Cucsa.291670 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCATCGCATTCTCCAGACCTTACCTTCAACTTCCTCAAAGGTAGATTCTTTCTTCATCATTGATTTCTTCTCTACTCAAGCGAATTTGAGAACTCTTCGTTCTGCAATTGCACATATCGAAGGCTTTCAGGTTCATTGTATAAATGCCTGCTGAGCTCAATACTTGTGCCATATTATTTCATCGTCTTTTGCTCTCTTAGCACGTTCTTTTCAGTCTATCGACCGATTTCGTGTCCGCCCTCTACGGGATTTGAGAGTGATGACGAACATTTTCTGATACATCTTTCACCCTTCTTTGATTGGGGGATTTTCTATTTTCTTATTCTTTGCCAGAGTTGGAATTGTATTGATATTTCTATTAATTGTTTCTGCTTTTtAGTTTTtCTGTCTTTTTtCCCCCACTGCTTATGCTTGTCGATGTGATTCAGATTACTTAAGTCTCTTGAGAGTGTGATGAATTGCATGCTGGTTTATCTGTAGATTACTTTAAGTGTTTTGTATTGTTGACATGAATACTATAATTTCGGATCTTTGGTATTAGAAAATACGCTGTCGAAAACTATATGGAGGTCATTTGTAAAGTAATGACAAGCAATAGGGTTATTTTCTGGGTAATGGGGTGTTAAGGATTGTGTTTCAAATAAATCAGATCTGAAGTATTTGCTGAAAATTTTGTTTGAGACACAACGTAAAGTAATTTCGAGTATTATTTATTTGAATGCCTTTTGAATAATCCTTAATTATCAAAATAAGCATGCTTTGCTTTCTATTGACTGATGTTTAGTGTAGAAGACGGTTTTGAAGTTAATCGGGGCTGAAAATTCTAATCTGAAAATTGGATCTTTGAGACACTCCTTCAAGTTAATCTTATGGCCACCGTTTTCAAGTGTGGTTTTACTCGAAAAGCATGATTATCTCAAGTTGTTTGTATATAGTAGGATTGTCATTTAACCGTGCTATTTTCTAATTATATTTTAATAATTATCTTTTGAAGAATCTCTAATTGTGAAAAAAAAaGCAAACGTGTTGTTTTTACTTTCTATCGAGTGATTTGTTAAGGATGGAAAAAGCTGAAGATTGTAATTTGACAGAAACCAATTTGAAGTTTGGGAGCAGTAGAAGAGAAGAGAGCAATGACCAACCCAAAAGTTTTCTTGGACATTCTGATTGGGAGGGTGAAAGCAGGCCGGATTGTCATGGAGTTATTTGCAGACACAACTCCAAAAACCGCTGAGAATTTCCGAGCCCTCTGCACGGGAGAGAAGGGGATTGGAAGATCTGGGAAACCACTGCACTATAAAGGCTCAAAATTTCACCGTATAATTCCAGATTTCATGTGCCAAGGAGGAGATTTCACAAAGTCTAATGGAACAGGAGGAGAATCAATCTATGGCTTGAAATTTGCAGATGAAAACTTTAAGTTGAAACACACTGGACCAGGTATGGTATCAATGGCGAATGCTGGACCAAACACCAATGGTTCTCAGTTCTTCATTTCCACTTCGGGGCCATTGTCATGGCTTGATGGGAAGCATGTTGTGTTTGGCAAAGTTGTGGATGGTTATGATGTGGTGGAGAAGATGAATGAGAAGGGTACAGAATCGGGGGACCCTAAGGTTCCAGTTGTGATTGAAGATTGTGGGCAGATAACTGAGAGCTGAAGTAGAATTTCCCCTTTCAATTGAAGCTAATGTTTCTTTGGGTGATCCCTGTAGATTGGATTAACAATTTAAATCAGCACCATGTTAGTCCGTAAGTACCACGTCAATGTGGAGTTATATTAAAAAATTAACAATTTTTtGAAAAGGGACATTTTTAAAAATCAAAAGTTTTGGATTCTATAGATACTTTCTATCATGAAaaTAGAGGGAGAGGAGGAGAAGAGTAGGGTTTGCTAAACTTTTTCTTTTTGCATTTTGAGAGGGAAGTGAAAATGAGGGAGGGAAACAAAAAAAaTTAAATTAAAAAAaTCATTTATGTTTTCATAAAAATATCACATTTGAAAAATGACAAGAAAATATAGATTCAACTATGTTGTTAAAACATCGAGTAAATAGTAGCATGGAAAATATCTGAAAAATCGTCTCATCTTCGTGTTTTTTtAAAAATTATTTAAGTTTTGTTAAAAATCATCAATTACTTGATGTTTTTATTTTtATTAAAAACGTCAAGTATTTGAAATTGCAAAATGCAAATATTAAGAGAGGTTGTTTTTCTAGCTGTGCTTGTATTTCAGGTATA TTTTCATCGCATTCTCCAGACCTTACCTTCAACTTCCTCAAAGAAACCAATTTGAAGTTTGGGAGCAGTAGAAGAGAAGAGAGCAATGACCAACCCAAAAGTTTTCTTGGACATTCTGATTGGGAGGGTGAAAGCAGGCCGGATTGTCATGGAGTTATTTGCAGACACAACTCCAAAAACCGCTGAGAATTTCCGAGCCCTCTGCACGGGAGAGAAGGGGATTGGAAGATCTGGGAAACCACTGCACTATAAAGGCTCAAAATTTCACCGTATAATTCCAGATTTCATGTGCCAAGGAGGAGATTTCACAAAGTCTAATGGAACAGGAGGAGAATCAATCTATGGCTTGAAATTTGCAGATGAAAACTTTAAGTTGAAACACACTGGACCAGGTATGGTATCAATGGCGAATGCTGGACCAAACACCAATGGTTCTCAGTTCTTCATTTCCACTTCGGGGCCATTGTCATGGCTTGATGGGAAGCATGTTGTGTTTGGCAAAGTTGTGGATGGTTATGATGTGGTGGAGAAGATGAATGAGAAGGGTACAGAATCGGGGGACCCTAAGGTTCCAGTTGTGATTGAAGATTGTGGGCAGATAACTGAGAGCTGAAGTAGAATTTCCCCTTTCAATTGAAGCTAATGTTTCTTTGGGTGATCCCTGTAGATTGGATTAACAATTTAAATCAGCACCATGTTAGTCCGTAAGTACCACGTCAATGTGGAGTTATATTAAAAAATTAACAATTTTTTGAAAAGGGACATTTTTAAAAATCAAAAGTTTTGGATTCTATAGATACTTTCTATCATGAAAATAGAGGGAGAGGAGGAGAAGAGTAGGGTTTGCTAAACTTTTTCTTTTTGCATTTTGAGAGGGAAGTGAAAATGAGGGAGGGAAACaaaaaaaattaaattaaaaaaatcatttatgttttcataaaaatatCACATTTGAAAAATGACAAGAAAATATAGATTCAACTATGTTGTTaaaacatcgagtaaatagtagcatggaaaatatctgaaaaatcgtctcatcttcgtgtttttttaaaaattatttaagttttgttaaaaatcatcaattacttgatgtttttatttttattaaaaacgtcaagtatttgaaattgcaaaatgcaaatattaagagaggttgtttttctagCTGTGCTTGTATTTCAGGTATA ATGACCAACCCAAAAGTTTTCTTGGACATTCTGATTGGGAGGGTGAAAGCAGGCCGGATTGTCATGGAGTTATTTGCAGACACAACTCCAAAAACCGCTGAGAATTTCCGAGCCCTCTGCACGGGAGAGAAGGGGATTGGAAGATCTGGGAAACCACTGCACTATAAAGGCTCAAAATTTCACCGTATAATTCCAGATTTCATGTGCCAAGGAGGAGATTTCACAAAGTCTAATGGAACAGGAGGAGAATCAATCTATGGCTTGAAATTTGCAGATGAAAACTTTAAGTTGAAACACACTGGACCAGGTATGGTATCAATGGCGAATGCTGGACCAAACACCAATGGTTCTCAGTTCTTCATTTCCACTTCGGGGCCATTGTCATGGCTTGATGGGAAGCATGTTGTGTTTGGCAAAGTTGTGGATGGTTATGATGTGGTGGAGAAGATGAATGAGAAGGGTACAGAATCGGGGGACCCTAAGGTTCCAGTTGTGATTGAAGATTGTGGGCAGATAACTGAGAGCTGA MTNPKVFLDILIGRVKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSKFHRIIPDFMCQGGDFTKSNGTGGESIYGLKFADENFKLKHTGPGMVSMANAGPNTNGSQFFISTSGPLSWLDGKHVVFGKVVDGYDVVEKMNEKGTESGDPKVPVVIEDCGQITES*
BLAST of Cucsa.291670 vs. Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=2 SV=2) HSP 1 Score: 280.4 bits (716), Expect = 1.3e-74 Identity = 131/172 (76.16%), Postives = 149/172 (86.63%), Query Frame = 1
BLAST of Cucsa.291670 vs. Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=1 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 7.6e-70 Identity = 126/173 (72.83%), Postives = 143/173 (82.66%), Query Frame = 1
BLAST of Cucsa.291670 vs. Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.0e-69 Identity = 124/172 (72.09%), Postives = 144/172 (83.72%), Query Frame = 1
BLAST of Cucsa.291670 vs. Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.0e-69 Identity = 125/172 (72.67%), Postives = 140/172 (81.40%), Query Frame = 1
BLAST of Cucsa.291670 vs. Swiss-Prot
Match: CYP1_SOYBN (Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max GN=Cyp1 PE=2 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 6.5e-69 Identity = 124/171 (72.51%), Postives = 140/171 (81.87%), Query Frame = 1
BLAST of Cucsa.291670 vs. TrEMBL
Match: A0A0A0M0H2_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_1G690270 PE=3 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 1.3e-97 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1
BLAST of Cucsa.291670 vs. TrEMBL
Match: A9PA45_POPTR (Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0078s00220g PE=2 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 7.7e-77 Identity = 139/175 (79.43%), Postives = 155/175 (88.57%), Query Frame = 1
BLAST of Cucsa.291670 vs. TrEMBL
Match: B5LWR0_ZIZJJ (Peptidyl-prolyl cis-trans isomerase OS=Ziziphus jujuba GN=CyP PE=2 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.0e-76 Identity = 140/173 (80.92%), Postives = 154/173 (89.02%), Query Frame = 1
