Cp4.1LG01g23970 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g23970
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	CASP-like protein
Location	Cp4.1LG01 : 19386612 .. 19388611 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTTGATAGCAGCGGCTGTAATTGGAGGTGTTTTGAGTTTGATTCAAATCATTCTCAGCATTTACCATATGGTTACCAAAAGCGAAGGAACTCCGCTCTTTTATTTGTTCAGCGATTACGTAAGTGCATGCAAAAAAGTGTTTTTAAGAACTTGAAAAGTTTGTTTTCGATGAATCTTACACGATGTTATTGTATGTAGTTGTTGTCGTATCTGTTGTTATCGAGCTCGTCGGCAGCGTTAGGAGCTGGGATCGATATGAGAGCTAATTTGAAGGAGCTGTTTGGAACGCTTTTCGACTCGTTTTTCGACCAGGGGAGTGGTGCAGCTGCTGTTCTTTTTATTGCATTCGTTTGCGCTGCTGTTGTCTCAATTCTCTCTGCATTGGCCCTCATCAGGAAGCCTTGAATCAGTGATGGTTTCTTTGTCTGATAAATTATGATCATTTTTATTTACCTTTTGTATGTGTGTATCCTTTTCCATTTTTAATTTGTAATATGTGATTTAGATTAATGAATATCTAATTTGATCGAATTAATTCTGTCTCAATCACCCGATATTCAACATAATTTTGTTTTCAACCATCATACATCATCGATGTTTAATATATTTTTCAAAAGAATATTTCATGTCGATTGGAAAGAGGAACGCGTGCTTGCGAGAATGCTGAGTTTGGAAGGGGATGAATTGTGAGATCTGACGTTTGTTGGAGAGAGAAGCTAACCATTTTTATGTGTAGAAACCTCTCCTGGTCAACAAAGTTTTAAAAATTTCGAGGGAAAGAAAGTTCGAACAAACAATATCTATTAACAGTGGACTTGAGCGGTTATTGAAAGAAGCTTATGAATTTGAAATAGCCTACTTCTTTCAATAACTAACTTAGTCCAAAATATAACTTTGGGTGCACGATGATTCGAAAAAATTATATTCAATTATTAAAAAGATGACTAATGCAAATATTCTAAGATATTTAAAGAAAACATCGCGAATTTTATAATGACAGAATTAAATAATGTATAGAGTAAGACAGATGAAGAGAATTTCACCTTATTTTCCAATTTTATGAACTAAGATTAATGATTAAATATTGAATTCTAATGACATAGTCCATAATTTAAATACTTTATTAAAAAAAAAATGGATTCTCAATCCATTTGGAAATATTATAGAATATAAGTTATAGATAATTTCCATTATTTATTTATTTTTTGAAAATCTTGAGATGAACATAATAAATAAAAAATTGGCCAAGAAAATACCAAGTCCAGCTTTTATATATATATATATATATATAAAAGTATATGTGTGTGTATATAGTAAAAGTTGAAGAGCAAAATTTAGAAGGGTGGAAGGAGGAGATGGAAGGGTCAAAGGGCTCAAGAATTGCTTCACTGATTCTAAGAATTCTGACCTTCATTTTGATCTTCATTTCTCTCATAATCAACGCCACCAATTCCAAAACTTTCAACAAAGGCGCTCAAAATGAAACAAAATTTAAGTTCAAAGATGTTTATTCTTATCGGTAAGTGTGTTCTTAAATATGTTTTTTCTTTTAGAATTCTCAGCTATTTTTTATTCAATCTGATTCGGTTTATGTATAGATATTTGATATCAACCATGATTATTGGAGCTGTTTTGAGTCTACTTCAAATCGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTCCTCTTCGATATGTTCAGTGACAAGGTGAGTATAGTAATATTTGTTTAAGCTTTTGAGATTTAAGGGTGTTTGATGTTATGTTATGTCGTGTCATGTAGCTGTTGTCGTATCTTCTACTGTCGGGGGCCTCGGCGGGGTTAGGCGCTGGCATCGATTTGAGAGTCGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTCGACAAGGGAAATGCTTCGGCGGCTGTTCTTCTCCTTGCGTTTATTTGCGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCT

