Lsi02G027730.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G027730.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	To encode a PR protein, Belongs to the plant thionin family with the following members:, putative
Location	chr02 : 33975572 .. 33980729 (+)
Sequence length	321

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGTAATATGTGTATATGTCAGCTTAGAGATATCTTTGTGTACCTACTGATCATCTGACCTAATTTGGTATATTTTTCAAAAAAGAAAAAAAAGAAAGAAAGCAACAACCTCGACAAACTCAACTGGATCAGTGAACTTTAGAACTTTTTGCATGAATTTATTAAATACTATATTTTTATGCATGAAATTAATAAATTGCGGGTCATTGTTTTTATATTATTTCATTTATTTGAAATTTTTAGTATCATTTATTACAAAATTATAATCACCACATACTTATATTGAGTAATAAAATTTCTAAAAGTGTTGGTCCTTTTTTGAGTGGGATAGGTGGGTGTAGTGAAATTTCACGTTTTGATATATATATTTATATAATAATTCAAAGCTTATCTTTTATTCTCAATTTTTTTTTAAGAAAAAAAGAAGTGAATATGTGTCTCTTTAAAAGATTAATAAAAAAAAAATAGTTTATTTTTAATGCATCTTTTTTGAAGTGATGCATTCCGATAAAATAAAAAATTACTTGTTTTTCTAATTTTTCTTTTAAATAACTTTTTTTTTTTTTGAGACGTTAGCTACTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTAATTTACAATATTTGTCCAATTAATCCTTACATGATTAGGATGATCAAAGCTCATTATGATAATACTATTTTTTTTTATATTATTAAAAAGTAAACAAAAAATTAACAACCAAAAAGTACCCTTGTTTTTCAAAATTTCTATACAAATTTTGCAAATTAACATTGGATACAAATTTGTGCATTGACCTTAAAATTAACGAAGTCTACCATAAATTGTTTTGGACCTTTTGGTAATTTGGTGGACATGGAAAACTCAATTAACTTTGACCATCTATATAGAAATTCCACCAACTTCCAAATGAACTATAGATTTTCTTTGAAATTTTCAATTTTTTTTTTTTTTTTTTTTGGTAATTGGCCAATTAGTGATCTTGGTTTTCTTTTTCCTTCCAATTAAAATATCCTATAATGGAAAACATCATGAAACTCACAAATTTCAGCCTACTTATCAATTTTGTGTATGACTCGTGCATTAAGGGTTTGAATTAATTAATGGCAACATGTTTCCTTCAAAGCTTTCTAAAAACAACAAAATTTAACTGCTTTTTGCTAATTAATTGAGTATCTAACTGCTTCATTTTCATTTTCTTTTATATTCGTGAGTGTCCGACTAGCTTACTGCTTCATTTTCTAAAAGCAACAAAACTTGATTTCTATATATATATATATATATATAAAGTATTCATGATTTTCTCAAATATTGATAGAAGTTACAATTTTATATGATCTCCCAATTTTAGAATTAGAAGAATCAAAATATTGTACAAAATAAACACCAAATTAATTAAAGTAGTTTTTTTTTAAATAAAGTACAAGAGATCGGGTGTACTTGAATATCTCAACTAGATTGACACGTCTATGTATAGCTCCCTCATCACAAATAGAGATGTCCACACGGCGGGGCCAGGGATGACTTCCGCGTCCCCATCCCTGCTACCGATTTCATTTCCCATCCTTGCAAAATTTTTCACGTGGATTGGAGCGGAAATTTTCCACAGAAAATTCGCAGTGATTGGATTCCCTGAGAATTTTTTCCTTTTGAATTTTTTTTTAAAAAATTTTAACTAACTTCTATCACTACTATGAAATTTTTTTACTTAAATAGTTAAATTTTTTACTCATATGTGACAAAAAGATAGGATTAAAATGTTTAATTTCATAATTCTAAAAATTAAAATTAAAATACTACAACTACATATCCTAATCTAAACTTAATATATATATAAATTAGAATTAAAATTTTATATATATAATGGGGCGGGGCGGGGATAGAGGGGGGAATATAATTTCCGTCCCTGTCTCCATTTAGCCAACCGAAAAAAATTTCTCCCCACTACCTCCCCATTTCCCGTTTAATCACGATTTTCCAACCTATTCGTGGGGCCCAGTTCTACCAGTTAAATGGACATCTCTAATCACAAATAAATTAAACTAGTTGATGAATCCAACTTCATTTTCTCAAATTTTCAAGTGCATGTTTGGGAGTGATTTTAAAATTATCAAAATTACTTTTATTATTTTAAAAATAATTTTTAATCACTTAAAATTAATTTAATATTAAATTTTACACTTTTAAATGTGATTTTTATATTATCAAAATTAATTTGAAAAAATTAAAAACATATTTTTGATTTTTAAAATAAAAAAGTGATTTATTTAACTATTTTAAAATCATTCCAAAAATGCTTTTAACACCCCTAAAAGCATGGCAGTTGGAATTTTAAATTTTAAATTTAAGTGAAAATATACCGAAGCTTAGTGGGCAAGAACTATGATGACCATGCAATCACATTGTGACATGTGGAACTCCAATATAGAAAATAAGTCATGGTCGTTAAGAGGGTTGGTGATATATTCACTAAAACCAAAACAATCATTTTAATCAAACTTTTTTTTATTAATTCAAGTTGTTGCAGAAATTGTGGTCTAAAATGTCAAAATTAAAAAAATATATGGTTTATCCATTTAAAAGAATAACAATATTTAAGCTATAATATTGCCCCAAAACCTAGAATCCATTAAGCATCCCTGATCTTAAAATTGTATGCATAATGAATATGCATCACATGAACATGAATAGATAGGTAGCAATTCTTTTAAATTTCATATATATATATACTCAAATACTTATTGAATAAGACATACTTTTTTTTTTCTCGAAGTAATTCTATGTAAAGTAATTGAAAAAATGGTTTTCAAACAAATTAATTTACTAGATGCATAAGAATGTTAAGATAAAGTGTCAAATTCATATTCCAAATCAATGGTTCAAAATTTCTTGAGTGACATTATATTAACCAATTAACATTTTGATTTTGAGACATATAATTTTACGAACCATATATGATCTTTTTTTAGTACATGTACTTTCAAAATATTTATTTTAGTTCATGTTGTTTTAAAACTTTTTATTTAGCAATTGCCCATTTAAAAAGCAATTGTTTTCGCTTTTTTTACTCTCATTACTTTTTATCACGATTTCAACACACATTATATACCGAACTCAATAAATTATTTCATTAAATATTTTCATTGTTTTGTATTAAAGGGAAGTTATGGTTGAATTAGCGATGGGTTATTTCATTTTTTGTTATGAGTTTGAATAAGAATCAACATGAATTTATCTTCAATCTACCTATATCAACTCTAATATTATATTAGATAAATACGAGTTTTCATTTTTACTCATCTCATTGTCAATTGATTTTGAGATAGAACTCCAAGTTTATCTATAATGGTATCATAGTCCATGAAACTCAAACGGATATTCTGTATAAAAAAAAAAATAAAAAAAAACATCTTAAAGAGAAATATGTTAGAAGATTCTACAAATTGTTATAGGTATATAATTTGTGTTAAAATTGTACAAGATAACATGACTTCCTAGAAGTACAAGATTAAAAAATTAGTATTTTGAAAGTACAATTAATATTAAACCAAATAAAATTAGAAAAATGATTTATTAATAAGCTTTAAAACCCCATTGAAATTATGTATCCTATGGGCCCAACTATTTTTGTTTAAAATCTTGTGTTATATGAATAAGATTTCTTTCATAAGTACATGATCTGTTGAAGTAATGATAACCCAATTTAAGTAGTCAAGGCTTCGATCATTTTCCTACTGCTTATTTTCCACAAACCCAAGTGCTTATATAAGAACCACTCTTCCCCACAACCTTAAAACCACACAAATATTAATTAAGGCTTAATTCACATCCAAATTTGAGAAAATGAAGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACCAGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTGGTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTCAGAAAATTTCTAATATTCTCGTAGTACTTATTTTAATTTCTTTTTTTCTTTTTTTCTTTCTAACATGGTTGAATCCATTGTATTGATTTTAAATGTTATCGACAGTGATAGTCAAAGTAATATATGTGTATATAATTCTCTATACTACATGTAGTGCGGTTAAGATTTTTCTGATGAAATAATTCGTAGAAAAGATATTTTTGCCAACGTCAAATATGAAACGTTGGAAAAAGTTGCCCTCGCTATGACTAACACTTAAAATGAGAGTAAATTTTCCTCTCTTGATATTGGATGTTATTCATTTTTTATTTTTATTTTTTTTTTTGGGTTATTGATGAACTTGGCAGCTGAGAAGAAAGTAGAAAGCTGTGTGAACTCGTGTGGTCAAACGTGCATGAAAGCTTAGAAAGCAAAAGGATGAAGGGAGAGAGGAGATGGAGCTGGGATTGGCTTAAAGATATACTATGAATAAACAAAAATCAGTGGTCAAAACAAAACCATTGGTTTACAAGGCTTATTCCAGATTTAAGCATATGTTTTGATATATTATATAGTCTCAAGTTTCTGCATGTGGTAGTTAA

