Lsi02G027730 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGTAATATGTGTATATGTCAGCTTAGAGATATCTTTGTGTACCTACTGATCATCTGACCTAATTTGGTATATTTTTCAAAAAAGAAAAAAAAGAAAGAAAGCAACAACCTCGACAAACTCAACTGGATCAGTGAACTTTAGAACTTTTTGCATGAATTTATTAAATACTATATTTTTATGCATGAAATTAATAAATTGCGGGTCATTGTTTTTATATTATTTCATTTATTTGAAATTTTTAGTATCATTTATTACAAAATTATAATCACCACATACTTATATTGAGTAATAAAATTTCTAAAAGTGTTGGTCCTTTTTTGAGTGGGATAGGTGGGTGTAGTGAAATTTCACGTTTTGATATATATATTTATATAATAATTCAAAGCTTATCTTTTATTCTCAATTTTTTTTTAAGAAAAAAAGAAGTGAATATGTGTCTCTTTAAAAGATTAATAAAAAAAAAATAGTTTATTTTTAATGCATCTTTTTTGAAGTGATGCATTCCGATAAAATAAAAAATTACTTGTTTTTCTAATTTTTCTTTTAAATAACTTTTTTTTTTTTTGAGACGTTAGCTACTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTAATTTACAATATTTGTCCAATTAATCCTTACATGATTAGGATGATCAAAGCTCATTATGATAATACTATTTTTTTTTATATTATTAAAAAGTAAACAAAAAATTAACAACCAAAAAGTACCCTTGTTTTTCAAAATTTCTATACAAATTTTGCAAATTAACATTGGATACAAATTTGTGCATTGACCTTAAAATTAACGAAGTCTACCATAAATTGTTTTGGACCTTTTGGTAATTTGGTGGACATGGAAAACTCAATTAACTTTGACCATCTATATAGAAATTCCACCAACTTCCAAATGAACTATAGATTTTCTTTGAAATTTTCAATTTTTTTTTTTTTTTTTTTTGGTAATTGGCCAATTAGTGATCTTGGTTTTCTTTTTCCTTCCAATTAAAATATCCTATAATGGAAAACATCATGAAACTCACAAATTTCAGCCTACTTATCAATTTTGTGTATGACTCGTGCATTAAGGGTTTGAATTAATTAATGGCAACATGTTTCCTTCAAAGCTTTCTAAAAACAACAAAATTTAACTGCTTTTTGCTAATTAATTGAGTATCTAACTGCTTCATTTTCATTTTCTTTTATATTCGTGAGTGTCCGACTAGCTTACTGCTTCATTTTCTAAAAGCAACAAAACTTGATTTCTATATATATATATATATATATAAAGTATTCATGATTTTCTCAAATATTGATAGAAGTTACAATTTTATATGATCTCCCAATTTTAGAATTAGAAGAATCAAAATATTGTACAAAATAAACACCAAATTAATTAAAGTAGTTTTTTTTTAAATAAAGTACAAGAGATCGGGTGTACTTGAATATCTCAACTAGATTGACACGTCTATGTATAGCTCCCTCATCACAAATAGAGATGTCCACACGGCGGGGCCAGGGATGACTTCCGCGTCCCCATCCCTGCTACCGATTTCATTTCCCATCCTTGCAAAATTTTTCACGTGGATTGGAGCGGAAATTTTCCACAGAAAATTCGCAGTGATTGGATTCCCTGAGAATTTTTTCCTTTTGAATTTTTTTTTAAAAAATTTTAACTAACTTCTATCACTACTATGAAATTTTTTTACTTAAATAGTTAAATTTTTTACTCATATGTGACAAAAAGATAGGATTAAAATGTTTAATTTCATAATTCTAAAAATTAAAATTAAAATACTACAACTACATATCCTAATCTAAACTTAATATATATATAAATTAGAATTAAAATTTTATATATATAATGGGGCGGGGCGGGGATAGAGGGGGGAATATAATTTCCGTCCCTGTCTCCATTTAGCCAACCGAAAAAAATTTCTCCCCACTACCTCCCCATTTCCCGTTTAATCACGATTTTCCAACCTATTCGTGGGGCCCAGTTCTACCAGTTAAATGGACATCTCTAATCACAAATAAATTAAACTAGTTGATGAATCCAACTTCATTTTCTCAAATTTTCAAGTGCATGTTTGGGAGTGATTTTAAAATTATCAAAATTACTTTTATTATTTTAAAAATAATTTTTAATCACTTAAAATTAATTTAATATTAAATTTTACACTTTTAAATGTGATTTTTATATTATCAAAATTAATTTGAAAAAATTAAAAACATATTTTTGATTTTTAAAATAAAAAAGTGATTTATTTAACTATTTTAAAATCATTCCAAAAATGCTTTTAACACCCCTAAAAGCATGGCAGTTGGAATTTTAAATTTTAAATTTAAGTGAAAATATACCGAAGCTTAGTGGGCAAGAACTATGATGACCATGCAATCACATTGTGACATGTGGAACTCCAATATAGAAAATAAGTCATGGTCGTTAAGAGGGTTGGTGATATATTCACTAAAACCAAAACAATCATTTTAATCAAACTTTTTTTTATTAATTCAAGTTGTTGCAGAAATTGTGGTCTAAAATGTCAAAATTAAAAAAATATATGGTTTATCCATTTAAAAGAATAACAATATTTAAGCTATAATATTGCCCCAAAACCTAGAATCCATTAAGCATCCCTGATCTTAAAATTGTATGCATAATGAATATGCATCACATGAACATGAATAGATAGGTAGCAATTCTTTTAAATTTCATATATATATATACTCAAATACTTATTGAATAAGACATACTTTTTTTTTTCTCGAAGTAATTCTATGTAAAGTAATTGAAAAAATGGTTTTCAAACAAATTAATTTACTAGATGCATAAGAATGTTAAGATAAAGTGTCAAATTCATATTCCAAATCAATGGTTCAAAATTTCTTGAGTGACATTATATTAACCAATTAACATTTTGATTTTGAGACATATAATTTTACGAACCATATATGATCTTTTTTTAGTACATGTACTTTCAAAATATTTATTTTAGTTCATGTTGTTTTAAAACTTTTTATTTAGCAATTGCCCATTTAAAAAGCAATTGTTTTCGCTTTTTTTACTCTCATTACTTTTTATCACGATTTCAACACACATTATATACCGAACTCAATAAATTATTTCATTAAATATTTTCATTGTTTTGTATTAAAGGGAAGTTATGGTTGAATTAGCGATGGGTTATTTCATTTTTTGTTATGAGTTTGAATAAGAATCAACATGAATTTATCTTCAATCTACCTATATCAACTCTAATATTATATTAGATAAATACGAGTTTTCATTTTTACTCATCTCATTGTCAATTGATTTTGAGATAGAACTCCAAGTTTATCTATAATGGTATCATAGTCCATGAAACTCAAACGGATATTCTGTATAAAAAAAAAAATAAAAAAAAACATCTTAAAGAGAAATATGTTAGAAGATTCTACAAATTGTTATAGGTATATAATTTGTGTTAAAATTGTACAAGATAACATGACTTCCTAGAAGTACAAGATTAAAAAATTAGTATTTTGAAAGTACAATTAATATTAAACCAAATAAAATTAGAAAAATGATTTATTAATAAGCTTTAAAACCCCATTGAAATTATGTATCCTATGGGCCCAACTATTTTTGTTTAAAATCTTGTGTTATATGAATAAGATTTCTTTCATAAGTACATGATCTGTTGAAGTAATGATAACCCAATTTAAGTAGTCAAGGCTTCGATCATTTTCCTACTGCTTATTTTCCACAAACCCAAGTGCTTATATAAGAACCACTCTTCCCCACAACCTTAAAACCACACAAATATTAATTAAGGCTTAATTCACATCCAAATTTGAGAAAATGAAGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACCAGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTGGTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTCAGAAAATTTCTAATATTCTCGTAGTACTTATTTTAATTTCTTTTTTTCTTTTTTTCTTTCTAACATGGTTGAATCCATTGTATTGATTTTAAATGTTATCGACAGTGATAGTCAAAGTAATATATGTGTATATAATTCTCTATACTACATGTAGTGCGGTTAAGATTTTTCTGATGAAATAATTCGTAGAAAAGATATTTTTGCCAACGTCAAATATGAAACGTTGGAAAAAGTTGCCCTCGCTATGACTAACACTTAAAATGAGAGTAAATTTTCCTCTCTTGATATTGGATGTTATTCATTTTTTATTTTTATTTTTTTTTTTGGGTTATTGATGAACTTGGCAGCTGAGAAGAAAGTAGAAAGCTGTGTGAACTCGTGTGGTCAAACGTGCATGAAAGCTTAGAAAGCAAAAGGATGAAGGGAGAGAGGAGATGGAGCTGGGATTGGCTTAAAGATATACTATGAATAAACAAAAATCAGTGGTCAAAACAAAACCATTGGTTTACAAGGCTTATTCCAGATTTAAGCATATGTTTTGATATATTATATAGTCTCAAGTTTCTGCATGTGGTAGTTAA ATGAGGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACCAGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTGGTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTCAGAAAATTTCTAATATTCTCGTATCTCAAGTTTCTGCATGTGGTAGTTAA ATGAGGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACCAGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTGGTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTCAGAAAATTTCTAATATTCTCGTATCTCAAGTTTCTGCATGTGGTAGTTAA MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNILVSQVSACGS
BLAST of Lsi02G027730 vs. TrEMBL
Match: A0A0A0KC18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446640 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 7.2e-46 Identity = 88/103 (85.44%), Postives = 98/103 (95.15%), Query Frame = 1
BLAST of Lsi02G027730 vs. TrEMBL
Match: F6HX25_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04840 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.8e-20 Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 1
BLAST of Lsi02G027730 vs. TrEMBL
Match: A5AWP0_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_004511 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.8e-20 Identity = 48/104 (46.15%), Postives = 71/104 (68.27%), Query Frame = 1
BLAST of Lsi02G027730 vs. TrEMBL
Match: A0A061GI20_THECC (To encode a PR protein, Belongs to the plant thionin family with the following members:, putative OS=Theobroma cacao GN=TCM_028643 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.0e-19 Identity = 50/103 (48.54%), Postives = 71/103 (68.93%), Query Frame = 1
BLAST of Lsi02G027730 vs. TrEMBL
Match: V4ST32_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026803mg PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.7e-18 Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 1
BLAST of Lsi02G027730 vs. NCBI nr
Match: gi|700190113|gb|KGN45346.1| (hypothetical protein Csa_7G446640 [Cucumis sativus]) HSP 1 Score: 191.0 bits (484), Expect = 1.0e-45 Identity = 88/103 (85.44%), Postives = 98/103 (95.15%), Query Frame = 1
BLAST of Lsi02G027730 vs. NCBI nr
Match: gi|449470525|ref|XP_004152967.1| (PREDICTED: thionin-like protein 2 [Cucumis sativus]) HSP 1 Score: 120.9 bits (302), Expect = 1.3e-24 Identity = 60/95 (63.16%), Postives = 70/95 (73.68%), Query Frame = 1
BLAST of Lsi02G027730 vs. NCBI nr
Match: gi|659131068|ref|XP_008465492.1| (PREDICTED: thionin-like protein 2 [Cucumis melo]) HSP 1 Score: 117.1 bits (292), Expect = 1.9e-23 Identity = 61/95 (64.21%), Postives = 68/95 (71.58%), Query Frame = 1
BLAST of Lsi02G027730 vs. NCBI nr
Match: gi|225442677|ref|XP_002284798.1| (PREDICTED: thionin-like protein 2 [Vitis vinifera]) HSP 1 Score: 106.7 bits (265), Expect = 2.6e-20 Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 1
BLAST of Lsi02G027730 vs. NCBI nr
Match: gi|147789983|emb|CAN59844.1| (hypothetical protein VITISV_004511 [Vitis vinifera]) HSP 1 Score: 104.8 bits (260), Expect = 9.7e-20 Identity = 48/104 (46.15%), Postives = 71/104 (68.27%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |