEMEKVGSDSGRTSETVVIEDCGQI 117
           NTNGSQFFICTEKTSWLDGKH+VFGKVVDGYNVVK ME VGSD G  SE VVIEDCG++
Sbjct: 113 NTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171

[Close]

BLAST of CmoCh11G010000 vs. TAIR10
Match: AT2G16600.1 (AT2G16600.1 rotamase CYP 3)

HSP 1 Score: 108.6 bits (270), Expect = 2.7e-24
Identity = 49/59 (83.05%), Postives = 56/59 (94.92%), Query Frame = 1


Query: 58  NTNGSQFFICTEKTSWLDGKHIVFGKVVDGYNVVKEMEKVGSDSGRTSETVVIEDCGQI 117
           NTNGSQFFICTEKTSWLDGKH+VFG+VV+G NVV+++EKVGSDSGRTS+ VVI DCGQI
Sbjct: 114 NTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQI 172

[Close]

BLAST of CmoCh11G010000 vs. TAIR10
Match: AT4G34870.1 (AT4G34870.1 rotamase cyclophilin 5)

HSP 1 Score: 101.3 bits (251), Expect = 4.3e-22
Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = 1


Query: 58  NTNGSQFFICTEKTSWLDGKHIVFGKVVDGYNVVKEMEKVGSDSGRTSETVVIEDCGQI 117
           NTNGSQFFICT+KTSWLDGKH+VFG+VV G +VVK +EKVGSDSG+TS+ V I DCGQ+
Sbjct: 113 NTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQL 171

[Close]

BLAST of CmoCh11G010000 vs. TAIR10
Match: AT2G21130.1 (AT2G21130.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 95.5 bits (236), Expect = 2.3e-20
Identity = 42/61 (68.85%), Postives = 52/61 (85.25%), Query Frame = 1


Query: 58  NTNGSQFFICTEKTSWLDGKHIVFGKVVDGYNVVKEMEKVGSDSGRTSETVVIEDCGQID 117
           NTNGSQFFICT KT WLDGKH+VFG+VV+G +VVK +EK+GS SG+ ++ VVI DCG+I 
Sbjct: 114 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173

Query: 118 S 119
           S
Sbjct: 174 S 174

[Close]

BLAST of CmoCh11G010000 vs. TAIR10
Match: AT5G13120.1 (AT5G13120.1 cyclophilin 20-2)

HSP 1 Score: 95.5 bits (236), Expect = 2.3e-20
Identity = 58/142 (40.85%), Postives = 74/142 (52.11%), Query Frame = 1


Query: 3   LFADTTPKSAENFRALCIGEKE-------------------GDWEIRKAF--------TL 62
           L+ D  P++ ENFRALC GEK                    GD+E             T 
Sbjct: 113 LYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTF 172

Query: 63  QSLNISLCNPELHVPRRRFHKGNTNGSQFFICTEKTSWLDGKHIVFGKVVDGYNVVKEME 117
           +  N  L +    V        NTNGSQFFICT KTSWLDG+H+VFG+V++G  VVK +E
Sbjct: 173 KDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIE 232

[Close]

BLAST of CmoCh11G010000 vs. NCBI nr
Match: gi|145328732|ref|NP_001077901.1| (cyclophilin ROC3 [Arabidopsis thaliana])

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-30
Identity = 75/131 (57.25%), Postives = 91/131 (69.47%), Query Frame = 1


Query: 1   MELFADTTPKSAENFRALCIGE----KEGDWEIRKAFTLQSLNISLCNPELHVPRRRFHK 60
           MEL+ADTTP++AENFRALC GE    K+GD+        +S+  S    E  + +   H 
Sbjct: 23  MELYADTTPETAENFRALCTGERGIGKQGDFTAGNGTGGESIYGSKFKDENFIKK---HT 82

Query: 61  G-----------NTNGSQFFICTEKTSWLDGKHIVFGKVVDGYNVVKEMEKVGSDSGRTS 117
           G           NTNGSQFFICTEKTSWLDGKH+VFG+VV+G NVV+++EKVGSDSGRTS
Sbjct: 83  GPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTS 142

[Close]

BLAST of CmoCh11G010000 vs. NCBI nr
Match: gi|923714558|ref|XP_013663452.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Brassica napus])

HSP 1 Score: 131.7 bits (330), Expect = 8.3e-28
Identity = 74/151 (49.01%), Postives = 85/151 (56.29%), Query Frame = 1


