CmoCh15G004060 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G004060
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	CASP-like protein
Location	Cmo_Chr15 : 1851378 .. 1852147 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGGAAACAAAAAGCAAAGGGCATTTTTTGGGCTATAAAAGGTGAACCAGTTAGAGATATTAAATTCATTACCAAGATCAGCAAAAATGGAAGCTAAAATGGGTACCAAAATTGCTTCTTTTGTGCTCAGAGTTCTCACCTTCGTCTTCCTCTTAATTTCCATCATAGTTCTTGGAACCACTTCCAAGACCGTAGGAGATGAGAAGCTTCAATTCCATAATGTCAATTCCTATAGGTATTTATTTATTTATTTATTTTCTATTATTTATTTTTTATTATTATTAAAATTGAAAAAAAAAAAATTCAAAATTTGAAGGTTTGCAATGGCGACGATCATCATTGGAGGAGCATTCAACCTCTTGCAAATAGCCTTAGCCCTTTATCGTCTCATAACCAAATCCGACGGCGGCGTTTTATTCGACTTCTTCGGTGATAAGGTTTTGTCGTACTTTCTGCTGGCGGGAGCGGCGGCGGCGCTGGGTTCTACCATAGACTTGAAGGCCAATATTGACTGGTTGAACTCGTTTTTCGACCAAGGCAACGCCGCTGCGGCTCTTCTTCTTCTTGCTTTCCTATGCAGTGCTATAGTTTCTGTTCTTTCCTCTTTTGCCCTTTCTCACAAACCTACTTAGTTTTGTTTTTTATTTATTGCAAAATTCATAGCACAATCTTTGTCGGACACCCTTTTATCAAATTCTTTCTCGTTTCATGTTCATGGAGTGTATTTTTCTCGGAGACAATTTTTAAATCAAATTTAATTATTTGGATC

mRNA sequence

TGTGGAAACAAAAAGCAAAGGGCATTTTTTGGGCTATAAAAGGTGAACCAGTTAGAGATATTAAATTCATTACCAAGATCAGCAAAAATGGAAGCTAAAATGGGTACCAAAATTGCTTCTTTTGTGCTCAGAGTTCTCACCTTCGTCTTCCTCTTAATTTCCATCATAGTTCTTGGAACCACTTCCAAGACCGTAGGAGATGAGAAGCTTCAATTCCATAATGTCAATTCCTATAGGTTTGCAATGGCGACGATCATCATTGGAGGAGCATTCAACCTCTTGCAAATAGCCTTAGCCCTTTATCGTCTCATAACCAAATCCGACGGCGGCGTTTTATTCGACTTCTTCGGTGATAAGGTTTTGTCGTACTTTCTGCTGGCGGGAGCGGCGGCGGCGCTGGGTTCTACCATAGACTTGAAGGCCAATATTGACTGGTTGAACTCGTTTTTCGACCAAGGCAACGCCGCTGCGGCTCTTCTTCTTCTTGCTTTCCTATGCAGTGCTATAGTTTCTGTTCTTTCCTCTTTTGCCCTTTCTCACAAACCTACTTAGTTTTGTTTTTTATTTATTGCAAAATTCATAGCACAATCTTTGTCGGACACCCTTTTATCAAATTCTTTCTCGTTTCATGTTCATGGAGTGTATTTTTCTCGGAGACAATTTTTAAATCAAATTTAATTATTTGGATC

Coding sequence (CDS)

