CmaCh15G003950 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G003950
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	CASP-like protein
Location	Cma_Chr15 : 1769681 .. 1770380 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCAAAAATGGAAGCTAAAATGGGTACCAAAATTGCTTCTTTTGTGCTCAGAGTTCTCACCTTCGTCTTCCTCTTAATTTCCATCATCGTTCTTGGAACCACTTCCAAGACCGTAGGAGATGAGAAGCTTCAATTCCATAATGTCAATTCCTATAGGTATTTATTTATTTATTTCCATTTATTTCTATTGGGTTTCATGATTTGTTAATTATTATTATTCTTATTAATTTTGAAAAAAAAAATTCAAAATTTGAAGGTTTGCAATGGCGACCATCATCATTGGAGGAGCTTTCAACCTCTTGCAAATAGCCTTAGCCCTTTATCGTCTCATAACCAAAACCGACGGCGGTGTTTTATTCGACTTCTTCGGTGATAAGGTTTTGTCGTACTTTCTGCTGGCGGGAGCGGCGGCGGCGCTGGGTTCTACCATAGACTTGAAGGCCAATATTGATTGGTTGAACTCGTTTTTCGACCAAGGCAACGCCGCTGCGGCTCTTCTTCTTCTTGCCTTTTTATGCAGTGCTGTGGTTTCTGTTCTTTCCTCTTTTGCCCTTTCTCACAAACCTACTTAGTTTTGTTTTTAATTTATTGCAATATTCATACTACAATCTTTGTCGGACATCCTTTTATCAAATTCTTTCTTGTTTTATGTTCAATTATTAAATCAAATTTAATTATTTGGGTCATAAATTATTTCAAC

mRNA sequence

AGCAAAAATGGAAGCTAAAATGGGTACCAAAATTGCTTCTTTTGTGCTCAGAGTTCTCACCTTCGTCTTCCTCTTAATTTCCATCATCGTTCTTGGAACCACTTCCAAGACCGTAGGAGATGAGAAGCTTCAATTCCATAATGTCAATTCCTATAGGTTTGCAATGGCGACCATCATCATTGGAGGAGCTTTCAACCTCTTGCAAATAGCCTTAGCCCTTTATCGTCTCATAACCAAAACCGACGGCGGTGTTTTATTCGACTTCTTCGGTGATAAGGTTTTGTCGTACTTTCTGCTGGCGGGAGCGGCGGCGGCGCTGGGTTCTACCATAGACTTGAAGGCCAATATTGATTGGTTGAACTCGTTTTTCGACCAAGGCAACGCCGCTGCGGCTCTTCTTCTTCTTGCCTTTTTATGCAGTGCTGTGGTTTCTGTTCTTTCCTCTTTTGCCCTTTCTCACAAACCTACTTAGTTTTGTTTTTAATTTATTGCAATATTCATACTACAATCTTTGTCGGACATCCTTTTATCAAATTCTTTCTTGTTTTATGTTCAATTATTAAATCAAATTTAATTATTTGGGTCATAAATTATTTCAAC

Coding sequence (CDS)

ATGGAAGCTAAAATGGGTACCAAAATTGCTTCTTTTGTGCTCAGAGTTCTCACCTTCGTCTTCCTCTTAATTTCCATCATCGTTCTTGGAACCACTTCCAAGACCGTAGGAGATGAGAAGCTTCAATTCCATAATGTCAATTCCTATAGGTTTGCAATGGCGACCATCATCATTGGAGGAGCTTTCAACCTCTTGCAAATAGCCTTAGCCCTTTATCGTCTCATAACCAAAACCGACGGCGGTGTTTTATTCGACTTCTTCGGTGATAAGGTTTTGTCGTACTTTCTGCTGGCGGGAGCGGCGGCGGCGCTGGGTTCTACCATAGACTTGAAGGCCAATATTGATTGGTTGAACTCGTTTTTCGACCAAGGCAACGCCGCTGCGGCTCTTCTTCTTCTTGCCTTTTTATGCAGTGCTGTGGTTTCTGTTCTTTCCTCTTTTGCCCTTTCTCACAAACCTACTTAG