mRNA sequence

ATGAGGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACCAGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTGGTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTCAGAAAATTTCTAATATTCTCGTATCTCAAGTTTCTGCATGTGGTAGTTAA

Coding sequence (CDS)

ATGAGGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACCAGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTGGTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTCAGAAAATTTCTAATATTCTCGTATCTCAAGTTTCTGCATGTGGTAGTTAA

Protein sequence

MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNILVSQVSACGS

Homology

[Close]

BLAST of Lsi02G027730.1 vs. TrEMBL
Match: A0A0A0KC18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446640 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 7.2e-46
Identity = 88/103 (85.44%), Postives = 98/103 (95.15%), Query Frame = 1


Query: 1   MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           M+S+VLICFILSLVAGRSTASFGKCYAKCF+VCAITPGIP+GTCGAKCLADCLFIASSPM
Sbjct: 1   MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPM 60

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNILVSQVSA 104
           DL++MDTHYFCKLGCATS CTKFSTKKDPG+K+SN  V+  S+
Sbjct: 61  DLNYMDTHYFCKLGCATSRCTKFSTKKDPGKKLSNTSVTTYSS 103

[Close]

BLAST of Lsi02G027730.1 vs. TrEMBL
Match: F6HX25_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04840 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-20
Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 1


Query: 1   MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           +R++V++  ++ ++ G+STASF  CY KCF+ C ITP     +C  +CL DC+ I S P+
Sbjct: 6   IRALVMVGLVMGMLVGQSTASFKDCYTKCFIFCIITPNNTAFSCSLECLKDCV-IPSHPL 65

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDP-GQKISNILVSQVSAC 105
           D++  DT YFCKLGCA+SLCT  STKK+P G+K+ + + S  + C
Sbjct: 66  DIETADTTYFCKLGCASSLCTNLSTKKNPAGEKVESCVNSCSNKC 109

[Close]

BLAST of Lsi02G027730.1 vs. TrEMBL
Match: A5AWP0_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_004511 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.8e-20
Identity = 48/104 (46.15%), Postives = 71/104 (68.27%), Query Frame = 1


Query: 1   MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           +R++V++  ++ ++ G+STASF  CY KCF+ C ITP     +C  +CL DC+ I S P+
Sbjct: 6   IRALVMVGLVMGMLVGQSTASFKDCYTKCFIFCIITPNNTAFSCSLECLKDCV-IPSHPL 65

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDPGQ---KISNILVSQV 102
           D++  DT YFCKLGCA+ LCT  STKK+PG+   K+   L+ Q+
Sbjct: 66  DIETADTTYFCKLGCASXLCTNLSTKKNPGRESGKLCEFLLKQM 108

[Close]

