Cla004673 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla004673
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	CASP-like protein RCOM_1206790 (AHRD V1 -**- CSPLE_RICCO); contains Interpro domain(s) IPR006459 Uncharacterised protein family UPF0497, trans-membrane plant subgroup
Location	Chr9 : 31972588 .. 31974193 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCTCAAAGGGTTCAAGAATTGCTTCTCTTATATTGAGAGTTTTGACCTTCATTTTGATCTTTATTTCTCTCTTAATCATCGCCACCAATTCCAAAACTATTCTTCAAGGGACCGTAAGTGAAACAAAAGTTGAGTTCAAAGATGTTTATTCTTATCGGTAACTCTCTCTCTCTTTTTCTTTTTTAAATAATATTTTGGTGATTTTTGAGATAATTATGTAAATATATTCATTGTTTCTAATTTTTAAGTTGATTTAAATGGTCAGTTATTTGCTAGCAGCGGCTGTTATTGGGGCTGCTTTGAGTCTTCTTCAAATTGCTCTCGCCATTTACTCTCTTGTTACCAAAGGCGAGGGAACTCCACTTTTCGATTTGTTCAGCGATAAGGTCACACCTTTTTTCTTTCTTTTTTTTATTCAACTTTACTTTCCATAAATTTTAAAAAAGAAAATAATAATAATAATAATCTTTCCATTAATTTAATTTAGTTTTGATTAAGTAACTACTTGGATTTTAACGTTTGGGATATGAAGAAAAACAAATATCCCATAGAAGATATCGAAATGAAACAAAAGGAAAACAGAGATTAATTAGGTGTCGTGAACCTTAAGATAAGGGTTTTATTGTTAATTTCTTTCGAAATATTTATATTCCATTAAGAAAAACAAAAAAGCTCTTGAATTTTTATGGGAAAAGATGTTTGGAAATTGGAGATCAGAGTATTAAAATTTGTGTGGAACGTATTGATGTATTGATGTTTTCGTAGATTTTTTCACATCTCTATAAGTTCAATATTGATTTAGAGAATGAATTAATGTTTCGATTATATGGTTAATGAAACATAAAAAATAATAATAAAATTTCATTAATGTGAATATTATCTAAAATAATAAGTATTTTTAATTTATTGACAAAACGTAAATTTTTATTTAATATTATTTTATTTTTATAAGGACTTTTTTTTCAAATATAGTAAAATGAGCTAAAATATTATATTTACAAATATAACTATTTGTGATAGATTTGACTAGACTACTATATATGTCTCGATAAACGCAAATAATAGTCTATCGCGATTTATCACATATAGACTGTAATTTTTTTGTATTATTTATAAATATTTTAAGCAATTTTGTCATGTAAAATAATTTTTCATTTGGTTCGAGATGACTAAATTTGTAAAATTTGAGAAACTAATGAACAAAAATATTAAAAATTTGTAAATCCATATCATATAGCATCTTGTCCATTTGACCTTTAATGCATTAAAAATTTTGAACTAGTCATTCCTGTTGAGGAATTTCACATTAAAGTAAGTTTTGAAGGCTTGTTTGTTTCCGTCTTGCTCCGTGAATATCTCTAATTTTGACGATCTATATTTGTGTATGTGCAGTTCTTATCGTACCTTCTATTATCGGCCGCCTCGGCGGGATTAGGTGCGGGGATCGACCTGAGAGTGAATTTTAAAGAGTTGGTTGGCAATTTTTTCAACTCATTTTTTGACAAGGGCAGTGCTGCAGCAGCTATTCTTCTCATTGCATTTTTTTGTGCTGCCATTGTTTCCATTCTCTCTTCCTTAGCTCTTATTAGAAAGCCTTAA