Protein sequence

MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT

Homology

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BLAST of CmaCh15G003950 vs. Swiss-Prot
Match: CSPLC_SOYBN (CASP-like protein 4D1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-28
Identity = 70/154 (45.45%), Postives = 111/154 (72.08%), Query Frame = 1


Query: 6   GTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDE--KLQFHNVNSYRFAMATIIIGGAFN 65
           G++    +LRVLTFVFLLI++I++    +T  +   +++F+++ +YR+ ++TIIIG A+N
Sbjct: 16  GSRTVLLLLRVLTFVFLLIALILIAIVKQTDDETGVEIKFNDIYAYRYMISTIIIGFAYN 75

Query: 66  LLQIALALYRLITKT-----DGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLN 125
           LLQ+AL+++ +++       DGG LFDFFGDK++SY L++G+AA  G T++L   +   N
Sbjct: 76  LLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELGRGVP-SN 135

Query: 126 SFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 153
           SF D+ NA+A+LLL+AFL +AV S  +SFAL  K
Sbjct: 136 SFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

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BLAST of CmaCh15G003950 vs. Swiss-Prot
Match: CSPLE_RICCO (CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.0e-26
Identity = 68/157 (43.31%), Postives = 108/157 (68.79%), Query Frame = 1


Query: 5   MGTKIASFVLRVLTFVFLLISIIVLGTTSKTVG----DEKLQFHNVNSYRFAMATIIIGG 64
           + +++A+ +LR+LTF+FL+ S+++L T + T+     + K+ F +V +YR+ +ATI+IG 
Sbjct: 8   LASRMAALILRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVIGL 67

Query: 65  AFNLLQIALALYRLITKT-----DGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLK---A 124
           A+ +LQIA  LY + T       DG + FDFFGDKV+SY L+ GAAA   ST D+K   +
Sbjct: 68  AYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPVFS 127

Query: 125 NIDWLNSFFDQGNAAAALLLLAFLCSAVVSVLSSFAL 150
                ++F ++G A+A+LLL+ F+C+AV+SV SS+AL
Sbjct: 128 GSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of CmaCh15G003950 vs. Swiss-Prot
Match: CSPLL_POPTR (CASP-like protein 4D1 OS=Populus trichocarpa GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-24
Identity = 69/160 (43.12%), Postives = 106/160 (66.25%), Query Frame = 1


Query: 5   MGTKIASFVLRVLTFVFLLISIIVLGTTSKTVG---DE-KLQFHNVNSYRFAMATIIIGG 64
           M +++ +  LRVLTF FL++S++++ T + T+    DE K++  +  SYR+ +A I  G 
Sbjct: 17  MVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGIDEFKVRSKDFYSYRYMLAAIAFGL 76

Query: 65  AFNLLQIALALYRLI------TKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANI 124
            + +LQIAL L  +       T  DG ++FDF+GDKV+SY L  GAAAA G+T +LK  +
Sbjct: 77  TYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKELKTQL 136

Query: 125 DWL--NSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 153
             L  + FF++G A+A+LLLL F+C+A++SV SS+AL  K
Sbjct: 137 AGLGGDKFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

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BLAST of CmaCh15G003950 vs. Swiss-Prot
Match: PIMP1_CAPAN (CASP-like protein PIMP1 OS=Capsicum annuum GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-22
Identity = 66/149 (44.30%), Postives = 96/149 (64.43%), Query Frame = 1


Query: 11  SFVLRVLTFVFLLISIIVLGTTSKTV----GDEKLQFHNVNSYRFAMATIIIGGAFNLLQ 70
           S ++R+LT + LLIS IV+ T ++TV    GD K++F +  +YR+ +AT+IIG A+ LLQ
Sbjct: 14  SLIVRILTLICLLISFIVIATNNQTVSTVAGDVKIKFKDFYAYRYLIATVIIGMAYTLLQ 73