BLAST of Cucsa.291670 vs. TrEMBL
Match: A0A061F2Q5_THECC (Peptidyl-prolyl cis-trans isomerase OS=Theobroma cacao GN=TCM_026248 PE=3 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.0e-76 Identity = 141/175 (80.57%), Postives = 153/175 (87.43%), Query Frame = 1
BLAST of Cucsa.291670 vs. TrEMBL
Match: B9S7J2_RICCO (Peptidyl-prolyl cis-trans isomerase OS=Ricinus communis GN=RCOM_0608620 PE=3 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 1.3e-76 Identity = 141/175 (80.57%), Postives = 155/175 (88.57%), Query Frame = 1
BLAST of Cucsa.291670 vs. TAIR10
Match: AT3G56070.1 (AT3G56070.1 rotamase cyclophilin 2) HSP 1 Score: 280.4 bits (716), Expect = 7.6e-76 Identity = 131/172 (76.16%), Postives = 149/172 (86.63%), Query Frame = 1
BLAST of Cucsa.291670 vs. TAIR10
Match: AT2G21130.1 (AT2G21130.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 264.2 bits (674), Expect = 5.6e-71 Identity = 124/172 (72.09%), Postives = 144/172 (83.72%), Query Frame = 1
BLAST of Cucsa.291670 vs. TAIR10
Match: AT2G16600.1 (AT2G16600.1 rotamase CYP 3) HSP 1 Score: 261.5 bits (667), Expect = 3.6e-70 Identity = 124/172 (72.09%), Postives = 142/172 (82.56%), Query Frame = 1
BLAST of Cucsa.291670 vs. TAIR10
Match: AT4G38740.1 (AT4G38740.1 rotamase CYP 1) HSP 1 Score: 255.4 bits (651), Expect = 2.6e-68 Identity = 120/173 (69.36%), Postives = 141/173 (81.50%), Query Frame = 1
BLAST of Cucsa.291670 vs. TAIR10
Match: AT4G34870.1 (AT4G34870.1 rotamase cyclophilin 5) HSP 1 Score: 247.3 bits (630), Expect = 7.1e-66 Identity = 118/173 (68.21%), Postives = 137/173 (79.19%), Query Frame = 1
BLAST of Cucsa.291670 vs. NCBI nr
Match: gi|449449549|ref|XP_004142527.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like [Cucumis sativus]) HSP 1 Score: 363.6 bits (932), Expect = 1.9e-97 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1
BLAST of Cucsa.291670 vs. NCBI nr
Match: gi|747061517|ref|XP_011077231.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Sesamum indicum]) HSP 1 Score: 301.6 bits (771), Expect = 9.0e-79 Identity = 144/174 (82.76%), Postives = 156/174 (89.66%), Query Frame = 1
BLAST of Cucsa.291670 vs. NCBI nr
Match: gi|743880695|ref|XP_011036276.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Populus euphratica]) HSP 1 Score: 297.7 bits (761), Expect = 1.3e-77 Identity = 141/175 (80.57%), Postives = 156/175 (89.14%), Query Frame = 1
BLAST of Cucsa.291670 vs. NCBI nr
Match: gi|743853200|ref|XP_010940596.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Elaeis guineensis]) HSP 1 Score: 296.2 bits (757), Expect = 3.8e-77 Identity = 141/175 (80.57%), Postives = 152/175 (86.86%), Query Frame = 1
BLAST of Cucsa.291670 vs. NCBI nr
Match: gi|657958421|ref|XP_008370733.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like [Malus domestica]) HSP 1 Score: 295.8 bits (756), Expect = 4.9e-77 Identity = 141/174 (81.03%), Postives = 154/174 (88.51%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|