mRNA sequence

ATGGCAGCCTCAAAGGGTTCAAGAATTGCTTCTCTTATATTGAGAGTTTTGACCTTCATTTTGATCTTTATTTCTCTCTTAATCATCGCCACCAATTCCAAAACTATTCTTCAAGGGACCGTAAGTGAAACAAAAGTTGAGTTCAAAGATGTTTATTCTTATCGTTATTTGCTAGCAGCGGCTGTTATTGGGGCTGCTTTGAGTCTTCTTCAAATTGCTCTCGCCATTTACTCTCTTGTTACCAAAGGCGAGGGAACTCCACTTTTCGATTTGTTCAGCGATAAGTTCTTATCGTACCTTCTATTATCGGCCGCCTCGGCGGGATTAGGTGCGGGGATCGACCTGAGAGTGAATTTTAAAGAGTTGGTTGGCAATTTTTTCAACTCATTTTTTGACAAGGGCAGTGCTGCAGCAGCTATTCTTCTCATTGCATTTTTTTGTGCTGCCATTGTTTCCATTCTCTCTTCCTTAGCTCTTATTAGAAAGCCTTAA

Coding sequence (CDS)

ATGGCAGCCTCAAAGGGTTCAAGAATTGCTTCTCTTATATTGAGAGTTTTGACCTTCATTTTGATCTTTATTTCTCTCTTAATCATCGCCACCAATTCCAAAACTATTCTTCAAGGGACCGTAAGTGAAACAAAAGTTGAGTTCAAAGATGTTTATTCTTATCGTTATTTGCTAGCAGCGGCTGTTATTGGGGCTGCTTTGAGTCTTCTTCAAATTGCTCTCGCCATTTACTCTCTTGTTACCAAAGGCGAGGGAACTCCACTTTTCGATTTGTTCAGCGATAAGTTCTTATCGTACCTTCTATTATCGGCCGCCTCGGCGGGATTAGGTGCGGGGATCGACCTGAGAGTGAATTTTAAAGAGTTGGTTGGCAATTTTTTCAACTCATTTTTTGACAAGGGCAGTGCTGCAGCAGCTATTCTTCTCATTGCATTTTTTTGTGCTGCCATTGTTTCCATTCTCTCTTCCTTAGCTCTTATTAGAAAGCCTTAA

Protein sequence

MAASKGSRIASLILRVLTFILIFISLLIIATNSKTILQGTVSETKVEFKDVYSYRYLLAAAVIGAALSLLQIALAIYSLVTKGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDLRVNFKELVGNFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIRKP

Homology

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BLAST of Cla004673 vs. Swiss-Prot
Match: CSPLE_RICCO (CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-30
Identity = 74/161 (45.96%), Postives = 105/161 (65.22%), Query Frame = 1


Query: 4   SKGSRIASLILRVLTFILIFISLLIIATNSKTILQGTVSETKVEFKDVYSYRYLLAAAVI 63
           S  SR+A+LILR+LTFI +  SL+I+ TN+ T L+  + E KV FKDVY+YRY+LA  VI
Sbjct: 7   SLASRMAALILRILTFIFLIASLVILTTNTAT-LELDLVEVKVHFKDVYAYRYMLATIVI 66

Query: 64  GAALSLLQIALAIYSLVT-----KGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDLRVN 123
           G A ++LQIA  +Y + T      G+G   FD F DK +SY+L++ A+AG  +  D++  
Sbjct: 67  GLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPV 126

Query: 124 FKELVGNFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLAL 160
           F       F++F +KG A+A++LLI F C A++S+ SS AL
Sbjct: 127 FSG--SGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

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BLAST of Cla004673 vs. Swiss-Prot
Match: CSPLL_POPTR (CASP-like protein 4D1 OS=Populus trichocarpa GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 6.7e-28
Identity = 73/167 (43.71%), Postives = 103/167 (61.68%), Query Frame = 1


Query: 2   AASKGSRIASLILRVLTFILIFISLLIIATNSKTILQGTVSETKVEFKDVYSYRYLLAAA 61
           A S  SR+ +L LRVLTF  + +SL+I+ TN+ TI  G + E KV  KD YSYRY+LAA 
Sbjct: 14  APSMVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIG-IDEFKVRSKDFYSYRYMLAAI 73

Query: 62  VIGAALSLLQIALAIYSL------VTKGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDL 121
             G   ++LQIAL +  +       T G+G  +FD + DK +SY+L + A+A  GA  +L
Sbjct: 74  AFGLTYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKEL 133