Query: 71  IALALYRLITKT----DGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLK--ANIDWLNSF 130
           IA ++  L T      +G +LFDF+GDK +SYFL+ GAAA+ G T DLK     D  + F
Sbjct: 74  IAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMTQDLKQLEGSDNYSKF 133

Query: 131 FDQGNAAAALLLLAFLCSAVVSVLSSFAL 150
            +  NAAA+L L+ F  +   S+ SS+ L
Sbjct: 134 LNTSNAAASLCLIGFFFAVASSIFSSYNL 162

[Close]

BLAST of CmaCh15G003950 vs. Swiss-Prot
Match: CSPLB_ARATH (CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.4e-19
Identity = 60/160 (37.50%), Postives = 94/160 (58.75%), Query Frame = 1


Query: 8   KIASFVLRVLTFVFLLISIIVLGTTSKTVGDE----KLQFHNVNSYRFAMATIIIGGAFN 67
           K+   +LRVLT VFL+I++I+L T S T+  +    K  F +V +YR+ ++  +IG  + 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYA 73

Query: 68  LLQIALALYRLIT--KTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANI------- 127
           ++Q+   +    T  K       DF+GDK++SY +  G+AA  G T DLK          
Sbjct: 74  VIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVALD 133

Query: 128 --DWLNSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 153
             D ++ FF +G A+A+LLL AF+C AV+SV SSFA++ +
Sbjct: 134 STDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of CmaCh15G003950 vs. TrEMBL
Match: A0A0A0KS88_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515020 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-34
Identity = 84/162 (51.85%), Postives = 116/162 (71.60%), Query Frame = 1


Query: 3   AKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTV-----GDEKLQFHNVNSYRFAMATII 62
           A  G +IAS +LR+LTF+F+ IS++++ T +KTV      + K++F +VNSYR+ +A  +
Sbjct: 2   ASKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAATV 61

Query: 63  IGGAFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANI--- 122
           IGGA  LLQIA  +Y L+TK +G  LF  F D++L+Y LL+ A+A LGS IDL+ANI   
Sbjct: 62  IGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVL 121

Query: 123 ---DWLNSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHKP 154
              D  +SFFD+GNA +A+L LAF+CSA+VSVLSS AL  KP
Sbjct: 122 VDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 163

[Close]

BLAST of CmaCh15G003950 vs. TrEMBL
Match: A0A0A0KU83_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515010 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.0e-33
Identity = 84/154 (54.55%), Postives = 106/154 (68.83%), Query Frame = 1


Query: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60
           ME   G++I S +LR+LTFVFL IS  +L TTS+TV   KL F++ + +R+ +ATIIIG 
Sbjct: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60

Query: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKA--NIDWLN 120
            FNLLQIA +L+ ++   DG +LFDFFGDK LSY L  GAAA  G  +DLK     D   
Sbjct: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120

Query: 121 SFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 153
            FFD+  AA+ LLL AF CSA VS+LSSFALS +
Sbjct: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of CmaCh15G003950 vs. TrEMBL
Match: A0A0A0KNU7_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515030 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-31
Identity = 81/159 (50.94%), Postives = 112/159 (70.44%), Query Frame = 1


Query: 3   AKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTV------GDEKLQFHNVNSYRFAMATI 62
           A  G +IAS +LR LTF+   IS++++ T SKTV      G+ K++F+NV SYR+ +AT 
Sbjct: 2   ASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATA 61

Query: 63  IIGGAFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANI-- 122
           +IGGA +LLQI   +Y LIT  +G  LF  F D++L+Y LL+GA+A LG+ IDL+ NI  
Sbjct: 62  VIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKE 121