ATGGAAGCTAAAATGGGTACCAAAATTGCTTCTTTTGTGCTCAGAGTTCTCACCTTCGTCTTCCTCTTAATTTCCATCATAGTTCTTGGAACCACTTCCAAGACCGTAGGAGATGAGAAGCTTCAATTCCATAATGTCAATTCCTATAGGTTTGCAATGGCGACGATCATCATTGGAGGAGCATTCAACCTCTTGCAAATAGCCTTAGCCCTTTATCGTCTCATAACCAAATCCGACGGCGGCGTTTTATTCGACTTCTTCGGTGATAAGGTTTTGTCGTACTTTCTGCTGGCGGGAGCGGCGGCGGCGCTGGGTTCTACCATAGACTTGAAGGCCAATATTGACTGGTTGAACTCGTTTTTCGACCAAGGCAACGCCGCTGCGGCTCTTCTTCTTCTTGCTTTCCTATGCAGTGCTATAGTTTCTGTTCTTTCCTCTTTTGCCCTTTCTCACAAACCTACTTAG

Homology

[Close]

BLAST of CmoCh15G004060 vs. Swiss-Prot
Match: CSPLC_SOYBN (CASP-like protein 4D1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-28
Identity = 69/154 (44.81%), Postives = 111/154 (72.08%), Query Frame = 1


Query: 6   GTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDE--KLQFHNVNSYRFAMATIIIGGAFN 65
           G++    +LRVLTFVFLLI++I++    +T  +   +++F+++ +YR+ ++TIIIG A+N
Sbjct: 16  GSRTVLLLLRVLTFVFLLIALILIAIVKQTDDETGVEIKFNDIYAYRYMISTIIIGFAYN 75

Query: 66  LLQIALALYRLIT-----KSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLN 125
           LLQ+AL+++ +++       DGG LFDFFGDK++SY L++G+AA  G T++L   +   N
Sbjct: 76  LLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELGRGVP-SN 135

Query: 126 SFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK 153
           SF D+ NA+A+LLL+AFL +A+ S  +SFAL  K
Sbjct: 136 SFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of CmoCh15G004060 vs. Swiss-Prot
Match: CSPLE_RICCO (CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-26
Identity = 67/157 (42.68%), Postives = 108/157 (68.79%), Query Frame = 1


Query: 5   MGTKIASFVLRVLTFVFLLISIIVLGTTSKTVG----DEKLQFHNVNSYRFAMATIIIGG 64
           + +++A+ +LR+LTF+FL+ S+++L T + T+     + K+ F +V +YR+ +ATI+IG 
Sbjct: 8   LASRMAALILRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVIGL 67

Query: 65  AFNLLQIALALYRLIT-----KSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLK---A 124
           A+ +LQIA  LY + T       DG + FDFFGDKV+SY L+ GAAA   ST D+K   +
Sbjct: 68  AYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPVFS 127

Query: 125 NIDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFAL 150
                ++F ++G A+A+LLL+ F+C+A++SV SS+AL
Sbjct: 128 GSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of CmoCh15G004060 vs. Swiss-Prot
Match: CSPLL_POPTR (CASP-like protein 4D1 OS=Populus trichocarpa GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 6.5e-25
Identity = 70/160 (43.75%), Postives = 106/160 (66.25%), Query Frame = 1


Query: 5   MGTKIASFVLRVLTFVFLLISIIVLGTTSKTVG---DE-KLQFHNVNSYRFAMATIIIGG 64
           M +++ +  LRVLTF FL++S++++ T + T+    DE K++  +  SYR+ +A I  G 
Sbjct: 17  MVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGIDEFKVRSKDFYSYRYMLAAIAFGL 76

Query: 65  AFNLLQIALALYRLI------TKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANI 124
            + +LQIAL L  +       T  DG ++FDF+GDKV+SY L  GAAAA G+T +LK  +
Sbjct: 77  TYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKELKTQL 136

Query: 125 DWL--NSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK 153
             L  + FF++G A+A+LLLL F+C+AI+SV SS+AL  K
Sbjct: 137 AGLGGDKFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of CmoCh15G004060 vs. Swiss-Prot
Match: PIMP1_CAPAN (CASP-like protein PIMP1 OS=Capsicum annuum GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-22
Identity = 66/149 (44.30%), Postives = 97/149 (65.10%), Query Frame = 1