Query: 122 RVNFKELVGNFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIRK 163
           +     L G   + FF+KG A+A++LL+ F C AI+S+ SS AL +K
Sbjct: 134 KTQLAGLGG---DKFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

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BLAST of Cla004673 vs. Swiss-Prot
Match: CSPLC_SOYBN (CASP-like protein 4D1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-27
Identity = 72/168 (42.86%), Postives = 107/168 (63.69%), Query Frame = 1


Query: 2   AASKGSRIASLILRVLTFILIFISLLIIATNSKTILQGTVSETKVE--FKDVYSYRYLLA 61
           ++S GSR   L+LRVLTF+ + I+L++IA     I++ T  ET VE  F D+Y+YRY+++
Sbjct: 12  SSSTGSRTVLLLLRVLTFVFLLIALILIA-----IVKQTDDETGVEIKFNDIYAYRYMIS 71

Query: 62  AAVIGAALSLLQIALAIYSLVT-----KGEGTPLFDLFSDKFLSYLLLSAASAGLGAGID 121
             +IG A +LLQ+AL+I+++V+      G+G  LFD F DK +SYLL+S ++AG G  ++
Sbjct: 72  TIIIGFAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVE 131

Query: 122 LRVNFKELVGNFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIRK 163
           L            NSF DK +A+A++LLIAF   A+ S  +S AL +K
Sbjct: 132 LGRGVPS------NSFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

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BLAST of Cla004673 vs. Swiss-Prot
Match: PIMP1_CAPAN (CASP-like protein PIMP1 OS=Capsicum annuum GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.4e-25
Identity = 69/157 (43.95%), Postives = 98/157 (62.42%), Query Frame = 1


Query: 11  SLILRVLTFILIFISLLIIATNSKTILQGTVSETKVEFKDVYSYRYLLAAAVIGAALSLL 70
           SLI+R+LT I + IS ++IATN++T+      + K++FKD Y+YRYL+A  +IG A +LL
Sbjct: 14  SLIVRILTLICLLISFIVIATNNQTV-STVAGDVKIKFKDFYAYRYLIATVIIGMAYTLL 73

Query: 71  QIALAIYSLVT----KGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDLRVNFKELVG-N 130
           QIA +I  L T     GEG  LFD + DKF+SY L++ A+A  G   DL    K+L G +
Sbjct: 74  QIAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMTQDL----KQLEGSD 133

Query: 131 FFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIRK 163
            ++ F +  +AAA++ LI FF A   SI SS  L ++
Sbjct: 134 NYSKFLNTSNAAASLCLIGFFFAVASSIFSSYNLPKR 165

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BLAST of Cla004673 vs. Swiss-Prot
Match: CSPLB_ARATH (CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.6e-24
Identity = 66/162 (40.74%), Postives = 99/162 (61.11%), Query Frame = 1


Query: 8   RIASLILRVLTFILIFISLLIIATNSKTIL-QGTVSETKVEFKDVYSYRYLLAAAVIGAA 67
           ++  L+LRVLT + + I+L+I++TNS TI+ QG  S  K  FKDVY+YRY+L+AAVIG  
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQG--SALKFHFKDVYAYRYMLSAAVIGLV 73

Query: 68  LSLLQIALAIYSLVT--KGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDLRVNFKELVG 127
            +++Q+   I    T  K       D + DK +SYL+ + ++AG G   DL+  F  LV 
Sbjct: 74  YAVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVA 133

Query: 128 ----NFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIRK 163
               +  + FF KG A+A++LL AF C A++S+ SS A+ ++
Sbjct: 134 LDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of Cla004673 vs. TrEMBL
Match: A0A0A0KNU7_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515030 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-54
Identity = 121/161 (75.16%), Postives = 136/161 (84.47%), Query Frame = 1


Query: 3   ASKGSRIASLILRVLTFILIFISLLIIATNSKTIL-QGTVSETKVEFKDVYSYRYLLAAA 62
           ASKG RIASLILR LTFIL FISLLI+ATNSKT+L  GTV E KV+F +V SYRYL+A A
Sbjct: 2   ASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATA 61