Query: 123 ----DWLNSFFDQGNAAAALLLLAFLCSAVVSVLSSFAL 150
                + NSFFD+ NA +A+LLLAF+C+A+VSVLSS AL
Sbjct: 122 LLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLAL 160

[Close]

BLAST of CmaCh15G003950 vs. TrEMBL
Match: G7KXU9_MEDTR (CASP-like protein OS=Medicago truncatula GN=MTR_7g024730 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-27
Identity = 72/159 (45.28%), Postives = 117/159 (73.58%), Query Frame = 1


Query: 7   TKIASFVLRVLTFVFLLISIIVLGTTSKTV----GDEKLQFHNVNSYRFAMATIIIGGAF 66
           ++I   +LRVLTFVFLLI++IV+  T +T+    G+ +++F++++++R+ ++TI+IG A+
Sbjct: 27  SRIVLLLLRVLTFVFLLIALIVIVLTKETLETSFGESEIKFNDIHAFRYMISTIVIGFAY 86

Query: 67  NLLQIALALYRLITKT-----DGGVLFDFFGDKVLSYFLLAGAAAALGSTIDL----KAN 126
           NLLQ+AL+++ +++       DGG +FDFFGDK++SYFLL+G+AA  G++ DL    KA 
Sbjct: 87  NLLQMALSIFTVVSGNRVLSGDGGYMFDFFGDKIISYFLLSGSAAGFGASEDLHRIFKAG 146

Query: 127 IDWLNSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 153
              LNSFF + NA+ +LLLL FL +A+ S+ +SFAL  +
Sbjct: 147 ELPLNSFFGKANASTSLLLLGFLTTAIASIFTSFALPRR 185

[Close]

BLAST of CmaCh15G003950 vs. TrEMBL
Match: A0A0B2R0H5_GLYSO (CASP-like protein OS=Glycine soja GN=glysoja_025514 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-26
Identity = 70/154 (45.45%), Postives = 111/154 (72.08%), Query Frame = 1


Query: 6   GTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDE--KLQFHNVNSYRFAMATIIIGGAFN 65
           G++    +LRVLTFVFLLI++I++    +T  +   +++F+++ +YR+ ++TIIIG A+N
Sbjct: 16  GSRTVLLLLRVLTFVFLLIALILIAIVKQTDDETGVEIKFNDIYAYRYMISTIIIGFAYN 75

Query: 66  LLQIALALYRLITKT-----DGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLN 125
           LLQ+AL+++ +++       DGG LFDFFGDK++SY L++G+AA  G T++L   +   N
Sbjct: 76  LLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELGRGVP-SN 135

Query: 126 SFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 153
           SF D+ NA+A+LLL+AFL +AV S  +SFAL  K
Sbjct: 136 SFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of CmaCh15G003950 vs. TAIR10
Match: AT2G39518.1 (AT2G39518.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 95.5 bits (236), Expect = 3.0e-20
Identity = 60/160 (37.50%), Postives = 94/160 (58.75%), Query Frame = 1


Query: 8   KIASFVLRVLTFVFLLISIIVLGTTSKTVGDE----KLQFHNVNSYRFAMATIIIGGAFN 67
           K+   +LRVLT VFL+I++I+L T S T+  +    K  F +V +YR+ ++  +IG  + 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYA 73

Query: 68  LLQIALALYRLIT--KTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANI------- 127
           ++Q+   +    T  K       DF+GDK++SY +  G+AA  G T DLK          
Sbjct: 74  VIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVALD 133

Query: 128 --DWLNSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 153
             D ++ FF +G A+A+LLL AF+C AV+SV SSFA++ +
Sbjct: 134 STDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of CmaCh15G003950 vs. TAIR10
Match: AT2G39530.1 (AT2G39530.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 91.7 bits (226), Expect = 4.4e-19
Identity = 60/156 (38.46%), Postives = 95/156 (60.90%), Query Frame = 1