BLAST of Lsi02G027730.1 vs. TrEMBL
Match: A0A061GI20_THECC (To encode a PR protein, Belongs to the plant thionin family with the following members:, putative OS=Theobroma cacao GN=TCM_028643 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-19
Identity = 50/103 (48.54%), Postives = 71/103 (68.93%), Query Frame = 1


Query: 3   SIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDL 62
           S++++C +L L+ G+STASF KCYA CF++C   P  P+ +C  KCL +C+ I SS ++ 
Sbjct: 47  SVMMVCLVLGLLVGQSTASFQKCYAGCFLLCVFIPPNPVFSCAIKCLNECI-IPSSTLE- 106

Query: 63  DHMDTHYFCKLGCATSLCTKFSTKKDPG-QKISNILVSQVSAC 105
              DT YFCKLGCATSLCT  S+K++PG QK+ + + S    C
Sbjct: 107 SGKDTQYFCKLGCATSLCTDLSSKENPGEQKVGSCVDSCSETC 147

[Close]

BLAST of Lsi02G027730.1 vs. TrEMBL
Match: V4ST32_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026803mg PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-18
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 1


Query: 3   SIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDL 62
           S++++  +  L+ G+S A+F +CY  CF++C ITPG  +G+C AKCL DC+F       L
Sbjct: 8   SLLMVYLMTGLLVGQSQAAFKECYETCFIICYITPGTTLGSCAAKCLKDCIF-PPKLHTL 67

Query: 63  DHMDTHYFCKLGCATSLCTKFSTKKDP-GQKISNILVSQVSAC 105
              DT YFCKLGCATSLCT  S+K +P G+K+   + S   +C
Sbjct: 68  SLQDTEYFCKLGCATSLCTNLSSKDNPAGEKVEGCVNSCSKSC 109

[Close]

BLAST of Lsi02G027730.1 vs. NCBI nr
Match: gi|700190113|gb|KGN45346.1| (hypothetical protein Csa_7G446640 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-45
Identity = 88/103 (85.44%), Postives = 98/103 (95.15%), Query Frame = 1


Query: 1   MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           M+S+VLICFILSLVAGRSTASFGKCYAKCF+VCAITPGIP+GTCGAKCLADCLFIASSPM
Sbjct: 1   MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPM 60

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNILVSQVSA 104
           DL++MDTHYFCKLGCATS CTKFSTKKDPG+K+SN  V+  S+
Sbjct: 61  DLNYMDTHYFCKLGCATSRCTKFSTKKDPGKKLSNTSVTTYSS 103

[Close]

BLAST of Lsi02G027730.1 vs. NCBI nr
Match: gi|449470525|ref|XP_004152967.1| (PREDICTED: thionin-like protein 2 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-24
Identity = 60/95 (63.16%), Postives = 70/95 (73.68%), Query Frame = 1


Query: 1  MRSIVLICFILSLVAGRSTA--SFGKCYAKCFVVCAITPGI-PIGTCGAKCLADCLFIAS 60
          MRS+VLICFILSLVAG+STA     KCY  C  VCA+   +  +G C  KC ADC+ IAS
Sbjct: 1  MRSVVLICFILSLVAGKSTAVIEVSKCYLNCMAVCAVPSSLLTVGLCALKCTADCIAIAS 60

Query: 61 SPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQK 93
          SPM+L+ +DT YFCKLGCATS CTK STKKD  +K
Sbjct: 61 SPMNLNRVDTRYFCKLGCATSCCTKSSTKKDFAEK 95

[Close]

BLAST of Lsi02G027730.1 vs. NCBI nr
Match: gi|659131068|ref|XP_008465492.1| (PREDICTED: thionin-like protein 2 [Cucumis melo])

HSP 1 Score: 117.1 bits (292), Expect = 1.9e-23
Identity = 61/95 (64.21%), Postives = 68/95 (71.58%), Query Frame = 1


Query: 1  MRSIVLICFILSLVAGRSTASF--GKCYAKCFVVCAITPGIPI-GTCGAKCLADCLFIAS 60
          MRSIVLI FILSLVAGRST      K + KC   CAI P IP+   C  KC+ADC+ +AS
Sbjct: 1  MRSIVLIHFILSLVAGRSTPVLDTAKWFVKCMAECAILPIIPVVSICAVKCMADCIPVAS 60