mRNA sequence

TTATTTGATAGCAGCGGCTGTAATTGGAGGTGTTTTGAGTTTGATTCAAATCATTCTCAGCATTTACCATATGGTTACCAAAAGCGAAGGAACTCCGCTCTTTTATTTGTTCAGCGATTACTTGTTGTCGTATCTGTTGTTATCGAGCTCGTCGGCAGCGTTAGGAGCTGGGATCGATATGAGAGCTAATTTGAAGGAGCTGTTTGGAACGCTTTTCGACTCGTTTTTCGACCAGGGGAGTGGTGCAGCTGCTGTTCTTTTTATTGCATTCGTTTGCGCTGCTGTTGGCTCAAGAATTGCTTCACTGATTCTAAGAATTCTGACCTTCATTTTGATCTTCATTTCTCTCATAATCAACGCCACCAATTCCAAAACTTTCAACAAAGGCGCTCAAAATGAAACAAAATTTAAGTTCAAAGATGTTTATTCTTATCGATATTTGATATCAACCATGATTATTGGAGCTGTTTTGAGTCTACTTCAAATCGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTCCTCTTCGATATGTTCAGTGACAAGCTGTTGTCGTATCTTCTACTGTCGGGGGCCTCGGCGGGGTTAGGCGCTGGCATCGATTTGAGAGTCGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTCGACAAGGGAAATGCTTCGGCGGCTGTTCTTCTCCTTGCGTTTATTTGCGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCT

Coding sequence (CDS)

ATGGTTACCAAAAGCGAAGGAACTCCGCTCTTTTATTTGTTCAGCGATTACTTGTTGTCGTATCTGTTGTTATCGAGCTCGTCGGCAGCGTTAGGAGCTGGGATCGATATGAGAGCTAATTTGAAGGAGCTGTTTGGAACGCTTTTCGACTCGTTTTTCGACCAGGGGAGTGGTGCAGCTGCTGTTCTTTTTATTGCATTCGTTTGCGCTGCTGTTGGCTCAAGAATTGCTTCACTGATTCTAAGAATTCTGACCTTCATTTTGATCTTCATTTCTCTCATAATCAACGCCACCAATTCCAAAACTTTCAACAAAGGCGCTCAAAATGAAACAAAATTTAAGTTCAAAGATGTTTATTCTTATCGATATTTGATATCAACCATGATTATTGGAGCTGTTTTGAGTCTACTTCAAATCGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTCCTCTTCGATATGTTCAGTGACAAGCTGTTGTCGTATCTTCTACTGTCGGGGGCCTCGGCGGGGTTAGGCGCTGGCATCGATTTGAGAGTCGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTCGACAAGGGAAATGCTTCGGCGGCTGTTCTTCTCCTTGCGTTTATTTGCGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCT

Protein sequence

MVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLKELFGTLFDSFFDQGSGAAAVLFIAFVCAAVGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP

Homology

[Close]

BLAST of Cp4.1LG01g23970 vs. Swiss-Prot
Match: CSPLC_SOYBN (CASP-like protein 4D1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.7e-24
Identity = 74/166 (44.58%), Postives = 110/166 (66.27%), Query Frame = 1


Query: 70  AAVGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMI 129
           ++ GSR   L+LR+LTF+ + I+LI+ A   +T +   +   + KF D+Y+YRY+IST+I
Sbjct: 13  SSTGSRTVLLLLRVLTFVFLLIALILIAIVKQTDD---ETGVEIKFNDIYAYRYMISTII 72

Query: 130 IGAVLSLLQIALNIYNVVTKSHRTL------LFDMFSDKLLSYLLLSGASAGLGAGIDLR 189
           IG   +LLQ+AL+I+ VV+  +R L      LFD F DK++SYLL+SG++AG G  ++L 
Sbjct: 73  IGFAYNLLQMALSIFTVVS-GNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELG 132

Query: 190 VGLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 230
            G+        NSF DK NASA++LL+AF+  AV S  +S AL +K
Sbjct: 133 RGVPS------NSFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of Cp4.1LG01g23970 vs. Swiss-Prot
Match: CSPLE_RICCO (CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.1e-23
Identity = 69/161 (42.86%), Postives = 104/161 (64.60%), Query Frame = 1


Query: 71  AVGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMII 130
           ++ SR+A+LILRILTFI +  SL+I  TN+ T       E K  FKDVY+YRY+++T++I
Sbjct: 7   SLASRMAALILRILTFIFLIASLVILTTNTATLELDLV-EVKVHFKDVYAYRYMLATIVI 66

Query: 131 GAVLSLLQIALNIYNVVTKSHR-----TLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVG 190
           G   ++LQIA  +Y V T +        L FD F DK++SY+L++GA+AG  +  D++  
Sbjct: 67  GLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPV 126

Query: 191 LKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLAL 227
                    ++F +KG ASA++LL+ F+C AV+S+ SS AL
Sbjct: 127 FSG--SGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of Cp4.1LG01g23970 vs. Swiss-Prot
Match: CSPLL_POPTR (CASP-like protein 4D1 OS=Populus trichocarpa GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 2.0e-22
Identity = 67/162 (41.36%), Postives = 103/162 (63.58%), Query Frame = 1


Query: 74  SRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMIIGAV 133
           SR+ +L LR+LTF  + +SL+I  TN+ T   G  +E K + KD YSYRY+++ +  G  
Sbjct: 19  SRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGI-DEFKVRSKDFYSYRYMLAAIAFGLT 78

Query: 134 LSLLQIALNIYNVV------TKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 193
            ++LQIAL + ++       T     L+FD + DK++SY+L +GA+A  GA  +L+  L 
Sbjct: 79  YTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKELKTQLA 138

Query: 194 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 230
            L G+    FF+KG ASA++LLL F+C A++S+ SS AL +K
Sbjct: 139 GLGGD---KFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of Cp4.1LG01g23970 vs. Swiss-Prot
Match: CSPLB_ARATH (CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-20
Identity = 67/165 (40.61%), Postives = 102/165 (61.82%), Query Frame = 1


Query: 71  AVGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMII 130
           AV  ++  L+LR+LT + + I+LII +TNS T      +  KF FKDVY+YRY++S  +I
Sbjct: 10  AVSLKVLLLLLRVLTGVFLVIALIILSTNSVTIVSQG-SALKFHFKDVYAYRYMLSAAVI 69

Query: 131 GAVLSLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKE 190
           G V +++Q+   I    T  K+      D + DKL+SYL+ +G++AG G   DL+     
Sbjct: 70  GLVYAVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLA 129

Query: 191 LVG----NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 230
           LV     + ++ FF KG ASA++LL AFIC AV+S+ SS A+ ++
Sbjct: 130 LVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of Cp4.1LG01g23970 vs. Swiss-Prot
Match: CSPLL_ARALL (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.5e-20
Identity = 64/164 (39.02%), Postives = 103/164 (62.80%), Query Frame = 1


Query: 72  VGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMIIG 131
           V  +++ L+LR+LT + + I+LII +TNS T      +  KF FKDVY+YRY++S  +IG
Sbjct: 11  VSLKVSLLLLRVLTGVFLVIALIILSTNSVTIVSQG-SALKFHFKDVYAYRYMLSAAVIG 70

Query: 132 AVLSLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKEL 191
            + +++Q+   I    T  K+      D + DKL+SYL+ +G++AG G   DL+     L
Sbjct: 71  LLYAVIQLFFTISEFATGMKNPFNYQLDFYGDKLISYLVATGSAAGFGVSKDLKDAFIAL 130

Query: 192 VG----NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 230
           V     + ++ FF +G ASA++LL +FIC AV+S+ SSLA+ ++
Sbjct: 131 VALDSTDPVDKFFSRGYASASLLLFSFICLAVLSVFSSLAIAKR 173

[Close]

BLAST of Cp4.1LG01g23970 vs. TrEMBL
Match: A0A0A0KS88_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515020 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.3e-43
Identity = 107/162 (66.05%), Postives = 130/162 (80.25%), Query Frame = 1


Query: 70  AAVGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMI 129
           A+ G RIAS+ILRILTFI IFISL+I ATN+KT  K   NE K KF DV SYRY+++  +
Sbjct: 2   ASKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAATV 61

Query: 130 IGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKEL 189
           IG  L LLQIA NIY++VTK+  T LF MFSD+LL+YLLLS ASAGLG+GIDLR  +K L
Sbjct: 62  IGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVL 121

Query: 190 V-GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 231
           V G+  +SFFDKGNA +A+L LAFIC+A+VS+LSSLALI+KP
Sbjct: 122 VDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 163

[Close]

BLAST of Cp4.1LG01g23970 vs. TrEMBL
Match: A0A0A0KNU7_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515030 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.2e-43
Identity = 109/161 (67.70%), Postives = 127/161 (78.88%), Query Frame = 1


Query: 70  AAVGSRIASLILRILTFILIFISLIINATNSKT-FNKGAQNETKFKFKDVYSYRYLISTM 129
           A+ G RIASLILR LTFIL FISL+I ATNSKT    G   E K KF +V SYRYL++T 
Sbjct: 2   ASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATA 61

Query: 130 IIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKE 189
           +IG  LSLLQI  NIY+++T    T LF MFSD+LL+YLLLSGASAGLGAGIDLRV +KE
Sbjct: 62  VIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKE 121

Query: 190 LV-GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIR 229
           L+ G   NSFFDK NA +A+LLLAF+CAA+VS+LSSLALIR
Sbjct: 122 LLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162

[Close]

BLAST of Cp4.1LG01g23970 vs. TrEMBL
Match: A0A0A0KU83_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515010 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.3e-27
Identity = 78/157 (49.68%), Postives = 104/157 (66.24%), Query Frame = 1


Query: 73  GSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMIIGA 132
           GSRI SLILRILTF+ +FIS  I  T S+T         K  F D + +RY+++T+IIG 
Sbjct: 6   GSRITSLILRILTFVFLFISFFILITTSQTVRP-----YKLHFNDYHGFRYMLATIIIGL 65

Query: 133 VLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVGN 192
           V +LLQIA +++N+V     T+LFD F DK LSYLL +GA+AG G G+DL+   K    +
Sbjct: 66  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK---KVDPDD 125

Query: 193 LLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 230
           L   FFDK  A++ +LL AF C+A VSILSS AL ++
Sbjct: 126 LFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of Cp4.1LG01g23970 vs. TrEMBL
Match: W9SGV0_9ROSA (CASP-like protein OS=Morus notabilis GN=L484_009956 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.8e-24
Identity = 72/158 (45.57%), Postives = 107/158 (67.72%), Query Frame = 1


Query: 74  SRIASLILRILTFILIFISLIINATNSKTFNKGAQ--NETKFKFKDVYSYRYLISTMIIG 133
           S I +L+LR+  F+L+ ISLI+  TN+ T  KG     E  F+F+DV +YRY++S+++IG
Sbjct: 7   SCIVNLVLRVFVFVLLLISLILICTNTTTA-KGTDVFAEQDFRFQDVIAYRYMLSSIVIG 66

Query: 134 AVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVG 193
               LLQ+A  IYNV+ KS   LLFD + DK++SY+L +GA++G G   D+++   +L  
Sbjct: 67  TAFVLLQLAFTIYNVIAKSEGNLLFDFYGDKIMSYVLATGAASGFGVTNDMQMLFNKLNI 126

Query: 194 NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 230
            L + F+ K  ASA++LLLA +C AV+S+ SS ALI K
Sbjct: 127 FLGDDFYAKSYASASLLLLATVCTAVLSVFSSYALIPK 163

[Close]

BLAST of Cp4.1LG01g23970 vs. TrEMBL
Match: M5XNH4_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa020447mg PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.7e-23
Identity = 76/158 (48.10%), Postives = 105/158 (66.46%), Query Frame = 1