Query: 63  VIGAALSLLQIALAIYSLVTKGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDLRVNFKE 122
           VIG ALSLLQI   IY L+T GEGTPLF +FSD+ L+YLLLS ASAGLGAGIDLRVN KE
Sbjct: 62  VIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKE 121

Query: 123 LV-GNFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIR 162
           L+ G +FNSFFDK +A +AILL+AF CAAIVS+LSSLALIR
Sbjct: 122 LLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162

[Close]

BLAST of Cla004673 vs. TrEMBL
Match: A0A0A0KS88_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515020 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.2e-53
Identity = 115/162 (70.99%), Postives = 138/162 (85.19%), Query Frame = 1


Query: 3   ASKGSRIASLILRVLTFILIFISLLIIATNSKTILQGTVSETKVEFKDVYSYRYLLAAAV 62
           ASKG RIAS+ILR+LTFI IFISLLI+ATN+KT+ + TV+E KV+F DV SYRY++AA V
Sbjct: 2   ASKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAATV 61

Query: 63  IGAALSLLQIALAIYSLVTKGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDLRVNFKEL 122
           IG AL LLQIA  IY LVTK EGTPLF +FSD+ L+YLLLSAASAGLG+GIDLR N K L
Sbjct: 62  IGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVL 121

Query: 123 V-GNFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIRKP 164
           V G+ ++SFFDKG+A +AIL +AF C+AIVS+LSSLALI+KP
Sbjct: 122 VDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 163

[Close]

BLAST of Cla004673 vs. TrEMBL
Match: A0A0A0KU83_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515010 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.6e-34
Identity = 82/162 (50.62%), Postives = 109/162 (67.28%), Query Frame = 1


Query: 1   MAASKGSRIASLILRVLTFILIFISLLIIATNSKTILQGTVSETKVEFKDVYSYRYLLAA 60
           M  S GSRI SLILR+LTF+ +FIS  I+ T S+T     V   K+ F D + +RY+LA 
Sbjct: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQT-----VRPYKLHFNDYHGFRYMLAT 60

Query: 61  AVIGAALSLLQIALAIYSLVTKGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDLRVNFK 120
            +IG   +LLQIA +++++V  G+GT LFD F DKFLSYLL + A+AG G G+DL+   K
Sbjct: 61  IIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK---K 120

Query: 121 ELVGNFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIRK 163
               + F  FFDK  AA+ +LL AFFC+A VSILSS AL ++
Sbjct: 121 VDPDDLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of Cla004673 vs. TrEMBL
Match: M5X682_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa024507mg PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-29
Identity = 74/160 (46.25%), Postives = 109/160 (68.12%), Query Frame = 1


Query: 3   ASKGSRIASLILRVLTFILIFISLLIIATNSKTILQGTVSETKVEFKDVYSYRYLLAAAV 62
           A+  SRIASLILR+LTFIL+ ISL+++ATN+   +  +  ++KV F D Y+YRY+LA  V
Sbjct: 5   ATASSRIASLILRILTFILLLISLIVLATNT---IGSSDDDSKVRFTDFYAYRYMLATIV 64

Query: 63  IGAALSLLQIALAIYSLVTKGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDLRVNFKEL 122
           IG A SLLQ+ L I+++V  G+G P  D F DKF+SY+L + A+AG G  +DL+      
Sbjct: 65  IGNAYSLLQLVLTIFNIVRGGDGMPFLDFFGDKFISYVLATGAAAGFGLTVDLKRLMDAS 124

Query: 123 VGNFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIRK 163
             +  N F DK  A+A++LL+AF   AI+S++S+  L ++
Sbjct: 125 EVDMLN-FDDKAFASASLLLLAFVTTAILSVISAYTLPKR 160

[Close]

BLAST of Cla004673 vs. TrEMBL
Match: D7TLT7_VITVI (CASP-like protein OS=Vitis vinifera GN=VIT_13s0019g01380 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.1e-28
Identity = 77/167 (46.11%), Postives = 108/167 (64.67%), Query Frame = 1