Query: 61 SPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQK 93
          SPMDL+ MDTHYFCKLGC T  CTK STKKD  +K
Sbjct: 61 SPMDLNRMDTHYFCKLGCTTYRCTKLSTKKDLAEK 95

[Close]

BLAST of Lsi02G027730.1 vs. NCBI nr
Match: gi|225442677|ref|XP_002284798.1| (PREDICTED: thionin-like protein 2 [Vitis vinifera])

HSP 1 Score: 106.7 bits (265), Expect = 2.6e-20
Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 1


Query: 1   MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           +R++V++  ++ ++ G+STASF  CY KCF+ C ITP     +C  +CL DC+ I S P+
Sbjct: 6   IRALVMVGLVMGMLVGQSTASFKDCYTKCFIFCIITPNNTAFSCSLECLKDCV-IPSHPL 65

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDP-GQKISNILVSQVSAC 105
           D++  DT YFCKLGCA+SLCT  STKK+P G+K+ + + S  + C
Sbjct: 66  DIETADTTYFCKLGCASSLCTNLSTKKNPAGEKVESCVNSCSNKC 109

[Close]

BLAST of Lsi02G027730.1 vs. NCBI nr
Match: gi|147789983|emb|CAN59844.1| (hypothetical protein VITISV_004511 [Vitis vinifera])

HSP 1 Score: 104.8 bits (260), Expect = 9.7e-20
Identity = 48/104 (46.15%), Postives = 71/104 (68.27%), Query Frame = 1


Query: 1   MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           +R++V++  ++ ++ G+STASF  CY KCF+ C ITP     +C  +CL DC+ I S P+
Sbjct: 6   IRALVMVGLVMGMLVGQSTASFKDCYTKCFIFCIITPNNTAFSCSLECLKDCV-IPSHPL 65

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDPGQ---KISNILVSQV 102
           D++  DT YFCKLGCA+ LCT  STKK+PG+   K+   L+ Q+
Sbjct: 66  DIETADTTYFCKLGCASXLCTNLSTKKNPGRESGKLCEFLLKQM 108

The following BLAST results are available for this feature:

BLAST of Lsi02G027730.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi02G027730.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC18_CUCSA	7.2e-46	85.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446640 PE=4 SV=1	[more]
F6HX25_VITVI	1.8e-20	46.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04840 PE=4 SV=...	[more]
A5AWP0_VITVI	6.8e-20	46.15	Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_004511 P...	[more]
A0A061GI20_THECC	2.0e-19	48.54	To encode a PR protein, Belongs to the plant thionin family with the following m...	[more]
V4ST32_9ROSI	1.7e-18	45.63	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026803mg PE=4 SV=1	[more]

BLAST of Lsi02G027730.1 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi02G027730.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700190113\|gb\|KGN45346.1\|	1.0e-45	85.44	hypothetical protein Csa_7G446640 [Cucumis sativus]	[more]
gi\|449470525\|ref\|XP_004152967.1\|	1.3e-24	63.16	PREDICTED: thionin-like protein 2 [Cucumis sativus]	[more]
gi\|659131068\|ref\|XP_008465492.1\|	1.9e-23	64.21	PREDICTED: thionin-like protein 2 [Cucumis melo]	[more]
gi\|225442677\|ref\|XP_002284798.1\|	2.6e-20	46.67	PREDICTED: thionin-like protein 2 [Vitis vinifera]	[more]
gi\|147789983\|emb\|CAN59844.1\|	9.7e-20	46.15	hypothetical protein VITISV_004511 [Vitis vinifera]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi02G027730	Lsi02G027730	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi02G027730.1.CDS.1	Lsi02G027730.1.CDS.1	CDS
Lsi02G027730.1.CDS.2	Lsi02G027730.1.CDS.2	CDS
Lsi02G027730.1.CDS.3	Lsi02G027730.1.CDS.3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi02G027730.1	Lsi02G027730.1-protein	polypeptide