Query: 75  RIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMIIGAVL 134
           R+ASLILRI TF+L+ ISLI+  TN  T +   Q   K +F+D+Y+YRY++ST++IG   
Sbjct: 30  RLASLILRIFTFLLLLISLIVLCTN--TVDVYLQ---KLRFQDIYAYRYMLSTIVIGTAY 89

Query: 135 SLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLR--VGLKELVGN 194
           SLLQ+AL+I+NVV+     LL D F DKL+SYLL SG  AG    +D +       L   
Sbjct: 90  SLLQLALSIHNVVSGQDGILLLDFFGDKLISYLLASGTGAGFAITVDTKRLTDADPLFDM 149

Query: 195 L-LNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 230
           + +  F+DK  ASA++LLLAF C A++SI+SS  L +K
Sbjct: 150 IDIREFYDKAYASASLLLLAFCCTAMLSIISSYTLPKK 182

[Close]

BLAST of Cp4.1LG01g23970 vs. TAIR10
Match: AT2G39518.1 (AT2G39518.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-21
Identity = 67/165 (40.61%), Postives = 102/165 (61.82%), Query Frame = 1


Query: 71  AVGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMII 130
           AV  ++  L+LR+LT + + I+LII +TNS T      +  KF FKDVY+YRY++S  +I
Sbjct: 10  AVSLKVLLLLLRVLTGVFLVIALIILSTNSVTIVSQG-SALKFHFKDVYAYRYMLSAAVI 69

Query: 131 GAVLSLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKE 190
           G V +++Q+   I    T  K+      D + DKL+SYL+ +G++AG G   DL+     
Sbjct: 70  GLVYAVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLA 129

Query: 191 LVG----NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 230
           LV     + ++ FF KG ASA++LL AFIC AV+S+ SS A+ ++
Sbjct: 130 LVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of Cp4.1LG01g23970 vs. TAIR10
Match: AT2G39530.1 (AT2G39530.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 96.3 bits (238), Expect = 2.6e-20
Identity = 65/166 (39.16%), Postives = 104/166 (62.65%), Query Frame = 1


Query: 71  AVGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMII 130
           +V  R   L+LR+LT   + I++++ +TN+ T    + +  K  F DVY+YRY++S  +I
Sbjct: 10  SVTLRTVLLLLRVLTAAFLLITVVLISTNTVTLEISSTS-IKLPFNDVYAYRYMLSAAVI 69

Query: 131 GAVLSLLQIALNIYNVVT-KSHR-TLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKE 190
           G V +++Q+ L I    T K+H  T  FD + DK++SYLL +G++AG G   DL+     
Sbjct: 70  GLVYAVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIA 129

Query: 191 LVG----NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 231
           L+     + ++ FF KG ASA++LL AF+  AV+S+ SSLAL ++P
Sbjct: 130 LIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of Cp4.1LG01g23970 vs. NCBI nr
Match: gi|449450002|ref|XP_004142753.1| (PREDICTED: CASP-like protein 4D1 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 4.7e-43
Identity = 107/162 (66.05%), Postives = 130/162 (80.25%), Query Frame = 1


Query: 70  AAVGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMI 129
           A+ G RIAS+ILRILTFI IFISL+I ATN+KT  K   NE K KF DV SYRY+++  +
Sbjct: 2   ASKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAATV 61

Query: 130 IGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKEL 189
           IG  L LLQIA NIY++VTK+  T LF MFSD+LL+YLLLS ASAGLG+GIDLR  +K L
Sbjct: 62  IGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVL 121

Query: 190 V-GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 231
           V G+  +SFFDKGNA +A+L LAFIC+A+VS+LSSLALI+KP
Sbjct: 122 VDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 163

[Close]

BLAST of Cp4.1LG01g23970 vs. NCBI nr
Match: gi|659117983|ref|XP_008458889.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 183.3 bits (464), Expect = 4.7e-43
Identity = 108/162 (66.67%), Postives = 130/162 (80.25%), Query Frame = 1


Query: 70  AAVGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMI 129
           A+ G RIASLILRILTFI IFISL+I ATNSKT  KG  +E K KF +V SYRYL++T +
Sbjct: 2   ASKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTVSEIKVKFDNVTSYRYLLATAV 61