Query: 2   AASKGSRIASLILRVLTFILIFISLLIIATNSKTILQGTVSETKVEFKDVYSYRYLLAAA 61
           ++S  S + SL+LR+LTFI I ISL I+ TNS TI+  + +E K+ FKDV++YRY+L A 
Sbjct: 5   SSSTPSPVISLVLRLLTFISILISLTILTTNSATIVVNS-TELKLRFKDVHAYRYMLFAL 64

Query: 62  VIGAALSLLQIALAIYS------LVTKGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDL 121
           V+G    LLQI   IY       + + GE    FD ++DK +SY+L +   A  GA +DL
Sbjct: 65  VVGLPYILLQIVFGIYHVSMGKRISSSGESLLQFDFYADKVMSYILATGTGAAFGATLDL 124

Query: 122 RVNFKELVGNFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIRK 163
           +  F EL G+ +N FF+KGSAAA+ +L AF   A+ S+ SSLAL +K
Sbjct: 125 KEVFSEL-GSNYNKFFNKGSAAASFILFAFLFTAVSSVFSSLALPKK 169

[Close]

BLAST of Cla004673 vs. NCBI nr
Match: gi|700196121|gb|KGN51298.1| (hypothetical protein Csa_5G515030 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 2.4e-54
Identity = 121/161 (75.16%), Postives = 136/161 (84.47%), Query Frame = 1


Query: 3   ASKGSRIASLILRVLTFILIFISLLIIATNSKTIL-QGTVSETKVEFKDVYSYRYLLAAA 62
           ASKG RIASLILR LTFIL FISLLI+ATNSKT+L  GTV E KV+F +V SYRYL+A A
Sbjct: 2   ASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATA 61

Query: 63  VIGAALSLLQIALAIYSLVTKGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDLRVNFKE 122
           VIG ALSLLQI   IY L+T GEGTPLF +FSD+ L+YLLLS ASAGLGAGIDLRVN KE
Sbjct: 62  VIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKE 121

Query: 123 LV-GNFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIR 162
           L+ G +FNSFFDK +A +AILL+AF CAAIVS+LSSLALIR
Sbjct: 122 LLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162

[Close]

BLAST of Cla004673 vs. NCBI nr
Match: gi|659117983|ref|XP_008458889.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 217.2 bits (552), Expect = 2.1e-53
Identity = 117/162 (72.22%), Postives = 136/162 (83.95%), Query Frame = 1


Query: 3   ASKGSRIASLILRVLTFILIFISLLIIATNSKTILQGTVSETKVEFKDVYSYRYLLAAAV 62
           ASKG RIASLILR+LTFI IFISLLI+ATNSKT  +GTVSE KV+F +V SYRYLLA AV
Sbjct: 2   ASKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTVSEIKVKFDNVTSYRYLLATAV 61

Query: 63  IGAALSLLQIALAIYSLVTKGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDLRVNFKEL 122
           IG ALSLLQI   IY LVT  EGTPLF + SD+ L+YLLLS ASAG GAGIDL+VN KEL
Sbjct: 62  IGGALSLLQIIFNIYHLVTNREGTPLFYIISDQLLAYLLLSGASAGFGAGIDLKVNIKEL 121

Query: 123 V-GNFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIRKP 164
           +  N+++SFF++G+A +AILL+AF CAAIVS+LSSLALIR P
Sbjct: 122 LESNYYDSFFNEGNAGSAILLLAFICAAIVSLLSSLALIRNP 163

[Close]

BLAST of Cla004673 vs. NCBI nr
Match: gi|449450002|ref|XP_004142753.1| (PREDICTED: CASP-like protein 4D1 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 4.6e-53
Identity = 115/162 (70.99%), Postives = 138/162 (85.19%), Query Frame = 1


Query: 3   ASKGSRIASLILRVLTFILIFISLLIIATNSKTILQGTVSETKVEFKDVYSYRYLLAAAV 62
           ASKG RIAS+ILR+LTFI IFISLLI+ATN+KT+ + TV+E KV+F DV SYRY++AA V
Sbjct: 2   ASKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAATV 61

Query: 63  IGAALSLLQIALAIYSLVTKGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDLRVNFKEL 122
           IG AL LLQIA  IY LVTK EGTPLF +FSD+ L+YLLLSAASAGLG+GIDLR N K L
Sbjct: 62  IGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVL 121

Query: 123 V-GNFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIRKP 164
           V G+ ++SFFDKG+A +AIL +AF C+AIVS+LSSLALI+KP
Sbjct: 122 VDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 163

[Close]

BLAST of Cla004673 vs. NCBI nr
Match: gi|659117979|ref|XP_008458887.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 165.6 bits (418), Expect = 7.1e-38
Identity = 85/163 (52.15%), Postives = 117/163 (71.78%), Query Frame = 1


Query: 1   MAASKGSRIASLILRVLTFILIFISLLIIATNSKTILQGTVSETKVEFKDVYSYRYLLAA 60
           M A   ++IAS +LRVLTF+ + +S++++ TNSKTI        +V F +V SYRY +A 
Sbjct: 1   MEAKMATKIASFVLRVLTFVFLLVSIIVLGTNSKTI-----GNDEVHFHNVNSYRYAMAT 60

Query: 61  AVIGAALSLLQIALAIYSLVTKGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDLRVNFK 120
            +IG A +LLQIALA+Y LVTK +G+ LFD + DK LSY LL+ A+A LG+ +DL+ N  
Sbjct: 61  IIIGGAFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANM- 120

Query: 121 ELVGNFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIRKP 164
               +  NSFFD+G+AAAA+LL+AF C+AI+S+LSSLAL  KP
Sbjct: 121 ----DMLNSFFDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 153

[Close]

BLAST of Cla004673 vs. NCBI nr
Match: gi|659117986|ref|XP_008458890.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-34
Identity = 81/162 (50.00%), Postives = 111/162 (68.52%), Query Frame = 1


Query: 1   MAASKGSRIASLILRVLTFILIFISLLIIATNSKTILQGTVSETKVEFKDVYSYRYLLAA 60
           M  S GSR+ SLILR+LTF+ +FIS  I+ T S+T     V   K+ F   + +RY+LA 
Sbjct: 1   MENSSGSRVTSLILRILTFVFLFISFFILITTSQT-----VRPYKLHFNSYHGFRYMLAT 60

Query: 61  AVIGAALSLLQIALAIYSLVTKGEGTPLFDLFSDKFLSYLLLSAASAGLGAGIDLRVNFK 120
            +IG   +LLQIA +++++V  G+GT LFD F DKFLSYLL + A+AG G G+DL+   K
Sbjct: 61  IIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK---K 120

Query: 121 ELVGNFFNSFFDKGSAAAAILLIAFFCAAIVSILSSLALIRK 163
           +   + F +FFDK  AA+A+LL AFFC+A VSILSS AL ++
Sbjct: 121 KDPDDLFRTFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 154

The following BLAST results are available for this feature:

BLAST of Cla004673 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSPLE_RICCO	2.5e-30	45.96	CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1	[more]
CSPLL_POPTR	6.7e-28	43.71	CASP-like protein 4D1 OS=Populus trichocarpa GN=POPTR_0010s21230g PE=2 SV=2	[more]
CSPLC_SOYBN	1.5e-27	42.86	CASP-like protein 4D1 OS=Glycine max PE=2 SV=1	[more]
PIMP1_CAPAN	2.4e-25	43.95	CASP-like protein PIMP1 OS=Capsicum annuum GN=PIMP1 PE=2 SV=1	[more]
CSPLB_ARATH	2.6e-24	40.74	CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1	[more]

BLAST of Cla004673 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNU7_CUCSA	1.7e-54	75.16	CASP-like protein OS=Cucumis sativus GN=Csa_5G515030 PE=3 SV=1	[more]
A0A0A0KS88_CUCSA	3.2e-53	70.99	CASP-like protein OS=Cucumis sativus GN=Csa_5G515020 PE=3 SV=1	[more]
A0A0A0KU83_CUCSA	2.6e-34	50.62	CASP-like protein OS=Cucumis sativus GN=Csa_5G515010 PE=3 SV=1	[more]
M5X682_PRUPE	1.4e-29	46.25	CASP-like protein OS=Prunus persica GN=PRUPE_ppa024507mg PE=3 SV=1	[more]
D7TLT7_VITVI	2.1e-28	46.11	CASP-like protein OS=Vitis vinifera GN=VIT_13s0019g01380 PE=3 SV=1	[more]