Query: 1   MELFADTTPKSAENFRALCIGEKEGDWEIRKAFTLQSLNISLCNPELHVPRRRFHKGN-- 60
           MELFAD TP++A+NFRALC GEK G  +  KA   +        P        F +GN  
Sbjct: 22  MELFADVTPRTADNFRALCTGEK-GIGQAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGT 81

Query: 61  ---------------------------------TNGSQFFICTEKTSWLDGKHIVFGKVV 117
                                            TNGSQFFICT+KT+WLDGKH+VFGKVV
Sbjct: 82  GGESIYGAKFQDENFKLKHTGPGILSMANSGPNTNGSQFFICTDKTAWLDGKHVVFGKVV 141

[Close]

BLAST of CmoCh11G010000 vs. NCBI nr
Match: gi|685364205|ref|XP_009116305.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Brassica rapa])

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-27
Identity = 74/151 (49.01%), Postives = 85/151 (56.29%), Query Frame = 1


Query: 1   MELFADTTPKSAENFRALCIGEKEGDWEIRKAFTLQSLNISLCNPELHVPRRRFHKGN-- 60
           MELFAD TP++A+NFRALC GEK G  +  KA   +        P        F +GN  
Sbjct: 22  MELFADVTPRTADNFRALCTGEK-GIGQAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGT 81

Query: 61  ---------------------------------TNGSQFFICTEKTSWLDGKHIVFGKVV 117
                                            TNGSQFFICT+KT+WLDGKH+VFGKVV
Sbjct: 82  GGESIYGAKFQDENFKLKHTGPGILSMANSGPNTNGSQFFICTDKTAWLDGKHVVFGKVV 141

[Close]

BLAST of CmoCh11G010000 vs. NCBI nr
Match: gi|922544674|ref|XP_013600122.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Brassica oleracea var. oleracea])

HSP 1 Score: 129.0 bits (323), Expect = 5.4e-27
Identity = 72/151 (47.68%), Postives = 84/151 (55.63%), Query Frame = 1


Query: 1   MELFADTTPKSAENFRALCIGEKEGDWEIRKAFTLQSLNISLCNPELHVPRRRFHKGN-- 60
           MELFAD TP++A+NFRALC GEK G  +  KA   +        P        F +GN  
Sbjct: 22  MELFADVTPRTADNFRALCTGEK-GIGQAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGT 81

Query: 61  ---------------------------------TNGSQFFICTEKTSWLDGKHIVFGKVV 117
                                            TNGSQFFICT+KT+WLDGKH+VFGKVV
Sbjct: 82  GGESIHGAKFHDENFKLKHTGPGILSMANSGPNTNGSQFFICTDKTAWLDGKHVVFGKVV 141

[Close]

BLAST of CmoCh11G010000 vs. NCBI nr
Match: gi|703121111|ref|XP_010102251.1| (Peptidyl-prolyl cis-trans isomerase CYP19-3 [Morus notabilis])

HSP 1 Score: 126.3 bits (316), Expect = 3.5e-26
Identity = 71/150 (47.33%), Postives = 83/150 (55.33%), Query Frame = 1


Query: 2   ELFADTTPKSAENFRALCIGEKEGDWEIRKAFTLQSLNISLCNPELHVPRRRFHKGN--- 61
           ELF+D TPK+AENFRALC GEK G     K    +        P        F +GN   
Sbjct: 24  ELFSDATPKTAENFRALCTGEK-GIGISGKPLHYKGSTFHRIIPTFMCQGGDFTRGNGTG 83

Query: 62  --------------------------------TNGSQFFICTEKTSWLDGKHIVFGKVVD 117
                                           TNGSQFFICTEKTSWLDGKH+VFGKVVD
Sbjct: 84  GESIYGLKFEDENFKMKHTGPGVLSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVD 143

The following BLAST results are available for this feature:

BLAST of CmoCh11G010000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CYPH_LUPLU	3.2e-27	45.10	Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1	[more]
CYPH_SOLLC	1.3e-25	45.10	Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1	[more]
PPIF_BOVIN	9.5e-24	44.76	Peptidyl-prolyl cis-trans isomerase F, mitochondrial OS=Bos taurus GN=PPIF PE=1 ...	[more]
PPIA_HEMPU	1.6e-23	42.66	Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1	[more]
CP19C_ARATH	2.1e-23	84.75	Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 P...	[more]