Query: 130 IGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKEL 189
           IG  LSLLQI  NIY++VT    T LF + SD+LL+YLLLSGASAG GAGIDL+V +KEL
Sbjct: 62  IGGALSLLQIIFNIYHLVTNREGTPLFYIISDQLLAYLLLSGASAGFGAGIDLKVNIKEL 121

Query: 190 V-GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 231
           +  N  +SFF++GNA +A+LLLAFICAA+VS+LSSLALIR P
Sbjct: 122 LESNYYDSFFNEGNAGSAILLLAFICAAIVSLLSSLALIRNP 163

[Close]

BLAST of Cp4.1LG01g23970 vs. NCBI nr
Match: gi|700196121|gb|KGN51298.1| (hypothetical protein Csa_5G515030 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42
Identity = 109/161 (67.70%), Postives = 127/161 (78.88%), Query Frame = 1


Query: 70  AAVGSRIASLILRILTFILIFISLIINATNSKT-FNKGAQNETKFKFKDVYSYRYLISTM 129
           A+ G RIASLILR LTFIL FISL+I ATNSKT    G   E K KF +V SYRYL++T 
Sbjct: 2   ASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATA 61

Query: 130 IIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKE 189
           +IG  LSLLQI  NIY+++T    T LF MFSD+LL+YLLLSGASAGLGAGIDLRV +KE
Sbjct: 62  VIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKE 121

Query: 190 LV-GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIR 229
           L+ G   NSFFDK NA +A+LLLAF+CAA+VS+LSSLALIR
Sbjct: 122 LLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162

[Close]

BLAST of Cp4.1LG01g23970 vs. NCBI nr
Match: gi|659117979|ref|XP_008458887.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 1.1e-31
Identity = 80/161 (49.69%), Postives = 119/161 (73.91%), Query Frame = 1


Query: 70  AAVGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMI 129
           A + ++IAS +LR+LTF+ + +S+I+  TNSKT         +  F +V SYRY ++T+I
Sbjct: 3   AKMATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGND-----EVHFHNVNSYRYAMATII 62

Query: 130 IGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKEL 189
           IG   +LLQIAL +Y +VTK+  ++LFD + DK+LSY LL+GA+A LG+ +DL+  +   
Sbjct: 63  IGGAFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANM--- 122

Query: 190 VGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 231
             ++LNSFFD+GNA+AA+LLLAF+C+A++S+LSSLAL  KP
Sbjct: 123 --DMLNSFFDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 153

[Close]

BLAST of Cp4.1LG01g23970 vs. NCBI nr
Match: gi|659117986|ref|XP_008458890.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 4.7e-27
Identity = 77/157 (49.04%), Postives = 106/157 (67.52%), Query Frame = 1


Query: 73  GSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMIIGA 132
           GSR+ SLILRILTF+ +FIS  I  T S+T         K  F   + +RY+++T+IIG 
Sbjct: 6   GSRVTSLILRILTFVFLFISFFILITTSQTVRP-----YKLHFNSYHGFRYMLATIIIGL 65

Query: 133 VLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVGN 192
           V +LLQIA +++N+V     T+LFD F DK LSYLL +GA+AG G G+DL+   K+   +
Sbjct: 66  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK---KKDPDD 125

Query: 193 LLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 230
           L  +FFDK  A++A+LL AF C+A VSILSS AL ++
Sbjct: 126 LFRTFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 154

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g23970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSPLC_SOYBN	1.7e-24	44.58	CASP-like protein 4D1 OS=Glycine max PE=2 SV=1	[more]
CSPLE_RICCO	3.1e-23	42.86	CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1	[more]
CSPLL_POPTR	2.0e-22	41.36	CASP-like protein 4D1 OS=Populus trichocarpa GN=POPTR_0010s21230g PE=2 SV=2	[more]
CSPLB_ARATH	1.9e-20	40.61	CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1	[more]
CSPLL_ARALL	5.5e-20	39.02	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903204 P...	[more]

