Cp4.1LG01g23970 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTATTTGATAGCAGCGGCTGTAATTGGAGGTGTTTTGAGTTTGATTCAAATCATTCTCAGCATTTACCATATGGTTACCAAAAGCGAAGGAACTCCGCTCTTTTATTTGTTCAGCGATTACGTAAGTGCATGCAAAAAAGTGTTTTTAAGAACTTGAAAAGTTTGTTTTCGATGAATCTTACACGATGTTATTGTATGTAGTTGTTGTCGTATCTGTTGTTATCGAGCTCGTCGGCAGCGTTAGGAGCTGGGATCGATATGAGAGCTAATTTGAAGGAGCTGTTTGGAACGCTTTTCGACTCGTTTTTCGACCAGGGGAGTGGTGCAGCTGCTGTTCTTTTTATTGCATTCGTTTGCGCTGCTGTTGTCTCAATTCTCTCTGCATTGGCCCTCATCAGGAAGCCTTGAATCAGTGATGGTTTCTTTGTCTGATAAATTATGATCATTTTTATTTACCTTTTGTATGTGTGTATCCTTTTCCATTTTTAATTTGTAATATGTGATTTAGATTAATGAATATCTAATTTGATCGAATTAATTCTGTCTCAATCACCCGATATTCAACATAATTTTGTTTTCAACCATCATACATCATCGATGTTTAATATATTTTTCAAAAGAATATTTCATGTCGATTGGAAAGAGGAACGCGTGCTTGCGAGAATGCTGAGTTTGGAAGGGGATGAATTGTGAGATCTGACGTTTGTTGGAGAGAGAAGCTAACCATTTTTATGTGTAGAAACCTCTCCTGGTCAACAAAGTTTTAAAAATTTCGAGGGAAAGAAAGTTCGAACAAACAATATCTATTAACAGTGGACTTGAGCGGTTATTGAAAGAAGCTTATGAATTTGAAATAGCCTACTTCTTTCAATAACTAACTTAGTCCAAAATATAACTTTGGGTGCACGATGATTCGAAAAAATTATATTCAATTATTAAAAAGATGACTAATGCAAATATTCTAAGATATTTAAAGAAAACATCGCGAATTTTATAATGACAGAATTAAATAATGTATAGAGTAAGACAGATGAAGAGAATTTCACCTTATTTTCCAATTTTATGAACTAAGATTAATGATTAAATATTGAATTCTAATGACATAGTCCATAATTTAAATACTTTATTAAAAAAAAAATGGATTCTCAATCCATTTGGAAATATTATAGAATATAAGTTATAGATAATTTCCATTATTTATTTATTTTTTGAAAATCTTGAGATGAACATAATAAATAAAAAATTGGCCAAGAAAATACCAAGTCCAGCTTTTATATATATATATATATATATAAAAGTATATGTGTGTGTATATAGTAAAAGTTGAAGAGCAAAATTTAGAAGGGTGGAAGGAGGAGATGGAAGGGTCAAAGGGCTCAAGAATTGCTTCACTGATTCTAAGAATTCTGACCTTCATTTTGATCTTCATTTCTCTCATAATCAACGCCACCAATTCCAAAACTTTCAACAAAGGCGCTCAAAATGAAACAAAATTTAAGTTCAAAGATGTTTATTCTTATCGGTAAGTGTGTTCTTAAATATGTTTTTTCTTTTAGAATTCTCAGCTATTTTTTATTCAATCTGATTCGGTTTATGTATAGATATTTGATATCAACCATGATTATTGGAGCTGTTTTGAGTCTACTTCAAATCGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTCCTCTTCGATATGTTCAGTGACAAGGTGAGTATAGTAATATTTGTTTAAGCTTTTGAGATTTAAGGGTGTTTGATGTTATGTTATGTCGTGTCATGTAGCTGTTGTCGTATCTTCTACTGTCGGGGGCCTCGGCGGGGTTAGGCGCTGGCATCGATTTGAGAGTCGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTCGACAAGGGAAATGCTTCGGCGGCTGTTCTTCTCCTTGCGTTTATTTGCGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCT TTATTTGATAGCAGCGGCTGTAATTGGAGGTGTTTTGAGTTTGATTCAAATCATTCTCAGCATTTACCATATGGTTACCAAAAGCGAAGGAACTCCGCTCTTTTATTTGTTCAGCGATTACTTGTTGTCGTATCTGTTGTTATCGAGCTCGTCGGCAGCGTTAGGAGCTGGGATCGATATGAGAGCTAATTTGAAGGAGCTGTTTGGAACGCTTTTCGACTCGTTTTTCGACCAGGGGAGTGGTGCAGCTGCTGTTCTTTTTATTGCATTCGTTTGCGCTGCTGTTGGCTCAAGAATTGCTTCACTGATTCTAAGAATTCTGACCTTCATTTTGATCTTCATTTCTCTCATAATCAACGCCACCAATTCCAAAACTTTCAACAAAGGCGCTCAAAATGAAACAAAATTTAAGTTCAAAGATGTTTATTCTTATCGATATTTGATATCAACCATGATTATTGGAGCTGTTTTGAGTCTACTTCAAATCGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTCCTCTTCGATATGTTCAGTGACAAGCTGTTGTCGTATCTTCTACTGTCGGGGGCCTCGGCGGGGTTAGGCGCTGGCATCGATTTGAGAGTCGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTCGACAAGGGAAATGCTTCGGCGGCTGTTCTTCTCCTTGCGTTTATTTGCGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCT ATGGTTACCAAAAGCGAAGGAACTCCGCTCTTTTATTTGTTCAGCGATTACTTGTTGTCGTATCTGTTGTTATCGAGCTCGTCGGCAGCGTTAGGAGCTGGGATCGATATGAGAGCTAATTTGAAGGAGCTGTTTGGAACGCTTTTCGACTCGTTTTTCGACCAGGGGAGTGGTGCAGCTGCTGTTCTTTTTATTGCATTCGTTTGCGCTGCTGTTGGCTCAAGAATTGCTTCACTGATTCTAAGAATTCTGACCTTCATTTTGATCTTCATTTCTCTCATAATCAACGCCACCAATTCCAAAACTTTCAACAAAGGCGCTCAAAATGAAACAAAATTTAAGTTCAAAGATGTTTATTCTTATCGATATTTGATATCAACCATGATTATTGGAGCTGTTTTGAGTCTACTTCAAATCGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTCCTCTTCGATATGTTCAGTGACAAGCTGTTGTCGTATCTTCTACTGTCGGGGGCCTCGGCGGGGTTAGGCGCTGGCATCGATTTGAGAGTCGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTCGACAAGGGAAATGCTTCGGCGGCTGTTCTTCTCCTTGCGTTTATTTGCGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCT MVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLKELFGTLFDSFFDQGSGAAAVLFIAFVCAAVGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP
BLAST of Cp4.1LG01g23970 vs. Swiss-Prot
Match: CSPLC_SOYBN (CASP-like protein 4D1 OS=Glycine max PE=2 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.7e-24 Identity = 74/166 (44.58%), Postives = 110/166 (66.27%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. Swiss-Prot