Query: 13  VLRVLTFVFLLISIIVLGTTSKTVGDE----KLQFHNVNSYRFAMATIIIGGAFNLLQIA 72
           +LRVLT  FLLI+++++ T + T+       KL F++V +YR+ ++  +IG  + ++Q+ 
Sbjct: 19  LLRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLF 78

Query: 73  LALYRLITKTDGGVL--FDFFGDKVLSYFLLAGAAAALGSTIDLKA---------NIDWL 132
           L + +  T     +   FDF+GDKV+SY L  G+AA  G + DLK          + D +
Sbjct: 79  LTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEFDSTDPV 138

Query: 133 NSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHKP 154
           + FF +G A+A+LLL AF+  AV+SV SS ALS +P
Sbjct: 139 DKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of CmaCh15G003950 vs. NCBI nr
Match: gi|659117979|ref|XP_008458887.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 254.6 bits (649), Expect = 1.1e-64
Identity = 131/153 (85.62%), Postives = 147/153 (96.08%), Query Frame = 1


Query: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60
           MEAKM TKIASFVLRVLTFVFLL+SIIVLGT SKT+G++++ FHNVNSYR+AMATIIIGG
Sbjct: 1   MEAKMATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGNDEVHFHNVNSYRYAMATIIIGG 60

Query: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120
           AFNLLQIALALYRL+TKTDG +LFDF+GDKVLSYFLLAGAAAALGS++DLKAN+D LNSF
Sbjct: 61  AFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANMDMLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKP 154
           FDQGNAAAALLLLAFLCSA++SVLSS ALS+KP
Sbjct: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 153

[Close]

BLAST of CmaCh15G003950 vs. NCBI nr
Match: gi|449450002|ref|XP_004142753.1| (PREDICTED: CASP-like protein 4D1 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 2.7e-34
Identity = 84/162 (51.85%), Postives = 116/162 (71.60%), Query Frame = 1


Query: 3   AKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTV-----GDEKLQFHNVNSYRFAMATII 62
           A  G +IAS +LR+LTF+F+ IS++++ T +KTV      + K++F +VNSYR+ +A  +
Sbjct: 2   ASKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAATV 61

Query: 63  IGGAFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANI--- 122
           IGGA  LLQIA  +Y L+TK +G  LF  F D++L+Y LL+ A+A LGS IDL+ANI   
Sbjct: 62  IGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVL 121

Query: 123 ---DWLNSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHKP 154
              D  +SFFD+GNA +A+L LAF+CSA+VSVLSS AL  KP
Sbjct: 122 VDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 163

[Close]

BLAST of CmaCh15G003950 vs. NCBI nr
Match: gi|659117986|ref|XP_008458890.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 153.3 bits (386), Expect = 3.5e-34
Identity = 84/154 (54.55%), Postives = 108/154 (70.13%), Query Frame = 1


Query: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60
           ME   G+++ S +LR+LTFVFL IS  +L TTS+TV   KL F++ + +R+ +ATIIIG 
Sbjct: 1   MENSSGSRVTSLILRILTFVFLFISFFILITTSQTVRPYKLHFNSYHGFRYMLATIIIGL 60

Query: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKAN--IDWLN 120
            FNLLQIA +L+ ++   DG +LFDFFGDK LSY L  GAAA  G  +DLK     D   
Sbjct: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKKDPDDLFR 120

Query: 121 SFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 153
           +FFD+  AA+ALLL AF CSA VS+LSSFALS +
Sbjct: 121 TFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of CmaCh15G003950 vs. NCBI nr
Match: gi|449450161|ref|XP_004142832.1| (PREDICTED: CASP-like protein 4D1 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 2.9e-33
Identity = 84/154 (54.55%), Postives = 106/154 (68.83%), Query Frame = 1


Query: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60
           ME   G++I S +LR+LTFVFL IS  +L TTS+TV   KL F++ + +R+ +ATIIIG 
Sbjct: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60