BLAST of Cla004673 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700196121\|gb\|KGN51298.1\|	2.4e-54	75.16	hypothetical protein Csa_5G515030 [Cucumis sativus]	[more]
gi\|659117983\|ref\|XP_008458889.1\|	2.1e-53	72.22	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]
gi\|449450002\|ref\|XP_004142753.1\|	4.6e-53	70.99	PREDICTED: CASP-like protein 4D1 [Cucumis sativus]	[more]
gi\|659117979\|ref\|XP_008458887.1\|	7.1e-38	52.15	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]
gi\|659117986\|ref\|XP_008458890.1\|	1.6e-34	50.00	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla004673	Cla004673.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 6..147 score: 2.7
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 7..162 score: 3.8
None	No IPR available	PANTHER	PTHR11615:SF148	SUBFAMILY NOT NAMED	coord: 7..162 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla004673	CSPI05G17620	Wild cucumber (PI 183967)	cpiwmB369
Cla004673	Cucsa.010700	Cucumber (Gy14) v1	cgywmB359
Cla004673	CmaCh04G026400	Cucurbita maxima (Rimu)	cmawmB652
Cla004673	CmoCh04G027620	Cucurbita moschata (Rifu)	cmowmB646
Cla004673	Lsi02G016480	Bottle gourd (USVL1VR-Ls)	lsiwmB170
Cla004673	Cp4.1LG01g23970	Cucurbita pepo (Zucchini)	cpewmB381
Cla004673	CsGy5G017250	Cucumber (Gy14) v2	cgybwmB339
Cla004673	MELO3C033723.2	Melon (DHL92) v3.6.1	medwmB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla004673	Watermelon (97103) v1	wmwmB015
Cla004673	Watermelon (97103) v1	wmwmB026
Cla004673	Cucumber (Gy14) v1	cgywmB059
Cla004673	Cucumber (Gy14) v1	cgywmB302
Cla004673	Cucurbita maxima (Rimu)	cmawmB252
Cla004673	Cucurbita moschata (Rifu)	cmowmB243
Cla004673	Wild cucumber (PI 183967)	cpiwmB287
Cla004673	Wild cucumber (PI 183967)	cpiwmB373
Cla004673	Melon (DHL92) v3.5.1	mewmB003
Cla004673	Melon (DHL92) v3.5.1	mewmB042
Cla004673	Melon (DHL92) v3.5.1	mewmB551
Cla004673	Watermelon (Charleston Gray)	wcgwmB008
Cla004673	Watermelon (Charleston Gray)	wcgwmB173
Cla004673	Watermelon (Charleston Gray)	wcgwmB250
Cla004673	Watermelon (Charleston Gray)	wcgwmB357
Cla004673	Cucumber (Chinese Long) v2	cuwmB289
Cla004673	Cucumber (Chinese Long) v2	cuwmB363
Cla004673	Cucumber (Chinese Long) v2	cuwmB367
Cla004673	Cucurbita pepo (Zucchini)	cpewmB166
Cla004673	Bottle gourd (USVL1VR-Ls)	lsiwmB126
Cla004673	Bottle gourd (USVL1VR-Ls)	lsiwmB285
Cla004673	Cucumber (Gy14) v2	cgybwmB268
Cla004673	Cucumber (Gy14) v2	cgybwmB343
Cla004673	Melon (DHL92) v3.6.1	medwmB043
Cla004673	Melon (DHL92) v3.6.1	medwmB537
Cla004673	Silver-seed gourd	carwmB0246
Cla004673	Silver-seed gourd	carwmB0679
Cla004673	Cucumber (Chinese Long) v3	cucwmB298
Cla004673	Cucumber (Chinese Long) v3	cucwmB387
Cla004673	Cucumber (Chinese Long) v3	cucwmB391
Cla004673	Watermelon (97103) v2	wmwmbB020
Cla004673	Watermelon (97103) v2	wmwmbB023
Cla004673	Watermelon (97103) v2	wmwmbB039
Cla004673	Watermelon (97103) v2	wmwmbB042