Match: CSPLE_RICCO (CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 3.1e-23 Identity = 69/161 (42.86%), Postives = 104/161 (64.60%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. Swiss-Prot
Match: CSPLL_POPTR (CASP-like protein 4D1 OS=Populus trichocarpa GN=POPTR_0010s21230g PE=2 SV=2) HSP 1 Score: 107.5 bits (267), Expect = 2.0e-22 Identity = 67/162 (41.36%), Postives = 103/162 (63.58%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. Swiss-Prot
Match: CSPLB_ARATH (CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.9e-20 Identity = 67/165 (40.61%), Postives = 102/165 (61.82%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. Swiss-Prot
Match: CSPLL_ARALL (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903204 PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 5.5e-20 Identity = 64/164 (39.02%), Postives = 103/164 (62.80%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. TrEMBL
Match: A0A0A0KS88_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515020 PE=3 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 3.3e-43 Identity = 107/162 (66.05%), Postives = 130/162 (80.25%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. TrEMBL
Match: A0A0A0KNU7_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515030 PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 7.2e-43 Identity = 109/161 (67.70%), Postives = 127/161 (78.88%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. TrEMBL
Match: A0A0A0KU83_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515010 PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 7.3e-27 Identity = 78/157 (49.68%), Postives = 104/157 (66.24%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. TrEMBL
Match: W9SGV0_9ROSA (CASP-like protein OS=Morus notabilis GN=L484_009956 PE=3 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 5.8e-24 Identity = 72/158 (45.57%), Postives = 107/158 (67.72%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. TrEMBL
Match: M5XNH4_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa020447mg PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.7e-23 Identity = 76/158 (48.10%), Postives = 105/158 (66.46%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. TAIR10
Match: AT2G39518.1 (AT2G39518.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 100.9 bits (250), Expect = 1.1e-21 Identity = 67/165 (40.61%), Postives = 102/165 (61.82%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. TAIR10
Match: AT2G39530.1 (AT2G39530.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 96.3 bits (238), Expect = 2.6e-20 Identity = 65/166 (39.16%), Postives = 104/166 (62.65%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. NCBI nr
Match: gi|449450002|ref|XP_004142753.1| (PREDICTED: CASP-like protein 4D1 [Cucumis sativus]) HSP 1 Score: 183.3 bits (464), Expect = 4.7e-43 Identity = 107/162 (66.05%), Postives = 130/162 (80.25%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. NCBI nr
Match: gi|659117983|ref|XP_008458889.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]) HSP 1 Score: 183.3 bits (464), Expect = 4.7e-43 Identity = 108/162 (66.67%), Postives = 130/162 (80.25%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. NCBI nr
Match: gi|700196121|gb|KGN51298.1| (hypothetical protein Csa_5G515030 [Cucumis sativus]) HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42 Identity = 109/161 (67.70%), Postives = 127/161 (78.88%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. NCBI nr
Match: gi|659117979|ref|XP_008458887.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]) HSP 1 Score: 145.6 bits (366), Expect = 1.1e-31 Identity = 80/161 (49.69%), Postives = 119/161 (73.91%), Query Frame = 1
BLAST of Cp4.1LG01g23970 vs. NCBI nr
Match: gi|659117986|ref|XP_008458890.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]) HSP 1 Score: 130.2 bits (326), Expect = 4.7e-27 Identity = 77/157 (49.04%), Postives = 106/157 (67.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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