Query: 11  SFVLRVLTFVFLLISIIVLGTTSKTV----GDEKLQFHNVNSYRFAMATIIIGGAFNLLQ 70
           S ++R+LT + LLIS IV+ T ++TV    GD K++F +  +YR+ +AT+IIG A+ LLQ
Sbjct: 14  SLIVRILTLICLLISFIVIATNNQTVSTVAGDVKIKFKDFYAYRYLIATVIIGMAYTLLQ 73

Query: 71  IALALYRLITKS----DGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLK--ANIDWLNSF 130
           IA ++  L T +    +G +LFDF+GDK +SYFL+ GAAA+ G T DLK     D  + F
Sbjct: 74  IAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMTQDLKQLEGSDNYSKF 133

Query: 131 FDQGNAAAALLLLAFLCSAIVSVLSSFAL 150
            +  NAAA+L L+ F  +   S+ SS+ L
Sbjct: 134 LNTSNAAASLCLIGFFFAVASSIFSSYNL 162

[Close]

BLAST of CmoCh15G004060 vs. Swiss-Prot
Match: CSPLB_ARATH (CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.4e-19
Identity = 59/160 (36.88%), Postives = 95/160 (59.38%), Query Frame = 1


Query: 8   KIASFVLRVLTFVFLLISIIVLGTTSKTVGDE----KLQFHNVNSYRFAMATIIIGGAFN 67
           K+   +LRVLT VFL+I++I+L T S T+  +    K  F +V +YR+ ++  +IG  + 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYA 73

Query: 68  LLQIALALYRLIT--KSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANI------- 127
           ++Q+   +    T  K+      DF+GDK++SY +  G+AA  G T DLK          
Sbjct: 74  VIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVALD 133

Query: 128 --DWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK 153
             D ++ FF +G A+A+LLL AF+C A++SV SSFA++ +
Sbjct: 134 STDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of CmoCh15G004060 vs. TrEMBL
Match: A0A0A0KS88_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515020 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-34
Identity = 85/162 (52.47%), Postives = 117/162 (72.22%), Query Frame = 1


Query: 3   AKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTV-----GDEKLQFHNVNSYRFAMATII 62
           A  G +IAS +LR+LTF+F+ IS++++ T +KTV      + K++F +VNSYR+ +A  +
Sbjct: 2   ASKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAATV 61

Query: 63  IGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANI--- 122
           IGGA  LLQIA  +Y L+TK++G  LF  F D++L+Y LL+ A+A LGS IDL+ANI   
Sbjct: 62  IGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVL 121

Query: 123 ---DWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP 154
              D  +SFFD+GNA +A+L LAF+CSAIVSVLSS AL  KP
Sbjct: 122 VDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 163

[Close]

BLAST of CmoCh15G004060 vs. TrEMBL
Match: A0A0A0KU83_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515010 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.6e-33
Identity = 84/154 (54.55%), Postives = 106/154 (68.83%), Query Frame = 1


Query: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60
           ME   G++I S +LR+LTFVFL IS  +L TTS+TV   KL F++ + +R+ +ATIIIG 
Sbjct: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60

Query: 61  AFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKA--NIDWLN 120
            FNLLQIA +L+ ++   DG +LFDFFGDK LSY L  GAAA  G  +DLK     D   
Sbjct: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120

Query: 121 SFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK 153
            FFD+  AA+ LLL AF CSA VS+LSSFALS +
Sbjct: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of CmoCh15G004060 vs. TrEMBL
Match: A0A0A0KNU7_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515030 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.6e-32
Identity = 82/159 (51.57%), Postives = 112/159 (70.44%), Query Frame = 1


Query: 3   AKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTV------GDEKLQFHNVNSYRFAMATI 62
           A  G +IAS +LR LTF+   IS++++ T SKTV      G+ K++F+NV SYR+ +AT 
Sbjct: 2   ASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATA 61