BLAST of Cp4.1LG01g23970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS88_CUCSA	3.3e-43	66.05	CASP-like protein OS=Cucumis sativus GN=Csa_5G515020 PE=3 SV=1	[more]
A0A0A0KNU7_CUCSA	7.2e-43	67.70	CASP-like protein OS=Cucumis sativus GN=Csa_5G515030 PE=3 SV=1	[more]
A0A0A0KU83_CUCSA	7.3e-27	49.68	CASP-like protein OS=Cucumis sativus GN=Csa_5G515010 PE=3 SV=1	[more]
W9SGV0_9ROSA	5.8e-24	45.57	CASP-like protein OS=Morus notabilis GN=L484_009956 PE=3 SV=1	[more]
M5XNH4_PRUPE	3.7e-23	48.10	CASP-like protein OS=Prunus persica GN=PRUPE_ppa020447mg PE=3 SV=1	[more]

BLAST of Cp4.1LG01g23970 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39518.1	1.1e-21	40.61	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	2.6e-20	39.16	Uncharacterised protein family (UPF0497)	[more]

BLAST of Cp4.1LG01g23970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450002\|ref\|XP_004142753.1\|	4.7e-43	66.05	PREDICTED: CASP-like protein 4D1 [Cucumis sativus]	[more]
gi\|659117983\|ref\|XP_008458889.1\|	4.7e-43	66.67	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]
gi\|700196121\|gb\|KGN51298.1\|	1.0e-42	67.70	hypothetical protein Csa_5G515030 [Cucumis sativus]	[more]
gi\|659117979\|ref\|XP_008458887.1\|	1.1e-31	49.69	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]
gi\|659117986\|ref\|XP_008458890.1\|	4.7e-27	49.04	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0002229	defense response to oomycetes
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009409	response to cold
biological_process	GO:0009723	response to ethylene
biological_process	GO:0009753	response to jasmonic acid
biological_process	GO:0009751	response to salicylic acid
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009611	response to wounding
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g23970.1	Cp4.1LG01g23970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 74..214 score: 1.5E-23coord: 5..69 score: 2.
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 74..229 score: 8.2
None	No IPR available	PANTHER	PTHR11615:SF148	SUBFAMILY NOT NAMED	coord: 74..229 score: 8.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g23970	Cucsa.010700	Cucumber (Gy14) v1	cgycpeB0522
Cp4.1LG01g23970	CmaCh15G003950	Cucurbita maxima (Rimu)	cmacpeB317
Cp4.1LG01g23970	CmaCh04G026400	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g23970	CmoCh15G004060	Cucurbita moschata (Rifu)	cmocpeB279
Cp4.1LG01g23970	CmoCh04G027620	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g23970	Cla004673	Watermelon (97103) v1	cpewmB381
Cp4.1LG01g23970	Csa5G515010	Cucumber (Chinese Long) v2	cpecuB417
Cp4.1LG01g23970	MELO3C021643	Melon (DHL92) v3.5.1	cpemeB358
Cp4.1LG01g23970	ClCG09G019900	Watermelon (Charleston Gray)	cpewcgB344
Cp4.1LG01g23970	CSPI05G17620	Wild cucumber (PI 183967)	cpecpiB416
Cp4.1LG01g23970	MELO3C021643.2	Melon (DHL92) v3.6.1	cpemedB418
Cp4.1LG01g23970	CsaV3_5G026540	Cucumber (Chinese Long) v3	cpecucB0519
Cp4.1LG01g23970	CsGy5G017250	Cucumber (Gy14) v2	cgybcpeB627
Cp4.1LG01g23970	Carg02352	Silver-seed gourd	carcpeB0374
Cp4.1LG01g23970	Carg04503	Silver-seed gourd	carcpeB0965

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g23970	Cp4.1LG13g09490	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g23970	Bottle gourd (USVL1VR-Ls)	cpelsiB324
Cp4.1LG01g23970	Bottle gourd (USVL1VR-Ls)	cpelsiB336
Cp4.1LG01g23970	Cucumber (Chinese Long) v3	cpecucB0502
Cp4.1LG01g23970	Wax gourd	cpewgoB0541
Cp4.1LG01g23970	Cucurbita pepo (Zucchini)	cpecpeB384