Query: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKA--NIDWLN 120
            FNLLQIA +L+ ++   DG +LFDFFGDK LSY L  GAAA  G  +DLK     D   
Sbjct: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120

Query: 121 SFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 153
            FFD+  AA+ LLL AF CSA VS+LSSFALS +
Sbjct: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of CmaCh15G003950 vs. NCBI nr
Match: gi|659117983|ref|XP_008458889.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 146.4 bits (368), Expect = 4.2e-32
Identity = 78/162 (48.15%), Postives = 114/162 (70.37%), Query Frame = 1


Query: 3   AKMGTKIASFVLRVLTFVFLLISIIVLGTTSKT-----VGDEKLQFHNVNSYRFAMATII 62
           A  G +IAS +LR+LTF+F+ IS++++ T SKT     V + K++F NV SYR+ +AT +
Sbjct: 2   ASKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTVSEIKVKFDNVTSYRYLLATAV 61

Query: 63  IGGAFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANI--- 122
           IGGA +LLQI   +Y L+T  +G  LF    D++L+Y LL+GA+A  G+ IDLK NI   
Sbjct: 62  IGGALSLLQIIFNIYHLVTNREGTPLFYIISDQLLAYLLLSGASAGFGAGIDLKVNIKEL 121

Query: 123 ---DWLNSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHKP 154
              ++ +SFF++GNA +A+LLLAF+C+A+VS+LSS AL   P
Sbjct: 122 LESNYYDSFFNEGNAGSAILLLAFICAAIVSLLSSLALIRNP 163

The following BLAST results are available for this feature:

BLAST of CmaCh15G003950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSPLC_SOYBN	1.7e-28	45.45	CASP-like protein 4D1 OS=Glycine max PE=2 SV=1	[more]
CSPLE_RICCO	2.0e-26	43.31	CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1	[more]
CSPLL_POPTR	1.5e-24	43.13	CASP-like protein 4D1 OS=Populus trichocarpa GN=POPTR_0010s21230g PE=2 SV=2	[more]
PIMP1_CAPAN	1.8e-22	44.30	CASP-like protein PIMP1 OS=Capsicum annuum GN=PIMP1 PE=2 SV=1	[more]
CSPLB_ARATH	5.4e-19	37.50	CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1	[more]

BLAST of CmaCh15G003950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS88_CUCSA	1.8e-34	51.85	CASP-like protein OS=Cucumis sativus GN=Csa_5G515020 PE=3 SV=1	[more]
A0A0A0KU83_CUCSA	2.0e-33	54.55	CASP-like protein OS=Cucumis sativus GN=Csa_5G515010 PE=3 SV=1	[more]
A0A0A0KNU7_CUCSA	1.5e-31	50.94	CASP-like protein OS=Cucumis sativus GN=Csa_5G515030 PE=3 SV=1	[more]
G7KXU9_MEDTR	1.3e-27	45.28	CASP-like protein OS=Medicago truncatula GN=MTR_7g024730 PE=3 SV=1	[more]
A0A0B2R0H5_GLYSO	1.9e-26	45.45	CASP-like protein OS=Glycine soja GN=glysoja_025514 PE=3 SV=1	[more]

BLAST of CmaCh15G003950 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39518.1	3.0e-20	37.50	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	4.4e-19	38.46	Uncharacterised protein family (UPF0497)	[more]