Query: 63  IIGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANI-- 122
           +IGGA +LLQI   +Y LIT  +G  LF  F D++L+Y LL+GA+A LG+ IDL+ NI  
Sbjct: 62  VIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKE 121

Query: 123 ----DWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFAL 150
                + NSFFD+ NA +A+LLLAF+C+AIVSVLSS AL
Sbjct: 122 LLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLAL 160

[Close]

BLAST of CmoCh15G004060 vs. TrEMBL
Match: G7KXU9_MEDTR (CASP-like protein OS=Medicago truncatula GN=MTR_7g024730 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.8e-28
Identity = 73/159 (45.91%), Postives = 117/159 (73.58%), Query Frame = 1


Query: 7   TKIASFVLRVLTFVFLLISIIVLGTTSKTV----GDEKLQFHNVNSYRFAMATIIIGGAF 66
           ++I   +LRVLTFVFLLI++IV+  T +T+    G+ +++F++++++R+ ++TI+IG A+
Sbjct: 27  SRIVLLLLRVLTFVFLLIALIVIVLTKETLETSFGESEIKFNDIHAFRYMISTIVIGFAY 86

Query: 67  NLLQIALALYRLIT-----KSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDL----KAN 126
           NLLQ+AL+++ +++       DGG +FDFFGDK++SYFLL+G+AA  G++ DL    KA 
Sbjct: 87  NLLQMALSIFTVVSGNRVLSGDGGYMFDFFGDKIISYFLLSGSAAGFGASEDLHRIFKAG 146

Query: 127 IDWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK 153
              LNSFF + NA+ +LLLL FL +AI S+ +SFAL  +
Sbjct: 147 ELPLNSFFGKANASTSLLLLGFLTTAIASIFTSFALPRR 185

[Close]

BLAST of CmoCh15G004060 vs. TrEMBL
Match: A0A0R0L177_SOYBN (CASP-like protein OS=Glycine max GN=GLYMA_02G092500 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-26
Identity = 69/154 (44.81%), Postives = 111/154 (72.08%), Query Frame = 1


Query: 6   GTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDE--KLQFHNVNSYRFAMATIIIGGAFN 65
           G++    +LRVLTFVFLLI++I++    +T  +   +++F+++ +YR+ ++TIIIG A+N
Sbjct: 16  GSRTVLLLLRVLTFVFLLIALILIAIVKQTDDETGVEIKFNDIYAYRYMISTIIIGFAYN 75

Query: 66  LLQIALALYRLIT-----KSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLN 125
           LLQ+AL+++ +++       DGG LFDFFGDK++SY L++G+AA  G T++L   +   N
Sbjct: 76  LLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELGRGVP-SN 135

Query: 126 SFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK 153
           SF D+ NA+A+LLL+AFL +A+ S  +SFAL  K
Sbjct: 136 SFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of CmoCh15G004060 vs. TAIR10
Match: AT2G39518.1 (AT2G39518.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 95.5 bits (236), Expect = 3.0e-20
Identity = 59/160 (36.88%), Postives = 95/160 (59.38%), Query Frame = 1


Query: 8   KIASFVLRVLTFVFLLISIIVLGTTSKTVGDE----KLQFHNVNSYRFAMATIIIGGAFN 67
           K+   +LRVLT VFL+I++I+L T S T+  +    K  F +V +YR+ ++  +IG  + 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYA 73

Query: 68  LLQIALALYRLIT--KSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANI------- 127
           ++Q+   +    T  K+      DF+GDK++SY +  G+AA  G T DLK          
Sbjct: 74  VIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVALD 133

Query: 128 --DWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK 153
             D ++ FF +G A+A+LLL AF+C A++SV SSFA++ +
Sbjct: 134 STDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of CmoCh15G004060 vs. TAIR10
Match: AT2G39530.1 (AT2G39530.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 91.3 bits (225), Expect = 5.7e-19
Identity = 59/156 (37.82%), Postives = 95/156 (60.90%), Query Frame = 1