BLAST of CmoCh11G010000 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A078GRH6_BRANA	9.9e-28	49.01	Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=BnaA09g35540D PE=3 SV=1	[more]
M4CSM2_BRARP	9.9e-28	49.01	Peptidyl-prolyl cis-trans isomerase OS=Brassica rapa subsp. pekinensis PE=3 SV=1	[more]
A0A078C5S3_BRANA	3.8e-27	47.68	Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=BnaC08g26990D PE=3 SV=1	[more]
A0A0D3DTJ5_BRAOL	3.8e-27	47.68	Peptidyl-prolyl cis-trans isomerase OS=Brassica oleracea var. oleracea GN=ROC2 P...	[more]
W9RQR8_9ROSA	2.4e-26	47.33	Peptidyl-prolyl cis-trans isomerase OS=Morus notabilis GN=L484_024532 PE=3 SV=1	[more]

BLAST of CmoCh11G010000 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56070.1	1.2e-24	84.75	rotamase cyclophilin 2	[more]
AT2G16600.1	2.7e-24	83.05	rotamase CYP 3	[more]
AT4G34870.1	4.3e-22	76.27	rotamase cyclophilin 5	[more]
AT2G21130.1	2.3e-20	68.85	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT5G13120.1	2.3e-20	40.85	cyclophilin 20-2	[more]

BLAST of CmoCh11G010000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|145328732\|ref\|NP_001077901.1\|	1.4e-30	57.25	cyclophilin ROC3 [Arabidopsis thaliana]	[more]
gi\|923714558\|ref\|XP_013663452.1\|	8.3e-28	49.01	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Brassica napus]	[more]
gi\|685364205\|ref\|XP_009116305.1\|	1.4e-27	49.01	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Brassica rapa]	[more]
gi\|922544674\|ref\|XP_013600122.1\|	5.4e-27	47.68	PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Brassica oleracea var. o...	[more]
gi\|703121111\|ref\|XP_010102251.1\|	3.5e-26	47.33	Peptidyl-prolyl cis-trans isomerase CYP19-3 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002130	Cyclophilin-type_PPIase_dom
IPR024936	Cyclophilin-type_PPIase

Vocabulary: **Biological Process**
Term	Definition
GO:0000413	protein peptidyl-prolyl isomerization
GO:0006457	protein folding

Vocabulary: **Molecular Function**
Term	Definition
GO:0003755	peptidyl-prolyl cis-trans isomerase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006364	rRNA processing
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0016018	cyclosporin A binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G010000.1	CmoCh11G010000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 56..114 score: 8.8
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROFILE	PS50072	CSA_PPIASE_2	coord: 1..115 score: 15
IPR024936	Cyclophilin-type peptidyl-prolyl cis-trans isomerase	PANTHER	PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 1..116 score: 1.6
None	No IPR available	PANTHER	PTHR11071:SF252	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-3-RELATED	coord: 1..116 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh11G010000	MELO3C024662	Melon (DHL92) v3.5.1	cmomeB102
CmoCh11G010000	Lsi06G007960	Bottle gourd (USVL1VR-Ls)	cmolsiB118
CmoCh11G010000	Cp4.1LG04g01980	Cucurbita pepo (Zucchini)	cmocpeB127
CmoCh11G010000	Cp4.1LG05g08450	Cucurbita pepo (Zucchini)	cmocpeB133
CmoCh11G010000	MELO3C024662.2	Melon (DHL92) v3.6.1	cmomedB110
CmoCh11G010000	CsaV3_1G045550	Cucumber (Chinese Long) v3	cmocucB0090
CmoCh11G010000	Bhi02G001030	Wax gourd	cmowgoB0162
CmoCh11G010000	CsGy1G032230	Cucumber (Gy14) v2	cgybcmoB027
CmoCh11G010000	Carg16479	Silver-seed gourd	carcmoB1222

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh11G010000	CmoCh10G010660	Cucurbita moschata (Rifu)	cmocmoB047

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G010000	Cucumber (Chinese Long) v3	cmocucB0118
CmoCh11G010000	Watermelon (97103) v2	cmowmbB125
CmoCh11G010000	Wax gourd	cmowgoB0100
CmoCh11G010000	Cucurbita moschata (Rifu)	cmocmoB086
CmoCh11G010000	Cucumber (Gy14) v1	cgycmoB0810
CmoCh11G010000	Cucurbita maxima (Rimu)	cmacmoB073
CmoCh11G010000	Cucurbita maxima (Rimu)	cmacmoB077
CmoCh11G010000	Cucurbita maxima (Rimu)	cmacmoB112
CmoCh11G010000	Wild cucumber (PI 183967)	cmocpiB083
CmoCh11G010000	Cucumber (Chinese Long) v2	cmocuB075
CmoCh11G010000	Watermelon (Charleston Gray)	cmowcgB121
CmoCh11G010000	Bottle gourd (USVL1VR-Ls)	cmolsiB084