BLAST of CmaCh15G003950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117979\|ref\|XP_008458887.1\|	1.1e-64	85.62	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]
gi\|449450002\|ref\|XP_004142753.1\|	2.7e-34	51.85	PREDICTED: CASP-like protein 4D1 [Cucumis sativus]	[more]
gi\|659117986\|ref\|XP_008458890.1\|	3.5e-34	54.55	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]
gi\|449450161\|ref\|XP_004142832.1\|	2.9e-33	54.55	PREDICTED: CASP-like protein 4D1 [Cucumis sativus]	[more]
gi\|659117983\|ref\|XP_008458889.1\|	4.2e-32	48.15	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0002229	defense response to oomycetes
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009409	response to cold
biological_process	GO:0009723	response to ethylene
biological_process	GO:0009753	response to jasmonic acid
biological_process	GO:0009751	response to salicylic acid
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009611	response to wounding
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G003950.1	CmaCh15G003950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 6..137 score: 2.6
None	No IPR available	PANTHER	PTHR33573	FAMILY NOT NAMED	coord: 4..154 score: 5.5
None	No IPR available	PANTHER	PTHR33573:SF5	SUBFAMILY NOT NAMED	coord: 4..154 score: 5.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G003950	Cucsa.010700	Cucumber (Gy14) v1	cgycmaB0542
CmaCh15G003950	Cla004672	Watermelon (97103) v1	cmawmB252
CmaCh15G003950	Csa5G515010	Cucumber (Chinese Long) v2	cmacuB300
CmaCh15G003950	MELO3C021643	Melon (DHL92) v3.5.1	cmameB251
CmaCh15G003950	ClCG09G019900	Watermelon (Charleston Gray)	cmawcgB244
CmaCh15G003950	CSPI05G17620	Wild cucumber (PI 183967)	cmacpiB305
CmaCh15G003950	CmoCh04G027620	Cucurbita moschata (Rifu)	cmacmoB308
CmaCh15G003950	CmoCh15G004060	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G003950	Lsi02G016470	Bottle gourd (USVL1VR-Ls)	cmalsiB272
CmaCh15G003950	Cp4.1LG13g09490	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G003950	Cp4.1LG01g23970	Cucurbita pepo (Zucchini)	cmacpeB317
CmaCh15G003950	MELO3C021643.2	Melon (DHL92) v3.6.1	cmamedB285
CmaCh15G003950	CsaV3_5G026540	Cucumber (Chinese Long) v3	cmacucB0354
CmaCh15G003950	Cla97C09G181310	Watermelon (97103) v2	cmawmbB322
CmaCh15G003950	CsGy5G017250	Cucumber (Gy14) v2	cgybcmaB610
CmaCh15G003950	Carg04503	Silver-seed gourd	carcmaB0961
CmaCh15G003950	Carg02352	Silver-seed gourd	carcmaB0362

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G003950	Watermelon (97103) v2	cmawmbB301
CmaCh15G003950	Cucurbita maxima (Rimu)	cmacmaB319
CmaCh15G003950	Cucurbita maxima (Rimu)	cmacmaB322
CmaCh15G003950	Cucurbita maxima (Rimu)	cmacmaB324
CmaCh15G003950	Cucumber (Gy14) v1	cgycmaB0465
CmaCh15G003950	Cucurbita moschata (Rifu)	cmacmoB306
CmaCh15G003950	Cucurbita moschata (Rifu)	cmacmoB307
CmaCh15G003950	Wild cucumber (PI 183967)	cmacpiB312
CmaCh15G003950	Cucumber (Chinese Long) v2	cmacuB306
CmaCh15G003950	Cucurbita pepo (Zucchini)	cmacpeB303
CmaCh15G003950	Cucurbita pepo (Zucchini)	cmacpeB314
CmaCh15G003950	Bottle gourd (USVL1VR-Ls)	cmalsiB271
CmaCh15G003950	Bottle gourd (USVL1VR-Ls)	cmalsiB284
CmaCh15G003950	Cucumber (Gy14) v2	cgybcmaB492
CmaCh15G003950	Melon (DHL92) v3.6.1	cmamedB302
CmaCh15G003950	Melon (DHL92) v3.6.1	cmamedB325
CmaCh15G003950	Silver-seed gourd	carcmaB0942
CmaCh15G003950	Cucumber (Chinese Long) v3	cmacucB0340