Query: 13  VLRVLTFVFLLISIIVLGTTSKTVGDE----KLQFHNVNSYRFAMATIIIGGAFNLLQIA 72
           +LRVLT  FLLI+++++ T + T+       KL F++V +YR+ ++  +IG  + ++Q+ 
Sbjct: 19  LLRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLF 78

Query: 73  LALYRLITKSDGGVL--FDFFGDKVLSYFLLAGAAAALGSTIDLKA---------NIDWL 132
           L + +  T     +   FDF+GDKV+SY L  G+AA  G + DLK          + D +
Sbjct: 79  LTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEFDSTDPV 138

Query: 133 NSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP 154
           + FF +G A+A+LLL AF+  A++SV SS ALS +P
Sbjct: 139 DKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of CmoCh15G004060 vs. NCBI nr
Match: gi|659117979|ref|XP_008458887.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 253.4 bits (646), Expect = 2.5e-64
Identity = 131/153 (85.62%), Postives = 147/153 (96.08%), Query Frame = 1


Query: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60
           MEAKM TKIASFVLRVLTFVFLL+SIIVLGT SKT+G++++ FHNVNSYR+AMATIIIGG
Sbjct: 1   MEAKMATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGNDEVHFHNVNSYRYAMATIIIGG 60

Query: 61  AFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120
           AFNLLQIALALYRL+TK+DG +LFDF+GDKVLSYFLLAGAAAALGS++DLKAN+D LNSF
Sbjct: 61  AFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANMDMLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP 154
           FDQGNAAAALLLLAFLCSAI+SVLSS ALS+KP
Sbjct: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 153

[Close]

BLAST of CmoCh15G004060 vs. NCBI nr
Match: gi|449450002|ref|XP_004142753.1| (PREDICTED: CASP-like protein 4D1 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 2.0e-34
Identity = 85/162 (52.47%), Postives = 117/162 (72.22%), Query Frame = 1


Query: 3   AKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTV-----GDEKLQFHNVNSYRFAMATII 62
           A  G +IAS +LR+LTF+F+ IS++++ T +KTV      + K++F +VNSYR+ +A  +
Sbjct: 2   ASKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAATV 61

Query: 63  IGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANI--- 122
           IGGA  LLQIA  +Y L+TK++G  LF  F D++L+Y LL+ A+A LGS IDL+ANI   
Sbjct: 62  IGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVL 121

Query: 123 ---DWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP 154
              D  +SFFD+GNA +A+L LAF+CSAIVSVLSS AL  KP
Sbjct: 122 VDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 163

[Close]

BLAST of CmoCh15G004060 vs. NCBI nr
Match: gi|659117986|ref|XP_008458890.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 153.7 bits (387), Expect = 2.7e-34
Identity = 84/154 (54.55%), Postives = 108/154 (70.13%), Query Frame = 1


Query: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60
           ME   G+++ S +LR+LTFVFL IS  +L TTS+TV   KL F++ + +R+ +ATIIIG 
Sbjct: 1   MENSSGSRVTSLILRILTFVFLFISFFILITTSQTVRPYKLHFNSYHGFRYMLATIIIGL 60

Query: 61  AFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKAN--IDWLN 120
            FNLLQIA +L+ ++   DG +LFDFFGDK LSY L  GAAA  G  +DLK     D   
Sbjct: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKKDPDDLFR 120

Query: 121 SFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK 153
           +FFD+  AA+ALLL AF CSA VS+LSSFALS +
Sbjct: 121 TFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of CmoCh15G004060 vs. NCBI nr
Match: gi|449450161|ref|XP_004142832.1| (PREDICTED: CASP-like protein 4D1 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 2.2e-33
Identity = 84/154 (54.55%), Postives = 106/154 (68.83%), Query Frame = 1


Query: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60
           ME   G++I S +LR+LTFVFL IS  +L TTS+TV   KL F++ + +R+ +ATIIIG 
Sbjct: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60

Query: 61  AFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKA--NIDWLN 120
            FNLLQIA +L+ ++   DG +LFDFFGDK LSY L  GAAA  G  +DLK     D   
Sbjct: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120

Query: 121 SFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHK 153
            FFD+  AA+ LLL AF CSA VS+LSSFALS +
Sbjct: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of CmoCh15G004060 vs. NCBI nr
Match: gi|659117983|ref|XP_008458889.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 146.4 bits (368), Expect = 4.2e-32
Identity = 79/162 (48.77%), Postives = 114/162 (70.37%), Query Frame = 1


Query: 3   AKMGTKIASFVLRVLTFVFLLISIIVLGTTSKT-----VGDEKLQFHNVNSYRFAMATII 62
           A  G +IAS +LR+LTF+F+ IS++++ T SKT     V + K++F NV SYR+ +AT +
Sbjct: 2   ASKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTVSEIKVKFDNVTSYRYLLATAV 61

Query: 63  IGGAFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANI--- 122
           IGGA +LLQI   +Y L+T  +G  LF    D++L+Y LL+GA+A  G+ IDLK NI   
Sbjct: 62  IGGALSLLQIIFNIYHLVTNREGTPLFYIISDQLLAYLLLSGASAGFGAGIDLKVNIKEL 121

Query: 123 ---DWLNSFFDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP 154
              ++ +SFF++GNA +A+LLLAF+C+AIVS+LSS AL   P
Sbjct: 122 LESNYYDSFFNEGNAGSAILLLAFICAAIVSLLSSLALIRNP 163

The following BLAST results are available for this feature:

BLAST of CmoCh15G004060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSPLC_SOYBN	1.3e-28	44.81	CASP-like protein 4D1 OS=Glycine max PE=2 SV=1	[more]
CSPLE_RICCO	1.6e-26	42.68	CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1	[more]
CSPLL_POPTR	6.5e-25	43.75	CASP-like protein 4D1 OS=Populus trichocarpa GN=POPTR_0010s21230g PE=2 SV=2	[more]
PIMP1_CAPAN	1.8e-22	44.30	CASP-like protein PIMP1 OS=Capsicum annuum GN=PIMP1 PE=2 SV=1	[more]
CSPLB_ARATH	5.4e-19	36.88	CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1	[more]

BLAST of CmoCh15G004060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS88_CUCSA	1.4e-34	52.47	CASP-like protein OS=Cucumis sativus GN=Csa_5G515020 PE=3 SV=1	[more]
A0A0A0KU83_CUCSA	1.6e-33	54.55	CASP-like protein OS=Cucumis sativus GN=Csa_5G515010 PE=3 SV=1	[more]
A0A0A0KNU7_CUCSA	6.6e-32	51.57	CASP-like protein OS=Cucumis sativus GN=Csa_5G515030 PE=3 SV=1	[more]
G7KXU9_MEDTR	5.8e-28	45.91	CASP-like protein OS=Medicago truncatula GN=MTR_7g024730 PE=3 SV=1	[more]
A0A0R0L177_SOYBN	1.4e-26	44.81	CASP-like protein OS=Glycine max GN=GLYMA_02G092500 PE=3 SV=1	[more]

BLAST of CmoCh15G004060 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39518.1	3.0e-20	36.88	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	5.7e-19	37.82	Uncharacterised protein family (UPF0497)	[more]

BLAST of CmoCh15G004060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117979\|ref\|XP_008458887.1\|	2.5e-64	85.62	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]
gi\|449450002\|ref\|XP_004142753.1\|	2.0e-34	52.47	PREDICTED: CASP-like protein 4D1 [Cucumis sativus]	[more]
gi\|659117986\|ref\|XP_008458890.1\|	2.7e-34	54.55	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]
gi\|449450161\|ref\|XP_004142832.1\|	2.2e-33	54.55	PREDICTED: CASP-like protein 4D1 [Cucumis sativus]	[more]
gi\|659117983\|ref\|XP_008458889.1\|	4.2e-32	48.77	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0002229	defense response to oomycetes
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009409	response to cold
biological_process	GO:0009723	response to ethylene
biological_process	GO:0009753	response to jasmonic acid
biological_process	GO:0009751	response to salicylic acid
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009611	response to wounding
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G004060.1	CmoCh15G004060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 6..137 score: 2.4
None	No IPR available	PANTHER	PTHR33573	FAMILY NOT NAMED	coord: 4..154 score: 1.4
None	No IPR available	PANTHER	PTHR33573:SF5	SUBFAMILY NOT NAMED	coord: 4..154 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G004060	Cucsa.010700	Cucumber (Gy14) v1	cgycmoB0543
CmoCh15G004060	CmaCh15G003950	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G004060	CmaCh04G026400	Cucurbita maxima (Rimu)	cmacmoB692
CmoCh15G004060	Cla004672	Watermelon (97103) v1	cmowmB243
CmoCh15G004060	Csa5G515010	Cucumber (Chinese Long) v2	cmocuB288
CmoCh15G004060	MELO3C021643	Melon (DHL92) v3.5.1	cmomeB239
CmoCh15G004060	ClCG09G019900	Watermelon (Charleston Gray)	cmowcgB233
CmoCh15G004060	CSPI05G17620	Wild cucumber (PI 183967)	cmocpiB297
CmoCh15G004060	Lsi02G016470	Bottle gourd (USVL1VR-Ls)	cmolsiB261
CmoCh15G004060	Cp4.1LG13g09490	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G004060	Cp4.1LG01g23970	Cucurbita pepo (Zucchini)	cmocpeB279
CmoCh15G004060	MELO3C021643.2	Melon (DHL92) v3.6.1	cmomedB271
CmoCh15G004060	CsaV3_5G026540	Cucumber (Chinese Long) v3	cmocucB0349
CmoCh15G004060	Cla97C09G181310	Watermelon (97103) v2	cmowmbB305
CmoCh15G004060	CsGy5G017250	Cucumber (Gy14) v2	cgybcmoB585
CmoCh15G004060	Carg04503	Silver-seed gourd	carcmoB0936
CmoCh15G004060	Carg02352	Silver-seed gourd	carcmoB0362

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G004060	Cucurbita moschata (Rifu)	cmocmoB252
CmoCh15G004060	Cucurbita moschata (Rifu)	cmocmoB258
CmoCh15G004060	Cucurbita moschata (Rifu)	cmocmoB259
CmoCh15G004060	Cucurbita moschata (Rifu)	cmocmoB261
CmoCh15G004060	Cucumber (Gy14) v1	cgycmoB0466
CmoCh15G004060	Cucurbita maxima (Rimu)	cmacmoB689
CmoCh15G004060	Wild cucumber (PI 183967)	cmocpiB304
CmoCh15G004060	Cucumber (Chinese Long) v2	cmocuB295
CmoCh15G004060	Cucurbita pepo (Zucchini)	cmocpeB266
CmoCh15G004060	Cucurbita pepo (Zucchini)	cmocpeB277
CmoCh15G004060	Bottle gourd (USVL1VR-Ls)	cmolsiB260
CmoCh15G004060	Bottle gourd (USVL1VR-Ls)	cmolsiB273
CmoCh15G004060	Cucumber (Gy14) v2	cgybcmoB462
CmoCh15G004060	Melon (DHL92) v3.6.1	cmomedB289
CmoCh15G004060	Melon (DHL92) v3.6.1	cmomedB310
CmoCh15G004060	Silver-seed gourd	carcmoB0916
CmoCh15G004060	Cucumber (Chinese Long) v3	cmocucB0335
CmoCh15G004060	Watermelon (97103) v2	cmowmbB284